-
1
-
-
0036469287
-
Identification of a ubiquitin-protein ligase subunit within the CCR4-NOT transcription repressor complex
-
doi: 10.1093/emboj/21.3.355
-
Albert, T.K., Hanzawa, H., Legtenberg, Y.I., De Ruwe, M.J., Van Den Heuvel, F.A., Collart, M.A., et al. (2002). Identification of a ubiquitin-protein ligase subunit within the CCR4-NOT transcription repressor complex. EMBO J. 21, 355-364. doi: 10.1093/emboj/21.3.355
-
(2002)
EMBO J
, vol.21
, pp. 355-364
-
-
Albert, T.K.1
Hanzawa, H.2
Legtenberg, Y.I.3
De Ruwe, M.J.4
Van Den Heuvel, F.A.5
Collart, M.A.6
-
2
-
-
0034141888
-
Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits
-
doi: 10.1093/nar/28.3.809
-
Albert, T.K., Lemaire, M., Van Berkum, N.L., Gentz, R., Collart, M.A., and Timmers, H.T. (2000). Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits. Nucleic Acids Res. 28, 809-817. doi: 10.1093/nar/28.3.809
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 809-817
-
-
Albert, T.K.1
Lemaire, M.2
Van Berkum, N.L.3
Gentz, R.4
Collart, M.A.5
Timmers, H.T.6
-
3
-
-
65249093782
-
The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site
-
doi: 10.1261/rna.1489409
-
Andersen, K.R., Jonstrup, A.T., Van, L.B., and Brodersen, D.E. (2009). The activity and selectivity of fission yeast Pop2p are affected by a high affinity for Zn2+ and Mn2+ in the active site. RNA 15, 850-861. doi: 10.1261/rna.1489409
-
(2009)
RNA
, vol.15
, pp. 850-861
-
-
Andersen, K.R.1
Jonstrup, A.T.2
Van, L.B.3
Brodersen, D.E.4
-
4
-
-
70349337771
-
The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation
-
doi: 10.1091/mbc.E09-02-0146
-
Aslam, A., Mittal, S., Koch, F., Andrau, J.C., and Winkler, G.S. (2009). The Ccr4-NOT deadenylase subunits CNOT7 and CNOT8 have overlapping roles and modulate cell proliferation. Mol. Biol. Cell 20, 3840-3850. doi: 10.1091/mbc.E09-02-0146
-
(2009)
Mol. Biol. Cell
, vol.20
, pp. 3840-3850
-
-
Aslam, A.1
Mittal, S.2
Koch, F.3
Andrau, J.C.4
Winkler, G.S.5
-
5
-
-
0033911879
-
Functional interaction of CCR4-NOT proteins with TATAA-binding protein (TBP) and its associated factors in yeast
-
Badarinarayana, V., Chiang, Y.C., and Denis, C.L. (2000). Functional interaction of CCR4-NOT proteins with TATAA-binding protein (TBP) and its associated factors in yeast. Genetics 155, 1045-1054.
-
(2000)
Genetics
, vol.155
, pp. 1045-1054
-
-
Badarinarayana, V.1
Chiang, Y.C.2
Denis, C.L.3
-
6
-
-
0032874875
-
The CCR4 and CAF1 proteins of the CCR4-NOT complex are physically and functionally separated from NOT2, NOT4, and NOT5
-
Bai, Y., Salvadore, C., Chiang, Y.C., Collart, M.A., Liu, H.Y., and Denis, C.L. (1999). The CCR4 and CAF1 proteins of the CCR4-NOT complex are physically and functionally separated from NOT2, NOT4, and NOT5. Mol. Cell. Biol. 19, 6642-6651.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 6642-6651
-
-
Bai, Y.1
Salvadore, C.2
Chiang, Y.C.3
Collart, M.A.4
Liu, H.Y.5
Denis, C.L.6
-
7
-
-
77955414308
-
The structural basis for deadenylation by the CCR4-NOT complex
-
doi: 10.1007/s13238-010-0060-8
-
Bartlam, M., and Yamamoto, T. (2010). The structural basis for deadenylation by the CCR4-NOT complex. Protein Cell 1, 443-452. doi: 10.1007/s13238-010-0060-8
-
(2010)
Protein Cell
, vol.1
, pp. 443-452
-
-
Bartlam, M.1
Yamamoto, T.2
-
8
-
-
84868094761
-
Architecture of the nuclease module of the yeast Ccr4-not complex: the Not1-Caf1-Ccr4 interaction
-
doi: 10.1016/j.molcel.2012.08.014
-
Basquin, J., Roudko, V.V., Rode, M., Basquin, C., Seraphin, B., and Conti, E. (2012). Architecture of the nuclease module of the yeast Ccr4-not complex: the Not1-Caf1-Ccr4 interaction. Mol. Cell 48, 207-218. doi: 10.1016/j.molcel.2012.08.014
-
(2012)
Mol. Cell
, vol.48
, pp. 207-218
-
-
Basquin, J.1
Roudko, V.V.2
Rode, M.3
Basquin, C.4
Seraphin, B.5
Conti, E.6
-
9
-
-
84874586399
-
NOT10 and C2orf29/NOT11 form a conserved module of the CCR4-NOT complex that docks onto the NOT1 N-terminal domain
-
doi: 10.4161/rna.23018
-
Bawankar, P., Loh, B., Wohlbold, L., Schmidt, S., and Izaurralde, E. (2013). NOT10 and C2orf29/NOT11 form a conserved module of the CCR4-NOT complex that docks onto the NOT1 N-terminal domain. RNA Biol. 10, 228-244. doi: 10.4161/rna.23018
-
(2013)
RNA Biol
, vol.10
