A bioinformatics workflow for variant peptide detection in shotgun proteomics

Molecular and Cellular Proteomics

Volumn 10, Issue 5, 2011, Pages

  Li, Jing ^a,c   Su, Zengliu ^b   Ma, Ze Qiang ^a   Slebos, Robbert J C ^a   Halvey, Patrick ^a   Tabb, David L ^a   Liebler, Daniel C ^a   Pao, William ^b   Zhang, Bing ^a  

^a VANDERBILT UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b VANDERBILT INGRAM CANCER CENTER   (United States)

^c SHANGHAI JIAO TONG UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE; MUTANT PROTEIN; PROTEOME; TUMOR PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; CANCER CELL CULTURE; CELL STRAIN HCT116; CELL STRAIN RKO; CELL STRAIN SW480; COLORECTAL TUMOR; DATA ANALYSIS; DATA BASE; GENE MUTATION; GENE SEQUENCE; GENOMICS; HUMAN; HUMAN CELL; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN VARIANT; PROTEOMICS; SINGLE NUCLEOTIDE POLYMORPHISM; WORKFLOW; ALGORITHM; BIOLOGY; CARCINOMA; COLON TUMOR; GENETICS; METABOLISM; METHODOLOGY; MUTATION; NUCLEOTIDE SEQUENCE; ONCOGENE RAS; PROTEIN DATABASE; TUMOR CELL LINE;

ALGORITHMS; AMINO ACID SEQUENCE; BASE SEQUENCE; CARCINOMA; CELL LINE, TUMOR; COLORECTAL NEOPLASMS; COMPUTATIONAL BIOLOGY; DATABASES, PROTEIN; GENES, RAS; HUMANS; MUTANT PROTEINS; MUTATION; NEOPLASM PROTEINS; PROTEOME; PROTEOMICS; SIGMOID NEOPLASMS; WORKFLOW;

EID: 79955765660     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.M110.006536     Document Type: Article

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