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Volumn 8, Issue 11, 2013, Pages

A p53 drug response signature identifies prognostic genes in high-risk neuroblastoma

Author keywords

[No Author keywords available]

Indexed keywords

LENTIVIRUS VECTOR; NUTLIN 3; PROTEIN P53; SHORT HAIRPIN RNA;

EID: 84896714838     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0079843     Document Type: Article
Times cited : (40)

References (59)
  • 1
    • 77953523121 scopus 로고    scopus 로고
    • Recent advances in neuroblastoma
    • Maris JM (2010) Recent advances in neuroblastoma. N Engl J Med 362: 2202-2211.
    • (2010) N Engl J Med , vol.362 , pp. 2202-2211
    • Maris, J.M.1
  • 3
    • 58249093955 scopus 로고    scopus 로고
    • The International Neuroblastoma Risk Group (INRG) classification system: An INRG Task Force report
    • Cohn SL, Pearson AD, London WB, Monclair T, Ambros PF, et al. (2009) The International Neuroblastoma Risk Group (INRG) classification system: an INRG Task Force report. J Clin Oncol 27: 289-297.
    • (2009) J Clin Oncol , vol.27 , pp. 289-297
    • Cohn, S.L.1    Pearson, A.D.2    London, W.B.3    Monclair, T.4    Ambros, P.F.5
  • 4
    • 54049149961 scopus 로고    scopus 로고
    • Somatic and germline activating mutations of the ALK kinase receptor in neuroblastoma
    • Janoueix-Lerosey I, Lequin D, Brugieres L, Ribeiro A, de Pontual L, et al. (2008) Somatic and germline activating mutations of the ALK kinase receptor in neuroblastoma. Nature 455: 967-970.
    • (2008) Nature , vol.455 , pp. 967-970
    • Janoueix-Lerosey, I.1    Lequin, D.2    Brugieres, L.3    Ribeiro, A.4    De Pontual, L.5
  • 5
    • 84859216598 scopus 로고    scopus 로고
    • Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes
    • Molenaar JJ, Koster J, Zwijnenburg DA, van Sluis P, Valentijn LJ, et al. (2012) Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes. Nature 483: 589-593.
    • (2012) Nature , vol.483 , pp. 589-593
    • Molenaar, J.J.1    Koster, J.2    Zwijnenburg, D.A.3    Van Sluis, P.4    Valentijn, L.J.5
  • 6
    • 54049118823 scopus 로고    scopus 로고
    • Oncogenic mutations of ALK kinase in neuroblastoma
    • Chen Y, Takita J, Choi YL, Kato M, Ohira M, et al. (2008) Oncogenic mutations of ALK kinase in neuroblastoma. Nature 455: 971-974.
    • (2008) Nature , vol.455 , pp. 971-974
    • Chen, Y.1    Takita, J.2    Choi, Y.L.3    Kato, M.4    Ohira, M.5
  • 7
    • 33644552409 scopus 로고    scopus 로고
    • Increased frequency of aberrations in the p53/MDM2/p14(ARF) pathway in neuroblastoma cell lines established at relapse
    • Carr J, Bell E, Pearson AD, Kees UR, Beris H, et al. (2006) Increased frequency of aberrations in the p53/MDM2/p14(ARF) pathway in neuroblastoma cell lines established at relapse. Cancer Res 66: 2138-2145.
    • (2006) Cancer Res , vol.66 , pp. 2138-2145
    • Carr, J.1    Bell, E.2    Pearson, A.D.3    Kees, U.R.4    Beris, H.5
  • 8
    • 76749166680 scopus 로고    scopus 로고
    • High Frequency of p53/MDM2/p14ARF Pathway Abnormalities in Relapsed Neuroblastoma
    • Carr-Wilkinson J, O'Toole K, Wood KM, Challen CC, Baker AG, et al. (2010) High Frequency of p53/MDM2/p14ARF Pathway Abnormalities in Relapsed Neuroblastoma. Clin Cancer Res 16: 1108-1118.
