-
1
-
-
0034045964
-
Parent-of-origin effects on seed development in Arabidopsis thaliana require DNA methylation
-
Adams, S., Vinkenoog, R., Spielman, M., Dickinson, H. G., and Scott, R. J. (2000). Parent-of-origin effects on seed development in Arabidopsis thaliana require DNA methylation. Development 127: 2493-2502.
-
(2000)
Development
, vol.127
, pp. 2493-2502
-
-
Adams, S.1
Vinkenoog, R.2
Spielman, M.3
Dickinson, H.G.4
Scott, R.J.5
-
2
-
-
0037059080
-
RNA-directed DNA methylation in Arabidopsis
-
Aufsatz, W., Mette, M. F., van der Winden, J., Matzke, A. J., and Matzke, M. (2002). RNA-directed DNA methylation in Arabidopsis. Proc. Natl. Acad. Sci. USA99(suppl. 4): 16499-16506.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, Issue.SUPPL. 4
, pp. 16499-16506
-
-
Aufsatz, W.1
Mette, M.F.2
van der Winden, J.3
Matzke, A.J.4
Matzke, M.5
-
3
-
-
78649687209
-
Circadian integration of metabolism and energetics
-
Bass, J., and Takahashi, J. S. (2010). Circadian integration of metabolism and energetics. Science330: 1349-1354.
-
(2010)
Science
, vol.330
, pp. 1349-1354
-
-
Bass, J.1
Takahashi, J.S.2
-
4
-
-
77956795823
-
Heterosis
-
Birchler, J. A., Yao, H., Chudalayandi, S., Vaiman, D., andVeitia, R. A. (2010). Heterosis. Plant Cell 22: 2105-2112.
-
(2010)
Plant Cell
, vol.22
, pp. 2105-2112
-
-
Birchler, J.A.1
Yao, H.2
Chudalayandi, S.3
Vaiman, D.4
Veitia, R.A.5
-
5
-
-
0347033302
-
Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation
-
Cao, X., Aufsatz, W., Zilberman, D., Mette, M. F., Huang, M. S., Matzke, M., and Jacobsen, S. E. (2003). Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation. Curr. Biol. 13: 2212-2217.
-
(2003)
Curr. Biol.
, vol.13
, pp. 2212-2217
-
-
Cao, X.1
Aufsatz, W.2
Zilberman, D.3
Mette, M.F.4
Huang, M.S.5
Matzke, M.6
Jacobsen, S.E.7
-
6
-
-
75949117260
-
Molecular mechanisms of polyploidy and hybrid vigor
-
Chen, Z. J. (2010). Molecular mechanisms of polyploidy and hybrid vigor. Trends Plant Sci. 15: 57-71.
-
(2010)
Trends Plant Sci.
, vol.15
, pp. 57-71
-
-
Chen, Z.J.1
-
7
-
-
84879412664
-
Genomic and epigenetic insights into the molecular basesofheterosis
-
Chen, Z. J. (2013). Genomic and epigenetic insights into the molecular basesofheterosis. Nat. Rev. Genet. 14: 471-482.
-
(2013)
Nat. Rev. Genet.
, vol.14
, pp. 471-482
-
-
Chen, Z.J.1
-
8
-
-
0032447801
-
Floral dip: A simplified method for Agrobacterium-mediated transformation ofArabidopsis thaliana
-
Clough, S. J., and Bent, A. F. (1998). Floral dip: A simplified method for Agrobacterium-mediated transformation ofArabidopsis thaliana. Plant J. 16: 735-743.
-
(1998)
Plant J.
, vol.16
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
9
-
-
51749110466
-
Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development
-
Covington, M. F., Maloof, J. N., Straume, M., Kay, S. A., and Harmer, S. L. (2008). Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development. Genome Biol. 9: R130.
-
(2008)
Genome Biol.
, vol.9
-
-
Covington, M.F.1
Maloof, J.N.2
Straume, M.3
Kay, S.A.4
Harmer, S.L.5
-
10
-
-
22744451756
-
Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage
-
Dodd, A. N., Salathia, N., Hall, A., Kévei, E., Tóth, R., Nagy, F., Hibberd, J. M., Millar, A. J., andWebb, A. A. (2005). Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage. Science309: 630-633.