, pp. 228-244
-
-
Bawankar, P.1
Loh, B.2
Wohlbold, L.3
Schmidt, S.4
Izaurralde, E.5
-
10
-
-
0032538977
-
Association of distinct yeast Not2 functional domains with components of Gcn5 histone acetylase and CCR4 transcriptional regulatory complexes
-
doi: 10.1093/emboj/17.22.6714
-
Benson, J.D., Benson, M., Howley, P.M., and Struhl, K. (1998). Association of distinct yeast Not2 functional domains with components of Gcn5 histone acetylase and CCR4 transcriptional regulatory complexes. EMBO J. 17, 6714-6722. doi: 10.1093/emboj/17.22.6714
-
(1998)
EMBO J
, vol.17
, pp. 6714-6722
-
-
Benson, J.D.1
Benson, M.2
Howley, P.M.3
Struhl, K.4
-
11
-
-
84887453009
-
Structure and RNA-binding properties of the Not1-Not2-Not5 module of the yeast Ccr4-Not complex
-
doi: 10.1038/nsmb.2686
-
Bhaskar, V., Roudko, V., Basquin, J., Sharma, K., Urlaub, H., Seraphin, B., et al. (2013). Structure and RNA-binding properties of the Not1-Not2-Not5 module of the yeast Ccr4-Not complex. Nat. Struct. Mol. Biol. 20, 1281-1288. doi: 10.1038/nsmb.2686
-
(2013)
Nat. Struct. Mol. Biol
, vol.20
, pp. 1281-1288
-
-
Bhaskar, V.1
Roudko, V.2
Basquin, J.3
Sharma, K.4
Urlaub, H.5
Seraphin, B.6
-
12
-
-
0032374047
-
Human carbon catabolite repressor protein (CCR4)-associative factor 1: cloning, expression and characterization of its interaction with the B-cell translocation protein BTG1
-
Bogdan, J.A., Adams-Burton, C., Pedicord, D.L., Sukovich, D.A., Benfield, P.A., Corjay, M.H., et al. (1998). Human carbon catabolite repressor protein (CCR4)-associative factor 1: cloning, expression and characterization of its interaction with the B-cell translocation protein BTG1. Biochem.J. 336(Pt 2), 471-481.
-
(1998)
Biochem.J.
, vol.336
, Issue.PART 2
, pp. 471-481
-
-
Bogdan, J.A.1
Adams-Burton, C.2
Pedicord, D.L.3
Sukovich, D.A.4
Benfield, P.A.5
Corjay, M.H.6
-
13
-
-
84887455870
-
Structure and assembly of the NOT module of the human CCR4-NOT complex
-
doi: 10.1038/nsmb.2681
-
Boland, A., Chen, Y., Raisch, T., Jonas, S., Kuzuoglu-Ozturk, D., Wohlbold, L., et al. (2013). Structure and assembly of the NOT module of the human CCR4-NOT complex. Nat. Struct. Mol. Biol. 20, 1289-1297. doi: 10.1038/nsmb.2681
-
(2013)
Nat. Struct. Mol. Biol
, vol.20
, pp. 1289-1297
-
-
Boland, A.1
Chen, Y.2
Raisch, T.3
Jonas, S.4
Kuzuoglu-Ozturk, D.5
Wohlbold, L.6
-
14
-
-
0037086701
-
CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase
-
doi: 10.1093/emboj/21.6.1414
-
Chen, J., Chiang, Y.C., and Denis, C.L. (2002). CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase. EMBO J. 21, 1414-1426. doi: 10.1093/emboj/21.6.1414
-
(2002)
EMBO J
, vol.21
, pp. 1414-1426
-
-
Chen, J.1
Chiang, Y.C.2
Denis, C.L.3
-
15
-
-
0242285769
-
Global control of gene expression in yeast by the Ccr4-Not complex
-
doi: 10.1016/S0378-1119(03)00672-3
-
Collart, M.A. (2003). Global control of gene expression in yeast by the Ccr4-Not complex. Gene 313, 1-16. doi: 10.1016/S0378-1119(03)00672-3
-
(2003)
Gene
, vol.313
, pp. 1-16
-
-
Collart, M.A.1
-
16
-
-
84155195139
-
The Ccr4 - not complex
-
doi: 10.1016/j.gene.2011.09.033
-
Collart, M.A., and Panasenko, O.O. (2012). The Ccr4 - not complex. Gene 492, 42-53. doi: 10.1016/j.gene.2011.09.033
-
(2012)
Gene
, vol.492
, pp. 42-53
-
-
Collart, M.A.1
Panasenko, O.O.2
-
17
-
-
84873247966
-
The Not3/5 subunit of the Ccr4-Not complex: a central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells
-
doi: 10.1016/j.cellsig.2012.12.018
-
Collart, M.A., Panasenko, O.O., and Nikolaev, S.I. (2013). The Not3/5 subunit of the Ccr4-Not complex: a central regulator of gene expression that integrates signals between the cytoplasm and the nucleus in eukaryotic cells. Cell. Signal. 25, 743-751. doi: 10.1016/j.cellsig.2012.12.018
-
(2013)
Cell. Signal
, vol.25
, pp. 743-751
-
-
Collart, M.A.1
Panasenko, O.O.2
Nikolaev, S.I.3
-
18
-
-
0027394010
-
CDC39, an essential nuclear protein that negatively regulates transcription and differentially affects the constitutive and inducible HIS3 promoters
-
Collart, M.A., and Struhl, K. (1993). CDC39, an essential nuclear protein that negatively regulates transcription and differentially affects the constitutive and inducible HIS3 promoters. EMBO J. 12, 177-186.
