메뉴 건너뛰기




Volumn 10, Issue 16, 2010, Pages 3035-3039

MassSieve: Panning MS/MS peptide data for proteins

Author keywords

Bioinformatics; MS; Parsimony; Protein identification

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; LIQUID CHROMATOGRAPHY; PARSIMONY ANALYSIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; TANDEM MASS SPECTROMETRY;

EID: 77955595309     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.200900370     Document Type: Article
Times cited : (55)

References (9)
  • 1
    • 27644555055 scopus 로고    scopus 로고
    • Interpretation of shotgun proteomic data: The protein inference problem
    • Nesvizhskii, A. I., Aebersold, R., Interpretation of shotgun proteomic data: the protein inference problem. Mol. Cell. Proteomics 2005, 4, 1419-1440.
    • (2005) Mol. Cell. Proteomics , vol.4 , pp. 1419-1440
    • Nesvizhskii, A.I.1    Aebersold, R.2
  • 2
    • 0042338362 scopus 로고    scopus 로고
    • A statistical model for identifying proteins by tandem mass spectrometry
    • Nesvizhskii, A. I., Keller, A., Kolker, E., Aebersold, R., A statistical model for identifying proteins by tandem mass spectrometry. Anal. Chem. 2003, 75, 4646-4658.
    • (2003) Anal. Chem. , vol.75 , pp. 4646-4658
    • Nesvizhskii, A.I.1    Keller, A.2    Kolker, E.3    Aebersold, R.4
  • 3
    • 7044241344 scopus 로고    scopus 로고
    • DBParser: Web-based software for shotgun proteomic data analyses
    • Yang, X., Dondeti, V., Dezube, R., Maynard, D. M. et al., DBParser: web-based software for shotgun proteomic data analyses. J. Proteome Res. 2004, 3, 1002-1008.
    • (2004) J. Proteome Res. , vol.3 , pp. 1002-1008
    • Yang, X.1    Dondeti, V.2    Dezube, R.3    Maynard, D.M.4
  • 4
    • 34948874252 scopus 로고    scopus 로고
    • Proteomic parsimony through bipartite graph analysis improves accuracy and transparency
    • Zhang, B., Chambers, M. C., Tabb, D. L., Proteomic parsimony through bipartite graph analysis improves accuracy and transparency. J. Proteome Res. 2007, 6, 3549-3557.
    • (2007) J. Proteome Res. , vol.6 , pp. 3549-3557
    • Zhang, B.1    Chambers, M.C.2    Tabb, D.L.3
  • 5
    • 51749088608 scopus 로고    scopus 로고
    • BioJava: An open-source framework for bioinformatics
    • Holland, R. C. G., Down, T., Pocock, M., Prliæ, A. et al., BioJava: an open-source framework for bioinformatics. Bioinformatics 2008, 24, 2096-2097.
    • (2008) Bioinformatics , vol.24 , pp. 2096-2097
    • Holland, R.C.G.1    Down, T.2    Pocock, M.3    Prliæ, A.4
  • 6
    • 33847104994 scopus 로고    scopus 로고
    • MascotDatfile: An open-source library to fully parse and analyze Mascot MS/MS search results
    • Helsens, K., Martens, L., Gevaert, K., Vandekerckhove, J., MascotDatfile: an open-source library to fully parse and analyze Mascot MS/MS search results. Proteomics 2007, 7, 364-366.
    • (2007) Proteomics , vol.7 , pp. 364-366
    • Helsens, K.1    Martens, L.2    Gevaert, K.3    Vandekerckhove, J.4
  • 7
    • 0029345191 scopus 로고
    • ANTLR: A predicated-LL(k) parser generator
    • Parr, T. J., Quong, R. W., ANTLR: a predicated-LL(k) parser generator. Softw. Pract. Exp. 1995, 25, 789-810.
    • (1995) Softw. Pract. Exp. , vol.25 , pp. 789-810
    • Parr, T.J.1    Quong, R.W.2
  • 8
    • 0036393898 scopus 로고    scopus 로고
    • DTASelect and contrast: Tools for assembling and comparing protein identifications from shotgun proteomics
    • Tabb, D. L., McDonald, W. H., Yates, J. R., DTASelect and contrast: tools for assembling and comparing protein identifications from shotgun proteomics. J. Proteome Res. 2002. 1, 21-26.
    • (2002) J. Proteome Res. , vol.1 , pp. 21-26
    • Tabb, D.L.1    McDonald, W.H.2    Yates, J.R.3
  • 9
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • Keller, A., Nesvizhskii, A. I., Kolker, E., Aebersold, R., Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal. Chem. 2002. 74, 5383-5392.
    • (2002) Anal. Chem. , vol.74 , pp. 5383-5392
    • Keller, A.1    Nesvizhskii, A.I.2    Kolker, E.3    Aebersold, R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.