-
(2005)
Science
, vol.309
, pp. 630-633
-
-
Dodd, A.N.1
Salathia, N.2
Hall, A.3
Kévei, E.4
Tóth, R.5
Nagy, F.6
Hibberd, J.M.7
Millar, A.J.8
Webb, A.A.9
-
11
-
-
79960530899
-
Genomic imprinting: The emergence of an epigenetic paradigm
-
Ferguson-Smith, A. C. (2011). Genomic imprinting: the emergence of an epigenetic paradigm. Nat. Rev. Genet. 12: 565-575.
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 565-575
-
-
Ferguson-Smith, A.C.1
-
12
-
-
84860817093
-
Heterosis of Arabidopsis hybrids between C24 and Col is associated with increased photosynthesis capacity
-
Fujimoto, R., Taylor, J. M., Shirasawa, S., Peacock, W. J., and Dennis, E. S. (2012). Heterosis of Arabidopsis hybrids between C24 and Col is associated with increased photosynthesis capacity. Proc. Natl. Acad. Sci. USA109: 7109-7114.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 7109-7114
-
-
Fujimoto, R.1
Taylor, J.M.2
Shirasawa, S.3
Peacock, W.J.4
Dennis, E.S.5
-
13
-
-
77952090735
-
An RNA polymerase II-and AGO4-associated protein acts in RNA-directed DNA methylation
-
Gao, Z., et al. (2010). An RNA polymerase II-and AGO4-associated protein acts in RNA-directed DNA methylation. Nature465: 106-109.
-
(2010)
Nature
, vol.465
, pp. 106-109
-
-
Gao, Z.1
-
14
-
-
79952446665
-
Starch and the clock: The dark side of plant productivity
-
Graf, A., and Smith, A. M. (2011). Starch and the clock: the dark side of plant productivity. Trends Plant Sci. 16: 169-175.
-
(2011)
Trends Plant Sci.
, vol.16
, pp. 169-175
-
-
Graf, A.1
Smith, A.M.2
-
15
-
-
77952704133
-
Circadian control of carbohydrate availability for growth in Arabidopsis plants at night
-
Graf, A., Schlereth, A., Stitt, M., and Smith, A. M. (2010). Circadian control of carbohydrate availability for growth in Arabidopsis plants at night. Proc. Natl. Acad. Sci. USA107: 9458-9463.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 9458-9463
-
-
Graf, A.1
Schlereth, A.2
Stitt, M.3
Smith, A.M.4
-
16
-
-
79952301195
-
Changes in 24-nt siRNA levels in Arabidopsis hybrids suggest an epigenetic contribution to hybrid vigor
-
Groszmann, M., Greaves, I. K., Albertyn, Z. I., Scofield, G. N., Peacock, W. J., and Dennis, E. S. (2011). Changes in 24-nt siRNA levels in Arabidopsis hybrids suggest an epigenetic contribution to hybrid vigor. Proc. Natl. Acad. Sci. USA108: 2617-2622.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 2617-2622
-
-
Groszmann, M.1
Greaves, I.K.2
Albertyn, Z.I.3
Scofield, G.N.4
Peacock, W.J.5
Dennis, E.S.6
-
17
-
-
52649126232
-
Kismeth: Analyzer of plant methylation states through bisulfite sequencing
-
Gruntman, E., Qi, Y., Slotkin, R. K., Roeder, T., Martienssen, R. A., and Sachidanandam, R. (2008). Kismeth: Analyzer of plant methylation states through bisulfite sequencing. BMC Bioinformatics 9: 371.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 371
-
-
Gruntman, E.1
Qi, Y.2
Slotkin, R.K.3
Roeder, T.4
Martienssen, R.A.5
Sachidanandam, R.6
-
18
-
-
79960716754
-
Multisubunit RNA polymerases IV and V: Purveyors of non-coding RNA for plant gene silencing
-
Haag, J. R., and Pikaard, C. S. (2011). Multisubunit RNA polymerases IV and V: Purveyors of non-coding RNA for plant gene silencing. Nat. Rev. Mol. Cell Biol. 12: 483-492.
-
(2011)
Nat. Rev. Mol. Cell Biol.