    • (2010) Clin Cancer Res , vol.16 , pp. 1108-1118
    • Carr-Wilkinson, J.1    O'Toole, K.2    Wood, K.M.3    Challen, C.C.4    Baker, A.G.5
  • 9
    • 67650457657 scopus 로고    scopus 로고
    • Mdm2 deficiency suppresses MYCN-Driven neuroblastoma tumorigenesis in vivo
    • Chen Z, Lin Y, Barbieri E, Burlingame S, Hicks J, et al. (2009) Mdm2 deficiency suppresses MYCN-Driven neuroblastoma tumorigenesis in vivo. Neoplasia 11: 753-762.
    • (2009) Neoplasia , vol.11 , pp. 753-762
    • Chen, Z.1    Lin, Y.2    Barbieri, E.3    Burlingame, S.4    Hicks, J.5
  • 12
    • 70449727603 scopus 로고    scopus 로고
    • Antitumor activity of the selective MDM2 antagonist nutlin-3 against chemoresistant neuroblastoma with wild-type p53
    • Van Maerken T, Ferdinande L, Taildeman J, Lambertz I, Yigit N, et al. (2009) Antitumor activity of the selective MDM2 antagonist nutlin-3 against chemoresistant neuroblastoma with wild-type p53. J Natl Cancer Inst 101: 1562-1574.
    • (2009) J Natl Cancer Inst , vol.101 , pp. 1562-1574
    • Van Maerken, T.1    Ferdinande, L.2    Taildeman, J.3    Lambertz, I.4    Yigit, N.5
  • 15
    • 19044394312 scopus 로고    scopus 로고
    • Overview of ribonucleotide reductase inhibitors: An appealing target in anti-tumour therapy
    • DOI 10.2174/0929867054020981
    • Cerqueira NM, Pereira S, Fernandes PA, Ramos MJ (2005) Overview of ribonucleotide reductase inhibitors: an appealing target in anti-tumour therapy. Curr Med Chem 12: 1283-1294. (Pubitemid 40711424)
    • (2005) Current Medicinal Chemistry , vol.12 , Issue.11 , pp. 1283-1294
    • Cerqueira, N.M.F.S.A.1    Pereira, S.2    Fernandes, P.A.3    Ramos, M.J.4
  • 19
    • 77649159750 scopus 로고    scopus 로고
    • Accurate outcome prediction in neuroblastoma across independent data sets using a multigene signature
    • De Preter K, Vermeulen J, Brors B, Delattre O, Eggert A, et al. (2010) Accurate outcome prediction in neuroblastoma across independent data sets using a multigene signature. Clin Cancer Res 16: 1532-1541.
    • (2010) Clin Cancer Res , vol.16 , pp. 1532-1541
    • De Preter, K.1    Vermeulen, J.2    Brors, B.3    Delattre, O.4    Eggert, A.5
  • 20
    • 33745700217 scopus 로고    scopus 로고
    • Integrative genomics identifies distinct molecular classes of neuroblastoma and shows that multiple genes are targeted by regional alterations in DNA copy number
    • Wang Q, Diskin S, Rappaport E, Attiyeh E, Mosse Y, et al. (2006) Integrative genomics identifies distinct molecular classes of neuroblastoma and shows that multiple genes are targeted by regional alterations in DNA copy number. Cancer Res 66: 6050-6062.
