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Volumn 64, Issue 19, 2004, Pages 6883-6891

Prediction of clinical outcome using gene expression profiling and artificial neural networks for patients with neuroblastoma

Author keywords

[No Author keywords available]

Indexed keywords

CARBOPLATIN; CISPLATIN; CYCLOPHOSPHAMIDE; DOXORUBICIN; ETOPOSIDE; HERMES ANTIGEN; MELPHALAN; VINCRISTINE;

EID: 4944248113     PISSN: 00085472     EISSN: None     Source Type: Journal    
DOI: 10.1158/0008-5472.CAN-04-0695     Document Type: Article
Times cited : (182)

References (42)
  • 2
    • 0041475779 scopus 로고    scopus 로고
    • Neuroblastoma: Biology and molecular and chromosomal pathology
    • Schwab M, Westermann F, Hero B, Berthold F. Neuroblastoma: biology and molecular and chromosomal pathology. Lancet Oncol 2003;4:472-80.
    • (2003) Lancet Oncol , vol.4 , pp. 472-480
    • Schwab, M.1    Westermann, F.2    Hero, B.3    Berthold, F.4
  • 3
    • 0037190798 scopus 로고    scopus 로고
    • Genetic parameters of neuroblastomas
    • Westermann F, Schwab M. Genetic parameters of neuroblastomas. Cancer Lett 2002;184:127-47.
    • (2002) Cancer Lett , vol.184 , pp. 127-147
    • Westermann, F.1    Schwab, M.2
  • 4
    • 0037366067 scopus 로고    scopus 로고
    • Neuroblastoma: Biological insights into a clinical enigma
    • Brodeur GM. Neuroblastoma: biological insights into a clinical enigma. Nat Rev Cancer 2003;3:203-16.
    • (2003) Nat Rev Cancer , vol.3 , pp. 203-216
    • Brodeur, G.M.1
  • 5
    • 19044380776 scopus 로고    scopus 로고
    • Loss of a FYN-regulated differentiation and growth arrest pathway in advanced stage neuroblastoma
    • Berwanger B, Hartmann O, Bergmann E, et al. Loss of a FYN-regulated differentiation and growth arrest pathway in advanced stage neuroblastoma. Cancer Cell 2002;2:377-86.
    • (2002) Cancer Cell , vol.2 , pp. 377-386
    • Berwanger, B.1    Hartmann, O.2    Bergmann, E.3
  • 6
    • 0000077942 scopus 로고    scopus 로고
    • Prognosis of low-risk and high-risk neuroblastoma
    • GM Brodeur, T Sawada, Y Tsuchida, PA Voute, editors. Amsterdam, The Netherlands: Elsevier Science
    • Pearson AD, Philip T. Prognosis of low-risk and high-risk neuroblastoma. In: GM Brodeur, T Sawada, Y Tsuchida, PA Voute, editors. Neuroblastoma, 1st ed. Amsterdam, The Netherlands: Elsevier Science; 2000. p. 555.
    • (2000) Neuroblastoma, 1st Ed. , pp. 555
    • Pearson, A.D.1    Philip, T.2
  • 7
    • 0034954414 scopus 로고    scopus 로고
    • Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks
    • Khan J, Wei JS, Ringner M, et al. Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks. Nat Med 2001;7:673-9.
    • (2001) Nat Med , vol.7 , pp. 673-679
    • Khan, J.1    Wei, J.S.2    Ringner, M.3
  • 8
    • 0347201147 scopus 로고    scopus 로고
    • Multiclass cancer diagnosis using tumor gene expression signatures
    • Ramaswamy S, Tamayo P, Rifkin R, et al. Multiclass cancer diagnosis using tumor gene expression signatures. Proc Natl Acad Sci USA 2001;98:15149-54.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 15149-15154
    • Ramaswamy, S.1    Tamayo, P.2    Rifkin, R.3
  • 9
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • van 't Veer LJ, Dai H, van de Vijver MJ, He YD, et al. Gene expression profiling predicts clinical outcome of breast cancer. Nature (Lond) 2002;415:530-6.
    • (2002) Nature (Lond) , vol.415 , pp. 530-536
    • Van't Veer, L.J.1    Dai, H.2    Van De Vijver, M.J.3    He, Y.D.4
  • 10
    • 0037165140 scopus 로고    scopus 로고
    • Prediction of central nervous system embryonal tumour outcome based on gene expression
    • Pomeroy SL, Tamayo P, Gaasenbeek M, et al. Prediction of central nervous system embryonal tumour outcome based on gene expression. Nature (Lond) 2002;415:436-42.
    • (2002) Nature (Lond) , vol.415 , pp. 436-442
    • Pomeroy, S.L.1    Tamayo, P.2    Gaasenbeek, M.3
  • 11
    • 18544365698 scopus 로고    scopus 로고
    • Gene-expression profiles predict survival of patients with lung adenocarcinoma