, vol.12
, pp. 483-492
-
-
Haag, J.R.1
Pikaard, C.S.2
-
19
-
-
84885824767
-
Kin conflict in seed development: An interdependent but fractious collective
-
Haig, D. (2013). Kin conflict in seed development: An interdependent but fractious collective. Annu. Rev. Cell Dev. Biol. 29: 189-211.
-
(2013)
Annu. Rev. Cell Dev. Biol.
, vol.29
, pp. 189-211
-
-
Haig, D.1
-
20
-
-
53349101379
-
Hybrid vigor and transgenerational epigenetic effects on early mouse embryo phenotype
-
Han, Z., Mtango, N. R., Patel, B. G., Sapienza, C., and Latham, K. E. (2008). Hybrid vigor and transgenerational epigenetic effects on early mouse embryo phenotype. Biol. Reprod. 79: 638-648.
-
(2008)
Biol. Reprod.
, vol.79
, pp. 638-648
-
-
Han, Z.1
Mtango, N.R.2
Patel, B.G.3
Sapienza, C.4
Latham, K.E.5
-
21
-
-
66449087281
-
The circadian system in higher plants
-
Harmer, S. L. (2009). The circadian system in higher plants. Annu. Rev. Plant Biol. 60: 357-377.
-
(2009)
Annu. Rev. Plant Biol.
, vol.60
, pp. 357-377
-
-
Harmer, S.L.1
-
22
-
-
0034671791
-
Orchestrated transcription of key pathways in Arabidopsis by the circadian clock
-
Harmer, S. L., Hogenesch, J. B., Straume, M., Chang, H. S., Han, B., Zhu, T., Wang, X., Kreps, J. A., andKay, S. A. (2000). Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science290: 2110-2113.
-
(2000)
Science
, vol.290
, pp. 2110-2113
-
-
Harmer, S.L.1
Hogenesch, J.B.2
Straume, M.3
Chang, H.S.4
Han, B.5
Zhu, T.6
Wang, X.7
Kreps, J.A.8
Kay, S.A.9
-
23
-
-
14844295120
-
RNA polymerase IV directs silencing of endogenous DNA
-
Herr, A. J., Jensen, M. B., Dalmay, T., and Baulcombe, D. C. (2005). RNA polymerase IV directs silencing of endogenous DNA. Science 308: 118-120.
-
(2005)
Science
, vol.308
, pp. 118-120
-
-
Herr, A.J.1
Jensen, M.B.2
Dalmay, T.3
Baulcombe, D.C.4
-
24
-
-
84859508042
-
Mapping the core of the Arabidopsis circadian clock defines the network structure of the oscillator
-
Huang, W., Pérez-García, P., Pokhilko, A., Millar, A. J., Antoshechkin, I., Riechmann, J. L., and Mas, P. (2012). Mapping the core of the Arabidopsis circadian clock defines the network structure of the oscillator. Science336: 75-79.
-
(2012)
Science
, vol.336
, pp. 75-79
-
-
Huang, W.1
Pérez-García, P.2
Pokhilko, A.3
Millar, A.J.4
Antoshechkin, I.5
Riechmann, J.L.6
Mas, P.7
-
25
-
-
39749196238
-
Cellular programming of plant gene imprinting
-
Huh, J. H., Bauer, M. J., Hsieh, T. F., and Fischer, R. L. (2008). Cellular programming of plant gene imprinting. Cell132: 735-744.
-
(2008)
Cell
, vol.132
, pp. 735-744
-
-
Huh, J.H.1
Bauer, M.J.2
Hsieh, T.F.3
Fischer, R.L.4
-
26
-
-
57849139821
-
The circadian clock in Arabidopsis roots is a simplified slave version of the clock in shoots
-
James, A. B., Monreal, J. A., Nimmo, G. A., Kelly, C. L., Herzyk, P., Jenkins, G. I., and Nimmo, H. G. (2008). The circadian clock in Arabidopsis roots is a simplified slave version of the clock in shoots. Science322: 1832-1835.