    • (2006) Cancer Res , vol.66 , pp. 6050-6062
    • Wang, Q.1    Diskin, S.2    Rappaport, E.3    Attiyeh, E.4    Mosse, Y.5
  • 23
    • 52949154642 scopus 로고    scopus 로고
    • High Myc pathway activity and low stage of neuronal differentiation associate with poor outcome in neuroblastoma
    • Fredlund E, Ringner M, Maris JM, Pahlman S (2008) High Myc pathway activity and low stage of neuronal differentiation associate with poor outcome in neuroblastoma. Proc Natl Acad Sci U S A 105: 14094-14099.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 14094-14099
    • Fredlund, E.1    Ringner, M.2    Maris, J.M.3    Pahlman, S.4
  • 24
    • 22544475586 scopus 로고    scopus 로고
    • GEMS: A system for automated cancer diagnosis and biomarker discovery from microarray gene expression data
    • DOI 10.1016/j.ijmedinf.2005.05.002, PII S1386505605000523, MedInfo 2004
    • Statnikov A, Tsamardinos I, Dosbayev Y, Aliferis CF (2005) GEMS: a system for automated cancer diagnosis and biomarker discovery from microarray gene expression data. Int J Med Inform 74: 491-503. (Pubitemid 41021913)
    • (2005) International Journal of Medical Informatics , vol.74 , Issue.7-8 , pp. 491-503
    • Statnikov, A.1    Tsamardinos, I.2    Dosbayev, Y.3    Aliferis, C.F.4
  • 26
    • 45449087921 scopus 로고    scopus 로고
    • qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
    • Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J (2007) qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol 8: R19.
    • (2007) Genome Biol , vol.8
    • Hellemans, J.1    Mortier, G.2    De Paepe, A.3    Speleman, F.4    Vandesompele, J.5
  • 27
    • 65549107425 scopus 로고    scopus 로고
    • RDML: Structured language and reporting guidelines for real-time quantitative PCR data
    • Lefever S, Hellemans J, Pattyn F, Przybylski DR, Taylor C, et al. (2009) RDML: structured language and reporting guidelines for real-time quantitative PCR data. Nucleic Acids Res 37: 2065-2069.
    • (2009) Nucleic Acids Res , vol.37 , pp. 2065-2069
    • Lefever, S.1    Hellemans, J.2    Pattyn, F.3    Przybylski, D.R.4    Taylor, C.5
  • 28
    • 2142815107 scopus 로고    scopus 로고
    • Regeneration of Peroxiredoxins by p53-Regulated Sestrins, Homologs of Bacterial AhpD
    • DOI 10.1126/science.1095569
    • Budanov AV, Sablina AA, Feinstein E, Koonin EV, Chumakov PM (2004) Regeneration of peroxiredoxins by p53-regulated sestrins, homologs of bacterial AhpD. Science 304: 596-600. (Pubitemid 38541920)
    • (2004) Science , vol.304 , Issue.5670 , pp. 596-600
    • Budanov, A.V.1    Sablina, A.A.2    Feinstein, E.3    Koonin, E.V.4    Chumakov, P.M.5
  • 30
    • 2642574174 scopus 로고    scopus 로고
    • p300 relieves p53-evoked transcriptional repression of hypoxia-inducible factor-1 (HIF-1)
    • DOI 10.1042/BJ20031299
    • Schmid T, Zhou J, Kohl R, Brune B (2004) p300 relieves p53-evoked transcriptional repression of hypoxia-inducible factor-1 (HIF-1). Biochem J 380: 289-295. (Pubitemid 38725754)
    • (2004) Biochemical Journal , vol.380 , Issue.1 , pp. 289-295
    • Schmid, T.1    Zhou, J.2    Kohl, R.3    Brune, B.4
  • 31
    • 80051730985 scopus 로고    scopus 로고
    • Crosstalk between c-Jun and TAp73alpha/beta contributes to the apoptosis-survival balance
    • Koeppel M, van Heeringen SJ, Kramer D, Smeenk L, Janssen-Megens E, et al. (2011) Crosstalk between c-Jun and TAp73alpha/beta contributes to the apoptosis-survival balance. Nucleic Acids Res 39: 6069-6085.
    • (2011) Nucleic Acids Res , vol.39 , pp. 6069-6085
    • Koeppel, M.1    Van Heeringen, S.J.2    Kramer, D.3    Smeenk, L.4    Janssen-Megens, E.5
  • 32
    • 84055190692 scopus 로고    scopus 로고
    • Distinct p53 genomic binding patterns in normal and cancer-derived human cells
    • Botcheva K, McCorkle SR, McCombie WR, Dunn JJ, Anderson CW (2011) Distinct p53 genomic binding patterns in normal and cancer-derived human cells. Cell Cycle 10: 4237-4249.
