-
2
-
-
26444441397
-
Dating phylogenetically basal Eudicots using rbcL sequences and multiple fossil reference points
-
Anderson CL, Bremer K, Friis EM. 2005. Dating phylogenetically basal Eudicots using rbcL sequences and multiple fossil reference points. American Journal of Botany 92: 1737-1748.
-
(2005)
American Journal of Botany
, vol.92
, pp. 1737-1748
-
-
Anderson, C.L.1
Bremer, K.2
Friis, E.M.3
-
3
-
-
70350218974
-
An update of the angiosperm phylogeny group classification for the orders and families of flowering plants: APG III
-
Angiosperm Phylogeny Group.
-
Angiosperm Phylogeny Group. 2009. An update of the angiosperm phylogeny group classification for the orders and families of flowering plants: APG III. Botanical Journal of the Linnean Society 161: 105-121.
-
(2009)
Botanical Journal of the Linnean Society
, vol.161
, pp. 105-121
-
-
-
6
-
-
0026822377
-
Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae
-
Baldwin BG. 1992. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the Compositae. Molecular Phylogenetics and Evolution 1: 3-16.
-
(1992)
Molecular Phylogenetics and Evolution
, vol.1
, pp. 3-16
-
-
Baldwin, B.G.1
-
7
-
-
0000270001
-
The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny
-
Baldwin BG, Sanderson MJ, Porter JM, Wojciechowski MF, Campbell CS, Donoghue MJ. 1995. The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Annals of the Missouri Botanical Garden 82: 247-277.
-
(1995)
Annals of the Missouri Botanical Garden
, vol.82
, pp. 247-277
-
-
Baldwin, B.G.1
Sanderson, M.J.2
Porter, J.M.3
Wojciechowski, M.F.4
Campbell, C.S.5
Donoghue, M.J.6
-
8
-
-
84859794943
-
Phylogenetics of early branching eudicots: comparing phylogenetic signal across plastid introns, spacers, and genes
-
Barniske A-M, Borsch T, Müller K, Krug M, Worberg A, Neinhuis C, Quandt D. 2012. Phylogenetics of early branching eudicots: comparing phylogenetic signal across plastid introns, spacers, and genes. Journal of Systematics and Evolution 50: 85-108.
-
(2012)
Journal of Systematics and Evolution
, vol.50
, pp. 85-108
-
-
Barniske, A.-M.1
Borsch, T.2
Müller, K.3
Krug, M.4
Worberg, A.5
Neinhuis, C.6
Quandt, D.7
-
11
-
-
84906302932
-
-
Myrtales: molecules, mangroves and Metrosideros. Unpublished D. Phil. Thesis, University of Wisconsin, Madison.
-
Berger B. 2012. Myrtales: molecules, mangroves and Metrosideros. Unpublished D. Phil. Thesis, University of Wisconsin, Madison.
-
(2012)
-
-
Berger, B.1
-
12
-
-
4544308332
-
Phylogenetic relationships and biogeography of Fuchsia (Onagraceae) based on noncoding nuclear and chloroplast DNA data
-
Berry PE, Hahn WJ, Sytsma KJ, Hall JC, Mast A. 2004. Phylogenetic relationships and biogeography of Fuchsia (Onagraceae) based on noncoding nuclear and chloroplast DNA data. American Journal of Botany 91: 601-614.
-
(2004)
American Journal of Botany
, vol.91
, pp. 601-614
-
-
Berry, P.E.1
Hahn, W.J.2
Sytsma, K.J.3
Hall, J.C.4
Mast, A.5
-
13
-
-
0037594762
-
Noncoding plastid trnT-trnF sequences reveal a well resolved phylogeny of basal angiosperms
-
Borsch T, Hilu KW, Quandt D, Wilde V, Neinhuis C, Barthlott W. 2003. Noncoding plastid trnT-trnF sequences reveal a well resolved phylogeny of basal angiosperms. Journal of Evolutionary Biology 16: 558-576.
-
(2003)
Journal of Evolutionary Biology
, vol.16
, pp. 558-576
-
-
Borsch, T.1
Hilu, K.W.2
Quandt, D.3
Wilde, V.4
Neinhuis, C.5
Barthlott, W.6
-
14
-
-
70350411170
-
Mutational dynamics and phylogenetic utility of noncoding chloroplast DNA
-
Borsch T, Quandt D. 2009. Mutational dynamics and phylogenetic utility of noncoding chloroplast DNA. Plant Systematics and Evolution 282: 169-199.
-
(2009)
Plant Systematics and Evolution
, vol.282
, pp. 169-199
-
-
Borsch, T.1
Quandt, D.2
-
15
-
-
79952128500
-
Accommodating heterogeneous rates of evolution in molecular divergence dating methods: an example using intercontinental dispersal of Plestiodon (Eumeces) lizards
-
Brandley MC, Wang Y, Guo X, Nieto Montes De Oca A, Feriaortíz M, Hikida T, Ota H. 2011. Accommodating heterogeneous rates of evolution in molecular divergence dating methods: an example using intercontinental dispersal of Plestiodon (Eumeces) lizards. Systematic Biology 60: 3-15.
-
(2011)
Systematic Biology
, vol.60
, pp. 3-15
-
-
Brandley, M.C.1
Wang, Y.2
Guo, X.3
Nieto Montes De Oca, A.4
Feriaortíz, M.5
Hikida, T.6
Ota, H.7
-
16
-
-
0031035491
-
The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications
-
Buckler ES, Ippolito A, Holtsford TP. 1997. The evolution of ribosomal DNA: divergent paralogues and phylogenetic implications. Genetics 145: 821-832.
-
(1997)
Genetics
, vol.145
, pp. 821-832
-
-
Buckler, E.S.1
Ippolito, A.2
Holtsford, T.P.3
-
18
-
-
0000031660
-
Phylogenetics of seed plants: an analysis of nucleotide sequences from the plastid gene rbcL
-
Chase MW, Soltis DE, Olmstead RG, Morgan D, Les DH, Mishler BD, Duvall MR, Price RA, Hills HG, Qiu YL, Kron KA, Rettig JH, Conti E, Palmer JD, Manhart JR, Sytsma KJ, Michael HJ, Kress WJ, Karol KA, Clark WD, Hedrén M, Gaut BS, Jansen RK, Kim KJ, Wimpee CF, Smith JF, Furnier GR, Strauss SH, Xiang QY, Plunkett GM, Soltis PS, Swensen SM, Williams SE, Gadek PA, Quinn CJ, Eguiarte LE, Golenberg E, Learn GH, Graham SW Jr, Barrett SCH, Dayanandan S, Albert VA. 1993. Phylogenetics of seed plants: an analysis of nucleotide sequences from the plastid gene rbcL. Annals of the Missouri Botanical Garden 80: 528-580.
-
(1993)
Annals of the Missouri Botanical Garden
, vol.80
, pp. 528-580
-
-
Chase, M.W.1
Soltis, D.E.2
Olmstead, R.G.3
Morgan, D.4
Les, D.H.5
Mishler, B.D.6
Duvall, M.R.7
Price, R.A.8
Hills, H.G.9
Qiu, Y.L.10
Kron, K.A.11
Rettig, J.H.12
Conti, E.13
Palmer, J.D.14
Manhart, J.R.15
Sytsma, K.J.16
Michael, H.J.17
Kress, W.J.18
Karol, K.A.19
Clark, W.D.20
Hedrén, M.21
Gaut, B.S.22
Jansen, R.K.23
Kim, K.J.24
Wimpee, C.F.25
Smith, J.F.26
Furnier, G.R.27
Strauss, S.H.28
Xiang, Q.Y.29
Plunkett, G.M.30
Soltis, P.S.31
Swensen, S.M.32
Williams, S.E.33
Gadek, P.A.34
Quinn, C.J.35
Eguiarte, L.E.36
Golenberg, E.37
Learn, G.H.38
Graham Jr, S.W.39
Barrett, S.C.H.40
Dayanandan, S.41
Albert, V.A.42
more..