-
(2008)
Science
, vol.322
, pp. 1832-1835
-
-
James, A.B.1
Monreal, J.A.2
Nimmo, G.A.3
Kelly, C.L.4
Herzyk, P.5
Jenkins, G.I.6
Nimmo, H.G.7
-
27
-
-
2642622566
-
The DNA methylation locus DDM1 is required for maintenance of gene silencing inArabidopsis
-
Jeddeloh, J. A., Bender, J., and Richards, E. J. (1998). The DNA methylation locus DDM1 is required for maintenance of gene silencing inArabidopsis. GenesDev. 12: 1714-1725.
-
(1998)
GenesDev.
, vol.12
, pp. 1714-1725
-
-
Jeddeloh, J.A.1
Bender, J.2
Richards, E.J.3
-
28
-
-
0032907728
-
Maintenance of genomic methylation requiresa SWI2/SNF2-like protein
-
Jeddeloh, J. A., Stokes, T. L., and Richards, E. J. (1999). Maintenance of genomic methylation requiresa SWI2/SNF2-like protein. Nat. Genet. 22: 94-97.
-
(1999)
Nat. Genet.
, vol.22
, pp. 94-97
-
-
Jeddeloh, J.A.1
Stokes, T.L.2
Richards, E.J.3
-
29
-
-
0037354734
-
Arabidopsis MET1 cytosine methyltransferase mutants
-
Kankel, M. W., Ramsey, D. E., Stokes, T. L., Flowers, S. K., Haag, J. R., Jeddeloh, J. A., Riddle, N. C., Verbsky, M. L., and Richards, E. J. (2003). Arabidopsis MET1 cytosine methyltransferase mutants. Genetics163: 1109-1122.
-
(2003)
Genetics
, vol.163
, pp. 1109-1122
-
-
Kankel, M.W.1
Ramsey, D.E.2
Stokes, T.L.3
Flowers, S.K.4
Haag, J.R.5
Jeddeloh, J.A.6
Riddle, N.C.7
Verbsky, M.L.8
Richards, E.J.9
-
30
-
-
53149149377
-
Identification of the candidate genes regulated by RNA-directed DNA methylation in Arabidopsis
-
Kurihara, Y., Matsui, A., Kawashima, M., Kaminuma, E., Ishida, J., Morosawa, T., Mochizuki, Y., Kobayashi, N., Toyoda, T., Shinozaki, K., and Seki, M. (2008). Identification of the candidate genes regulated by RNA-directed DNA methylation in Arabidopsis. Biochem. Biophys. Res. Commun. 376: 553-557.
-
(2008)
Biochem. Biophys. Res. Commun.
, vol.376
, pp. 553-557
-
-
Kurihara, Y.1
Matsui, A.2
Kawashima, M.3
Kaminuma, E.4
Ishida, J.5
Morosawa, T.6
Mochizuki, Y.7
Kobayashi, N.8
Toyoda, T.9
Shinozaki, K.10
Seki, M.11
-
31
-
-
77249170184
-
Establishing, maintaining and modifying DNA methylation patterns in plants and animals
-
Law, J. A., and Jacobsen, S. E. (2010). Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat. Rev. Genet. 11: 204-220.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 204-220
-
-
Law, J.A.1
Jacobsen, S.E.2
-
32
-
-
84879417659
-
Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1
-
Law, J. A., Du, J., Hale, C. J., Feng, S., Krajewski, K., Palanca, A. M., Strahl, B. D., Patel, D. J., andJacobsen, S. E. (2013). Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature498: 385-389.
-
(2013)
Nature
, vol.498
, pp. 385-389
-
-
Law, J.A.1
Du, J.2
Hale, C.J.3
Feng, S.4
Krajewski, K.5
Palanca, A.M.6
Strahl, B.D.7
Patel, D.J.8
Jacobsen, S.E.9
-
33
-
-
69249145607
-
Identification of heterotic metabolite QTL inArabidopsis thalianaRIL and IL populations
-
Lisec, J., Steinfath, M., Meyer, R. C., Selbig, J., Melchinger, A. E., Willmitzer, L., and Altmann, T. (2009). Identification of heterotic metabolite QTL inArabidopsis thalianaRIL and IL populations. Plant J. 59: 777-788.
-
(2009)
Plant J.