    • Beer DG, Kardia SL, Huang CC, et al. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nat Med 2002;8:816-24.
    • (2002) Nat Med , vol.8 , pp. 816-824
    • Beer, D.G.1    Kardia, S.L.2    Huang, C.C.3
  • 12
    • 18544375333 scopus 로고    scopus 로고
    • MLL translocations specify a distinct gene expression profile that distinguishes a unique leukemia
    • Armstrong SA, Staunton JE, Silverman LB, et al. MLL translocations specify a distinct gene expression profile that distinguishes a unique leukemia. Nat Genet 2002;30:41-7.
    • (2002) Nat Genet , vol.30 , pp. 41-47
    • Armstrong, S.A.1    Staunton, J.E.2    Silverman, L.B.3
  • 13
    • 4944235862 scopus 로고    scopus 로고
    • Purification of total RNA from mammalian cells and tissues
    • D Bowtell, J Sambrook, editors. Cold Spring Harbor. New York: Cold Spring Harbor Laboratory Press
    • Wei JS, Khan J. Purification of total RNA from mammalian cells and tissues. In: D Bowtell, J Sambrook, editors. DNA microarrays: a molecular cloning manual. Cold Spring Harbor. New York: Cold Spring Harbor Laboratory Press; 2002. p. 110-9.
    • (2002) DNA Microarrays: A Molecular Cloning Manual , pp. 110-119
    • Wei, J.S.1    Khan, J.2
  • 14
    • 0036484923 scopus 로고    scopus 로고
    • Core biopsies can be used to distinguish differences in expression profiling by cDNA microarrays
    • Sotiriou C, Khanna C, Jazaeri AA, Petersen D, Liu ET. Core biopsies can be used to distinguish differences in expression profiling by cDNA microarrays. J Mol Diagn 2002;4:30-6.
    • (2002) J Mol Diagn , vol.4 , pp. 30-36
    • Sotiriou, C.1    Khanna, C.2    Jazaeri, A.A.3    Petersen, D.4    Liu, E.T.5
  • 15
    • 0033818954 scopus 로고    scopus 로고
    • A concise guide to cDNA microarray analysis
    • Hegde P, Qi R, Abernathy K, et al. A concise guide to cDNA microarray analysis. Biotechniques 2000;29:548-50, 552-4, 556 passim.
    • (2000) Biotechniques , vol.29 , pp. 548-550
    • Hegde, P.1    Qi, R.2    Abernathy, K.3
  • 16
    • 0031246430 scopus 로고    scopus 로고
    • Ratio-based decisions and the quantitative analysis of cDNA microarray images
    • Chen Y, Dougherty ER, Bittner ML. Ratio-based decisions and the quantitative analysis of cDNA microarray images. Biomedical Optics 1997;2:364-74.
    • (1997) Biomedical Optics , vol.2 , pp. 364-374
    • Chen, Y.1    Dougherty, E.R.2    Bittner, M.L.3
  • 18
    • 33845382806 scopus 로고
    • Non-parametric estimation from incomplete observations
    • Kaplan E, Meier P. Non-parametric estimation from incomplete observations. J Am Stat Assoc 1958;53:457-81.
    • (1958) J Am Stat Assoc , vol.53 , pp. 457-481
    • Kaplan, E.1    Meier, P.2
  • 19
    • 0013886333 scopus 로고
    • Evaluation of survival data and two new rank order statistics arising in its consideration
    • Mantel M. Evaluation of survival data and two new rank order statistics arising in its consideration. Cancer Chem Rep 1966;50:163-70.
    • (1966) Cancer Chem Rep , vol.50 , pp. 163-170
    • Mantel, M.1
  • 20
    • 0000336139 scopus 로고
    • Regression models and life tables
    • Cox D. Regression models and life tables. J Royal Stat Soc (B) 1972;34:187-202.
    • (1972) J Royal Stat Soc (B) , vol.34 , pp. 187-202
    • Cox, D.1
  • 22
    • 0028318390 scopus 로고
    • Statistical aspects of prognostic factor studies in oncology
    • Simon R, Altman DG. Statistical aspects of prognostic factor studies in oncology. Br J Cancer 1994;69:979-85.
    • (1994) Br J Cancer , vol.69 , pp. 979-985
    • Simon, R.1    Altman, D.G.2
  • 23
    • 0021261878 scopus 로고
    • Amplification of N-myc in untreated human neuroblastomas correlates with advanced disease stage
    • Brodeur GM, Seeger RC, Schwab M, Varmus HE, Bishop JM. Amplification of N-myc in untreated human neuroblastomas correlates with advanced disease stage. Science 1984;224:1121-4.
    • (1984) Science , vol.224 , pp. 1121-1124
    • Brodeur, G.M.1    Seeger, R.C.2    Schwab, M.3    Varmus, H.E.4    Bishop, J.M.5
  • 24
    • 0030030601 scopus 로고    scopus 로고