-
19
-
-
80054822241
-
Diversification in Adeloymia hummingbirds follows Andean uplift
-
Chaves JA, Weir JT, Smith TB. 2011. Diversification in Adeloymia hummingbirds follows Andean uplift. Molecular Ecology 20: 4564-4576.
-
(2011)
Molecular Ecology
, vol.20
, pp. 4564-4576
-
-
Chaves, J.A.1
Weir, J.T.2
Smith, T.B.3
-
20
-
-
0036807292
-
Early Tertiary out-of-India dispersal of Crypteroniaceae: evidence from phylogeny and molecular dating
-
Conti E, Eriksson T, Schönenberger J, Sytsma KJ, Baum DA. 2002. Early Tertiary out-of-India dispersal of Crypteroniaceae: evidence from phylogeny and molecular dating. Evolution 56: 1931-1942.
-
(2002)
Evolution
, vol.56
, pp. 1931-1942
-
-
Conti, E.1
Eriksson, T.2
Schönenberger, J.3
Sytsma, K.J.4
Baum, D.A.5
-
21
-
-
0030061250
-
Circumscription of Myrtales and their relationships to other rosids: evidence from rbcL sequence data
-
Conti E, Litt A, Sytsma KJ. 1996. Circumscription of Myrtales and their relationships to other rosids: evidence from rbcL sequence data. American Journal of Botany 83: 221-233.
-
(1996)
American Journal of Botany
, vol.83
, pp. 221-233
-
-
Conti, E.1
Litt, A.2
Sytsma, K.J.3
-
22
-
-
0031432593
-
Interfamilial relationships in Myrtales: molecular phylogeny and patterns of morphological evolution
-
Conti E, Litt A, Wilson PG, Graham SA, Briggs BG, Johnson LAS, Sytsma KJ. 1997. Interfamilial relationships in Myrtales: molecular phylogeny and patterns of morphological evolution. Systematic Botany 22: 629-647.
-
(1997)
Systematic Botany
, vol.22
, pp. 629-647
-
-
Conti, E.1
Litt, A.2
Wilson, P.G.3
Graham, S.A.4
Briggs, B.G.5
Johnson, L.A.S.6
Sytsma, K.J.7
-
23
-
-
4344571842
-
Calibration of molecular clocks and the biogeographic history of Crypteroniaceae: a reply to Moyle
-
Conti E, Rutschmann F, Eriksson T, Sytsma KJ, Baum DA. 2004. Calibration of molecular clocks and the biogeographic history of Crypteroniaceae: a reply to Moyle. Evolution 58: 1874-1876.
-
(2004)
Evolution
, vol.58
, pp. 1874-1876
-
-
Conti, E.1
Rutschmann, F.2
Eriksson, T.3
Sytsma, K.J.4
Baum, D.A.5
-
24
-
-
84862906885
-
Systematics Agenda 2020: the mission evolves
-
Daly M, Herendeen PS, Guralnick RP, Westneat MW, McDade L. 2012. Systematics Agenda 2020: the mission evolves. Systematic Biology 61: 549-552.
-
(2012)
Systematic Biology
, vol.61
, pp. 549-552
-
-
Daly, M.1
Herendeen, P.S.2
Guralnick, R.P.3
Westneat, M.W.4
McDade, L.5
-
25
-
-
34548057478
-
Explosive radiation of Malpighiales supports a mid-Cretaceous origin of modern tropical rain forests
-
Davis CC, Webb CO, Wurdack KJ, Jaramillo CA, Donoghue MJ. 2005. Explosive radiation of Malpighiales supports a mid-Cretaceous origin of modern tropical rain forests. American Naturalist 165: 36-65.
-
(2005)
American Naturalist
, vol.165
, pp. 36-65
-
-
Davis, C.C.1
Webb, C.O.2
Wurdack, K.J.3
Jaramillo, C.A.4
Donoghue, M.J.5
-
26
-
-
34447333669
-
Rocks and clocks: calibrating the Tree of Life using fossils and molecules
-
Donoghue PCJ, Benton MJ. 2007. Rocks and clocks: calibrating the Tree of Life using fossils and molecules. Trends in Ecology and Evolution 22: 424-431.
-
(2007)
Trends in Ecology and Evolution
, vol.22
, pp. 424-431
-
-
Donoghue, P.C.J.1
Benton, M.J.2
-
27
-
-
84855870606
-
Relaxed clocks and inferences of heterogeneous patterns of nucleotide substitution and divergence time estimates across whales and dolphins (Mammalia: Cetacea)
-
Dornburg A, Brandley MC, McGowen MR, Near TJ. 2012. Relaxed clocks and inferences of heterogeneous patterns of nucleotide substitution and divergence time estimates across whales and dolphins (Mammalia: Cetacea). Molecular Biology and Evolution 29: 721-736.
-
(2012)
Molecular Biology and Evolution
, vol.29
, pp. 721-736
-
-
Dornburg, A.1
Brandley, M.C.2
McGowen, M.R.3
Near, T.J.4
-
28
-
-
84884549736
-
Lost branches on the Tree of Life
-
Drew BT, Gazis R. Cabezas P, Swithers KS, Deng J, Rodriguez R, Katz LA, Crandall KA, Hibbett DS, Soltis DE. 2013. Lost branches on the Tree of Life. PLoS Biology 11: e1001636.
-
(2013)
PLoS Biology
, vol.11
-
-
Drew, B.T.1
Gazis, R.2
Cabezas, P.3
Swithers, K.S.4
Deng, J.5
Rodriguez, R.6
Katz, L.A.7
Crandall, K.A.8
Hibbett, D.S.9
Soltis, D.E.10
-
29
-
-
84871207569
-
The South American radiation of Lepechinia (Lamiaceae): phylogenetics, divergence times and evolution of dioecy
-
Drew BT, Sytsma KJ. 2013. The South American radiation of Lepechinia (Lamiaceae): phylogenetics, divergence times and evolution of dioecy. Botanical Journal of the Linnean Society 171: 171-190.
-
(2013)
Botanical Journal of the Linnean Society
, vol.171
, pp. 171-190
-
-
Drew, B.T.1
Sytsma, K.J.2
-
31
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A. 2007. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evolutionary Biology 7: 214.
-
(2007)
BMC Evolutionary Biology
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
33
-
-
84860139764
-
Multiple continental radiations and correlates of diversification in Lupinus (Leguminosae): testing for key innovation with incomplete taxon sampling
-
Drummond CS, Eastwood RJ, Miotto STS, Hughes CE. 2012b. Multiple continental radiations and correlates of diversification in Lupinus (Leguminosae): testing for key innovation with incomplete taxon sampling. Systematic Biology 61: 443-460.
-
(2012)
Systematic Biology
, vol.61
, pp. 443-460
-
-
Drummond, C.S.1
Eastwood, R.J.2
Miotto, S.T.S.3
Hughes, C.E.4
-
34
-
-
61849115722
-
Climate, niche evolution, and diversification of the 'bird-cage' evening primroses (Oenothera, sections Anogra and Kleinia)
-
Evans MEK, Smith SA, Flynn RS, Donoghue MJ. 2009. Climate, niche evolution, and diversification of the 'bird-cage' evening primroses (Oenothera, sections Anogra and Kleinia). The American Naturalist 173: 225-240.