    • (2011) Cell Cycle , vol.10 , pp. 4237-4249
    • Botcheva, K.1    McCorkle, S.R.2    McCombie, W.R.3    Dunn, J.J.4    Anderson, C.W.5
  • 34
    • 78650316134 scopus 로고    scopus 로고
    • p53 Research: The past thirty years and the next thirty years
    • Lane D, Levine A (2010) p53 Research: the past thirty years and the next thirty years. Cold Spring Harb Perspect Biol 2: a000893.
    • (2010) Cold Spring Harb Perspect Biol , vol.2
    • Lane, D.1    Levine, A.2
  • 35
    • 0036359548 scopus 로고    scopus 로고
    • Hypoxia - A key regulatory factor in tumour growth
    • Harris AL (2002) Hypoxia - a key regulatory factor in tumour growth. Nat Rev Cancer 2: 38-47.
    • (2002) Nat Rev Cancer , vol.2 , pp. 38-47
    • Harris, A.L.1
  • 37
    • 78650403118 scopus 로고    scopus 로고
    • Combinatorial regulation of neuroblastoma tumor progression by N-Myc and hypoxia inducible factor HIF-1alpha
    • Qing G, Skuli N, Mayes PA, Pawel B, Martinez D, et al. (2010) Combinatorial regulation of neuroblastoma tumor progression by N-Myc and hypoxia inducible factor HIF-1alpha. Cancer Res 70: 10351-10361.
    • (2010) Cancer Res , vol.70 , pp. 10351-10361
    • Qing, G.1    Skuli, N.2    Mayes, P.A.3    Pawel, B.4    Martinez, D.5
  • 38
    • 0037374051 scopus 로고    scopus 로고
    • Wild-type p53 regulates human ribonucleotide reductase by protein-protein interaction with p53R2 as well as hRRM2 subunits
    • Xue L, Zhou B, Liu X, Qiu W, Jin Z, et al. (2003) Wild-type p53 regulates human ribonucleotide reductase by protein-protein interaction with p53R2 as well as hRRM2 subunits. Cancer Res 63: 980-986. (Pubitemid 36278428)
    • (2003) Cancer Research , vol.63 , Issue.5 , pp. 980-986
    • Xue, L.1    Zhou, B.2    Liu, X.3    Qiu, W.4    Jin, Z.5    Yen, Y.6
  • 39
    • 84872412062 scopus 로고    scopus 로고
    • Differential processing of let-7a precursors influences RRM2 expression and chemosensitivity in pancreatic cancer: Role of LIN-28 and SET oncoprotein
    • Bhutia YD, Hung SW, Krentz M, Patel D, Lovin D, et al. (2013) Differential processing of let-7a precursors influences RRM2 expression and chemosensitivity in pancreatic cancer: role of LIN-28 and SET oncoprotein. PLoS One 8: e53436.
    • (2013) PLoS One , vol.8
    • Bhutia, Y.D.1    Hung, S.W.2    Krentz, M.3    Patel, D.4    Lovin, D.5
  • 40
    • 77951132901 scopus 로고    scopus 로고
    • Evidence of RNAi in humans from systemically administered siRNA via targeted nanoparticles
    • Davis ME, Zuckerman JE, Choi CH, Seligson D, Tolcher A, et al. (2010) Evidence of RNAi in humans from systemically administered siRNA via targeted nanoparticles. Nature 464: 1067-1070.