-
(1993)
EMBO J.
, vol.12
, pp. 177-186
-
-
Collart, M.A.1
Struhl, K.2
-
19
-
-
0028268566
-
NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization
-
doi: 10.1101/gad.8.5.525
-
Collart, M.A., and Struhl, K. (1994). NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization. Genes Dev. 8, 525-537. doi: 10.1101/gad.8.5.525
-
(1994)
Genes Dev
, vol.8
, pp. 525-537
-
-
Collart, M.A.1
Struhl, K.2
-
20
-
-
0036785497
-
The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions
-
doi: 10.1128/MCB.22.19.6735-6749.2002
-
Deluen, C., James, N., Maillet, L., Molinete, M., Theiler, G., Lemaire, M., et al. (2002). The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions. Mol. Cell. Biol. 22, 6735-6749. doi: 10.1128/MCB.22.19.6735-6749.2002
-
(2002)
Mol. Cell. Biol
, vol.22
, pp. 6735-6749
-
-
Deluen, C.1
James, N.2
Maillet, L.3
Molinete, M.4
Theiler, G.5
Lemaire, M.6
-
21
-
-
1842607157
-
Structural model of the UbcH5B/CNOT4 complex revealed by combining NMR, mutagenesis, and docking approaches
-
doi: 10.1016/j.str.2004.03.004
-
Dominguez, C., Bonvin, A.M., Winkler, G.S., Van Schaik, F.M., Timmers, H.T., and Boelens, R. (2004). Structural model of the UbcH5B/CNOT4 complex revealed by combining NMR, mutagenesis, and docking approaches. Structure 12, 633-644. doi: 10.1016/j.str.2004.03.004
-
(2004)
Structure
, vol.12
, pp. 633-644
-
-
Dominguez, C.1
Bonvin, A.M.2
Winkler, G.S.3
Van Schaik, F.M.4
Timmers, H.T.5
Boelens, R.6
-
22
-
-
0028304670
-
CCR4 is a glucose-regulated transcription factor whose leucine-rich repeat binds several proteins important for placing CCR4 in its proper promoter context
-
Draper, M.P., Liu, H.Y., Nelsbach, A.H., Mosley, S.P., and Denis, C.L. (1994). CCR4 is a glucose-regulated transcription factor whose leucine-rich repeat binds several proteins important for placing CCR4 in its proper promoter context. Mol. Cell. Biol. 14, 4522-4531.
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 4522-4531
-
-
Draper, M.P.1
Liu, H.Y.2
Nelsbach, A.H.3
Mosley, S.P.4
Denis, C.L.5
-
23
-
-
0029025449
-
Identification of a mouse protein whose homolog in Saccharomyces cerevisiae is a component of the Ccr4 transcriptional regulatory complex
-
Draper, M.P., Salvadore, C., and Denis, C.L. (1995). Identification of a mouse protein whose homolog in Saccharomyces cerevisiae is a component of the Ccr4 transcriptional regulatory complex. Mol. Cell. Biol. 15, 3487-3495.
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 3487-3495
-
-
Draper, M.P.1
Salvadore, C.2
Denis, C.L.3
-
24
-
-
9144252209
-
Identification of four families of yCCR4- Mg2+-dependent endonuclease-related proteins in higher eukaryotes, characterization of orthologs of yCCR4 with a conserved leucine-rich repeat essential for hCAF1/hPOP2 binding
-
doi: 10.1186/1471-2164-2-9.
-
Dupressoir, A., Morel, A.P., Barbot, W., Loireau, M.P., Corbo, L., and Heidmann, T. (2001). Identification of four families of yCCR4- and Mg2+-dependent endonuclease-related proteins in higher eukaryotes, and characterization of orthologs of yCCR4 with a conserved leucine-rich repeat essential for hCAF1/hPOP2 binding. BMC Genomics 2:9. doi: 10.1186/1471-2164-2-9
-
(2001)
BMC Genomics
, vol.2
, pp. 9
-
-
Dupressoir, A.1
Morel, A.P.2
Barbot, W.3
Loireau, M.P.4
Corbo, L.5
Heidmann, T.6
-
25
-
-
36049016095
-
Human TOB, an antiproliferative transcription factor, is a poly(A)-binding protein-dependent positive regulator of cytoplasmic mRNA deadenylation
-
doi: 10.1128/MCB.01254-07
-
Ezzeddine, N., Chang, T.C., Zhu, W., Yamashita, A., Chen, C.Y., Zhong, Z., et al. (2007). Human TOB, an antiproliferative transcription factor, is a poly(A)-binding protein-dependent positive regulator of cytoplasmic mRNA deadenylation. Mol. Cell. Biol. 27, 7791-7801. doi: 10.1128/MCB.01254-07
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 7791-7801
-
-
Ezzeddine, N.1
Chang, T.C.2
Zhu, W.3
Yamashita, A.4
Chen, C.Y.5
Zhong, Z.6
-
26
-
-
80555150587
-
miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT
-
doi: 10.1038/nsmb.2149
-
Fabian, M.R., Cieplak, M.K., Frank, F., Morita, M., Green, J., Srikumar, T., et al. (2011). miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT. Nat. Struct. Mol. Biol. 18, 1211-1217. doi: 10.1038/nsmb.2149
-
(2011)
Nat. Struct. Mol. Biol
, vol.18