-
(2009)
The American Naturalist
, vol.173
, pp. 225-240
-
-
Evans, M.E.K.1
Smith, S.A.2
Flynn, R.S.3
Donoghue, M.J.4
-
35
-
-
84873740652
-
Exploring the impact of fossil constraints on the divergence time estimates of derived liverworts
-
Feldberg K, Heinrichs J, Schmidt AR, Váňa J, Schneider H. 2013. Exploring the impact of fossil constraints on the divergence time estimates of derived liverworts. Plant Systematics and Evolution 299: 585-601.
-
(2013)
Plant Systematics and Evolution
, vol.299
, pp. 585-601
-
-
Feldberg, K.1
Heinrichs, J.2
Schmidt, A.R.3
Váňa, J.4
Schneider, H.5
-
36
-
-
45749118420
-
Phylogeny and historical biogeography of Geraniaceae in relation to climate changes and pollination ecology
-
Fiz O, Vargas P, Alarcón M, Aedo C, García JL, Aldasoro JJ. 2008. Phylogeny and historical biogeography of Geraniaceae in relation to climate changes and pollination ecology. Systematic Botany 33: 326-342.
-
(2008)
Systematic Botany
, vol.33
, pp. 326-342
-
-
Fiz, O.1
Vargas, P.2
Alarcón, M.3
Aedo, C.4
García, J.L.5
Aldasoro, J.J.6
-
37
-
-
33847762254
-
Phylogenetic relationships and evolution in Erodium (Geraniaceae) based on trnL-trnF sequences
-
Fiz O, Vargas P, Alarcón M, Aldasoro JJ. 2006. Phylogenetic relationships and evolution in Erodium (Geraniaceae) based on trnL-trnF sequences. Systematic Botany 31: 739-763.
-
(2006)
Systematic Botany
, vol.31
, pp. 739-763
-
-
Fiz, O.1
Vargas, P.2
Alarcón, M.3
Aldasoro, J.J.4
-
38
-
-
78649536565
-
The uneven phylogeny and biogeography of Erodium (Geraniaceae): radiations in the Mediterranean and recent recurrent intercontinental colonization
-
Fiz-Palacios O, Vargas P, Vila R, Papadopulos AST, Aldasoro JJ. 2010. The uneven phylogeny and biogeography of Erodium (Geraniaceae): radiations in the Mediterranean and recent recurrent intercontinental colonization. Annals of Botany 106: 871-884.
-
(2010)
Annals of Botany
, vol.106
, pp. 871-884
-
-
Fiz-Palacios, O.1
Vargas, P.2
Vila, R.3
Papadopulos, A.S.T.4
Aldasoro, J.J.5
-
39
-
-
70349599032
-
Calibrating the Tree of Life: fossils, molecules and evolutionary timescales
-
Forest F. 2009. Calibrating the Tree of Life: fossils, molecules and evolutionary timescales. Annals of Botany 104: 789-794.
-
(2009)
Annals of Botany
, vol.104
, pp. 789-794
-
-
Forest, F.1
-
40
-
-
0001755204
-
Upper Cretaceous (Senonian) floral structures of juglandalean affinity containing Normapolles pollen
-
Friis EM. 1983. Upper Cretaceous (Senonian) floral structures of juglandalean affinity containing Normapolles pollen. Review of Palaeobotany and Palynology 39: 161-188.
-
(1983)
Review of Palaeobotany and Palynology
, vol.39
, pp. 161-188
-
-
Friis, E.M.1
-
42
-
-
4944224427
-
Ancient vicariance or recent long-distance dispersal? Inferences about phylogeny and South American-African disjunctions in Rapateaceae and Bromeliaceae based on ndhF sequence data
-
Givnish T, Millam K, Evans T, Hall J, Chris Pires J, Berry P, Sytsma K. 2004. Ancient vicariance or recent long-distance dispersal? Inferences about phylogeny and South American-African disjunctions in Rapateaceae and Bromeliaceae based on ndhF sequence data. International Journal of Plant Sciences 165: 35-54.
-
(2004)
International Journal of Plant Sciences
, vol.165
, pp. 35-54
-
-
Givnish, T.1
Millam, K.2
Evans, T.3
Hall, J.4
Chris Pires, J.5
Berry, P.6
Sytsma, K.7
-
43
-
-
84863337850
-
Phylogeny, adaptive radiation, and historical biogeography in Bromeliaceae: insights from an eight-locus plastid phylogeny
-
Givnish TJ, Barfuss MHJ, Ee BV, Riina R, Schulte K, Horres R, Gonsiska PA, Jabaily RS, Crayn DM, Smith JAC, Winter K, Brown GK, Evans TM, Holst BK, Luther H, Till W, Zizka G, Berry GE, Sytsma KJ. 2011. Phylogeny, adaptive radiation, and historical biogeography in Bromeliaceae: insights from an eight-locus plastid phylogeny. American Journal of Botany 98: 872-895.
-
(2011)
American Journal of Botany
, vol.98
, pp. 872-895
-
-
Givnish, T.J.1
Barfuss, M.H.J.2
Ee, B.V.3
Riina, R.4
Schulte, K.5
Horres, R.6
Gonsiska, P.A.7
Jabaily, R.S.8
Crayn, D.M.9
Smith, J.A.C.10
Winter, K.11
Brown, G.K.12
Evans, T.M.13
Holst, B.K.14
Luther, H.15
Till, W.16
Zizka, G.17
Berry, G.E.18
Sytsma, K.J.19
-
44
-
-
84889578942
-
Adaptive radiation, correlated and contingent evolution, and net species diversification in Bromeliaceae
-
Givnish TJ, Barfuss MHJ, Van Ee B, Riina R, Schulte K, Horres R, Gonsiska PA, Jabaily RS, Crayn DM, Smith JAC, Winter K, Brown GK, Evans TM, Holst BK, Luther H, Till W, Zizka G, Berry PE, Sytsma KJ. 2014. Adaptive radiation, correlated and contingent evolution, and net species diversification in Bromeliaceae. Molecular Phylogenetics and Evolution 71: 55-78.
-
(2014)
Molecular Phylogenetics and Evolution
, vol.71
, pp. 55-78
-
-
Givnish, T.J.1
Barfuss, M.H.J.2
Van Ee, B.3
Riina, R.4
Schulte, K.5
Horres, R.6
Gonsiska, P.A.7
Jabaily, R.S.8
Crayn, D.M.9
Smith, J.A.C.10
Winter, K.11
Brown, G.K.12
Evans, T.M.13
Holst, B.K.14
Luther, H.15
Till, W.16
Zizka, G.17
Berry, P.E.18
Sytsma, K.J.19
-
45
-
-
0034496721
-
Molecular evolution, adaptive radiation, and geographic diversification in the amphiatlantic family Rapateaceae: evidence from ndhF sequences and morphology
-
Givnish TJ, Evans TM, Zjhra ML, Patterson TB, Berry PE, Sytsma KJ. 2000. Molecular evolution, adaptive radiation, and geographic diversification in the amphiatlantic family Rapateaceae: evidence from ndhF sequences and morphology. Evolution 54: 1915-1937.
