Sequence and expression analyses of ethylene response factors highly expressed in latex cells from Hevea brasiliensis

PLoS ONE

Volumn 9, Issue 6, 2014, Pages

  Piyatrakul, Piyanuch ^a,b   Yang, Meng ^c   Putranto, Riza Arief ^a,d   Pirrello, Julien ^a   Dessailly, Florence ^a   Hu, Songnian ^c   Summo, Marilyne ^a   Theeravatanasuk, Kannikar ^b   Leclercq, Julie ^a   Kuswanhadi, ^e   Montoro, Pascal ^a  

^a UMR AGAP   (France)

^b Rubber Research Institute   (Thailand)

^c Chinese Academy of Sciences and China National Center for Bioinformation   (China)

^d Indonesian Biotechnology Research Institute for Estate Crops   (Indonesia)

^e Indonesian Rubber Research Institute   (Indonesia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CELL METABOLISM; CELL TYPE; CELLULAR DISTRIBUTION; CONTIG MAPPING; CONTROLLED STUDY; ERF GENE; FEMALE; GENE CONTROL; GENE EXPRESSION; GENE FUNCTION; GENE IDENTIFICATION; GENE ONTOLOGY; GENE SEQUENCE; GENE STRUCTURE; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; HBERF GENE; HEVEA BRASILIENSIS; LATEX CELL; MALE; MARKER GENE; NONHUMAN; PHYLOGENY; PLANT GENE; REAL TIME POLYMERASE CHAIN REACTION; TRANSACTIVATION; GENETICS; HEVEA; METABOLISM; MULTIGENE FAMILY; SEQUENCE ALIGNMENT;

MESSENGER RNA; TRANSCRIPTION FACTOR AP 2; VEGETABLE PROTEIN;

GENES, PLANT; HEVEA; MULTIGENE FAMILY; PHYLOGENY; PLANT PROTEINS; RNA, MESSENGER; SEQUENCE ALIGNMENT; TRANSCRIPTION FACTOR AP-2;

EID: 84903534766     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0099367     Document Type: Article

References (108)

