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Volumn 8, Issue 1, 2012, Pages 156-159

Exploring uncertainty in the calibration of the molecular clock

Author keywords

BEAST; Calibration; Evolution; Fossil record; MCMCTREE; Molecular clock

Indexed keywords

ARTHROPOD; BAYESIAN ANALYSIS; CALIBRATION; DATING METHOD; DIVERGENCE; FOSSIL RECORD; MOLECULAR ANALYSIS; PARAMETERIZATION; PHYLOGENY; TIMESCALE; UNCERTAINTY ANALYSIS;

EID: 84863012163     PISSN: 17449561     EISSN: 1744957X     Source Type: Journal    
DOI: 10.1098/rsbl.2011.0710     Document Type: Article
Times cited : (169)

References (13)
  • 1
    • 33344465800 scopus 로고    scopus 로고
    • Relaxed phylogenetics and dating with confidence
    • doi:10.1371/journal.pbio.0040088
    • Drummond, A. J., Ho, S. Y. W., Phillips, M. J. & Rambaut, A. 2006 Relaxed phylogenetics and dating with confidence. PLoS Biol. 4, e88. (doi:10.1371/journal.pbio.0040088)
    • (2006) PLoS Biol. , vol.4
    • Drummond, A.J.1    Ho, S.Y.W.2    Phillips, M.J.3    Rambaut, A.4
  • 2
    • 28944451210 scopus 로고    scopus 로고
    • Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds
    • doi:10.1093/molbev/msj024
    • Yang, Z. & Rannala, B. 2006 Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. Mol. Biol. Evol. 23, 212-226. (doi:10.1093/molbev/msj024)
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 212-226
    • Yang, Z.1    Rannala, B.2
  • 3
    • 33845883023 scopus 로고    scopus 로고
    • Paleontological evidence to date the Tree of Life
    • doi:10.1093/molbev/msl150
    • Benton, M. J. & Donoghue, P. C. J. 2007 Paleontological evidence to date the Tree of Life. Mol. Biol. Evol. 24, 26-53. (doi:10.1093/molbev/msl150)
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 26-53
    • Benton, M.J.1    Donoghue, P.C.J.2
  • 4
    • 34447333669 scopus 로고    scopus 로고
    • Rocks and clocks: Calibrating the Tree of Life using fossils and molecules
    • doi:10.1016/j.tree.2007.05.005
    • Donoghue, P. C. J. & Benton, M. J. 2007 Rocks and clocks: calibrating the Tree of Life using fossils and molecules. Trends Ecol. Evol. 22, 424-431. (doi:10.1016/j.tree.2007.05.005)
    • (2007) Trends Ecol. Evol. , vol.22 , pp. 424-431
    • Donoghue, P.C.J.1    Benton, M.J.2
  • 5
    • 70350116756 scopus 로고    scopus 로고
    • Calibrating and constraining molecular clocks
    • (eds S. B. Hedges & S. Kumar). Oxford, UK: Oxford University Press
    • Benton, M. J., Donoghue, P. C. J. & Asher, R. J. 2009 Calibrating and constraining molecular clocks. In The timetree of life (eds S. B. Hedges & S. Kumar), pp. 35-86. Oxford, UK: Oxford University Press.
    • (2009) The Timetree of Life , pp. 35-86
    • Benton, M.J.1    Donoghue, P.C.J.2    Asher, R.J.3
  • 6
    • 34347329101 scopus 로고    scopus 로고
    • Calibrating molecular estimates of substitution rates and divergence times in birds
    • doi:10.1111/j.2007.0908-8857.04168.x
    • Ho, S. Y.W. 2007 Calibrating molecular estimates of substitution rates and divergence times in birds. J. Avian Biol. 38, 409-414. (doi:10.1111/j.2007. 0908-8857.04168.x)
    • (2007) J. Avian Biol. , vol.38 , pp. 409-414
    • Ho, S.Y.W.1
  • 7
    • 70350103638 scopus 로고    scopus 로고
    • Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times
    • doi:10.1093/sysbio/syp035
    • Ho, S. Y. W. & Phillips, M. J. 2009 Accounting for calibration uncertainty in phylogenetic estimation of evolutionary divergence times. System. Biol. 58, 367-380. (doi:10.1093/sysbio/syp035)
    • (2009) System. Biol. , vol.58 , pp. 367-380
    • Ho, S.Y.W.1    Phillips, M.J.2
  • 8
    • 72049121650 scopus 로고    scopus 로고
    • The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times
    • doi:10.1093/sysbio/syp078
    • Inoue, J. G., Donoghue, P. C. J. & Yang, Z. 2010 The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times. System. Biol. 59, 74-89. (doi:10.1093/sysbio/syp078)
    • (2010) System. Biol. , vol.59 , pp. 74-89
    • Inoue, J.G.1    Donoghue, P.C.J.2    Yang, Z.3
  • 9
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: A program package for phylogenetic analysis by maximum likelihood
    • doi:10.1093/molbev/msm088
    • Yang, Z. 2007 PAML 4: a program package for phylogenetic analysis by maximum likelihood. Mol. Biol. Evol. 24, 1586-1591. (doi:10.1093/molbev/msm088)
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 10
    • 84873075876 scopus 로고    scopus 로고
    • Calibrated tree priors for relaxed phylogenetics and divergence time estimation
    • In press
    • Heled, J. & Drummond, A. J. In press. Calibrated tree priors for relaxed phylogenetics and divergence time estimation. System. Biol.
    • System. Biol
    • Heled, J.1    Drummond, A.J.2
  • 11
    • 1942422549 scopus 로고    scopus 로고
    • Precision of molecular time estimates
    • doi:10.1016/j.tig.2004.03.004
    • Hedges, S. B. & Kumar, S. 2004 Precision of molecular time estimates. Trends Genet. 20, 242-247. (doi:10.1016/j.tig.2004.03.004)
    • (2004) Trends Genet. , vol.20 , pp. 242-247
    • Hedges, S.B.1    Kumar, S.2
  • 12
    • 79952158855 scopus 로고    scopus 로고
    • Dating primate divergences through an integrated analysis of palaeontological and molecular data
    • doi:10.1093/sysbio/syq054
    • Wilkinson, R. D., Steiper, M. E., Soligo, C., Martin, R. D., Yang, Z. & Tavaré, S. 2011 Dating primate divergences through an integrated analysis of palaeontological and molecular data. System. Biol. 60, 16-31. (doi:10.1093/sysbio/syq054)
    • (2011) System. Biol. , vol.60 , pp. 16-31
    • Wilkinson, R.D.1    Steiper, M.E.2    Soligo, C.3    Martin, R.D.4    Yang, Z.5    Tavaré, S.6
  • 13
    • 34548556039 scopus 로고    scopus 로고
    • Inferring speciation times under an episodic molecular clock
    • doi:10.1080/10635150701420643
    • Rannala, B. & Yang, Z. H. 2007 Inferring speciation times under an episodic molecular clock. System. Biol. 56, 453-466. (doi:10.1080/ 10635150701420643)
    • (2007) System. Biol. , vol.56 , pp. 453-466
    • Rannala, B.1    Yang, Z.H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.