Molecular identification of adult and juvenile linyphiid and theridiid spiders in alpine glacier foreland communities

PLoS ONE

Volumn 9, Issue 7, 2014, Pages

  Raso, Lorna ^a,b   Sint, Daniela ^a   Rief, Alexander ^a   Kaufmann, Rüdiger ^a   Traugott, Michael ^a  

^a UNIVERSITY OF INNSBRUCK   (Austria)

^b Meteoexplorationcom   (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGYNETA NIGRIPES; ARTICLE; AUSTRIA; CONTROLLED STUDY; DIPLOCEPHALUS HELLERI; ENTELECARA MEDIA; ERIGONE ATRA; ERIGONE TIROLENSIS; FEMALE; GLACIER; JANETSCHEKIA MONODON; JUVENILE; LINYPHIIDAE; MALE; MECYNARGUS PAETULUS; MOLECULAR BIOLOGY; MORPHOLOGICAL TRAIT; MUGHIPHANTES VARIABILIS; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; NUCLEOTIDE SEQUENCE; ROBERTUS ARUNDINETI; SPECIES HABITAT; SPECIES IDENTIFICATION; SPIDER; SUMMER; THERIDIIDAE; WALCKENAERA VIGILAX; ANIMAL; DNA SEQUENCE; GENETICS; ICE COVER; MOLECULAR TYPING;

ARTHROPOD PROTEIN; CYTOCHROME C OXIDASE;

ANIMALS; ARTHROPOD PROTEINS; AUSTRIA; ELECTRON TRANSPORT COMPLEX IV; ICE COVER; MOLECULAR TYPING; MULTIPLEX POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SPIDERS;

EID: 84904604972     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0101755     Document Type: Article

References (49)