1. Latchman DS (1997) Transcription factors: An overview. The International Journal of Biochemistry & Cell Biology 29: 1305-1312.
2. Bleecker AB, Kende H (2000) Ethylene: a gaseous signal molecule in plants. Annu Rev Cell Dev Biol 16: 1-18. (Pubitemid 32040910)
3. Johnson PR, Ecker JR (1998) The ethylene gas signal transduction pathway: a molecular perspective. Annu Rev Genet 32: 227-254. (Pubitemid 29045313)
4. Pirrello J, Jaimes-Miranda F, Sanchez-Ballesta MT, Tournier B, Khalil-Ahmad Q, et al. (2006) Sl-ERF2, a tomato ethylene response factor involved in ethylene response and seed germination. Plant Cell Physiol 47: 1195-1205. (Pubitemid 44441107)
5. Dietz K-J, Vogel M, Viehhauser A (2010) AP2/EREBP transcription factors are part of gene regulatory networks and integrate metabolic, hormonal and environmental signals in stress acclimation and retrograde signalling. Protoplasma 245: 3-14.
6. Nakano T, Suzuki K, Fujimura T, Shinshi H (2006) Genome-Wide Analysis of the ERF Gene Family in Arabidopsis and Rice. Plant Physiol 140: 411-432. (Pubitemid 43956266)
7. Sakuma Y, Liu Q, Dubouzet J, Abe H, Shinozaki K, et al. (2002) DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression. Biochemical d Biophyisical Res Comm 290: 998-1009. (Pubitemid 34687462)
8. Licausi F, Giorgi F, Zenoni S, Osti F, Pezzotti M, et al. (2010) Genomic and transcriptomic analysis of the AP2/ERF superfamily in Vitis vinifera. BMC Genomics 11: 719.
9. Zhuang J, Cai B, Peng R-H, Zhu B, Jin X-F, et al. (2008) Genome-wide analysis of the AP2/ERF gene family in Populus trichocarpa. Biochemical and Biophysical Research Communications 371: 468-474.
10. Zhang CH, Shangguan LF, Ma RJ, Sun X, Tao R, et al. (2012) Genome-wide analysis of the AP2/ERF superfamily in peach (Prunus persica). Genet Mol Res 11: 4789-4809.
11. Duan C, Argout X, Gebelin V, Summo M, Dufayard J-F, et al. (2013) Identification of the Hevea brasiliensis AP2/ERF superfamily by RNA sequencing. BMC Genomics 14: 30.
12. Chrestin H, Gidrol X, Kush A (1997) Towards a latex molecular diagnostic of yield potential and the genetic engineering of the rubber tree. Euphytica 96: 77-82. (Pubitemid 27358269)
13. Jacob JL, Prévôt JC, Kekwick RG (1989) General metabolism of Hevea brasiliensis latex (with the exception of isoprenic anabolism). In: d'Auzac J, Jacob JL, Chrestin H, editors. Physiology of rubber tree latex. Florida: CRC Press Inc. Boca Raton. pp. 101-144.
14. Duan C, Rio M, Leclercq J, Bonnot F, Oliver G, et al. (2010) Gene expression pattern in response to wounding, methyl jasmonate and ethylene in the bark of Hevea brasiliensis. Tree Physiol 30: 1349-1359.
15. Dusotoit-Coucaud A, Kongsawadworakul P, Maurousset L, Viboonjun U, Brunel N, et al. (2010) Ethylene stimulation of latex yield depends on the expression of a sucrose transporter (HbSUT1B) in rubber tree (Hevea brasiliensis). Tree Physiol 30: 1586-1598.
16. Tang C, Huang D, Yang J, Liu S, Sakr S, et al. (2010) The sucrose transporter HbSUT3 plays an active role in sucrose loading to laticifer and rubber productivity in exploited trees of Hevea brasiliensis (para rubber tree). Plant Cell Environ 33: 1708-1720.
17. Tungngoen K, Kongsawadworakul P, Viboonjun U, Katsuhara M, Brunel N, et al. (2009) Involvement of HbPIP2;1 and HbTIP1;1 aquaporins in ethylene stimulation of latex yield through regulation of water exchanges between inner liber and latex cells in Hevea brasiliensis. Plant Physiol 151: 843-856.
18. Pujade-Renaud V, Clement A, Perrot-Rechenmann C, Prevot JC, Chrestin H, et al. (1994) Ethylene-Induced Increase in Glutamine Synthetase Activity and mRNA Levels in Hevea brasiliensis Latex Cells. Plant Physiol 105: 127-132.