-
(2000)
Evolution
, vol.54
, pp. 1915-1937
-
-
Givnish, T.J.1
Evans, T.M.2
Zjhra, M.L.3
Patterson, T.B.4
Berry, P.E.5
Sytsma, K.J.6
-
46
-
-
58149121740
-
Origin, adaptive radiation and diversification of the Hawaiian lobeliads (Asterales: Campanulaceae)
-
Givnish TJ, Millam KC, Mast AR, Paterson TB, Theim TJ, Hipp AL, Henss JM, Smith JF, Wood KR, Sytsma KJ. 2009. Origin, adaptive radiation and diversification of the Hawaiian lobeliads (Asterales: Campanulaceae). Proceedings of the Royal Society of London-B-Biological Sciences Proceedings 276: 407-416.
-
(2009)
Proceedings of the Royal Society of London-B-Biological Sciences Proceedings
, vol.276
, pp. 407-416
-
-
Givnish, T.J.1
Millam, K.C.2
Mast, A.R.3
Paterson, T.B.4
Theim, T.J.5
Hipp, A.L.6
Henss, J.M.7
Smith, J.F.8
Wood, K.R.9
Sytsma, K.J.10
-
47
-
-
70350520508
-
The Andes: a geological overview from a biological perspective
-
Graham A. 2009. The Andes: a geological overview from a biological perspective. Annals of the Missouri Botanical Garden 96: 371-385.
-
(2009)
Annals of the Missouri Botanical Garden
, vol.96
, pp. 371-385
-
-
Graham, A.1
-
49
-
-
0033679542
-
Microstructural changes in noncoding chloroplast DNA: interpretation, evolution, and utility of indels and inversions in basal angiosperm phylogenetic inference
-
Graham SW, Reeves PA, Burns ACE, Olmstead RG. 2000. Microstructural changes in noncoding chloroplast DNA: interpretation, evolution, and utility of indels and inversions in basal angiosperm phylogenetic inference. International Journal of Plant Sciences 161: S83-S96.
-
(2000)
International Journal of Plant Sciences
, vol.161
-
-
Graham, S.W.1
Reeves, P.A.2
Burns, A.C.E.3
Olmstead, R.G.4
-
50
-
-
57449097796
-
Genome-wide analyses of Geraniaceae plastid DNA reveal unprecedented patterns of increased nucleotide substitutions
-
Guisinger MM, Kuehl JV, Boore JL, Jansen RK. 2008. Genome-wide analyses of Geraniaceae plastid DNA reveal unprecedented patterns of increased nucleotide substitutions. Proceedings of the National Academy of Sciences 105: 18424-18429.
-
(2008)
Proceedings of the National Academy of Sciences
, vol.105
, pp. 18424-18429
-
-
Guisinger, M.M.1
Kuehl, J.V.2
Boore, J.L.3
Jansen, R.K.4
-
51
-
-
78650446228
-
Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage
-
Guisinger MM, Kuehl JV, Boore JL, Jansen RK. 2011. Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage. Molecular Biology and Evolution 28: 583-600.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 583-600
-
-
Guisinger, M.M.1
Kuehl, J.V.2
Boore, J.L.3
Jansen, R.K.4
-
52
-
-
84876493763
-
Inferring the biogeographic origins of inter-continental disjunct endemics using a Bayes-DIVA approach
-
Harris AJ, Wen J, Xiang Q-YJ. 2013. Inferring the biogeographic origins of inter-continental disjunct endemics using a Bayes-DIVA approach. Journal of Systematics and Evolution 51: 117-133.
-
(2013)
Journal of Systematics and Evolution
, vol.51
, pp. 117-133
-
-
Harris, A.J.1
Wen, J.2
Xiang, Q.-Y.3
-
54
-
-
76649087986
-
Constraints on clade ages from fossil outgroups
-
Hedman MM. 2010. Constraints on clade ages from fossil outgroups. Paleobiology 36: 16-31.
-
(2010)
Paleobiology
, vol.36
, pp. 16-31
-
-
Hedman, M.M.1
-
55
-
-
84555188625
-
Calibrated tree priors for relaxed phylogenetics and divergence time estimation
-
Heled J, Drummond AJ. 2012. Calibrated tree priors for relaxed phylogenetics and divergence time estimation. Systematic Biology 61: 138-149.
-
(2012)
Systematic Biology
, vol.61
, pp. 138-149
-
-
Heled, J.1
Drummond, A.J.2
-
56
-
-
0002185481
-
An Upper Senonian pollen assemblage of borehole 3-PIA-10-AL state of Alagoas, Brazil
-
Herngreen GFW. 1975. An Upper Senonian pollen assemblage of borehole 3-PIA-10-AL state of Alagoas, Brazil. Pollen Spores 17: 93-140.
-
(1975)
Pollen Spores
, vol.17
, pp. 93-140
-
-
Herngreen, G.F.W.1
-
57
-
-
33748030523
-
Phylogeny of Chaetanthera (Asteraceae: Mutisieae) reveals both ancient and recent origins of the high elevation lineages
-
Hershkovitz MA, Arroyo MT, Bell C, Hinojosa LF. 2006. Phylogeny of Chaetanthera (Asteraceae: Mutisieae) reveals both ancient and recent origins of the high elevation lineages. Molecular Phylogenetics and Evolution 41: 594-605.
-
(2006)
Molecular Phylogenetics and Evolution
, vol.41
, pp. 594-605
-
-
Hershkovitz, M.A.1
Arroyo, M.T.2
Bell, C.3
Hinojosa, L.F.4
-
58
-
-
34347329101
-
Calibrating molecular estimates of substitution rates and divergence times in birds
-
Ho SYW. 2007. Calibrating molecular estimates of substitution rates and divergence times in birds. Journal of Avian Biology 38: 409-414.
-
(2007)
Journal of Avian Biology
, vol.38
, pp. 409-414
-
-
Ho, S.Y.W.1
-
59
-
-
70350103638
-
Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times
-
Ho SYW, Phillips MJ. 2009. Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times. Systematic Biology 58: 367-380.
-
(2009)
Systematic Biology
, vol.58
, pp. 367-380
-
-
Ho, S.Y.W.1
Phillips, M.J.2
-
60
-
-
78149375687
-
Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity
-
Hoorn C, Wesselingh FP, Steege H, Bermudez MA, Mora A, Sevink J, Sanmartín I, Sanchez-Meseguer A, Anderson CL, Figueiredo JP, Jaramillo C, Riff D, Negri FR, Hooghiemstra H, Lundberg J, Stadler T, Särkinen T, Antonelli A. 2010. Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science 330: 927-931.
-
(2010)
Science
, vol.330
, pp. 927-931
-
-
Hoorn, C.1
Wesselingh, F.P.2
Steege, H.3
Bermudez, M.A.4
Mora, A.5
Sevink, J.6
Sanmartín, I.7
Sanchez-Meseguer, A.8
Anderson, C.L.9
Figueiredo, J.P.10
Jaramillo, C.11
Riff, D.12
Negri, F.R.13
Hooghiemstra, H.14
Lundberg, J.15
Stadler, T.16
Särkinen, T.17
Antonelli, A.18
-
61
-
-
34547465760
-
Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1
-
Hugall AF, Foster R, Lee MSY. 2007. Calibration choice, rate smoothing, and the pattern of tetrapod diversification according to the long nuclear gene RAG-1. Systematic Biology 56: 543-563.
-
(2007)
Systematic Biology
, vol.56
, pp. 543-563
-
-
Hugall, A.F.1
Foster, R.2
Lee, M.S.Y.3
-
62
-
-
72049121650
-
The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times
-
Inoue J, Donoghue PCJ, Yang Z. 2009. The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times. Systematic Biology 59: 74-89.