, pp. 1211-1217
-
-
Fabian, M.R.1
Cieplak, M.K.2
Frank, F.3
Morita, M.4
Green, J.5
Srikumar, T.6
-
27
-
-
84878904767
-
Structural basis for the recruitment of the human CCR4-NOT deadenylase complex by tristetraprolin
-
doi: 10.1038/nsmb.2572
-
Fabian, M.R., Frank, F., Rouya, C., Siddiqui, N., Lai, W.S., Karetnikov, A., et al. (2013). Structural basis for the recruitment of the human CCR4-NOT deadenylase complex by tristetraprolin. Nat. Struct. Mol. Biol. 20, 735-739. doi: 10.1038/nsmb.2572
-
(2013)
Nat. Struct. Mol. Biol
, vol.20
, pp. 735-739
-
-
Fabian, M.R.1
Frank, F.2
Rouya, C.3
Siddiqui, N.4
Lai, W.S.5
Karetnikov, A.6
-
28
-
-
36849079370
-
Mechanism of mRNA deadenylation: evidence for a molecular interplay between translation termination factor eRF3 and mRNA deadenylases
-
doi: 10.1101/gad.1597707
-
Funakoshi, Y., Doi, Y., Hosoda, N., Uchida, N., Osawa, M., Shimada, I., et al. (2007). Mechanism of mRNA deadenylation: evidence for a molecular interplay between translation termination factor eRF3 and mRNA deadenylases. Genes Dev. 21, 3135-3148. doi: 10.1101/gad.1597707
-
(2007)
Genes Dev
, vol.21
, pp. 3135-3148
-
-
Funakoshi, Y.1
Doi, Y.2
Hosoda, N.3
Uchida, N.4
Osawa, M.5
Shimada, I.6
-
29
-
-
33846539150
-
Atomic model of human Rcd-1 reveals an armadillo-like-repeat protein with in vitro nucleic acid binding properties
-
doi: 10.1110/ps.062600507
-
Garces, R.G., Gillon, W., and Pai, E.F. (2007). Atomic model of human Rcd-1 reveals an armadillo-like-repeat protein with in vitro nucleic acid binding properties. Protein Sci. 16, 176-188. doi: 10.1110/ps.062600507
-
(2007)
Protein Sci
, vol.16
, pp. 176-188
-
-
Garces, R.G.1
Gillon, W.2
Pai, E.F.3
-
30
-
-
0037050026
-
Functional organization of the yeast proteome by systematic analysis of protein complexes
-
doi: 10.1038/415141a
-
Gavin, A.C., Bosche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., et al. (2002). Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415, 141-147. doi: 10.1038/415141a
-
(2002)
Nature
, vol.415
, pp. 141-147
-
-
Gavin, A.C.1
Bosche, M.2
Krause, R.3
Grandi, P.4
Marzioch, M.5
Bauer, A.6
-
31
-
-
84898429935
-
The Not4 E3 Ligase CCR4 Deadenylase play distinct roles in protein quality control
-
doi: 10.1371/journal.pone.0086218.
-
Halter, D., Collart, M.A., and Panasenko, O.O. (2014). The Not4 E3 Ligase and CCR4 Deadenylase play distinct roles in protein quality control. PLoS ONE 9:e86218. doi: 10.1371/journal.pone.0086218
-
(2014)
PLoS ONE
, vol.9
-
-
Halter, D.1
Collart, M.A.2
Panasenko, O.O.3
-
32
-
-
0035971097
-
The structure of the C4C4 ring finger of human NOT4 reveals features distinct from those of C3HC4 RING fingers
-
doi: 10.1074/jbc.M009298200
-
Hanzawa, H., De Ruwe, M.J., Albert, T.K., Van Der Vliet, P.C., Timmers, H.T., and Boelens, R. (2001). The structure of the C4C4 ring finger of human NOT4 reveals features distinct from those of C3HC4 RING fingers.J. Biol. Chem. 276, 10185-10190. doi: 10.1074/jbc.M009298200
-
(2001)
J. Biol. Chem
, vol.276
, pp. 10185-10190
-
-
Hanzawa, H.1
De Ruwe, M.J.2
Albert, T.K.3
Van Der Vliet, P.C.4
Timmers, H.T.5
Boelens, R.6
-
33
-
-
67649713887
-
Structural basis for the antiproliferative activity of the Tob-hCaf1 complex
-
doi: 10.1074/jbc.M809250200
-
Horiuchi, M., Takeuchi, K., Noda, N., Muroya, N., Suzuki, T., Nakamura, T., et al. (2009). Structural basis for the antiproliferative activity of the Tob-hCaf1 complex.J. Biol. Chem. 284, 13244-13255. doi: 10.1074/jbc.M809250200
-
(2009)
J. Biol. Chem
, vol.284
, pp. 13244-13255
-
-
Horiuchi, M.1
Takeuchi, K.2
Noda, N.3
Muroya, N.4
Suzuki, T.5
Nakamura, T.6
-
34
-
-
79953016388
-
CNOT2 depletion disrupts inhibits the CCR4-NOT deadenylase complex induces apoptotic cell death.
-
doi: 10.1111/j.1365-2443.2011.01492.x.
-
Ito, K., Inoue, T., Yokoyama, K., Morita, M., Suzuki, T., and Yamamoto, T. (2011a). CNOT2 depletion disrupts and inhibits the CCR4-NOT deadenylase complex and induces apoptotic cell death. Genes Cells 16, 368-379. doi: 10.1111/j.1365-2443.2011.01492.x
-
(2011)
Genes Cells
, vol.16
, pp. 368-379
-
-
Ito, K.1
Inoue, T.2
Yokoyama, K.3
Morita, M.4
Suzuki, T.5
Yamamoto, T.6
-
35
-
-
80955125826
-
The role of the CNOT1 subunit of the CCR4-NOT complex in mRNA deadenylation cell viability
-
doi: 10.1007/s13238-011-1092-4.