19. Chye ML, Tan CT, Chua NH (1992) Three genes encode 3-hydroxy-3- methylglutaryl-coenzyme A reductase in Hevea brasiliensis: hmg1 and hmg3 are differentially expressed. Plant Mol Biol 19: 473-484.
20. Gidrol X, Chrestin H, Mounoury G, D'Auzac J (1988) Early Activation by Ethylene of the Tonoplast H-Pumping ATPase in the Latex from Hevea brasiliensis. Plant Physiol 86: 899-903.
21. Zhu J, Zhang Z (2009) Ethylene stimulation of latex production in Hevea brasiliensis. Plant Signal Behav 4: 1072-1074.
22. Kuswanhadi, Leclercq J, Rio M, Tregear J, Ducamp-Collin MN, et al. (2010) Isolation of three members of the multigene family encoding ACC oxidases in Hevea brasiliensis and investigation of their responses to ethylene stimulation and wounding. Journal of Rubber Research 13: 185-205.
23. Dusotoit-Coucaud A, Porcheron B, Brunel N, Kongsawadworakul P, Franchel J, et al. (2010) Cloning and characterization of a new polyol transporter (HbPLT2) in Hevea brasiliensis. Plant Cell Physiol 51: 1878-1888.
24. Dusotoit-Coucaud A, Brunel N, Kongsawadworakul P, Viboonjun U, Lacointe A, et al. (2009) Sucrose importation into laticifers of Hevea brasiliensis, in relation to ethylene stimulation of latex production. Ann Bot 104: 635-647.
25. Piyatrakul P, Putranto RA, Martin F, Rio M, Dessailly F, et al. (2012) Some ethylene biosynthesis and AP2/ERF genes reveal a specific pattern of expression during somatic embryogenesis in Hevea brasiliensis. BMC Plant Biol 12: 244.
26. Wu HL, Yu B, Cheng QQ, Zeng RZ, Duan CF, et al. (2010) Cloning and Characterization of Jasmonic Acid-Induced AP2/EREBP Genes in Laticifer from Rubber Tree (Hevea brasiliensis Muell. Arg.). Chinese Agricultural Science Bulletin 26: 287-293.
27. Chen YY, Wang LF, Dai LJ, Yang SG, Tian WM (2012) Characterization of HbEREBP1, a wound-responsive transcription factor gene in laticifers of Hevea brasiliensis Muell. Arg Mol Biol Rep 39: 3713-3719.
28. Cai HB, Hu YS, Huang HS, Cheng H (2008) Cloning and Expression Analysis of HbCBF2 Gene in Hevea brasiliensis. Tropical Agricultural Science & Technology 31: 424-425.
29. Sambrook J, Maniatis T, Fritsch EF (1987) Molecular cloning : a laboratory manual. Cold Spring Harbor, N.Y. : Cold Spring Harbor Laboratory Press.
30. Duan C, Rio M, Leclercq J, Bonnot F, Oliver G, et al. (2010) Gene expression pattern in response to wounding, methyl jasmonate and ethylene in the bark of Hevea brasiliensis. Tree Physiology 30: 1349-1359.
31. Argout X, Fouet O, Wincker P, Gramacho K, Legavre T, et al. (2008) Towards the understanding of the cocoa transcriptome: Production and analysis of an exhaustive dataset of ESTs of Theobroma cacao L. generated from various tissues and under various conditions. BMC Genomics 9: 512.
32. Mituyama T, Yamada K, Hattori E, Okida H, Ono Y, et al. (2009) The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs. Nucleic Acids Res 37: D89-92.
33. Pertea G, Huang X, Liang F, Antonescu V, Sultana R, et al. (2003) TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics 19: 651-652. (Pubitemid 36417060)
34. Huang X, Madan A (1999) CAP3: A DNA sequence assembly program. Genome Res 9: 868-877. (Pubitemid 29488446)
35. Edgar R (2004) MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5: 113.
36. Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792-1797.
37. Talavera G, Castresana J (2007) Improvement of Phylogenies after Removing Divergent and Ambiguously Aligned Blocks from Protein Sequence Alignments. Systematic Biology 56: 564-577. (Pubitemid 47171631)