-
(2009)
Systematic Biology
, vol.59
, pp. 74-89
-
-
Inoue, J.1
Donoghue, P.C.J.2
Yang, Z.3
-
63
-
-
76349122243
-
Phylogenetics of Puya (Bromeliaceae): placement, major lineages, and evolution of Chilean species
-
Jabaily RS, Sytsma KJ. 2010. Phylogenetics of Puya (Bromeliaceae): placement, major lineages, and evolution of Chilean species. American Journal of Botany 97: 337-356.
-
(2010)
American Journal of Botany
, vol.97
, pp. 337-356
-
-
Jabaily, R.S.1
Sytsma, K.J.2
-
64
-
-
84871197184
-
Historical biogeography and life history evolution of Andean Puya (Bromeliaceae)
-
Jabaily RS, Sytsma KJ. 2013. Historical biogeography and life history evolution of Andean Puya (Bromeliaceae). Botanical Journal of the Linnean Society 171: 201-224.
-
(2013)
Botanical Journal of the Linnean Society
, vol.171
, pp. 201-224
-
-
Jabaily, R.S.1
Sytsma, K.J.2
-
65
-
-
84880111355
-
Phylogenetic influences on leaf trait integration in Pelargonium (Geraniaceae): convergence, divergence, and historical adaptation to a rapidly changing climate
-
Jones CS, Martinez-Cabrera HI, Nicotra AB, Mocko K, Marais EM, Schlichting CD. 2013. Phylogenetic influences on leaf trait integration in Pelargonium (Geraniaceae): convergence, divergence, and historical adaptation to a rapidly changing climate. American Journal of Botany 100: 1306-1321.
-
(2013)
American Journal of Botany
, vol.100
, pp. 1306-1321
-
-
Jones, C.S.1
Martinez-Cabrera, H.I.2
Nicotra, A.B.3
Mocko, K.4
Marais, E.M.5
Schlichting, C.D.6
-
66
-
-
0037100671
-
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research 30: 3059-3066.
-
(2002)
Nucleic Acids Research
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
67
-
-
82455166760
-
Synthesizing and databasing fossil calibrations: divergence dating and beyond
-
Ksepka DT, Benton MJ, Carrano MT, Gandolfo MA, Head JJ, Hermsen EJ, Joyce WG, Lamm KS, Patane JSL, Phillips MJ, Polly PD, Van Tuinen M, Ware JL, Warnock RCM, Parham JF. 2011. Synthesizing and databasing fossil calibrations: divergence dating and beyond. Biology Letters 7: 801-803.
-
(2011)
Biology Letters
, vol.7
, pp. 801-803
-
-
Ksepka, D.T.1
Benton, M.J.2
Carrano, M.T.3
Gandolfo, M.A.4
Head, J.J.5
Hermsen, E.J.6
Joyce, W.G.7
Lamm, K.S.8
Patane, J.S.L.9
Phillips, M.J.10
Polly, P.D.11
Van Tuinen, M.12
Ware, J.L.13
Warnock, R.C.M.14
Parham, J.F.15
-
68
-
-
1342266231
-
Paraphyly in tribe Onagreae: insights into phylogenetic relationships of Onagraceae based on nuclear and chloroplast sequence data
-
Levin RA, Wagner WL, Hoch PC, Hahn WJ, Rodriguez A, Baum DA, Katinas L, Zimmer EA, Sytsma KJ. 2004. Paraphyly in tribe Onagreae: insights into phylogenetic relationships of Onagraceae based on nuclear and chloroplast sequence data. Systematic Botany 29: 147-164.
-
(2004)
Systematic Botany
, vol.29
, pp. 147-164
-
-
Levin, R.A.1
Wagner, W.L.2
Hoch, P.C.3
Hahn, W.J.4
Rodriguez, A.5
Baum, D.A.6
Katinas, L.7
Zimmer, E.A.8
Sytsma, K.J.9
-
69
-
-
0242573359
-
Family-level relationships of Onagraceae based on chloroplast rbcL and ndhF data
-
Levin RA, Wagner WL, Hoch PC, Nepokroeff M, Pires JC, Zimmer EA, Sytsma KJ. 2003. Family-level relationships of Onagraceae based on chloroplast rbcL and ndhF data. American Journal of Botany 90: 107-115.
-
(2003)
American Journal of Botany
, vol.90
, pp. 107-115
-
-
Levin, R.A.1
Wagner, W.L.2
Hoch, P.C.3
Nepokroeff, M.4
Pires, J.C.5
Zimmer, E.A.6
Sytsma, K.J.7
-
71
-
-
79960613884
-
Diversification in the Andes: age and origins of South American Heliotropium lineages (Heliotropiaceae, Boraginales)
-
Luebert F, Hilger HH, Weigend M. 2011. Diversification in the Andes: age and origins of South American Heliotropium lineages (Heliotropiaceae, Boraginales). Molecular Phylogenetics and Evolution 61: 90-102.
-
(2011)
Molecular Phylogenetics and Evolution
, vol.61
, pp. 90-102
-
-
Luebert, F.1
Hilger, H.H.2
Weigend, M.3
-
72
-
-
85008827456
-
Palynostratigraphy of the Murray Basin, inland Southeastern Australia
-
Macphail MK. 1999. Palynostratigraphy of the Murray Basin, inland Southeastern Australia. Palynology 23: 197-240.
-
(1999)
Palynology
, vol.23
, pp. 197-240
-
-
Macphail, M.K.1
-
73
-
-
4944255292
-
Dating lineages: molecular and paleontological approaches to the temporal framework of clades
-
Magallón S. 2004. Dating lineages: molecular and paleontological approaches to the temporal framework of clades. International Journal of Plant Sciences 165: 7-21.
-
(2004)
International Journal of Plant Sciences
, vol.165
, pp. 7-21
-
-
Magallón, S.1
-
74
-
-
77953773178
-
Using fossils to break long branches in molecular dating: a comparison of relaxed clocks applied to the origin of angiosperms
-
Magallón S. 2010. Using fossils to break long branches in molecular dating: a comparison of relaxed clocks applied to the origin of angiosperms. Systematic Biology 59: 384-399.
-
(2010)
Systematic Biology
, vol.59
, pp. 384-399
-
-
Magallón, S.1
-
76
-
-
84874918225
-
Land plant evolutionary timeline: gene effects are secondary to fossil constraints in relaxed clock estimation of age and substitution rates
-
Magallón S, Hilu KW, Quandt D. 2013. Land plant evolutionary timeline: gene effects are secondary to fossil constraints in relaxed clock estimation of age and substitution rates. American Journal of Botany 100: 556-573.
-
(2013)
American Journal of Botany
, vol.100
, pp. 556-573
-
-
Magallón, S.1
Hilu, K.W.2
Quandt, D.3
-
77
-
-
24644519796
-
Angiosperm divergence times: the effect of genes, codon positions and time constraints
-
Magallón S, Sanderson MJ. 2005. Angiosperm divergence times: the effect of genes, codon positions and time constraints. Evolution 59: 1653-1670.
-
(2005)
Evolution
, vol.59
, pp. 1653-1670
-
-
Magallón, S.1
Sanderson, M.J.2
-
78
-
-
43949092742
-
A simple method for bracketing absolute divergence times on molecular phylogenies using multiple fossil calibration points
-
Marshall CR. 2008. A simple method for bracketing absolute divergence times on molecular phylogenies using multiple fossil calibration points. The American Naturalist 171: 726-742.