-
Ito, K., Takahashi, A., Morita, M., Suzuki, T., and Yamamoto, T. (2011b). The role of the CNOT1 subunit of the CCR4-NOT complex in mRNA deadenylation and cell viability. Protein Cell 2, 755-763. doi: 10.1007/s13238-011-1092-4
-
(2011)
Protein Cell
, vol.2
, pp. 755-763
-
-
Ito, K.1
Takahashi, A.2
Morita, M.3
Suzuki, T.4
Yamamoto, T.5
-
36
-
-
34250670047
-
The 1.4-A crystal structure of the S
-
doi: 10.1093/nar/gkm178
-
Jonstrup, A.T., Andersen, K.R., Van, L.B., and Brodersen, D.E. (2007). The 1.4-A crystal structure of the S. pombe Pop2p deadenylase subunit unveils the configuration of an active enzyme. Nucleic Acids Res. 35, 3153-3164. doi: 10.1093/nar/gkm178
-
(2007)
pombe Pop2p deadenylase subunit unveils the configuration of an active enzyme. Nucleic Acids Res
, vol.35
, pp. 3153-3164
-
-
Jonstrup, A.T.1
Andersen, K.R.2
Van, L.B.3
Brodersen, D.E.4
-
37
-
-
70249110072
-
Human Ccr4-Not complexes contain variable deadenylase subunits
-
doi: 10.1042/BJ20090500
-
Lau, N.C., Kolkman, A., Van Schaik, F.M., Mulder, K.W., Pijnappel, W.W., Heck, A.J., et al. (2009). Human Ccr4-Not complexes contain variable deadenylase subunits. Biochem.J. 422, 443-453. doi: 10.1042/BJ20090500
-
(2009)
Biochem. J
, vol.422
, pp. 443-453
-
-
Lau, N.C.1
Kolkman, A.2
Van Schaik, F.M.3
Mulder, K.W.4
Pijnappel, W.W.5
Heck, A.J.6
-
38
-
-
0000584521
-
Interplay of positive and negative regulators in transcription initiation by RNA polymerase II holoenzyme
-
Lee, T.I., Wyrick, J.J., Koh, S.S., Jennings, E.G., Gadbois, E.L., and Young, R.A. (1998). Interplay of positive and negative regulators in transcription initiation by RNA polymerase II holoenzyme. Mol. Cell. Biol. 18, 4455-4462.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 4455-4462
-
-
Lee, T.I.1
Wyrick, J.J.2
Koh, S.S.3
Jennings, E.G.4
Gadbois, E.L.5
Young, R.A.6
-
39
-
-
0036231728
-
Saccharomyces cerevisiae Ccr4-not complex contributes to the control of Msn2p-dependent transcription by the Ras/cAMP pathway
-
doi: 10.1046/j.1365-2958.2002.02799.x
-
Lenssen, E., Oberholzer, U., Labarre, J., De Virgilio, C., and Collart, M.A. (2002). Saccharomyces cerevisiae Ccr4-not complex contributes to the control of Msn2p-dependent transcription by the Ras/cAMP pathway. Mol. Microbiol. 43, 1023-1037. doi: 10.1046/j.1365-2958.2002.02799.x
-
(2002)
Mol. Microbiol
, vol.43
, pp. 1023-1037
-
-
Lenssen, E.1
Oberholzer, U.2
Labarre, J.3
De Virgilio, C.4
Collart, M.A.5
-
40
-
-
0032481349
-
The NOT proteins are part of the CCR4 transcriptional complex and affect gene expression both positively and negatively
-
doi: 10.1093/emboj/17.4.1096
-
Liu, H.Y., Badarinarayana, V., Audino, D.C., Rappsilber, J., Mann, M., and Denis, C.L. (1998). The NOT proteins are part of the CCR4 transcriptional complex and affect gene expression both positively and negatively. EMBO J. 17, 1096-1106. doi: 10.1093/emboj/17.4.1096
-
(1998)
EMBO J
, vol.17
, pp. 1096-1106
-
-
Liu, H.Y.1
Badarinarayana, V.2
Audino, D.C.3
Rappsilber, J.4
Mann, M.5
Denis, C.L.6
-
41
-
-
0025193110
-
Tc, an unusual promoter element required for constitutive transcription of the yeast HIS3 gene
-
Mahadevan, S., and Struhl, K. (1990). Tc, an unusual promoter element required for constitutive transcription of the yeast HIS3 gene. Mol. Cell. Biol. 10, 4447-4455.
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 4447-4455
-
-
Mahadevan, S.1
Struhl, K.2
-
42
-
-
0037169544
-
Interaction between Not1p, a component of the Ccr4-not complex, a global regulator of transcription, and Dhh1p, a putative RNA helicase
-
doi: 10.1074/jbc.M107979200
-
Maillet, L., and Collart, M.A. (2002). Interaction between Not1p, a component of the Ccr4-not complex, a global regulator of transcription, and Dhh1p, a putative RNA helicase.J. Biol. Chem. 277, 2835-2842. doi: 10.1074/jbc.M107979200
-
(2002)
J. Biol. Chem
, vol.277
, pp. 2835-2842
-
-
Maillet, L.1
Collart, M.A.2
-
43
-
-
0034692875
-
The essential function of Not1 lies within the Ccr4-Not complex
-
doi: 10.1006/jmbi.2000.4131
-
Maillet, L., Tu, C., Hong, Y.K., Shuster, E.O., and Collart, M.A. (2000). The essential function of Not1 lies within the Ccr4-Not complex.J. Mol. Biol. 303, 131-143. doi: 10.1006/jmbi.2000.4131
-
(2000)
J. Mol. Biol
, vol.303
, pp. 131-143
-
-
Maillet, L.1
Tu, C.2
Hong, Y.K.3
Shuster, E.O.4
Collart, M.A.5
-
44
-
-
0026495335
-
The CCR4 protein from Saccharomyces cerevisiae contains a leucine-rich repeat region which is required for its control of ADH2 gene expression
-
Malvar, T., Biron, R.W., Kaback, D.B., and Denis, C.L. (1992). The CCR4 protein from Saccharomyces cerevisiae contains a leucine-rich repeat region which is required for its control of ADH2 gene expression. Genetics 132, 951-962.
