Integrating genomic, transcriptomic, and interactome data to improve peptide and protein identification in shotgun proteomics

Journal of Proteome Research

Volumn 13, Issue 6, 2014, Pages 2715-2723

  Wang, Xiaojing ^a   Zhang, Bing ^a,b,c  

^a Department of Biomedical Informatics ^*  (United States)

^b VANDERBILT INGRAM CANCER CENTER   (United States)

^c VANDERBILT UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

data integration; Next Generation Sequencing; peptide identification; personalized proteomics; protein identification; proteogenomics; RNA Seq; shotgun proteomics

Indexed keywords

ARTICLE; BIOINFORMATICS; GENOMICS; HUMAN; NEXT GENERATION SEQUENCING; NONHUMAN; PEPTIDE ANALYSIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEIN PROTEIN INTERACTION; PROTEOMICS; RNA SEQUENCE; SEQUENCE ANALYSIS; SHOTGUN PROTEOMICS; TANDEM MASS SPECTROMETRY; TRANSCRIPTOMICS; ANIMAL; GENE EXPRESSION PROFILING; GENETICS; METABOLISM; PEPTIDE MAPPING;

PROTEOME;

ANIMALS; GENE EXPRESSION PROFILING; HUMANS; PEPTIDE MAPPING; PROTEIN INTERACTION MAPPING; PROTEOME; PROTEOMICS; TANDEM MASS SPECTROMETRY;

EID: 84902106514     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr500194t     Document Type: Article

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