메뉴 건너뛰기




Volumn 108, Issue 6, 2011, Pages 2617-2622

Changes in 24-nt siRNA levels in Arabidopsis hybrids suggest an epigenetic contribution to hybrid vigor

Author keywords

Epigenome; Transacting siRNA; Transmethylation; Transposons; Yield increase

Indexed keywords

DNA; SMALL INTERFERING RNA;

EID: 79952301195     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1019217108     Document Type: Article
Times cited : (265)

References (38)
  • 1
    • 0002104372 scopus 로고
    • Beginnings of the heterosis concept
    • ed Gowan JW (Iowa State College Press, Ames, IA)
    • Shull GH (1952) Beginnings of the heterosis concept. Heterosis, ed Gowan JW (Iowa State College Press, Ames, IA), pp 14-48.
    • (1952) Heterosis , pp. 14-48
    • Shull, G.H.1
  • 2
    • 75949117260 scopus 로고    scopus 로고
    • Molecular mechanisms of polyploidy and hybrid vigor
    • Chen ZJ (2010) Molecular mechanisms of polyploidy and hybrid vigor. Trends Plant Sci 15:57-71.
    • (2010) Trends Plant Sci , vol.15 , pp. 57-71
    • Chen, Z.J.1
  • 3
    • 34548395815 scopus 로고    scopus 로고
    • Towards the molecular basis of heterosis
    • DOI 10.1016/j.tplants.2007.08.005, PII S1360138507001847
    • Hochholdinger F, Hoecker N (2007) Towards the molecular basis of heterosis. Trends Plant Sci 12:427-432. (Pubitemid 47362796)
    • (2007) Trends in Plant Science , vol.12 , Issue.9 , pp. 427-432
    • Hochholdinger, F.1    Hoecker, N.2
  • 4
    • 33846543858 scopus 로고    scopus 로고
    • Heterosis: Revisiting the magic
    • DOI 10.1016/j.tig.2006.12.006, PII S0168952506004094
    • Lippman ZB, Zamir D (2007) Heterosis: Revisiting the magic. Trends Genet 23:60-66. (Pubitemid 46161217)
    • (2007) Trends in Genetics , vol.23 , Issue.2 , pp. 60-66
    • Lippman, Z.B.1    Zamir, D.2
  • 5
    • 75849142760 scopus 로고    scopus 로고
    • QTL analysis of early stage heterosis for biomass in Arabidopsis
    • Meyer RC, et al. (2010) QTL analysis of early stage heterosis for biomass in Arabidopsis. Theor Appl Genet 120:227-237.
    • (2010) Theor Appl Genet , vol.120 , pp. 227-237
    • Meyer, R.C.1
  • 7
    • 34548587365 scopus 로고    scopus 로고
    • Classical genetic and quantitative trait loci analyses of heterosis in a maize hybrid between two elite inbred lines
    • DOI 10.1534/genetics.106.064493
    • Frascaroli E, et al. (2007) Classical genetic and quantitative trait loci analyses of heterosis in a maize hybrid between two elite inbred lines. Genetics 176:625-644. (Pubitemid 350021052)
    • (2007) Genetics , vol.176 , Issue.1 , pp. 625-644
    • Frascaroli, E.1    Cane, M.A.2    Landi, P.3    Pea, G.4    Gianfranceschi, L.5    Villa, M.6    Morgante, M.7    Pe, M.E.8
  • 8
    • 52049124217 scopus 로고    scopus 로고
    • Genetic analysis of heterosis for yield and yield components in rapeseed (Brassica napus L.) by quantitative trait locus mapping
    • Radoev M, Becker HC, Ecke W (2008) Genetic analysis of heterosis for yield and yield components in rapeseed (Brassica napus L.) by quantitative trait locus mapping. Genetics 179:1547-1558.
    • (2008) Genetics , vol.179 , pp. 1547-1558
    • Radoev, M.1    Becker, H.C.2    Ecke, W.3
  • 10
    • 77951769145 scopus 로고    scopus 로고
    • The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato
    • Krieger U, Lippman ZB, Zamir D (2010) The flowering gene SINGLE FLOWER TRUSS drives heterosis for yield in tomato. Nat Genet 42:459-463.
    • (2010) Nat Genet , vol.42 , pp. 459-463
    • Krieger, U.1    Lippman, Z.B.2    Zamir, D.3
  • 12
    • 1942533595 scopus 로고    scopus 로고
    • Heterosis of biomass production in Arabidopsis. Establishment during early development
    • Meyer RC, Törjék O, Becher M, Altmann T (2004) Heterosis of biomass production in Arabidopsis. Establishment during early development. Plant Physiol 134:1813-1823.
    • (2004) Plant Physiol , vol.134 , pp. 1813-1823
    • Meyer, R.C.1    Törjék, O.2    Becher, M.3    Altmann, T.4
  • 13
    • 77950346035 scopus 로고    scopus 로고
    • Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids
    • He GM, et al. (2010) Global epigenetic and transcriptional trends among two rice subspecies and their reciprocal hybrids. Plant Cell 22:17-33.
    • (2010) Plant Cell , vol.22 , pp. 17-33
    • He, G.M.1
  • 14
    • 1842301272 scopus 로고
    • Genetic diversity and heterosis in Nicotiana
    • Matzinger DF, Wernsman EA (1967) Genetic diversity and heterosis in Nicotiana. Zuchter 37:188-191.
    • (1967) Zuchter , vol.37 , pp. 188-191
    • Matzinger, D.F.1    Wernsman, E.A.2
  • 15
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law JA, Jacobsen SE (2010) Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11:204-220.
    • (2010) Nat Rev Genet , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 16
    • 33947236065 scopus 로고    scopus 로고
    • Genome-wide profiling and analysis of Arabidopsis siRNAs
    • Kasschau KD, et al. (2007) Genome-wide profiling and analysis of Arabidopsis siRNAs. PLoS Biol 5:e57.
    • (2007) PLoS Biol , vol.5
    • Kasschau, K.D.1
  • 17
    • 77950518292 scopus 로고    scopus 로고
    • siRNAs and DNA methylation: Seedy epigenetics
    • Mosher RA, Melnyk CW (2010) siRNAs and DNA methylation: Seedy epigenetics. Trends Plant Sci 15:204-210.
    • (2010) Trends Plant Sci , vol.15 , pp. 204-210
    • Mosher, R.A.1    Melnyk, C.W.2
  • 18
    • 34249330696 scopus 로고    scopus 로고
    • Epigenetic inheritance in plants
    • DOI 10.1038/nature05917, PII NATURE05917
    • Henderson IR, Jacobsen SE (2007) Epigenetic inheritance in plants. Nature 447:418-424. (Pubitemid 46816748)
    • (2007) Nature , vol.447 , Issue.7143 , pp. 418-424
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 19
    • 33847208871 scopus 로고    scopus 로고
    • Timescales of genetic and epigenetic inheritance
    • Rando OJ, Verstrepen KJ (2007) Timescales of genetic and epigenetic inheritance. Cell 128:655-668.
    • (2007) Cell , vol.128 , pp. 655-668
    • Rando, O.J.1    Verstrepen, K.J.2
  • 20
    • 43249131622 scopus 로고    scopus 로고
    • Small RNA-directed epigenetic natural variation in Arabidopsis thaliana
    • Zhai J, et al. (2008) Small RNA-directed epigenetic natural variation in Arabidopsis thaliana. PLoS Genet 4:e1000056.
    • (2008) PLoS Genet , vol.4
    • Zhai, J.1
  • 21
    • 34347327677 scopus 로고    scopus 로고
    • Epigenetic natural variation in Arabidopsis thaliana
    • Vaughn MW, et al. (2007) Epigenetic natural variation in Arabidopsis thaliana. PLoS Biol 5:e174.
    • (2007) PLoS Biol , vol.5
    • Vaughn, M.W.1
  • 22
    • 70449588694 scopus 로고    scopus 로고
    • Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids
    • Ha MS, et al. (2009) Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids. Proc Natl Acad Sci USA 106:17835-17840.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 17835-17840
    • Ha, M.S.1
  • 23
    • 77953807770 scopus 로고    scopus 로고
    • Repeat elements and the Arabidopsis DNA methylation landscape
    • Teixeira FK, Colot V (2010) Repeat elements and the Arabidopsis DNA methylation landscape. Heredity 105:14-23.
    • (2010) Heredity , vol.105 , pp. 14-23
    • Teixeira, F.K.1    Colot, V.2
  • 24
    • 0347033302 scopus 로고    scopus 로고
    • Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation
    • Cao XF, et al. (2003) Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation. Curr Biol 13:2212-2217.
    • (2003) Curr Biol , vol.13 , pp. 2212-2217
    • Cao, X.F.1
  • 25
    • 1442305898 scopus 로고    scopus 로고
    • RNA silencing genes control de novo DNA methylation
    • Chan SWL, et al. (2004) RNA silencing genes control de novo DNA methylation. Science 303:1336.
    • (2004) Science , vol.303 , pp. 1336
    • Chan, S.W.L.1
  • 26
    • 0037058968 scopus 로고    scopus 로고
    • Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes
    • Cao XF, Jacobsen SE (2002) Locus-specific control of asymmetric and CpNpG methylation by the DRM and CMT3 methyltransferase genes. Proc Natl Acad Sci USA 99(Suppl 4):16491-16498.
