Discovery of chromatin-associated proteins via sequence-specific capture and mass spectrometric protein identification in saccharomyces cerevisiae

Journal of Proteome Research

Volumn 13, Issue 8, 2014, Pages 3810-3825

  Kennedy Darling, Julia ^a   Guillen Ahlers, Hector ^c   Shortreed, Michael R ^a   Scalf, Mark ^a   Frey, Brian L ^a   Kendziorski, Christina ^a,b   Olivier, Michael ^c   Gasch, Audrey P ^a   Smith, Lloyd M ^a  

^a UNIVERSITY OF WISCONSIN MADISON   (United States)

^b UNIVERSITY OF WISCONSIN SCHOOL OF MEDICINE AND PUBLIC HEALTH   (United States)

^c SOUTHWEST FOUNDATION FOR BIOMEDICAL RESEARCH   (United States)

Author keywords

ChIP; chromatin; chromatin immunoprecipitation; DNA binding proteins; DNA protein interactions; GENECAPP; hybridization; HyCCAPP; mass spectrometry; proteomics; rDNA; ribosome biogenesis; transcription factors; transcriptional regulation; X element

Indexed keywords

DNA BINDING PROTEIN; OLIGONUCLEOTIDE; CHROMATIN; DNA; PROTEIN BINDING; PROTEOME; SACCHAROMYCES CEREVISIAE PROTEIN; TRANSCRIPTION FACTOR;

ARTICLE; BIOGENESIS; CELL COUNT; CELL DENSITY; CELL GROWTH; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; CROSS LINKING; CYTOLYSIS; FUNGAL CELL CULTURE; FUNGUS GROWTH; GENE EXPRESSION; HYBRIDIZATION; HYBRIDIZATION CAPTURE OF CHROMATIN ASSOCIATED PROTEINS FOR PROTEOMIC; MASS SPECTROMETRY; NONHUMAN; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; PROTEIN DNA INTERACTION; PROTEOMICS; SACCHAROMYCES CEREVISIAE; SOLUBILIZATION; ULTRASOUND; BIOLOGY; CHEMISTRY; METABOLISM; NUCLEIC ACID HYBRIDIZATION; POLYMERASE CHAIN REACTION; RIBOSOME;

CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; COMPUTATIONAL BIOLOGY; DNA; DNA-BINDING PROTEINS; MASS SPECTROMETRY; NUCLEIC ACID HYBRIDIZATION; POLYMERASE CHAIN REACTION; PROMOTER REGIONS, GENETIC; PROTEIN BINDING; PROTEIN INTERACTION MAPPING; PROTEOME; PROTEOMICS; RIBOSOMES; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION FACTORS;

EID: 84905399676     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr5004938     Document Type: Article

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