    • Clinical relevance of CD44 cell-surface expression and N-myc gene amplification in a multicentric analysis of 121 pediatric neuroblastomas
    • Combaret V, Gross N, Lasset C, et al. Clinical relevance of CD44 cell-surface expression and N-myc gene amplification in a multicentric analysis of 121 pediatric neuroblastomas. J Clin Oncol 1996;14:25-34.
    • (1996) J Clin Oncol , vol.14 , pp. 25-34
    • Combaret, V.1    Gross, N.2    Lasset, C.3
  • 25
    • 0037613674 scopus 로고    scopus 로고
    • CD44s expression correlated with the International Neuroblastoma Pathology Classification (Shimada system) for neuroblastic tumours
    • Munchar MJ, Sharifah NA, Jamal R, Looi LM. CD44s expression correlated with the International Neuroblastoma Pathology Classification (Shimada system) for neuroblastic tumours. Pathology 2003;35:125-9.
    • (2003) Pathology , vol.35 , pp. 125-129
    • Munchar, M.J.1    Sharifah, N.A.2    Jamal, R.3    Looi, L.M.4
  • 26
    • 0033869724 scopus 로고    scopus 로고
    • Induction chemotherapy in metastatic neuroblastoma - Does dose influence response? A critical review of published data standards, options and recommendations (SOR) project of the National Federation of French Cancer Centres (FNCLCC)
    • Pinkerton CR, Blanc Vincent MP, Bergeron C, Fervers B, Philip T. Induction chemotherapy in metastatic neuroblastoma - does dose influence response? A critical review of published data standards, options and recommendations (SOR) project of the National Federation of French Cancer Centres (FNCLCC). Eur J Cancer 2000;36:1808-15.
    • (2000) Eur J Cancer , vol.36 , pp. 1808-1815
    • Pinkerton, C.R.1    Blanc Vincent, M.P.2    Bergeron, C.3    Fervers, B.4    Philip, T.5
  • 27
    • 0013288537 scopus 로고
    • Enhanced expression of the human gene N-myc consequent to amplification of DNA may contribute to malignant progression of neuroblastoma
    • Schwab M, Ellison J, Busch M, Rosenau W, Varmus HE, Bishop JM. Enhanced expression of the human gene N-myc consequent to amplification of DNA may contribute to malignant progression of neuroblastoma. Proc Natl Acad Sci USA 1984;81:4940-4.
    • (1984) Proc Natl Acad Sci USA , vol.81 , pp. 4940-4944
    • Schwab, M.1    Ellison, J.2    Busch, M.3    Rosenau, W.4    Varmus, H.E.5    Bishop, J.M.6
  • 28
    • 0025347945 scopus 로고
    • Augmented MYCN expression advances the malignant phenotype of human neuroblastoma cells: Evidence for induction of autocrine growth factor activity
    • Schweigerer L, Breit S, Wenzel A, Tsunamoto K, Ludwig R, Schwab M. Augmented MYCN expression advances the malignant phenotype of human neuroblastoma cells: evidence for induction of autocrine growth factor activity. Cancer Res 1990;50:4411-6.
    • (1990) Cancer Res , vol.50 , pp. 4411-4416
    • Schweigerer, L.1    Breit, S.2    Wenzel, A.3    Tsunamoto, K.4    Ludwig, R.5    Schwab, M.6
  • 30
    • 0025269237 scopus 로고
    • myc gene amplification and expression in primary human neuroblastoma
    • Slave I, Ellenbogen R, Jung WH, et al. myc gene amplification and expression in primary human neuroblastoma. Cancer Res 1990;50:1459-63.
    • (1990) Cancer Res , vol.50 , pp. 1459-1463
    • Slave, I.1    Ellenbogen, R.2    Jung, W.H.3
  • 31
    • 0031727309 scopus 로고    scopus 로고
    • Prognostic significance of MYCN oncogene expression in childhood neuroblastoma
    • Bordow SB, Norris MD, Haber PS, Marshall GM, Haber M. Prognostic significance of MYCN oncogene expression in childhood neuroblastoma. J Clin Oncol 1998;16:3286-94.
    • (1998) J Clin Oncol , vol.16 , pp. 3286-3294
    • Bordow, S.B.1    Norris, M.D.2    Haber, P.S.3    Marshall, G.M.4    Haber, M.5
  • 32
    • 0029023204 scopus 로고
    • Transient and restricted expression during mouse embryogenesis of DIII, a murine gene closely related to Drosophila Delta
    • Bettenhausen B, Hrabe de Angelis M, Simon D, Guenet JL, Gossler A. Transient and restricted expression during mouse embryogenesis of DIII, a murine gene closely related to Drosophila Delta. Development 1995;121:2407-18.