, vol.59
, pp. 777-788
-
-
Lisec, J.1
Steinfath, M.2
Meyer, R.C.3
Selbig, J.4
Melchinger, A.E.5
Willmitzer, L.6
Altmann, T.7
-
34
-
-
84859464802
-
Maternal siRNAs as regulators of parental genome imbalance and gene expression in endosperm of Arabidopsis seeds
-
Lu, J., Zhang, C., Baulcombe, D. C., and Chen, Z. J. (2012). Maternal siRNAs as regulators of parental genome imbalance and gene expression in endosperm of Arabidopsis seeds. Proc. Natl. Acad. Sci. USA109: 5529-5534.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 5529-5534
-
-
Lu, J.1
Zhang, C.2
Baulcombe, D.C.3
Chen, Z.J.4
-
35
-
-
33745456764
-
Plant circadian rhythms
-
McClung, C. R. (2006). Plant circadian rhythms. Plant Cell 18: 792-803.
-
(2006)
Plant Cell
, vol.18
, pp. 792-803
-
-
McClung, C.R.1
-
36
-
-
19944428174
-
Transgene-induced RNA interference as a tool for plant functional genomics
-
McGinnis, K., Chandler, V., Cone, K., Kaeppler, H., Kaeppler, S., Kerschen, A., Pikaard, C., Richards, E., Sidorenko, L., Smith, T., Springer, N., and Wulan, T. (2005). Transgene-induced RNA interference as a tool for plant functional genomics. Methods Enzymol. 392: 1-24.
-
(2005)
Methods Enzymol.
, vol.392
, pp. 1-24
-
-
McGinnis, K.1
Chandler, V.2
Cone, K.3
Kaeppler, H.4
Kaeppler, S.5
Kerschen, A.6
Pikaard, C.7
Richards, E.8
Sidorenko, L.9
Smith, T.10
Springer, N.11
Wulan, T.12
-
37
-
-
1942533595
-
Heterosis of biomass production in Arabidopsis. Establishment during early development
-
Meyer, R. C., Törjék, O., Becher, M., and Altmann, T. (2004). Heterosis of biomass production in Arabidopsis. Establishment during early development. Plant Physiol. 134: 1813-1823.
-
(2004)
Plant Physiol.
, vol.134
, pp. 1813-1823
-
-
Meyer, R.C.1
Törjék, O.2
Becher, M.3
Altmann, T.4
-
38
-
-
84864594234
-
Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids
-
Meyer, R. C., et al. (2012). Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. Plant J. 71: 669-683.
-
(2012)
Plant J.
, vol.71
, pp. 669-683
-
-
Meyer, R.C.1
-
39
-
-
84879420693
-
Ploidy and hybridity effects on growth vigor and gene expression inArabidopsis thaliana hybrids and their parents
-
Miller, M., Zhang, C., and Chen, Z. J. (2012). Ploidy and hybridity effects on growth vigor and gene expression inArabidopsis thaliana hybrids and their parents. G3 (Bethesda)2: 505-513.
-
(2012)
G3 (Bethesda)
, vol.2
, pp. 505-513
-
-
Miller, M.1
Zhang, C.2
Chen, Z.J.3
-
40
-
-
0025958320
-
Genomic imprinting in mammalian development: A parental tug-of-war
-
Moore, T., and Haig, D. (1991). Genomic imprinting in mammalian development: A parental tug-of-war. Trends Genet. 7: 45-49.
-
(1991)
Trends Genet.
, vol.7
, pp. 45-49
-
-
Moore, T.1
Haig, D.2
-
41
-
-
67650461957
-
Uniparental expression of PolIVdependent siRNAs in developing endosperm of Arabidopsis
-
Mosher, R. A., Melnyk, C. W., Kelly, K. A., Dunn, R. M., Studholme, D. J., and Baulcombe, D. C. (2009). Uniparental expression of PolIVdependent siRNAs in developing endosperm of Arabidopsis. Nature 460: 283-286.
-
(2009)
Nature
, vol.460
, pp. 283-286
-
-
Mosher, R.A.1
Melnyk, C.W.2
Kelly, K.A.3
Dunn, R.M.4
Studholme, D.J.5
Baulcombe, D.C.6
-
42
-
-
84982358134
-
A revised medium for rapid growth and bioassays with tobacco tissue culture
-
Murashige, T., and Skoog, F. (1962). A revised medium for rapid growth and bioassays with tobacco tissue culture. Physiol. Plant. 15: 473-497.