-
(2008)
The American Naturalist
, vol.171
, pp. 726-742
-
-
Marshall, C.R.1
-
80
-
-
78650931246
-
Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays
-
McCormack JE, Heled J, Delaney KS, Peterson AT, Knowles LL. 2010. Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays. Evolution 65: 184-202.
-
(2010)
Evolution
, vol.65
, pp. 184-202
-
-
McCormack, J.E.1
Heled, J.2
Delaney, K.S.3
Peterson, A.T.4
Knowles, L.L.5
-
81
-
-
33845242233
-
Fossil pollen records of extant angiosperms
-
Muller J. 1981. Fossil pollen records of extant angiosperms. Botanical Review 47: 1-142.
-
(1981)
Botanical Review
, vol.47
, pp. 1-142
-
-
Muller, J.1
-
82
-
-
33748594712
-
Phylogenetic utility of rapidly evolving DNA at high taxonomical levels: contrasting matK, trnT-F, and rbcL in basal angiosperms
-
Müller KF, Borsch T, Hilu KW. 2006. Phylogenetic utility of rapidly evolving DNA at high taxonomical levels: contrasting matK, trnT-F, and rbcL in basal angiosperms. Molecular Phylogenetics and Evolution 41: 99-117.
-
(2006)
Molecular Phylogenetics and Evolution
, vol.41
, pp. 99-117
-
-
Müller, K.F.1
Borsch, T.2
Hilu, K.W.3
-
83
-
-
84864836077
-
First Miocene fossils of Vivianiaceae shed new light on phylogeny, divergence times, and historical biogeography of Geraniales
-
Palazzesi L, Gottschling M, Barreda V, Weigend M. 2012. First Miocene fossils of Vivianiaceae shed new light on phylogeny, divergence times, and historical biogeography of Geraniales. Biological Journal of the Linnean Society 107: 67-85.
-
(2012)
Biological Journal of the Linnean Society
, vol.107
, pp. 67-85
-
-
Palazzesi, L.1
Gottschling, M.2
Barreda, V.3
Weigend, M.4
-
84
-
-
84863116561
-
Best practices for justifying fossil calibrations
-
Parham JF, Donoghue PCJ, Bell CJ, Calway TD, Head JJ, Holroyd PA, Inoue JG, Irmis RB, Joyce WG, Ksepka DT, Patane JSL, Smith ND, Tarver JE, Van Tuinen M, Yang Z, Angielczyk KD, Greenwood JM, Hipsley CA, Jacobs L, Makovicky PJ, Muller J, Smith KT, Theodor JM, Warnock RCM, Benton MJ. 2012. Best practices for justifying fossil calibrations. Systematic Biology 61: 346-359.
-
(2012)
Systematic Biology
, vol.61
, pp. 346-359
-
-
Parham, J.F.1
Donoghue, P.C.J.2
Bell, C.J.3
Calway, T.D.4
Head, J.J.5
Holroyd, P.A.6
Inoue, J.G.7
Irmis, R.B.8
Joyce, W.G.9
Ksepka, D.T.10
Patane, J.S.L.11
Smith, N.D.12
Tarver, J.E.13
Van Tuinen, M.14
Yang, Z.15
Angielczyk, K.D.16
Greenwood, J.M.17
Hipsley, C.A.18
Jacobs, L.19
Makovicky, P.J.20
Muller, J.21
Smith, K.T.22
Theodor, J.M.23
Warnock, R.C.M.24
Benton, M.J.25
more..
-
85
-
-
67349118917
-
Branch-length estimation bias misleads molecular dating for a vertebrate mitochondrial phylogeny
-
Phillips MJ. 2009. Branch-length estimation bias misleads molecular dating for a vertebrate mitochondrial phylogeny. Gene 441: 132-140.
-
(2009)
Gene
, vol.441
, pp. 132-140
-
-
Phillips, M.J.1
-
87
-
-
0002314895
-
Fragmentation of Gondwana: the separation of Africa from South America
-
Goldblatt P, ed. New Haven, CT: Yale University Press
-
Pittman III WC, Cande S, LaBrecque J, Pindell J. 1993. Fragmentation of Gondwana: the separation of Africa from South America. In: Goldblatt P, ed. Biological relationships between Africa and South America. New Haven, CT: Yale University Press, 15-34.
-
(1993)
Biological relationships between Africa and South America
, pp. 15-34
-
-
Pittman III, W.C.1
Cande, S.2
LaBrecque, J.3
Pindell, J.4
-
88
-
-
77953147755
-
Nuclear ribosomal spacer regions in plant phylogenetics: problems and prospects
-
Poczai P, Hyvönen J. 2009. Nuclear ribosomal spacer regions in plant phylogenetics: problems and prospects. Molecular Biology Reports 37: 1897-1912.
-
(2009)
Molecular Biology Reports
, vol.37
, pp. 1897-1912
-
-
Poczai, P.1
Hyvönen, J.2
-
89
-
-
78649548084
-
Angiosperm phylogeny inferred from sequences of four mitochondrial genes
-
Qiu YL, Lin L, Wang B, Xue BY, Hendry TA, Li RQ, Brown JW, Liu Y, Hudson GT, Chen ZD. 2010. Angiosperm phylogeny inferred from sequences of four mitochondrial genes. Journal of Systematics and Evolution 48: 391-425.
-
(2010)
Journal of Systematics and Evolution
, vol.48
, pp. 391-425
-
-
Qiu, Y.L.1
Lin, L.2
Wang, B.3
Xue, B.Y.4
Hendry, T.A.5
Li, R.Q.6
Brown, J.W.7
Liu, Y.8
Hudson, G.T.9
Chen, Z.D.10
-
90
-
-
4944228956
-
Molecular evolution of the chloroplast trnL-F region in land plants
-
Quandt D, Müller K, Stech M, Hilu KW, Frey W, Frahm J-P, Borsch T. 2004. Molecular evolution of the chloroplast trnL-F region in land plants. Monographs in Systematic Botany from the Missouri Botanical Garden 98: 13-37.
-
(2004)
Monographs in Systematic Botany from the Missouri Botanical Garden
, vol.98
, pp. 13-37
-
-
Quandt, D.1
Müller, K.2
Stech, M.3
Hilu, K.W.4
Frey, W.5
Frahm, J.-P.6
Borsch, T.7
-
91
-
-
84906302923
-
-
Tracer version 1.5. Computer program and documentation distributed by the authors, Available at
-
Rambaut A, Drummond AJ. 2009. Tracer version 1.5. Computer program and documentation distributed by the authors, Available at: http://beast.bio.ed.ac.uk/Tracer
-
(2009)
-
-
Rambaut, A.1
Drummond, A.J.2
-
92
-
-
4944250824
-
Plant dispersal across the tropical Atlantic by wind and sea currents
-
Renner S. 2004. Plant dispersal across the tropical Atlantic by wind and sea currents. International Journal of Plant Sciences 165: 23-33.
-
(2004)
International Journal of Plant Sciences
, vol.165
, pp. 23-33
-
-
Renner, S.1
-
93
-
-
27644548127
-
Relaxed molecular clocks for dating historical plant dispersal events
-
Renner SS. 2005. Relaxed molecular clocks for dating historical plant dispersal events. Trends in Plant Science 10: 550-558.
-
(2005)
Trends in Plant Science
, vol.10
, pp. 550-558
-
-
Renner, S.S.1
-
94
-
-
0000685649
-
Historical biogeography of Melastomataceae: the roles of Tertiary migration and long-distance dispersal
-
Renner SS, Clausing G, Meyer K. 2001. Historical biogeography of Melastomataceae: the roles of Tertiary migration and long-distance dispersal. American Journal of Botany 88: 1290-1300.