    • (2010) Nature , vol.464 , pp. 1067-1070
    • Davis, M.E.1    Zuckerman, J.E.2    Choi, C.H.3    Seligson, D.4    Tolcher, A.5
  • 41
    • 33745823841 scopus 로고    scopus 로고
    • Ribonucleotide reductase inhibitors and future drug design
    • DOI 10.2174/156800906777723949
    • Shao J, Zhou B, Chu B, Yen Y (2006) Ribonucleotide reductase inhibitors and future drug design. Curr Cancer Drug Targets 6: 409-431. (Pubitemid 44033390)
    • (2006) Current Cancer Drug Targets , vol.6 , Issue.5 , pp. 409-431
    • Shao, J.1    Zhou, B.2    Chu, B.3    Yen, Y.4
  • 42
    • 84879876675 scopus 로고    scopus 로고
    • RRM2 Regulates Bcl-2 in Head and Neck and Lung Cancers: A Potential Target for Cancer Therapy
    • Rahman MA, Amin AR, Wang D, Koenig L, Nannapaneni S, et al. (2013) RRM2 Regulates Bcl-2 in Head and Neck and Lung Cancers: A Potential Target for Cancer Therapy. Clin Cancer Res 19: 3416-3428.
    • (2013) Clin Cancer Res , vol.19 , pp. 3416-3428
    • Rahman, M.A.1    Amin, A.R.2    Wang, D.3    Koenig, L.4    Nannapaneni, S.5
  • 45
    • 77950822746 scopus 로고    scopus 로고
    • Regulation of minichromosome maintenance gene family by microRNA-1296 and genistein in prostate cancer
    • Majid S, Dar AA, Saini S, Chen Y, Shahryari V, et al. (2010) Regulation of minichromosome maintenance gene family by microRNA-1296 and genistein in prostate cancer. Cancer Res 70: 2809-2818.
    • (2010) Cancer Res , vol.70 , pp. 2809-2818
    • Majid, S.1    Dar, A.A.2    Saini, S.3    Chen, Y.4    Shahryari, V.5
  • 47
    • 80455150507 scopus 로고    scopus 로고
    • Copy number defects of G1-cell cycle genes in neuroblastoma are frequent and correlate with high expression of E2F target genes and a poor prognosis
    • Molenaar JJ, Koster J, Ebus ME, van Sluis P, Westerhout EM, et al. (2012) Copy number defects of G1-cell cycle genes in neuroblastoma are frequent and correlate with high expression of E2F target genes and a poor prognosis. Genes Chromosomes Cancer 51: 10-19.
    • (2012) Genes Chromosomes Cancer , vol.51 , pp. 10-19
    • Molenaar, J.J.1    Koster, J.2    Ebus, M.E.3    Van Sluis, P.4    Westerhout, E.M.5
  • 48
    • 0037405867 scopus 로고    scopus 로고
    • The methyl-CpG binding protein MBD1 interacts with the p150 subunit of chromatin assembly factor 1
    • DOI 10.1128/MCB.23.9.3226-3236.2003
    • Reese BE, Bachman KE, Baylin SB, Rountree MR (2003) The methyl-CpG binding protein MBD1 interacts with the p150 subunit of chromatin assembly factor 1. Mol Cell Biol 23: 3226-3236. (Pubitemid 36459235)
    • (2003) Molecular and Cellular Biology , vol.23 , Issue.9 , pp. 3226-3236
    • Reese, B.E.1    Bachman, K.E.2    Baylin, S.B.3    Rountree, M.R.4
  • 49
    • 33751357219 scopus 로고    scopus 로고
    • CAF-1 is essential for heterochromatin organization in pluripotent embryonic cells
    • Houlard M, Berlivet S, Probst AV, Quivy JP, Hery P, et al. (2006) CAF-1 is essential for heterochromatin organization in pluripotent embryonic cells. PLoS Genet 2: e181.
    • (2006) PLoS Genet , vol.2
    • Houlard, M.1    Berlivet, S.2    Probst, A.V.3    Quivy, J.P.4    Hery, P.5
  • 50
    • 73649090756 scopus 로고    scopus 로고
    • Identification of a functional network of human epigenetic silencing factors
    • Poleshko A, Einarson MB, Shalginskikh N, Zhang R, Adams PD, et al. (2010) Identification of a functional network of human epigenetic silencing factors. J Biol Chem 285: 422-433.