-
(1962)
Physiol. Plant.
, vol.15
, pp. 473-497
-
-
Murashige, T.1
Skoog, F.2
-
43
-
-
84865204375
-
Complexity in the wiring and regulation of plant circadian networks
-
Nagel, D. H., and Kay, S. A. (2012). Complexity in the wiring and regulation of plant circadian networks. Curr. Biol. 22: R648-R657.
-
(2012)
Curr. Biol.
, vol.22
-
-
Nagel, D.H.1
Kay, S.A.2
-
44
-
-
65549118773
-
Circadian control of the NAD+ salvage pathway by CLOCK-SIRT1
-
Nakahata, Y., Sahar, S., Astarita, G., Kaluzova, M., and SassoneCorsi, P. (2009). Circadian control of the NAD+ salvage pathway by CLOCK-SIRT1. Science324: 654-657.
-
(2009)
Science
, vol.324
, pp. 654-657
-
-
Nakahata, Y.1
Sahar, S.2
Astarita, G.3
Kaluzova, M.4
SassoneCorsi, P.5
-
45
-
-
58249105076
-
Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids
-
Ni, Z., Kim, E. D., Ha, M., Lackey, E., Liu, J., Zhang, Y., Sun, Q., and Chen, Z. J. (2009). Altered circadian rhythms regulate growth vigour in hybrids and allopolyploids. Nature 457: 327-331.
-
(2009)
Nature
, vol.457
, pp. 327-331
-
-
Ni, Z.1
Kim, E.D.2
Ha, M.3
Lackey, E.4
Liu, J.5
Zhang, Y.6
Sun, Q.7
Chen, Z.J.8
-
46
-
-
84874951322
-
Circadian control of chloroplast transcription by a nuclear-encoded timing signal
-
Noordally, Z. B., Ishii, K., Atkins, K. A., Wetherill, S. J., Kusakina, J., Walton, E. J., Kato, M., Azuma, M., Tanaka, K., Hanaoka, M., and Dodd, A. N. (2013). Circadian control of chloroplast transcription by a nuclear-encoded timing signal. Science339: 1316-1319.
-
(2013)
Science
, vol.339
, pp. 1316-1319
-
-
Noordally, Z.B.1
Ishii, K.2
Atkins, K.A.3
Wetherill, S.J.4
Kusakina, J.5
Walton, E.J.6
Kato, M.7
Azuma, M.8
Tanaka, K.9
Hanaoka, M.10
Dodd, A.N.11
-
47
-
-
14844302397
-
Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation
-
Onodera, Y., Haag, J. R., Ream, T., Costa Nunes, P., Pontes, O., and Pikaard, C. S. (2005). Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120: 613-622.
-
(2005)
Cell
, vol.120
, pp. 613-622
-
-
Onodera, Y.1
Haag, J.R.2
Ream, T.3
Costa Nunes, P.4
Pontes, O.5
Pikaard, C.S.6
-
48
-
-
70349243166
-
A role for multiple circadian clock genes in the response to signals that break seed dormancy in Arabidopsis
-
Penfield, S., and Hall, A. (2009). A role for multiple circadian clock genes in the response to signals that break seed dormancy in Arabidopsis. PlantCell21: 1722-1732.
-
(2009)
PlantCell
, vol.21
, pp. 1722-1732
-
-
Penfield, S.1
Hall, A.2
-
49
-
-
0031159538
-
Quantitative analysis of Drosophila period gene transcription in living animals
-
Plautz, J. D., Straume, M., Stanewsky, R., Jamison, C. F., Brandes, C., Dowse, H. B., Hall, J. C., andKay, S. A. (1997). Quantitative analysis of Drosophila period gene transcription in living animals. J. Biol. Rhythms12: 204-217.
-
(1997)
J. Biol. Rhythms
, vol.12
, pp. 204-217
-
-
Plautz, J.D.1
Straume, M.2
Stanewsky, R.3
Jamison, C.F.4
Brandes, C.5
Dowse, H.B.6
Hall, J.C.7
Kay, S.A.8
-
50
-
-
45249107092
-
Molecular clocks, type 2 diabetes and cardiovascular disease
-
Prasai, M. J., George, J. T., and Scott, E. M. (2008). Molecular clocks, type 2 diabetes and cardiovascular disease. Diab. Vasc. Dis. Res. 5: 89-95.