-
(2001)
American Journal of Botany
, vol.88
, pp. 1290-1300
-
-
Renner, S.S.1
Clausing, G.2
Meyer, K.3
-
95
-
-
33645030825
-
Molecular dating of phylogenetic trees: a brief review of current methods that estimate divergence times
-
Rutschmann F. 2006. Molecular dating of phylogenetic trees: a brief review of current methods that estimate divergence times. Diversity and Distributions 12: 35-48.
-
(2006)
Diversity and Distributions
, vol.12
, pp. 35-48
-
-
Rutschmann, F.1
-
96
-
-
0030773749
-
A nonparametric approach to estimating divergence times in the absence of rate constancy
-
Sanderson MJ. 1997. A nonparametric approach to estimating divergence times in the absence of rate constancy. Molecular Biology and Evolution 14: 1218-1231.
-
(1997)
Molecular Biology and Evolution
, vol.14
, pp. 1218-1231
-
-
Sanderson, M.J.1
-
97
-
-
0001002014
-
Estimating rate and time in molecular phylogenies: beyond the molecular clock?
-
Soltis P, Soltis D, Doyle J, eds., 2nd edn. London: Chapman and Hall
-
Sanderson MJ. 1998. Estimating rate and time in molecular phylogenies: beyond the molecular clock? In: Soltis P, Soltis D, Doyle J, eds. Plant molecular systematics, 2nd edn. London: Chapman and Hall, 242-264.
-
(1998)
Plant molecular systematics
, pp. 242-264
-
-
Sanderson, M.J.1
-
98
-
-
0036135468
-
Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach
-
Sanderson MJ. 2002. Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Molecular Biology and Evolution 19: 101-109.
-
(2002)
Molecular Biology and Evolution
, vol.19
, pp. 101-109
-
-
Sanderson, M.J.1
-
99
-
-
84863116093
-
Testing the impact of calibration on molecular divergence times using a fossil-rich group: the case of Nothofagus (Fagales)
-
Sauquet H, Ho SYW, Gandolfo MA, Jordan GJ, Wilf P, Cantrill DJ, Bayly MJ, Bromham L, Brown GK, Carpenter RJ, Lee DM, Murphy DJ, Sniderman JMK, Udovicic F. 2012. Testing the impact of calibration on molecular divergence times using a fossil-rich group: the case of Nothofagus (Fagales). Systematic Biology 61: 289-313.
-
(2012)
Systematic Biology
, vol.61
, pp. 289-313
-
-
Sauquet, H.1
Ho, S.Y.W.2
Gandolfo, M.A.3
Jordan, G.J.4
Wilf, P.5
Cantrill, D.J.6
Bayly, M.J.7
Bromham, L.8
Brown, G.K.9
Carpenter, R.J.10
Lee, D.M.11
Murphy, D.J.12
Sniderman, J.M.K.13
Udovicic, F.14
-
101
-
-
0032829403
-
Fossil flowers with Normapolles pollen from the Late Cretaceous of southeastern North America
-
Sims HJ, Herendeen PS, Lupia R, Christopher RA, Crane PR. 1999. Fossil flowers with Normapolles pollen from the Late Cretaceous of southeastern North America. Review of Palaeobotany and Palynology 106: 131-151.
-
(1999)
Review of Palaeobotany and Palynology
, vol.106
, pp. 131-151
-
-
Sims, H.J.1
Herendeen, P.S.2
Lupia, R.3
Christopher, R.A.4
Crane, P.R.5
-
102
-
-
0036433299
-
Dating the time of origin of major clades: molecular clocks and the fossil record
-
Smith AB, Peterson KJ. 2002. Dating the time of origin of major clades: molecular clocks and the fossil record. Annual Review of Earth and Planetary Sciences 30: 65-88.
-
(2002)
Annual Review of Earth and Planetary Sciences
, vol.30
, pp. 65-88
-
-
Smith, A.B.1
Peterson, K.J.2
-
103
-
-
56849084053
-
Phylogeny and putative hybridization in the subtribe Paranepheliinae (Liabeae, Asteraceae), implications for classification, biogeography, and Andean orogeny
-
Soejima A, Wen J, Zapata M, Dillon MO. 2008. Phylogeny and putative hybridization in the subtribe Paranepheliinae (Liabeae, Asteraceae), implications for classification, biogeography, and Andean orogeny. Journal of Systematics and Evolution 46: 375-390.
-
(2008)
Journal of Systematics and Evolution
, vol.46
, pp. 375-390
-
-
Soejima, A.1
Wen, J.2
Zapata, M.3
Dillon, M.O.4
-
104
-
-
84863337944
-
Angiosperm phylogeny: 17 genes, 640 taxa
-
Soltis DE, Smith SA, Cellinese N, Wurdack KJ, Tank DC, Brockington SF, Refulio-Rodriguez NF, Walker JB, Moore MJ, Carlsward BS, Bell CD, Latvis M, Crawley S, Black C, Diouf D, Xi Z, Rushworth CA, Gitzendanner MA, Sytsma KJ, Qiu YL, Hilu KW, Davis CC, Sanderson MJ, Beaman RS, Olmstead RG, Judd WS, Donoghue MJ, Soltis PS. 2011. Angiosperm phylogeny: 17 genes, 640 taxa. American Journal of Botany 98: 704-730.
-
(2011)
American Journal of Botany
, vol.98
, pp. 704-730
-
-
Soltis, D.E.1
Smith, S.A.2
Cellinese, N.3
Wurdack, K.J.4
Tank, D.C.5
Brockington, S.F.6
Refulio-Rodriguez, N.F.7
Walker, J.B.8
Moore, M.J.9
Carlsward, B.S.10
Bell, C.D.11
Latvis, M.12
Crawley, S.13
Black, C.14
Diouf, D.15
Xi, Z.16
Rushworth, C.A.17
Gitzendanner, M.A.18
Sytsma, K.J.19
Qiu, Y.L.20
Hilu, K.W.21
Davis, C.C.22
Sanderson, M.J.23
Beaman, R.S.24
Olmstead, R.G.25
Judd, W.S.26
Donoghue, M.J.27
Soltis, P.S.28
more..
-
106
-
-
4944240254
-
Clades, clocks, and continents: historical and biogeographical analysis of Myrtaceae, Vochysiaceae, and relatives in the Southern Hemisphere
-
Sytsma KJ, Litt A, Zjhra M, Pires JC, Nepokroeff M, Conti E, Walker J, Wilson P. 2004. Clades, clocks, and continents: historical and biogeographical analysis of Myrtaceae, Vochysiaceae, and relatives in the Southern Hemisphere. International Journal of Plant Sciences 165: 85-105.
-
(2004)
International Journal of Plant Sciences
, vol.165
, pp. 85-105
-
-
Sytsma, K.J.1
Litt, A.2
Zjhra, M.3
Pires, J.C.4
Nepokroeff, M.5
Conti, E.6
Walker, J.7
Wilson, P.8
-
107
-
-
33847371187
-
Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding
-
Taberlet P, Coissac E, Pompanon F, Gielly L, Miquel C, Valentini A, Vermat T, Corthier G, Brochmann C, Willerslev E. 2007. Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Research 35: e14.