    • (1995) Development , vol.121 , pp. 2407-2418
    • Bettenhausen, B.1    Hrabe De Angelis, M.2    Simon, D.3    Guenet, J.L.4    Gossler, A.5
  • 34
    • 0033646936 scopus 로고    scopus 로고
    • SAGE analysis of neuroblastoma reveals a high expression of the human homologue of the Drosophila Delta gene
    • van Limpt V, Chan A, Caron H, et al. SAGE analysis of neuroblastoma reveals a high expression of the human homologue of the Drosophila Delta gene. Med Pediatr Oncol 2000;35:554-8.
    • (2000) Med Pediatr Oncol , vol.35 , pp. 554-558
    • Van Limpt, V.1    Chan, A.2    Caron, H.3
  • 35
    • 0033617522 scopus 로고    scopus 로고
    • Notch signaling: Cell fate control and signal integration in development
    • Wash DC
    • Artavanis-Tsakonas S, Rand MD, Lake RJ. Notch signaling: cell fate control and signal integration in development. Science (Wash DC) 1999;284:770-6.
    • (1999) Science , vol.284 , pp. 770-776
    • Artavanis-Tsakonas, S.1    Rand, M.D.2    Lake, R.J.3
  • 36
    • 0028853459 scopus 로고
    • Arc, a growth factor and activity-regulated gene, encodes a novel cytoskeleton-associated protein that is enriched in neuronal dendrites
    • Lyford GL, Yamagata K, Kaufmann WE, et al. Arc, a growth factor and activity-regulated gene, encodes a novel cytoskeleton-associated protein that is enriched in neuronal dendrites. Neuron 1995;14:433-45.
    • (1995) Neuron , vol.14 , pp. 433-445
    • Lyford, G.L.1    Yamagata, K.2    Kaufmann, W.E.3
  • 37
    • 0030925596 scopus 로고    scopus 로고
    • Regulation of the neural crest cell fate by N-myc: Promotion of ventral migration and neuronal differentiation
    • Wakamatsu Y, Watanabe Y, Nakamura H, Kondoh H. Regulation of the neural crest cell fate by N-myc: promotion of ventral migration and neuronal differentiation. Development 1997;124:1953-62.
    • (1997) Development , vol.124 , pp. 1953-1962
    • Wakamatsu, Y.1    Watanabe, Y.2    Nakamura, H.3    Kondoh, H.4
  • 38
    • 0032570050 scopus 로고    scopus 로고
    • Cloning and expressions of three mammalian homologues of Drosophila slit suggest possible roles for Slit in the formation and maintenance of the nervous system
    • Itoh A, Miyabayashi T, Ohno M, Sakano S. Cloning and expressions of three mammalian homologues of Drosophila slit suggest possible roles for Slit in the formation and maintenance of the nervous system. Mol Brain Res 1998;62:175-86.
    • (1998) Mol Brain Res , vol.62 , pp. 175-186
    • Itoh, A.1    Miyabayashi, T.2    Ohno, M.3    Sakano, S.4
  • 39
    • 13044283423 scopus 로고    scopus 로고
    • NOEY2 (ARHI), an imprinted putative tumor suppressor gene in ovarian and breast carcinomas
    • Yu Y, Xu F, Peng H, et al. NOEY2 (ARHI), an imprinted putative tumor suppressor gene in ovarian and breast carcinomas. Proc Natl Acad Sci USA 1999;96:214-9.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 214-219
    • Yu, Y.1    Xu, F.2    Peng, H.3
  • 40
    • 0041672342 scopus 로고    scopus 로고
    • Aberrant methylation and silencing of ARHI, an imprinted tumor suppressor gene in which the function is lost in breast cancers
    • Yuan J, Luo RZ, Fujii S, et al. Aberrant methylation and silencing of ARHI, an imprinted tumor suppressor gene in which the function is lost in breast cancers Cancer Res 2003;63:4174-80.
    • (2003) Cancer Res , vol.63 , pp. 4174-4180
    • Yuan, J.1    Luo, R.Z.2    Fujii, S.3
  • 42
    • 0028948182 scopus 로고
    • Expression of brain-derived neurotrophic factor and p145TrkB affects survival, differentiation, and invasiveness of human neuroblastoma cells
    • Matsumoto K, Wada RK, Yamashiro JM, Kaplan DR, Thiele CJ. Expression of brain-derived neurotrophic factor and p145TrkB affects survival, differentiation, and invasiveness of human neuroblastoma cells. Cancer Res 1995;55:1798-806.
    • (1995) Cancer Res , vol.55 , pp. 1798-1806
    • Matsumoto, K.1    Wada, R.K.2    Yamashiro, J.M.3    Kaplan, D.R.4    Thiele, C.J.5


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