-
(2008)
Diab. Vasc. Dis. Res.
, vol.5
, pp. 89-95
-
-
Prasai, M.J.1
George, J.T.2
Scott, E.M.3
-
51
-
-
62449114708
-
A functional genomicsapproach reveals CHE as a component of the Arabidopsis circadian clock
-
Pruneda-Paz, J. L., Breton, G., Para, A., and Kay, S. A. (2009). A functional genomicsapproach reveals CHE as a component of the Arabidopsis circadian clock. Science323: 1481-1485.
-
(2009)
Science
, vol.323
, pp. 1481-1485
-
-
Pruneda-Paz, J.L.1
Breton, G.2
Para, A.3
Kay, S.A.4
-
52
-
-
79952293152
-
Regulation andflexibility of genomic imprinting during seed development
-
Raissig, M. T., Baroux, C., and Grossniklaus, U. (2011). Regulation andflexibility of genomic imprinting during seed development. Plant Cell23: 16-26.
-
(2011)
Plant Cell
, vol.23
, pp. 16-26
-
-
Raissig, M.T.1
Baroux, C.2
Grossniklaus, U.3
-
53
-
-
78651271733
-
Integrative genomics viewer
-
Robinson, J. T., Thorvaldsdóttir, H., Winckler, W., Guttman, M., Lander, E. S., Getz, G., and Mesirov, J. P. (2011). Integrative genomics viewer. Nat. Biotechnol. 29: 24-26.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 24-26
-
-
Robinson, J.T.1
Thorvaldsdóttir, H.2
Winckler, W.3
Guttman, M.4
Lander, E.S.5
Getz, G.6
Mesirov, J.P.7
-
54
-
-
20444382245
-
PSEUDO-RESPONSE REGULATOR 7and9are partially redundant genes essential for the temperature responsiveness of the Arabidopsiscircadian clock
-
Salomé, P. A., and McClung, C. R. (2005). PSEUDO-RESPONSE REGULATOR 7and9are partially redundant genes essential for the temperature responsiveness of the Arabidopsiscircadian clock. Plant Cell17: 791-803
-
(2005)
Plant Cell
, vol.17
, pp. 791-803
-
-
Salomé, P.A.1
McClung, C.R.2
-
55
-
-
84860109530
-
Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsisecotypes and their reciprocal hybrids
-
Shen, H., He, H., Li, J., Chen, W., Wang, X., Guo, L., Peng, Z., He, G., Zhong, S., Qi, Y., Terzaghi, W., and Deng, X. W. (2012). Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsisecotypes and their reciprocal hybrids. Plant Cell24: 875-892.
-
(2012)
Plant Cell
, vol.24
, pp. 875-892
-
-
Shen, H.1
He, H.2
Li, J.3
Chen, W.4
Wang, X.5
Guo, L.6
Peng, Z.7
He, G.8
Zhong, S.9
Qi, Y.10
Terzaghi, W.11
Deng, X.W.12
-
56
-
-
14744275289
-
Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves
-
Smith, S. M., Fulton, D. C., Chia, T., Thorneycroft, D., Chapple, A., Dunstan, H., Hylton, C., Zeeman, S. C., and Smith, A. M. (2004). Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves. Plant Physiol. 136: 2687-2699.
-
(2004)
Plant Physiol.
, vol.136
, pp. 2687-2699
-
-
Smith, S.M.1
Fulton, D.C.2
Chia, T.3
Thorneycroft, D.4
Chapple, A.5
Dunstan, H.6
Hylton, C.7
Zeeman, S.C.8
Smith, A.M.9
-
57
-
-
78649853497
-
Comparative transcriptional profiling and preliminary study on heterosis mechanism of super-hybrid rice
-
Song, G. S., et al. (2010). Comparative transcriptional profiling and preliminary study on heterosis mechanism of super-hybrid rice. Mol. Plant3: 1012-1025.