    • (2002) Proc Natl Acad Sci USA , vol.99 , Issue.SUPPL. 4 , pp. 16491-16498
    • Cao, X.F.1    Jacobsen, S.E.2
  • 27
    • 0037046810 scopus 로고    scopus 로고
    • Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing
    • Cao XF, Jacobsen SE (2002) Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing. Curr Biol 12:1138-1144.
    • (2002) Curr Biol , vol.12 , pp. 1138-1144
    • Cao, X.F.1    Jacobsen, S.E.2
  • 28
    • 33745726564 scopus 로고    scopus 로고
    • RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis
    • Chan SWL, et al. (2006) RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis. PLoS Genet 2:e83.
    • (2006) PLoS Genet , vol.2
    • Chan, S.W.L.1
  • 29
    • 45349108094 scopus 로고    scopus 로고
    • Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading
    • DOI 10.1101/gad.1667808
    • Henderson IR, Jacobsen SE (2008) Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading. Genes Dev 22:1597-1606. (Pubitemid 351846840)
    • (2008) Genes and Development , vol.22 , Issue.12 , pp. 1597-1606
    • Henderson, I.R.1    Jacobsen, S.E.2
  • 30
    • 72549089751 scopus 로고    scopus 로고
    • A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development
    • He XJ, et al. (2009) A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development. Genes Dev 23:2717-2722.
    • (2009) Genes Dev , vol.23 , pp. 2717-2722
    • He, X.J.1
  • 31
    • 33748629119 scopus 로고    scopus 로고
    • Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis
    • Zhang XY, et al. (2006) Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. Cell 126:1189-1201.
    • (2006) Cell , vol.126 , pp. 1189-1201
    • Zhang, X.Y.1
  • 33
    • 73649118150 scopus 로고    scopus 로고
    • Loss of RNA-dependent RNA polymerase 2 (RDR2) function causes widespread and unexpected changes in the expression of transposons, genes, and 24-nt small RNAs
    • Jia Y, et al. (2009) Loss of RNA-dependent RNA polymerase 2 (RDR2) function causes widespread and unexpected changes in the expression of transposons, genes, and 24-nt small RNAs. PLoS Genet 5:e1000737.
    • (2009) PLoS Genet , vol.5
    • Jia, Y.1
  • 34
    • 77958192006 scopus 로고    scopus 로고
    • Identification of RNA-dependent DNA-methylation regulated promoters in Arabidopsis
    • Baev V, et al. (2010) Identification of RNA-dependent DNA-methylation regulated promoters in Arabidopsis. Plant Physiol Biochem 48:393-400.
    • (2010) Plant Physiol Biochem , vol.48 , pp. 393-400
    • Baev, V.1
  • 35
    • 0033637356 scopus 로고    scopus 로고
    • The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene
    • Soppe WJJ, et al. (2000) The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene. Mol Cell 6:791-802.
    • (2000) Mol Cell , vol.6 , pp. 791-802
    • Soppe, W.J.J.1
  • 36
    • 63649095568 scopus 로고    scopus 로고
    • Possible involvement of DNA methylation on expression regulation of carrot LEC1 gene in its 5?-upstream region
    • Shibukawa T, Yazawa K, Kikuchi A, Kamada H (2009) Possible involvement of DNA methylation on expression regulation of carrot LEC1 gene in its 5?-upstream region. Gene 437:22-31.
    • (2009) Gene , vol.437 , pp. 22-31
    • Shibukawa, T.1    Yazawa, K.2    Kikuchi, A.3    Kamada, H.4
  • 37
    • 60849099327 scopus 로고    scopus 로고
    • RNA-directed DNA methylation induces transcriptional activation in plants
    • Shibuya K, Fukushima S, Takatsuji H (2009) RNA-directed DNA methylation induces transcriptional activation in plants. Proc Natl Acad Sci USA 106:1660-1665.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 1660-1665
    • Shibuya, K.1    Fukushima, S.2    Takatsuji, H.3
  • 38
    • 42749087226 scopus 로고    scopus 로고
    • Highly integrated single-base resolution maps of the epigenome in Arabidopsis
    • Lister R, et al. (2008) Highly integrated single-base resolution maps of the epigenome in Arabidopsis. Cell 133:523-536.
    • (2008) Cell , vol.133 , pp. 523-536
    • Lister, R.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.