1. Roberts M (2001) Collins Field Guide - Spiders of Britain and Northern Europe. London: Collins.
2. Arnedo M, Hormiga G, Scharff N (2009) Higher-level phylogenetics of linyphiid spiders (Araneae, Linyphiidae) based on morphological and molecular evidence. Cladistics 25: 231-262.
3. Hagvar S (2010) A review of Fennoscandian arthropods living on and in snow. European Journal of Entomology 107: 281-298.
4. Hodkinson ID, Coulson SJ, Harrison J (2001) What a wonderful web they weave: spiders, nutrient capture and early ecosystem development in the high Arctic - some counter-intuitive ideas on cummunity assembly. Oikos 95: 349-352. (Pubitemid 33145786)
5. Nentwig W, Blick T, Gloor D, Hänggi A, Kropf C aranea - Spiders of Europe. www.araneae.unibe.ch.
6. Knoflach B, Thaler K (1998) Kugelspinnen und verwandte Familien von Österreich: Ökofaunistische Übersicht (Araneae: Theridiidae, Anapidae, Mysmenidae, Nesticidae). Stapfia: 667-712.
7. Koponen S (2005) Early succession of a boreal spider community after forest fire. Journal of Arachnology 33: 230-235.
8. Reiskind J (1965) The taxonomic problem of sexual dimorphism n spiders and a synonymy in Myrmecotypus (Araneae, Clubionidae). Psyche: 279-281.
9. Davey JS, Vaughan IP, Andrew King R, Bell JR, Bohan DA, et al. (2013) Intraguild predation in winter wheat: prey choice by a common epigeal carabid consuming spiders. Journal of Applied Ecology 50: 271-279.
10. Benefer CM, van Herk WG, Ellis JS, Blackshaw RP, Vernon RS, et al. (2013) The molecular identification and genetic diversity of economically important wireworm species (Coleoptera: Elateridae) in Canada. Journal of Pest Science 86: 19-27.
11. Hebert PDN, Cywinska A, Ball SL, DeWaard JR (2003) Biological identifications through DNA barcodes. Proceedings of the Royal Society B-Biological Sciences 270: 313-321. (Pubitemid 36228536)
12. Valentini A, Pompanon F, Taberlet P (2009) DNA barcoding for ecologists. Trends in Ecology & Evolution 24: 110-117.
13. Hosseini R, Keller MA, Schmidt O, Framenau VW (2007) Molecular identification of wolf spiders (Araneae: Lycosidae) by multiplex polymerase chain reaction. Biological Control 40: 128-135. (Pubitemid 44895521)
14. Staudacher K, Pitterl P, Furlan L, Cate PC, Traugott M (2011) PCR-based species identification of Agriotes larvae. Bulletin of Entomological Research 101: 201-210.
15. Hosseini R, Hajizadeh J (2011) Molecular identification of three of the most important mealybug species (Hemiptera: Sternorrhyncha: Coccoidea: Pseudococcidae) on ornamental plants in Guilan province, Iran. Zootaxa: 46-54.
16. Greenstone MH, Weber DC, Coudron TC, Payton ME (2011) Unnecessary roughness? Testing the hypothesis that predators destined for molecular gut-content analysis must be hand-collected to avoid cross-contamination. Molecular Ecology Resources 11: 286-293.
17. Caballero S, Cardenosa D, Soler G, Hyde J (2012) Application of multiplex PCR approaches for shark molecular identification: feasibility and applications for fisheries management and conservation in the Eastern Tropical Pacific. Molecular Ecology Resources 12: 233-237.
18. Barrett RDH, Hebert PDN (2005) Identifying spiders through DNA barcodes. Canadian Journal of Zoology 83: 481-491. (Pubitemid 41026503)
19. Roberts M (1987) The spiders of Great Britain and Ireland, Volume 2: Linyphiidae and check list. Colchester, England: Harley Books.
20. Wiehle H (1960) Spinnentiere oder Arachnoidea (Araneae). 28. Familie Linyphiidae-Baldachinspinnen. i-viii, 1-337 p.
21. Wiehle H (1960) Spinnentiere oder Arachnoidea (Araneae). XI. Micryphantidae-Zwergspinnen. i-xi, 1-620 p.
22. Juen A, Traugott M (2005) Detecting predation and scavenging by DNA gut-content analysis: a case study using a soil insect predator-prey system. Oecologia 142: 344-352. (Pubitemid 40171963)
23. Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Molecular Marine Biology and Biotechnology 3: 294-299.
24. Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95-98.
25. Song H, Buhay JE, Whiting MF, Crandall KA (2008) Many species in one: DNA barcoding overestimates the number of species when nuclear mitochondrial pseudogenes are coamplified. Proceedings of the National Academy of Sciences of the United States of America 105: 13486-13491.
26. Sint D, Raso L, Traugott M (2012) Advances in multiplex PCR: balancing primer efficiencies and improving detection success. Methods in Ecology and Evolution 3: 898-905.
27. Collins RA, Boykin LM, Cruickshank RH, Armstrong KF (2012) Barcoding's next top model: an evaluation of nucleotide substitution models for specimen identification. Methods in Ecology and Evolution 3: 457-465.
28. Saitou N, Nei M (1987) The neighbor-joining method - A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4: 406-425.
29. Jombart T (2008) adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics 24: 1403-1405.
30. Schliep KP (2011) phangorn: phylogenetic analysis in R. Bioinformatics 27: 592-593.
31. ter Braak C, Šmilauer P (2012) Canoco reference manual and user's guide: software for ordination (version 5.0). Ithaca, NY: Microcomputer Power.
32. McCune B, MJ M (2001) PC-ORD. Multivariate Analysis of Ecological Data. Version 6 ed. Gleneden Beach, Oregon: MjM Software Design.
33. Culverhouse PF, Williams R, Reguera B, Herry V, Gonzalez-Gil S (2003) Do experts make mistakes? A comparison of human and machine identification of dinoflagellates. Marine Ecology Progress Series 247: 17-25. (Pubitemid 36229855)
34. Ko HL, Wang YT, Chiu TS, Lee MA, Leu MY, et al. (2013) Evaluating the accuracy of morphological identification of larval fishes by applying DNA barcoding. PLoS ONE 8.
35. Thaler K (1999) Beiträge zur Spinnenfauna von Nordtirol-6. Linyphiidae 2: Erigoninae (sensu Wiehle) (Arachnida: Araneae). Veröffentlichungen des Museum Ferdinandeum (Innsbruck) 79: 215-264.
36. Rowley SM, Raven RJ, McGraw EA (2004) Wolbachia pipientis in Australian spiders. Current Microbiology 49: 208-214. (Pubitemid 39142094)
37. Duron O, Hurst GDD, Hornett EA, Josling JA, EngelstÄDter JAN (2008) High incidence of the maternally inherited bacterium Cardinium in spiders. Molecular Ecology 17: 1427-1437. (Pubitemid 351347647)
38. Robinson EA, Blagoev GA, Hebert PDN, Adamowicz SJ (2009) Prospects for using DNA barcoding to identify spiders in species-rich genera. Zookeys: 27-46.
39. Smith MA, Bertrand C, Crosby K, Eveleigh ES, Fernandez-Triana J, et al. (2012) Wolbachia and DNA Barcoding Insects: Patterns, Potential, and Problems. PLoS ONE 7.
40. Goodacre SL, Martin OY, Bonte D, Hutchings L, Woolley C, et al. (2009) Microbial modification of host long-distance dispersal capacity. Bmc Biology 7.
41. Goodacre SL, Martin OY, Thomas CFG, Hewitt GM (2006) Wolbachia and other endosymbiont infections in spiders. Molecular Ecology 15: 517-527.
42. Martin OY, Goodacre SL (2009) Widespread infections by the bacterial endosymbiont Cardinium in arachnids. Journal of Arachnology 37: 106-108.
43. Nentwig W (1985) Parasitic fungi as a mortality factor of spiders. Journal of Arachnology 13: 272-274.
44. Greenstone MH, Ignoffo CM, Samson RA (1987) Susceptibility of spider species to the fungus Nomuraea atypicola. Journal of Arachnology 15: 266-268.
45. Haupt J (2002) Fungal and rickettsial infections of some East Asian trapdoor spiders; Toft S, Scharff N, editors. 45-49 p.
46. Seifert KA, Samson RA, Dewaard JR, Houbraken J, Levesque CA, et al. (2007) Prospects for fungus identification using C01 DNA barcodes, with Penicillium as a test case. Proceedings of the National Academy of Sciences of the United States of America 104: 3901-3906. (Pubitemid 47181551)
47. Vialle A, Feau N, Allaire M, Didukh M, Martin F, et al. (2009) Evaluation of mitochondrial genes as DNA barcode for Basidiomycota. Molecular Ecology Resources 9: 99-113.
48. Platnick NI (2014) The World Spider Catalog, Version 14.5. In: History AMoN, editor.
49. Muster C, Bosmans R, Thaler K (2007) The Philodromus pulchellus-group in the Mediterranean: taxonomic revision, phylogenetic analysis and biogeography (Araneae: Philodromidae). Invertebrate Systematics 21: 39-72. (Pubitemid 46393217)