-
(1992)
Genetics
, vol.132
, pp. 951-962
-
-
Malvar, T.1
Biron, R.W.2
Kaback, D.B.3
Denis, C.L.4
-
45
-
-
70449840077
-
BTG/TOB factors impact deadenylases
-
doi: 10.1016/j.tibs.2009.07.008
-
Mauxion, F., Chen, C.Y., Seraphin, B., and Shyu, A.B. (2009). BTG/TOB factors impact deadenylases. Trends Biochem. Sci. 34, 640-647. doi: 10.1016/j.tibs.2009.07.008
-
(2009)
Trends Biochem. Sci
, vol.34
, pp. 640-647
-
-
Mauxion, F.1
Chen, C.Y.2
Seraphin, B.3
Shyu, A.B.4
-
46
-
-
84874594044
-
C2ORF29/CNOT11 and CNOT10 form a new module of the CCR4-NOT complex
-
doi: 10.4161/rna.23065
-
Mauxion, F., Preve, B., and Seraphin, B. (2013). C2ORF29/CNOT11 and CNOT10 form a new module of the CCR4-NOT complex. RNA Biol. 10, 267-276. doi: 10.4161/rna.23065
-
(2013)
RNA Biol
, vol.10
, pp. 267-276
-
-
Mauxion, F.1
Preve, B.2
Seraphin, B.3
-
47
-
-
84862685172
-
Ccr4-Not complex: the control freak of eukaryotic cells
-
doi: 10.3109/10409238.2012.667214
-
Miller, J.E., and Reese, J.C. (2012). Ccr4-Not complex: the control freak of eukaryotic cells. Crit. Rev. Biochem. Mol. Biol 47, 315-333. doi: 10.3109/10409238.2012.667214
-
(2012)
Crit. Rev. Biochem. Mol. Biol
, vol.47
, pp. 315-333
-
-
Miller, J.E.1
Reese, J.C.2
-
48
-
-
79952822512
-
The Ccr4a (CNOT6) and Ccr4b (CNOT6L) deadenylase subunits of the human Ccr4-Not complex contribute to the prevention of cell death and senescence
-
doi: 10.1091/mbc.E10-11-0898
-
Mittal, S., Aslam, A., Doidge, R., Medica, R., and Winkler, G.S. (2011). The Ccr4a (CNOT6) and Ccr4b (CNOT6L) deadenylase subunits of the human Ccr4-Not complex contribute to the prevention of cell death and senescence. Mol. Biol. Cell 22, 748-758. doi: 10.1091/mbc.E10-11-0898
-
(2011)
Mol. Biol. Cell
, vol.22
, pp. 748-758
-
-
Mittal, S.1
Aslam, A.2
Doidge, R.3
Medica, R.4
Winkler, G.S.5
-
49
-
-
81255191869
-
Obesity resistance and increased hepatic expression of catabolism-related mRNAs in Cnot3+/- mice
-
doi: 10.1038/emboj.2011.320
-
Morita, M., Oike, Y., Nagashima, T., Kadomatsu, T., Tabata, M., Suzuki, T., et al. (2011). Obesity resistance and increased hepatic expression of catabolism-related mRNAs in Cnot3+/- mice. EMBO J. 30, 4678-4691. doi: 10.1038/emboj.2011.320
-
(2011)
EMBO J
, vol.30
, pp. 4678-4691
-
-
Morita, M.1
Oike, Y.2
Nagashima, T.3
Kadomatsu, T.4
Tabata, M.5
Suzuki, T.6
-
50
-
-
34347338699
-
Depletion of mammalian CCR4b deadenylase triggers elevation of the p27Kip1 mRNA level and impairs cell growth
-
doi: 10.1128/MCB.02304-06
-
Morita, M., Suzuki, T., Nakamura, T., Yokoyama, K., Miyasaka, T., and Yamamoto, T. (2007). Depletion of mammalian CCR4b deadenylase triggers elevation of the p27Kip1 mRNA level and impairs cell growth. Mol. Cell. Biol. 27, 4980-4990. doi: 10.1128/MCB.02304-06
-
(2007)
Mol. Cell. Biol
, vol.27
, pp. 4980-4990
-
-
Morita, M.1
Suzuki, T.2
Nakamura, T.3
Yokoyama, K.4
Miyasaka, T.5
Yamamoto, T.6
-
51
-
-
16344395154
-
The yeast EDC1 mRNA undergoes deadenylation-independent decapping stimulated by Not2p, Not4p, and Not5p
-
doi: 10.1038/sj.emboj.7600560
-
Muhlrad, D., and Parker, R. (2005). The yeast EDC1 mRNA undergoes deadenylation-independent decapping stimulated by Not2p, Not4p, and Not5p. EMBO J. 24, 1033-1045. doi: 10.1038/sj.emboj.7600560
-
(2005)
EMBO J
, vol.24
, pp. 1033-1045
-
-
Muhlrad, D.1
Parker, R.2
-
52
-
-
79960366105
-
Insights into the structure of the CCR4-NOT complex by electron microscopy
-
doi: 10.1016/j.febslet.2011.05.071
-
Nasertorabi, F., Batisse, C., Diepholz, M., Suck, D., and Bottcher, B. (2011). Insights into the structure of the CCR4-NOT complex by electron microscopy. FEBS Lett. 585, 2182-2186. doi: 10.1016/j.febslet.2011.05.071
-
(2011)
FEBS Lett
, vol.585
, pp. 2182-2186
-
-
Nasertorabi, F.1
Batisse, C.2
Diepholz, M.3
Suck, D.4
Bottcher, B.5
-
53
-
-
0032545665
-
Characterization of NOT5 that encodes a new component of the Not protein complex
-
doi: 10.1016/S0378-1119(97)00605-7
-
Oberholzer, U., and Collart, M.A. (1998). Characterization of NOT5 that encodes a new component of the Not protein complex. Gene 207, 61-69. doi: 10.1016/S0378-1119(97)00605-7