38. Guindon S, Dufayard J-F, Lefort V, Anisimova M, Hordijk W, et al. (2010) New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0. Systematic Biology 59: 307-321.
39. Gascuel O (1997) BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data. Molecular Biology and Evolution 14: 685-695.
40. Dufayard J-F, Duret L, Penel S, Gouy M, Rechenmann F, et al. (2005) Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases. Bioinformatics 21: 2596-2603. (Pubitemid 40852303)
41. Anisimova M, Gil M, Dufayard J-F, Dessimoz C, Gascuel O (2011) Survey of Branch Support Methods Demonstrates Accuracy, Power, and Robustness of Fast Likelihood-based Approximation Schemes. Systematic Biology.
42. Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Research 27: 297-300. (Pubitemid 29209466)
43. Rombauts S, Déhais P, Van Montagu M, Rouzé P (1999) PlantCARE, a plant cis-acting regulatory element database. Nucleic Acids Research 27: 295-296. (Pubitemid 29209465)
44. Bailey TL, Boden M, Buske FA, Frith M, Grant CE, et al. (2009) MEME Suite: tools for motif discovery and searching. Nucleic Acids Research 37: W202-W208.
45. Cazaux E, d'Auzac J (1995) Explanation for the lack of division of protoplasts from stems of rubber-tree (Hevea brasiliensis). Plant Cell Tissue and Organ Culture 41: 211-219.
46. Chaabouni S, Jones B, Delalande C, Wang H, Li Z, et al. (2009) Sl-IAA3, a tomato Aux/IAA at the crossroads of auxin and ethylene signalling involved in differential growth. J Exp Bot 60: 1349-1362.
47. Pirrello J, Prasad BN, Zhang W, Chen K, Mila I, et al. (2012) Functional analysis and binding affinity of tomato ethylene response factors provide insight on the molecular bases of plant differential responses to ethylene. BMC Plant Biology 12: 190.
48. Chaabouni S, Jones B, Delalande C, Wang H, Li Z, et al. (2009) Sl-IAA3, a tomato Aux/IAA at the crossroads of auxin and ethylene signalling involved in differential growth. Journal of Experimental Botany 60: 1349-1362.
49. Licausi F, Van Dongen JT, Giuntoli B, Novi G, Santaniello A, et al. (2010) HRE1 and HRE2, two hypoxia-inducible ethylene response factors, affect anaerobic responses in Arabidopsis thaliana. The Plant Journal 62: 302-315.
50. Thevenin J, Dubos C, Xu W, Le Gourrierec J, Kelemen Z, et al. (2012) A new system for fast and quantitative analysis of heterologous gene expression in plants. New Phytol 193: 504-512.
51. Han KH, Shin DH, Yang J, Kim IJ, Oh SK, et al. (2000) Genes expressed in the latex of Hevea brasiliensis. Tree Physiol 20: 503-510. (Pubitemid 30334462)
52. Ko JH, Chow KS, Han KH (2003) Transcriptome analysis reveals novel features of the molecular events occurring in the laticifers of Hevea brasiliensis (para rubber tree). Plant Mol Biol 53: 479-492.
53. Chow KS, Wan KL, Isa MN, Bahari A, Tan SH, et al. (2007) Insights into rubber biosynthesis from transcriptome analysis of Hevea brasiliensis latex. J Exp Bot 58: 2429-2440. (Pubitemid 47357554)
54. Chow KS, Mat-Isa MN, Bahari A, Ghazali AK, Alias H, et al. (2012) Metabolic routes affecting rubber biosynthesis in Hevea brasiliensis latex. J Exp Bot 63: 1863-1871.
55. Venkatachalam P, Thulaseedharan A, Raghothama K (2009) Molecular Identification and Characterization of a Gene Associated with the Onset of Tapping Panel Dryness (TPD) Syndrome in Rubber Tree (Hevea brasiliensis Muell.) by mRNA Differential Display. Molecular Biotechnology 41: 42-52.
56. Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, et al. (2012) Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing. Planta 236: 437-445.
57. Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, et al. (2012) Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets. BMC Plant Biology 12: 18.
58. Triwitayakorn K, Chatkulkawin P, Kanjanawattanawong S, Sraphet S, Yoocha T, et al. (2011) Transcriptome sequencing of Hevea brasiliensis for development of microsatellite markers and construction of a genetic linkage map. DNA Res 18: 471-482.
59. Xia Z, Xu H, Zhai J, Li D, Luo H, et al. (2011) RNA-Seq analysis and de novo transcriptome assembly of Hevea brasiliensis. Plant Mol Biol 77: 299-308.
60. Li D, Deng Z, Qin B, Liu X, Men Z (2012) De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.). BMC Genomics 13: 192.
61. Rahman AYA, Usharraj A, Misra B, Thottathil G, Jayasekaran K, et al. (2013) Draft genome sequence of the rubber tree Hevea brasiliensis. BMC Genomics 14: 75.
62. Zhang H, Jin J, Tang L, Zhao Y, Gu X, et al. (2011) PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database. Nucleic Acids Res 39: D1114-1117.
63. Khandelwal A, Elvitigala T, Ghosh B, Quatrano RS (2008) Arabidopsis transcriptome reveals control circuits regulating redox homeostasis and the role of an AP2 transcription factor. Plant Physiol 148: 2050-2058. (Pubitemid 352847480)
64. Pennycooke JC, Cheng H, Roberts SM, Yang Q, Rhee SY, et al. (2008) The low temperature-responsive, Solanum CBF1 genes maintain high identity in their upstream regions in a genomic environment undergoing gene duplications, deletions, and rearrangements. Plant Mol Biol 67: 483-497.
65. Qin F, Sakuma Y, Li J, Liu Q, Li YQ, et al. (2004) Cloning and functional analysis of a novel DREB1/CBF transcription factor involved in cold-responsive gene expression in Zea mays L. Plant Cell Physiol 45: 1042-1052. (Pubitemid 39260282)
66. Navarro M, Marque G, Ayax C, Keller G, Borges JP, et al. (2009) Complementary regulation of four Eucalyptus CBF genes under various cold conditions. J Exp Bot 60: 2713-2724.
67. Stockinger EJ, Skinner JS, Gardner KG, Francia E, Pecchioni N (2007) Expression levels of barley Cbf genes at the Frost resistance-H2 locus are dependent upon alleles at Fr-H1 and Fr-H2. Plant J 51: 308-321. (Pubitemid 47030126)
68. Azar S (2012) Les facteurs de transcription CBF dans la tolérance au froid chez l'Eucalyptus: Université de Toulouse. 106 p.
69. Alonso-Blanco C, Gomez-Mena C, Llorente F, Koornneef M, Salinas J, et al. (2005) Genetic and molecular analyses of natural variation indicate CBF2 as a candidate gene for underlying a freezing tolerance quantitative trait locus in Arabidopsis. Plant Physiol 139: 1304-1312. (Pubitemid 43786832)
70. Byrne M, Murrell JC, Owen JV, Williams ER, Moran GF (1997) Mapping of quantitative trait loci influencing frost tolerance in Eucalyptus nitens. Theoretical and Applied Genetics 95: 975-979. (Pubitemid 27493070)
71. Zhen Y, Ungerer MC (2008) Relaxed selection on the CBF/DREB1 regulatory genes and reduced freezing tolerance in the southern range of Arabidopsis thaliana. Mol Biol Evol 25: 2547-2555.
72. Gery C, Zuther E, Schulz E, Legoupi J, Chauveau A, et al. (2011) Natural variation in the freezing tolerance of Arabidopsis thaliana: effects of RNAi-induced CBF depletion and QTL localisation vary among accessions. Plant Sci 180: 12-23.
73. Rashotte AM, Mason MG, Hutchison CE, Ferreira FJ, Schaller GE, et al. (2006) A subset of Arabidopsis AP2 transcription factors mediates cytokinin responses in concert with a two-component pathway. Proceedings of the National Academy of Sciences 103: 11081-11085. (Pubitemid 44148421)
