-
1
-
-
35348996554
-
Specialization and evolution of endogenous small RNA pathways
-
Chapman E.J., and Carrington J.C. Specialization and evolution of endogenous small RNA pathways. Nat. Rev. Genet. 8 (2007) 884-896
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 884-896
-
-
Chapman, E.J.1
Carrington, J.C.2
-
2
-
-
33947236065
-
Genome-wide profiling and analysis of Arabidopsis siRNAs
-
Kasschau K.D., Fahlgren N., Chapman E.J., Sullivan C.M., Cumbie J.S., Givan S.A., and Carrington J.C. Genome-wide profiling and analysis of Arabidopsis siRNAs. PLoS Biol. 5 (2007) e57
-
(2007)
PLoS Biol.
, vol.5
-
-
Kasschau, K.D.1
Fahlgren, N.2
Chapman, E.J.3
Sullivan, C.M.4
Cumbie, J.S.5
Givan, S.A.6
Carrington, J.C.7
-
3
-
-
33748629119
-
Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis
-
Zhang X., Yazaki J., Sundaresan A., Cokus S., Chan S.W., Chen H., Henderson I.R., Shinn P., Pellegrini M., Jacobsen S.E., and Ecker J.R. Genome-wide high-resolution mapping and functional analysis of DNA methylation in Arabidopsis. Cell 126 (2006) 1189-1201
-
(2006)
Cell
, vol.126
, pp. 1189-1201
-
-
Zhang, X.1
Yazaki, J.2
Sundaresan, A.3
Cokus, S.4
Chan, S.W.5
Chen, H.6
Henderson, I.R.7
Shinn, P.8
Pellegrini, M.9
Jacobsen, S.E.10
Ecker, J.R.11
-
4
-
-
1442305898
-
RNA silencing genes control de novo DNA methylation
-
Chan S.W., Zilberman D., Xie Z., Johansen L.K., Carrington J.C., and Jacobsen S.E. RNA silencing genes control de novo DNA methylation. Science 303 (2004) 1336
-
(2004)
Science
, vol.303
, pp. 1336
-
-
Chan, S.W.1
Zilberman, D.2
Xie, Z.3
Johansen, L.K.4
Carrington, J.C.5
Jacobsen, S.E.6
-
5
-
-
14844295120
-
RNA polymerase IV directs silencing of endogenous DNA
-
Herr A.J., Jensen M.B., Dalmay T., and Baulcombe D.C. RNA polymerase IV directs silencing of endogenous DNA. Science 308 (2005) 118-120
-
(2005)
Science
, vol.308
, pp. 118-120
-
-
Herr, A.J.1
Jensen, M.B.2
Dalmay, T.3
Baulcombe, D.C.4
-
6
-
-
22844447304
-
Atypical RNA polymerase subunits required for RNA-directed DNA methylation
-
Kanno T., Huettel B., Mette M.F., Aufsatz W., Jaligot E., Daxinger L., Kreil D.P., Matzke M., and Matzke A.J.M. Atypical RNA polymerase subunits required for RNA-directed DNA methylation. Nat. Genet. 7 (2005) 761-765
-
(2005)
Nat. Genet.
, vol.7
, pp. 761-765
-
-
Kanno, T.1
Huettel, B.2
Mette, M.F.3
Aufsatz, W.4
Jaligot, E.5
Daxinger, L.6
Kreil, D.P.7
Matzke, M.8
Matzke, A.J.M.9
-
7
-
-
19344374219
-
Genetic and functional diversification of small RNA pathways in plants
-
Xie Z., Johansen L.K., Gustafson A.M., Kasschau K.D., Lellis A.D., Zilberman D., Jacobsen S.E., and Carrington J.C. Genetic and functional diversification of small RNA pathways in plants. PLoS Biol. 2 (2004) e104
-
(2004)
PLoS Biol.
, vol.2
-
-
Xie, Z.1
Johansen, L.K.2
Gustafson, A.M.3
Kasschau, K.D.4
Lellis, A.D.5
Zilberman, D.6
Jacobsen, S.E.7
Carrington, J.C.8
-
8
-
-
0037474126
-
ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation
-
Zilberman D., Cao X., and Jacobsen S.E. ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation. Science 299 (2003) 716-719
-
(2003)
Science
, vol.299
, pp. 716-719
-
-
Zilberman, D.1
Cao, X.2
Jacobsen, S.E.3
-
9
-
-
14844302397
-
Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation
-
Onodera Y., Haag J.R., Ream T., Nunes P.C., Pontes O., and Pikaard C.S. Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation. Cell 120 (2005) 613-622
-
(2005)
Cell
, vol.120
, pp. 613-622
-
-
Onodera, Y.1
Haag, J.R.2
Ream, T.3
Nunes, P.C.4
Pontes, O.5
Pikaard, C.S.6
-
10
-
-
24344433177
-
Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerase IV in Arabidopsis
-
Pontier D., Yahubyan G., Vega D., Bulski A., Saez-Vasquez J., Hakimi M., Lerbs-Mache S., Colot V., and Lagrange T. Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerase IV in Arabidopsis. Genes Dev. 19 (2005) 2030-2040
-
(2005)
Genes Dev.