-
(2010)
Mol. Plant
, vol.3
, pp. 1012-1025
-
-
Song, G.S.1
-
58
-
-
20844461135
-
Obesity and metabolic syndrome in circadianClockmutant mice
-
Turek, F. W., et al. (2005). Obesity and metabolic syndrome in circadianClockmutant mice. Science308: 1043-1045.
-
(2005)
Science
, vol.308
, pp. 1043-1045
-
-
Turek, F.W.1
-
59
-
-
0028031830
-
RNA-directed de novo methylation of genomic sequences in plants
-
Wassenegger, M., Heimes, S., Riedel, L., and Sänger, H. L. (1994). RNA-directed de novo methylation of genomic sequences in plants. Cell76: 567-576.
-
(1994)
Cell
, vol.76
, pp. 567-576
-
-
Wassenegger, M.1
Heimes, S.2
Riedel, L.3
Sänger, H.L.4
-
60
-
-
33845611615
-
Interplay of circadian clocks and metabolic rhythms
-
Wijnen, H., and Young, M. W. (2006). Interplay of circadian clocks and metabolic rhythms. Annu. Rev. Genet. 40: 409-448.
-
(2006)
Annu. Rev. Genet.
, vol.40
, pp. 409-448
-
-
Wijnen, H.1
Young, M.W.2
-
61
-
-
33751087754
-
Regulation of seed size by hypomethylation of maternal and paternal genomes
-
Xiao, W., Brown, R. C., Lemmon, B. E., Harada, J. J., Goldberg, R. B., and Fischer, R. L. (2006). Regulation of seed size by hypomethylation of maternal and paternal genomes. Plant Physiol. 142: 1160-1168.
-
(2006)
Plant Physiol.
, vol.142
, pp. 1160-1168
-
-
Xiao, W.1
Brown, R.C.2
Lemmon, B.E.3
Harada, J.J.4
Goldberg, R.B.5
Fischer, R.L.6
-
62
-
-
84875741680
-
The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
-
Zemach, A., Kim, M. Y., Hsieh, P. H., Coleman-Derr, D., EshedWilliams, L., Thao, K., Harmer, S. L., and Zilberman, D. (2013). The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin. Cell 153: 193-205.
-
(2013)
Cell
, vol.153
, pp. 193-205
-
-
Zemach, A.1
Kim, M.Y.2
Hsieh, P.H.3
Coleman-Derr, D.4
EshedWilliams, L.5
Thao, K.6
Harmer, S.L.7
Zilberman, D.8
-
63
-
-
33748629119
-
Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis
-
Zhang, X., Yazaki, J., Sundaresan, A., Cokus, S., Chan, S. W., Chen, H., Henderson, I. R., Shinn, P., Pellegrini, M., Jacobsen, S. E., and Ecker, J. R. (2006). Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis. Cell126: 1189-1201.
-
(2006)
Cell
, vol.126
, pp. 1189-1201
-
-
Zhang, X.1
Yazaki, J.2
Sundaresan, A.3
Cokus, S.4
Chan, S.W.5
Chen, H.6
Henderson, I.R.7
Shinn, P.8
Pellegrini, M.9
Jacobsen, S.E.10
Ecker, J.R.11
-
64
-
-
3142640878
-
Role of ArabidopsisARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats
-
Zilberman, D., Cao, X., Johansen, L. K., Xie, Z., Carrington, J. C., and Jacobsen, S. E. (2004). Role of ArabidopsisARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats. Curr. Biol. 14: 1214-1220.
-
(2004)
Curr. Biol.
, vol.14
, pp. 1214-1220
-
-
Zilberman, D.1
Cao, X.2
Johansen, L.K.3
Xie, Z.4
Carrington, J.C.5
Jacobsen, S.E.6
-
65
-
-
33845880624
-
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
-
Zilberman, D., Gehring, M., Tran, R. K., Ballinger, T., and Henikoff, S. (2007). Genome-wide analysis of Arabidopsis thalianaDNA methylation uncovers an interdependence between methylation and transcription. Nat. Genet. 39: 61-69.
-
(2007)
Nat. Genet.
, vol.39
, pp. 61-69
-
-
Zilberman, D.1
Gehring, M.2
Tran, R.K.3
Ballinger, T.4
Henikoff, S.5
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