74. Etchells JP, Provost CM, Turner SR (2012) Plant vascular cell division is maintained by an interaction between PXY and ethylene signalling. PLoS Genet 8: e1002997.
75. Moffat CS, Ingle RA, Wathugala DL, Saunders NJ, Knight H, et al. (2012) ERF5 and ERF6 play redundant roles as positive regulators of JA/Et-mediated defense against Botrytis cinerea in Arabidopsis. PLoS One 7: e35995.
76. To A, Joubes J, Barthole G, Lecureuil A, Scagnelli A, et al. (2012) WRINKLED transcription factors orchestrate tissue-specific regulation of fatty acid biosynthesis in Arabidopsis. Plant Cell 24: 5007-5023.
77. Cernac A, Benning C (2004) WRINKLED1 encodes an AP2/EREB domain protein involved in the control of storage compound biosynthesis in Arabidopsis. Plant J 40: 575-585. (Pubitemid 39484176)
78. Liengprayoon S, Sriroth K, Dubreucq E, Vaysse L (2011) Glycolipid composition of Hevea brasiliensis latex. Phytochemistry 72: 1902-1913.
79. Hess N, Klode M, Anders M, Sauter M (2011) The hypoxia responsive transcription factor genes ERF71/HRE2 and ERF73/HRE1 of Arabidopsis are differentially regulated by ethylene. Physiologia Plantarum 143: 41-49.
80. Licausi F, Kosmacz M, Weits DA, Giuntoli B, Giorgi FM, et al. (2011) Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization. NATURE 479: 419-422.
81. Gibbs DJ, Lee SC, Isa NM, Gramuglia S, Fukao T, et al. (2011) Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants. Nature 479: 415-418.
82. Park H-Y, Seok H-Y, Woo D-H, Lee S-Y, Tarte VN, et al. (2011) AtERF71/HRE2 transcription factor mediates osmotic stress response as well as hypoxia response in Arabidopsis. Biochemical and Biophysical Research Communications 414: 135-141.
83. Pan L, Kawai M, Yu L-H, Kim K-M, Hirata A, et al. (2001) The Arabidopsis thaliana ethylene-responsive element binding protein (AtEBP) can function as a dominant suppressor of Bax-induced cell death of yeast. FEBS Letters 508: 375-378. (Pubitemid 33135474)
84. Li H-Y, Xiao S, Chye M-L (2008) Ethylene- and pathogen-inducible Arabidopsis acyl-CoA-binding protein 4 interacts with an ethylene-responsive element binding protein. Journal of Experimental Botany 59: 3997-4006.
85. Sasidharan R, Mustroph A (2011) Plant Oxygen Sensing Is Mediated by the N-End Rule Pathway: A Milestone in Plant Anaerobiosis. The Plant Cell Online 23: 4173-4183.
86. Licausi F, Pucciariello C, Perata P (2013) New Role for an Old Rule: N-end Rule-Mediated Degradation of Ethylene Responsive Factor Proteins Governs Low Oxygen Response in PlantsF. Journal of Integrative Plant Biology 55: 31-39.
87. Girardi CL, Rombaldi CV, Dal Cero J, Nobile PM, Laurens F, et al. (2013) Genome-wide analysis of the AP2/ERF superfamily in apple and transcriptional evidence of ERF involvement in scab pathogenesis. Scientia Horticulturae 151: 112-121.
88. Hattori Y, Nagai K, Furukawa S, Song XJ, Kawano R, et al. (2009) The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water. Nature 460: 1026-1030.
89. Perata P, Voesenek LACJ (2007) Submergence tolerance in rice requires Sub1A, an ethylene-response-factor-like gene. Trends in Plant Science 12: 43-46. (Pubitemid 46241007)
90. Schmitz AJ, Folsom JJ, Jikamaru Y, Ronald P, Walia H (2013) SUB1A-mediated submergence tolerance response in rice involves differential regulation of the brassinosteroid pathway. New Phytologist 198: 1060-1070.
91. Bailey-Serres J, Fukao T, Gibbs DJ, Holdsworth MJ, Lee SC, et al. (2012) Making sense of low oxygen sensing. Trends in Plant Science 17: 129-138.
92. Fukao T, Yeung E, Bailey-Serres J (2012) The Submergence Tolerance Gene SUB1A Delays Leaf Senescence under Prolonged Darkness through Hormonal Regulation in Rice. Plant Physiology 160: 1795-1807.