    • (2010) J Biol Chem , vol.285 , pp. 422-433
    • Poleshko, A.1    Einarson, M.B.2    Shalginskikh, N.3    Zhang, R.4    Adams, P.D.5
  • 51
    • 33744906046 scopus 로고    scopus 로고
    • Genomic models of metastatic cancer: Functional analysis of death-from-cancer signature genes reveals aneuploid, anoikis-resistant, metastasis-enabling phenotype with altered cell cycle control and activated Polycomb Group (PcG) protein chromatin silencing pathway
    • Glinsky GV (2006) Genomic models of metastatic cancer: functional analysis of death-from-cancer signature genes reveals aneuploid, anoikis-resistant, metastasis-enabling phenotype with altered cell cycle control and activated Polycomb Group (PcG) protein chromatin silencing pathway. Cell Cycle 5: 1208-1216.
    • (2006) Cell Cycle , vol.5 , pp. 1208-1216
    • Glinsky, G.V.1
  • 54
    • 79958731053 scopus 로고    scopus 로고
    • Functional analysis of the p53 pathway in neuroblastoma cells using the small-molecule MDM2 antagonist nutlin-3
    • Van Maerken T, Rihani A, Dreidax D, De Clercq S, Yigit N, et al. (2011) Functional analysis of the p53 pathway in neuroblastoma cells using the small-molecule MDM2 antagonist nutlin-3. Mol Cancer Ther 10: 983-993.
    • (2011) Mol Cancer Ther , vol.10 , pp. 983-993
    • Van Maerken, T.1    Rihani, A.2    Dreidax, D.3    De Clercq, S.4    Yigit, N.5
  • 55
    • 72949107687 scopus 로고    scopus 로고
    • Targeted molecular therapy for neuroblastoma: The ARF/MDM2/p53 axis
    • Kim E, Shohet J (2009) Targeted molecular therapy for neuroblastoma: the ARF/MDM2/p53 axis. J Natl Cancer Inst 101: 1527-1529.
    • (2009) J Natl Cancer Inst , vol.101 , pp. 1527-1529
    • Kim, E.1    Shohet, J.2
  • 56
    • 77957764089 scopus 로고    scopus 로고
    • miR-380-5p represses p53 to control cellular survival and is associated with poor outcome in MYCN-amplified neuroblastoma
    • Swarbrick A, Woods SL, Shaw A, Balakrishnan A, Phua Y, et al. (2010) miR-380-5p represses p53 to control cellular survival and is associated with poor outcome in MYCN-amplified neuroblastoma. Nat Med 16: 1134-1140.
    • (2010) Nat Med , vol.16 , pp. 1134-1140
    • Swarbrick, A.1    Woods, S.L.2    Shaw, A.3    Balakrishnan, A.4    Phua, Y.5
  • 58
    • 84873710768 scopus 로고    scopus 로고
    • Initial testing of the MDM2 inhibitor RG7112 by the Pediatric Preclinical Testing Program
    • Carol H, Reynolds CP, Kang MH, Keir ST, Maris JM, et al. (2013) Initial testing of the MDM2 inhibitor RG7112 by the Pediatric Preclinical Testing Program. Pediatr Blood Cancer 60: 633-641.
    • (2013) Pediatr Blood Cancer , vol.60 , pp. 633-641
    • Carol, H.1    Reynolds, C.P.2    Kang, M.H.3    Keir, S.T.4    Maris, J.M.5
  • 59
    • 84880896065 scopus 로고    scopus 로고
    • Discovery of RG7388, a Potent and Selective p53-MDM2 Inhibitor in Clinical Development
    • Ding Q, Zhang Z, Liu JJ, Jiang N, Zhang J, et al. (2013) Discovery of RG7388, a Potent and Selective p53-MDM2 Inhibitor in Clinical Development. J Med Chem.
    • (2013) J Med Chem
    • Ding, Q.1    Zhang, Z.2    Liu, J.J.3    Jiang, N.4    Zhang, J.5


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