-
(1998)
Gene
, vol.207
, pp. 61-69
-
-
Oberholzer, U.1
Collart, M.A.2
-
54
-
-
79953150421
-
Not4 E3 ligase contributes to proteasome assembly and functional integrity in part through Ecm29
-
doi: 10.1128/MCB.01210-10
-
Panasenko, O.O., and Collart, M.A. (2011). Not4 E3 ligase contributes to proteasome assembly and functional integrity in part through Ecm29. Mol. Cell. Biol. 31, 1610-1623. doi: 10.1128/MCB.01210-10
-
(2011)
Mol. Cell. Biol
, vol.31
, pp. 1610-1623
-
-
Panasenko, O.O.1
Collart, M.A.2
-
55
-
-
84870622730
-
The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex
-
doi: 10.1093/nar/gks883
-
Petit, A.P., Wohlbold, L., Bawankar, P., Huntzinger, E., Schmidt, S., Izaurralde, E., et al. (2012). The structural basis for the interaction between the CAF1 nuclease and the NOT1 scaffold of the human CCR4-NOT deadenylase complex. Nucleic Acids Res. 40, 11058-11072. doi: 10.1093/nar/gks883
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 11058-11072
-
-
Petit, A.P.1
Wohlbold, L.2
Bawankar, P.3
Huntzinger, E.4
Schmidt, S.5
Izaurralde, E.6
-
56
-
-
0036971207
-
Characterization of mutations in NOT2 indicates that it plays an important role in maintaining the integrity of the CCR4-NOT complex
-
doi: 10.1016/S0022-2836(02)00707-6
-
Russell, P., Benson, J.D., and Denis, C.L. (2002). Characterization of mutations in NOT2 indicates that it plays an important role in maintaining the integrity of the CCR4-NOT complex.J. Mol. Biol. 322, 27-39. doi: 10.1016/S0022-2836(02)00707-6
-
(2002)
J. Mol. Biol
, vol.322
, pp. 27-39
-
-
Russell, P.1
Benson, J.D.2
Denis, C.L.3
-
57
-
-
79960928455
-
Not1 mediates recruitment of the deadenylase Caf1 to mRNAs targeted for degradation by tristetraprolin
-
doi: 10.1093/nar/gkr011
-
Sandler, H., Kreth, J., Timmers, H.T., and Stoecklin, G. (2011). Not1 mediates recruitment of the deadenylase Caf1 to mRNAs targeted for degradation by tristetraprolin. Nucleic Acids Res. 39, 4373-4386. doi: 10.1093/nar/gkr011
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 4373-4386
-
-
Sandler, H.1
Kreth, J.2
Timmers, H.T.3
Stoecklin, G.4
-
58
-
-
34548359334
-
Poly(A) nuclease interacts with the C-terminal domain of polyadenylate-binding protein domain from poly(A)-binding protein
-
doi: 10.1074/jbc.M701256200
-
Siddiqui, N., Mangus, D.A., Chang, T.C., Palermino, J.M., Shyu, A.B., and Gehring, K. (2007). Poly(A) nuclease interacts with the C-terminal domain of polyadenylate-binding protein domain from poly(A)-binding protein.J. Biol. Chem. 282, 25067-25075. doi: 10.1074/jbc.M701256200
-
(2007)
J. Biol. Chem
, vol.282
, pp. 25067-25075
-
-
Siddiqui, N.1
Mangus, D.A.2
Chang, T.C.3
Palermino, J.M.4
Shyu, A.B.5
Gehring, K.6
-
59
-
-
77953629665
-
Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation
-
doi: 10.1261/rna.2145110
-
Temme, C., Zhang, L., Kremmer, E., Ihling, C., Chartier, A., Sinz, A., et al. (2010). Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation. RNA 16, 1356-1370. doi: 10.1261/rna.2145110
-
(2010)
RNA
, vol.16
, pp. 1356-1370
-
-
Temme, C.1
Zhang, L.2
Kremmer, E.3
Ihling, C.4
Chartier, A.5
Sinz, A.6
-
60
-
-
0345832225
-
X-ray structure and activity of the yeast Pop2 protein: a nuclease subunit of the mRNA deadenylase complex
-
doi: 10.1038/sj.embor.7400020
-
Thore, S., Mauxion, F., Seraphin, B., and Suck, D. (2003). X-ray structure and activity of the yeast Pop2 protein: a nuclease subunit of the mRNA deadenylase complex. EMBO Rep. 4, 1150-1155. doi: 10.1038/sj.embor.7400020
-
(2003)
EMBO Rep
, vol.4
, pp. 1150-1155
-
-
Thore, S.1
Mauxion, F.2
Seraphin, B.3
Suck, D.4
-
61
-
-
0035830508
-
The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae
-
doi: 10.1016/S0092-8674(01)00225-2
-
Tucker, M., Valencia-Sanchez, M.A., Staples, R.R., Chen, J., Denis, C.L., and Parker, R. (2001). The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae. Cell 104, 377-386. doi: 10.1016/S0092-8674(01)00225-2
-
(2001)
Cell