, vol.19
, pp. 2030-2040
-
-
Pontier, D.1
Yahubyan, G.2
Vega, D.3
Bulski, A.4
Saez-Vasquez, J.5
Hakimi, M.6
Lerbs-Mache, S.7
Colot, V.8
Lagrange, T.9
-
11
-
-
0038670503
-
Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis
-
Saze H., Mittelsten S.O., and Paszkowski J. Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis. Nat. Genet. 34 (2003) 65-69
-
(2003)
Nat. Genet.
, vol.34
, pp. 65-69
-
-
Saze, H.1
Mittelsten, S.O.2
Paszkowski, J.3
-
12
-
-
0347033302
-
Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation
-
Cao X., Aufsatz W., Zilberman D., Mette M.F., Huang M.S., Matzke M., and Jacobsen S.E. Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation. Curr. Biol. 13 (2003) 2212-2217
-
(2003)
Curr. Biol.
, vol.13
, pp. 2212-2217
-
-
Cao, X.1
Aufsatz, W.2
Zilberman, D.3
Mette, M.F.4
Huang, M.S.5
Matzke, M.6
Jacobsen, S.E.7
-
13
-
-
33745726564
-
RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in Arabidopsis
-
Chan S.W., Henderson I.R., Zhang X., Shah G., Chien J.S., and Jacobsen S.E. RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in Arabidopsis. PLoS Genet. 2 (2006) e83
-
(2006)
PLoS Genet.
, vol.2
-
-
Chan, S.W.1
Henderson, I.R.2
Zhang, X.3
Shah, G.4
Chien, J.S.5
Jacobsen, S.E.6
-
14
-
-
40149112047
-
Dynamic regulation of ARGONAUTE4 within multiple nuclear bodies in Arabidopsis thaliana
-
Li C.F., Henderson I.R., Song L., Fedoroff N., Lagrange T., and Jacobsen S.E. Dynamic regulation of ARGONAUTE4 within multiple nuclear bodies in Arabidopsis thaliana. PLoS Genet. 4 (2008) e27
-
(2008)
PLoS Genet.
, vol.4
-
-
Li, C.F.1
Henderson, I.R.2
Song, L.3
Fedoroff, N.4
Lagrange, T.5
Jacobsen, S.E.6
-
15
-
-
49449094591
-
Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array
-
Matsui A., Ishida J., Morosawa T., Mochizuki Y., Kaminuma E., et al. Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling array. Plant Cell Physiol. 49 (2008) 1135-1149
-
(2008)
Plant Cell Physiol.
, vol.49
, pp. 1135-1149
-
-
Matsui, A.1
Ishida, J.2
Morosawa, T.3
Mochizuki, Y.4
Kaminuma, E.5
-
16
-
-
27144456611
-
Tiling array-driven elucidation of transcriptional structures based on maximum-likelihood and Markov models
-
Toyoda T., and Shinozaki K. Tiling array-driven elucidation of transcriptional structures based on maximum-likelihood and Markov models. Plant J. 43 (2005) 611-621
-
(2005)
Plant J.
, vol.43
, pp. 611-621
-
-
Toyoda, T.1
Shinozaki, K.2
-
17
-
-
33845688601
-
A diverse and evolutionarily fluid set of microRNAs in Arabidopsis
-
Rajagopalan R., Vaucheret H., Trejo J., and Bartel D.P. A diverse and evolutionarily fluid set of microRNAs in Arabidopsis. Genes Dev. 20 (2006) 3407-3425
-
(2006)
Genes Dev.
, vol.20
, pp. 3407-3425
-
-
Rajagopalan, R.1
Vaucheret, H.2
Trejo, J.3
Bartel, D.P.4
-
18
-
-
33750435234
-
Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation
-
Qi Y., He X., Wang X., Kohany O., Jurka J., and Hannon G.J. Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation. Nature 443 (2006) 1008-1012
-
(2006)
Nature
, vol.443
, pp. 1008-1012
-
-
Qi, Y.1
He, X.2
Wang, X.3
Kohany, O.4
Jurka, J.5
Hannon, G.J.6
-
19
-
-
42549096814
-
PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis
-
Mosher R.A., Schwach F., Studholme D., and Baulcombe D.C. PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis. Proc. Natl. Acad. Sci. USA 105 (2008) 3145-3150
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 3145-3150
-
-
Mosher, R.A.1
Schwach, F.2
Studholme, D.3
Baulcombe, D.C.4
|