Pyrosequencing-based characterization of gastrointestinal bacteria of Atlantic salmon (Salmo salar L.) within a commercial mariculture system

Journal of Applied Microbiology

Volumn 117, Issue 1, 2014, Pages 18-27

  Zarkasi, K Z ^a,b   Abell, G C J ^c   Taylor, R S ^c   Neuman, C ^d   Hatje, E ^d   Tamplin, M L ^a   Katouli, M ^d   Bowman, J P ^a  

^a Australia   (Australia)

^b SCHOOL OF PHYSICS   (Malaysia)

^c CSIRO   (Australia)

^d UNIVERSITY OF THE SUNSHINE COAST   (Australia)

Author keywords

16S rRNA gene; Atlantic salmon; Intestinal bacteria; Next generation sequencing; Pyrosequencing; Season

Indexed keywords

BACTERIA; MARINE BIOLOGY; RNA;

16S RRNA GENE; ATLANTIC SALMON; BACTERIAL COMMUNITY; GASTROINTESTINAL; GASTROINTESTINAL TRACT; INTESTINAL BACTERIA; NEXT-GENERATION SEQUENCING; PYROSEQUENCING; SEASON; VIBRIONACEAE;

FISH;

LIPID; PROTEIN; RNA 16S;

BACTERIUM; COMMERCIAL SPECIES; DEVELOPMENTAL BIOLOGY; DIET; DOMINANCE; ENVIRONMENTAL FACTOR; HOST-PARASITE INTERACTION; MICROBIAL COMMUNITY; SALMONID;

ARTICLE; ATLANTIC SALMON; COMMERCIAL MARICULTURE SYSTEM; ENERGY; FECES MICROFLORA; HARVEST; INTESTINE FLORA; MARICULTURE; MICROBIAL COMMUNITY; NONHUMAN; PROTEIN CONTENT; PYROSEQUENCING; SUMMER; VIBRIONACEAE; WATER TEMPERATURE;

AUSTRALIA; TASMANIA;

16S RRNA GENE; ATLANTIC SALMON; INTESTINAL BACTERIA; NEXT-GENERATION SEQUENCING; PYROSEQUENCING; SEASON;

ANIMALS; DIET; FECES; GASTROINTESTINAL TRACT; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; LACTOBACILLACEAE; MICROBIAL CONSORTIA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SALMO SALAR; SEASONS; TASMANIA; VIBRIONACEAE;

EID: 84902436857     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/jam.12514     Document Type: Article

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