, vol.104
, pp. 377-386
-
-
Tucker, M.1
Valencia-Sanchez, M.A.2
Staples, R.R.3
Chen, J.4
Denis, C.L.5
Parker, R.6
-
62
-
-
0037675801
-
Identification of multiple RNA features that influence CCR4 deadenylation activity
-
doi: 10.1074/jbc.M211794200
-
Viswanathan, P., Chen, J., Chiang, Y.C., and Denis, C.L. (2003). Identification of multiple RNA features that influence CCR4 deadenylation activity.J. Biol. Chem. 278, 14949-14955. doi: 10.1074/jbc.M211794200
-
(2003)
J. Biol. Chem
, vol.278
, pp. 14949-14955
-
-
Viswanathan, P.1
Chen, J.2
Chiang, Y.C.3
Denis, C.L.4
-
63
-
-
84877801967
-
RNA decay machines: deadenylation by the Ccr4-not and Pan2-Pan3 complexes
-
doi: 10.1016/j.bbagrm.2013.01.003
-
Wahle, E., and Winkler, G.S. (2013). RNA decay machines: deadenylation by the Ccr4-not and Pan2-Pan3 complexes. Biochim. Biophys. Acta 1829, 561-570. doi: 10.1016/j.bbagrm.2013.01.003
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, pp. 561-570
-
-
Wahle, E.1
Winkler, G.S.2
-
64
-
-
77955414733
-
Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity
-
doi: 10.1038/emboj.2010.152
-
Wang, H., Morita, M., Yang, X., Suzuki, T., Yang, W., Wang, J., et al. (2010). Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity. EMBO J. 29, 2566-2576. doi: 10.1038/emboj.2010.152
-
(2010)
EMBO J
, vol.29
, pp. 2566-2576
-
-
Wang, H.1
Morita, M.2
Yang, X.3
Suzuki, T.4
Yang, W.5
Wang, J.6
-
65
-
-
73949116438
-
The mammalian anti-proliferative BTG/Tob protein family
-
doi: 10.1002/jcp.21919
-
Winkler, G.S. (2010). The mammalian anti-proliferative BTG/Tob protein family.J. Cell. Physiol. 222, 66-72. doi: 10.1002/jcp.21919
-
(2010)
J. Cell. Physiol
, vol.222
, pp. 66-72
-
-
Winkler, G.S.1
-
66
-
-
84892401030
-
Heterogeneity complexity within the nuclease module of the Ccr4-Not complex
-
doi: 10.3389/fgene.2013.00296.
-
Winkler, G.S., and Balacco, D.L. (2013). Heterogeneity and complexity within the nuclease module of the Ccr4-Not complex. Front. Genet. 4:296. doi: 10.3389/fgene.2013.00296
-
(2013)
Front. Genet.
, vol.4
, pp. 296
-
-
Winkler, G.S.1
Balacco, D.L.2
-
67
-
-
28544450636
-
Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover
-
doi: 10.1038/nsmb1016
-
Yamashita, A., Chang, T.C., Yamashita, Y., Zhu, W., Zhong, Z., Chen, C.Y., et al. (2005). Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover. Nat. Struct. Mol. Biol. 12, 1054-1063. doi: 10.1038/nsmb1016
-
(2005)
Nat. Struct. Mol. Biol
, vol.12
, pp. 1054-1063
-
-
Yamashita, A.1
Chang, T.C.2
Yamashita, Y.3
Zhu, W.4
Zhong, Z.5
Chen, C.Y.6
-
68
-
-
57149102295
-
Crystal structures of human BTG2 and mouse TIS21 involved in suppression of CAF1 deadenylase activity
-
doi: 10.1093/nar/gkn825
-
Yang, X., Morita, M., Wang, H., Suzuki, T., Yang, W., Luo, Y., et al. (2008). Crystal structures of human BTG2 and mouse TIS21 involved in suppression of CAF1 deadenylase activity. Nucleic Acids Res. 36, 6872-6881. doi: 10.1093/nar/gkn825
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 6872-6881
-
-
Yang, X.1
Morita, M.2
Wang, H.3
Suzuki, T.4
Yang, W.5
Luo, Y.6
-
69
-
-
47549087539
-
Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells
-
doi: 10.1083/jcb.200801196
-
Zheng, D., Ezzeddine, N., Chen, C.Y., Zhu, W., He, X., and Shyu, A.B. (2008). Deadenylation is prerequisite for P-body formation and mRNA decay in mammalian cells.J. Cell Biol. 182, 89-101. doi: 10.1083/jcb.200801196
-
(2008)
J. Cell Biol
, vol.182
, pp. 89-101
-
-
Zheng, D.1
Ezzeddine, N.2
Chen, C.Y.3
Zhu, W.4
He, X.5
Shyu, A.B.6
-
70
-
-
1642483755
-
Repression of promoter activity by CNOT2, a subunit of the transcription regulatory Ccr4-not complex
-
doi: 10.1074/jbc.M311747200
-
Zwartjes, C.G., Jayne, S., Van Den Berg, D.L., and Timmers, H.T. (2004). Repression of promoter activity by CNOT2, a subunit of the transcription regulatory Ccr4-not complex.J. Biol. Chem. 279, 10848-10854. doi: 10.1074/jbc.M311747200
-
(2004)
J. Biol. Chem
, vol.279
, pp. 10848-10854
-
-
Zwartjes, C.G.1
Jayne, S.2
Van Den Berg, D.L.3
Timmers, H.T.4
|