-
(2007)
Nucleic Acids Research
, vol.35
-
-
Taberlet, P.1
Coissac, E.2
Pompanon, F.3
Gielly, L.4
Miquel, C.5
Valentini, A.6
Vermat, T.7
Corthier, G.8
Brochmann, C.9
Willerslev, E.10
-
108
-
-
0026261665
-
Universal primers for amplification of three noncoding regions of chloroplast DNA
-
Taberlet P, Gielly L, Patou G, Bouvet J. 1991. Universal primers for amplification of three noncoding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
-
(1991)
Plant Molecular Biology
, vol.17
, pp. 1105-1109
-
-
Taberlet, P.1
Gielly, L.2
Patou, G.3
Bouvet, J.4
-
109
-
-
0032747976
-
Esgueiria futabensis sp. nov., a new angiosperm flower from the Upper Cretaceous (Lower Coniacian) of northeastern Honshu, Japan
-
Takahashi M, Crane PR, Ando H. 1999. Esgueiria futabensis sp. nov., a new angiosperm flower from the Upper Cretaceous (Lower Coniacian) of northeastern Honshu, Japan. Paleontological Research 3: 81-87.
-
(1999)
Paleontological Research
, vol.3
, pp. 81-87
-
-
Takahashi, M.1
Crane, P.R.2
Ando, H.3
-
110
-
-
84857233832
-
Are pollen fossils useful for calibrating relaxed molecular clock dating of phylogenies? A comparative study using Myrtaceae
-
Thornhill AH, Popple LW, Carter RJ, Ho SYW, Crisp MD. 2012. Are pollen fossils useful for calibrating relaxed molecular clock dating of phylogenies? A comparative study using Myrtaceae. Molecular Phylogenetics and Evolution 63: 15-27.
-
(2012)
Molecular Phylogenetics and Evolution
, vol.63
, pp. 15-27
-
-
Thornhill, A.H.1
Popple, L.W.2
Carter, R.J.3
Ho, S.Y.W.4
Crisp, M.D.5
-
111
-
-
84870983985
-
Past climate change and plant evolution in Western North America: a case study in Rosaceae
-
Töpel M, Antonelli A, Yesson C, Eriksen B. 2012. Past climate change and plant evolution in Western North America: a case study in Rosaceae. PLoS ONE 7: e50358.
-
(2012)
PLoS ONE
, vol.7
-
-
Töpel, M.1
Antonelli, A.2
Yesson, C.3
Eriksen, B.4
-
112
-
-
84875114550
-
-
The Geological Society of America Geologic Time Scale: GSA Bulletin. doi:10.1130/B30712.1.
-
Walker JD, Geissman JW, Bowring SA, Babcock LE. 2013. The Geological Society of America Geologic Time Scale: GSA Bulletin. doi:10.1130/B30712.1.
-
(2013)
-
-
Walker, J.D.1
Geissman, J.W.2
Bowring, S.A.3
Babcock, L.E.4
-
113
-
-
62649125150
-
Rosid radiation and the rapid rise of angiosperm-dominated forests
-
Wang H, Moore MJ, Soltis PS, Bell CD, Brockington SF, Alexandre R, Davis CC, Latvis M, Manchester SR, Soltis DE. 2009. Rosid radiation and the rapid rise of angiosperm-dominated forests. Proceedings of the National Academy of Sciences of the United States of America 106: 3853-3858.
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, pp. 3853-3858
-
-
Wang, H.1
Moore, M.J.2
Soltis, P.S.3
Bell, C.D.4
Brockington, S.F.5
Alexandre, R.6
Davis, C.C.7
Latvis, M.8
Manchester, S.R.9
Soltis, D.E.10
-
114
-
-
84863012163
-
Exploring uncertainty in the calibration of the molecular clock
-
Warnock RCM, Yang Z, Donoghue PCJ. 2012. Exploring uncertainty in the calibration of the molecular clock. Biology Letters 8: 156-159.
-
(2012)
Biology Letters
, vol.8
, pp. 156-159
-
-
Warnock, R.C.M.1
Yang, Z.2
Donoghue, P.C.J.3
-
117
-
-
79952158855
-
Dating primate divergences through an integrated analysis of paleontological and molecular data
-
Wilkinson RD, Steiper ME, Soligo C, Martin RD, Yang Z, Tavaré S. 2011. Dating primate divergences through an integrated analysis of paleontological and molecular data. Systematic Biology 60: 16-31.
-
(2011)
Systematic Biology
, vol.60
, pp. 16-31
-
-
Wilkinson, R.D.1
Steiper, M.E.2
Soligo, C.3
Martin, R.D.4
Yang, Z.5
Tavaré, S.6
-
118
-
-
33947370511
-
Phylogeny of basal eudicots: insights from non-coding and rapidly evolving DNA
-
Worberg A, Quandt D, Barniske A-M, Löhne C, Hilu KW, Borsch T. 2007. Phylogeny of basal eudicots: insights from non-coding and rapidly evolving DNA. Organisms Diversity & Evolution 7: 55-77.
-
(2007)
Organisms Diversity & Evolution
, vol.7
, pp. 55-77
-
-
Worberg, A.1
Quandt, D.2
Barniske, A.-M.3
Löhne, C.4
Hilu, K.W.5
Borsch, T.6
-
119
-
-
0032028624
-
On the best evolutionary rate for phylogenetic analysis
-
Yang Z. 1998. On the best evolutionary rate for phylogenetic analysis. Systematic Biology 47: 125-133.
-
(1998)
Systematic Biology
, vol.47
, pp. 125-133
-
-
Yang, Z.1
-
120
-
-
28944451210
-
Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds
-
Yang Z, Rannala B. 2006. Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. Systematic Biology 23: 212-226.
-
(2006)
Systematic Biology
, vol.23
, pp. 212-226
-
-
Yang, Z.1
Rannala, B.2
-
121
-
-
84862814389
-
Molecular phylogenetics: principles and practice
-
Yang Z, Rannala B. 2012. Molecular phylogenetics: principles and practice. Nature Reviews Genetics 13: 303-314.
-
(2012)
Nature Reviews Genetics
, vol.13
, pp. 303-314
-
-
Yang, Z.1
Rannala, B.2
-
122
-
-
80052175543
-
Exploring patterns and extent of bias in estimating divergence time from mitochondrial DNA sequence data in a particular lineage: a case study of salamanders (Order Caudata)
-
Zheng Y, Peng R, Kuro-o M, Zeng X. 2011. Exploring patterns and extent of bias in estimating divergence time from mitochondrial DNA sequence data in a particular lineage: a case study of salamanders (Order Caudata). Molecular Biology and Evolution 28: 2521-2535.
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 2521-2535
-
-
Zheng, Y.1
Peng, R.2
Kuro-o, M.3
Zeng, X.4
-
123
-
-
38849141932
-
Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids
-
Zhu XY, Chase MW, Qiu YL, Kong HZ, Dilcher DL, Li JH, Chen ZD. 2007. Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids. BMC Evolutionary Biology 71: 217.
-
(2007)
BMC Evolutionary Biology
, vol.71
, pp. 217
-
-
Zhu, X.Y.1
Chase, M.W.2
Qiu, Y.L.3
Kong, H.Z.4
Dilcher, D.L.5
Li, J.H.6
Chen, Z.D.7
-
124
-
-
84906302924
-
-
Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Unpublished D. Phil. Thesis, University of Texas, Austin.
-
Zwickl D. 2006. Genetic algorithm approaches for the phylogenetic analysis of large biological sequence datasets under the maximum likelihood criterion. Unpublished D. Phil. Thesis, University of Texas, Austin.
-
(2006)
-
-
Zwickl, D.1
|