93. Fukao T, Xu K, Ronald PC, Bailey-Serres J (2006) A Variable Cluster of Ethylene Response Factor-Like Genes Regulates Metabolic and Developmental Acclimation Responses to Submergence in Rice. The Plant Cell Online 18: 2021-2034. (Pubitemid 44260194)
94. Fukao T, Xiong L (2013) Genetic mechanisms conferring adaptation to submergence and drought in rice: simple or complex? Current Opinion in Plant Biology 16: 196-204.
95. Hinz M, Wilson IW, Yang J, Buerstenbinder K, Llewellyn D, et al. (2010) Arabidopsis RAP2.2: An Ethylene Response Transcription Factor That Is Important for Hypoxia Survival. Plant Physiology 153: 757-772.
96. Papdi C, Ábrahám E, Joseph MP, Popescu C, Koncz C, et al. (2008) Functional Identification of Arabidopsis Stress Regulatory Genes Using the Controlled cDNA Overexpression System. Plant Physiology 147: 528-542. (Pubitemid 352844299)
97. Jacob JL, Prévôt JC, Kekwick (1989) General metabolism of Hevea brasiliensis latex (with the exception of isoprenic anabolism). In: d'Auzac J, Jacob J-L, Chrestin H, editors. Physiology of Rubber Tree Latex. Boca Raton, Florida: CRC press, Inc. pp. 101-144.
98. Tupý J (1989) Sucrose supply and utilization for latex production. In: d'Auzac J, Jacob J-L, Chrestin H, editors. Physiology of Rubber Tree Latex. Boca Raton, Florida: CRC Press Inc. pp. 179-218.
99. Gidrol X, Chrestin H, Tan HL, Kush A (1994) Hevein, a lectin-like protein from Hevea brasiliensis (rubber tree) is involved in the coagulation of latex. J Biol Chem 269: 9278-9283. (Pubitemid 24209255)
100. Jacob J-L, d'Auzac J (1989) The composition of latex from Hevea brasiliensis as a laticiferous cytoplasm. In: d'Auzac J, Jacob J-L, Chrestin H, editors. Physiology of Rubber Tree Latex. Boca Raton, Florida: CRC press, Inc. pp. 59-96.
101. Chrestin H (1989) Biochemical aspects of bark dryness induced by overstimulation of rubber trees with Ethrel. In: d'Auzac J, Jacob JL, Chrestin H, editors. Physiology of rubber tree latex. Florida: CRC Press Inc. Boca Raton. pp. 431-458.
102. Walley JW, Coughlan S, Hudson ME, Covington MF, Kaspi R, et al. (2007) Mechanical Stress Induces Biotic and Abiotic Stress Responses via a Novel cis-Element. PLoS Genet 3: e172.
103. Wilson K, Long D, Swinburne J, Coupland G (1996) A Dissociation Insertion Causes a Semidominant Mutation That Increases Expression of TINY, an Arabidopsis Gene Related to APETALA2. The Plant Cell Online 8: 659-671. (Pubitemid 126632548)
104. Schlereth A, Moller B, Liu W, Kientz M, Flipse J, et al. (2010) MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor. NATURE 464: 913-916.
105. Shi X, Gupta S, Rashotte AM (2012) Solanum lycopersicum cytokinin response factor (SlCRF) genes: characterization of CRF domain-containing ERF genes in tomato. Journal of Experimental Botany 63: 973-982.
106. Fujimoto SY, Ohta M, Usui A, Shinshi H, Ohme-Takagi M (2000) Arabidopsis Ethylene-Responsive Element Binding Factors Act as Transcriptional Activators or Repressors of GCC Box-Mediated Gene Expression. The Plant Cell Online 12: 393-404. (Pubitemid 30186308)
107. Krishnaswamy S, Verma S, Rahman M, Kav N (2011) Functional characterization of four APETALA2-family genes (RAP2.6, RAP2.6L, DREB19 and DREB26) in Arabidopsis. Plant Molecular Biology 75: 107-127.
108. Zhu L, Liu D, Li Y, Li N (2013) Functional Phosphoproteomic Analysis Reveals That a Serine-62-Phosphorylated Isoform of Ethylene Response Factor110 Is Involved in Arabidopsis Bolting. Plant Physiology 161: 904-917.