RNA sequencing read depth requirement for optimal transcriptome coverage in Hevea brasiliensis

BMC Research Notes

Volumn 7, Issue 1, 2014, Pages

  Chow, Keng See ^a   Ghazali, Ahmad Kamal ^b   Hoh, Chee Choong ^b   Mohd Zainuddin, Zainorlina ^a  

^a RUBBER RESEARCH INSTITUTE OF MALAYSIA   (Malaysia)

^b Codon Genomics SB ^*  (Malaysia)

Author keywords

de novo assembly; Gene transcript; Hevea brasiliensis; RNA Seq; Rubber tree; Sequencing; Transcriptome

Indexed keywords

MESSENGER RNA; PLANT RNA; TRANSCRIPTOME; VEGETABLE PROTEIN;

ARTICLE; BARK; BIOSYNTHESIS; CHEMISTRY; COMPARATIVE STUDY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE LIBRARY; GENETIC DATABASE; GENETICS; HEVEA; HIGH THROUGHPUT SEQUENCING; ISOLATION AND PURIFICATION; METABOLISM; METHODOLOGY; OPEN READING FRAME; PLANT GENE; PLANT LEAF; REPRODUCIBILITY; VALIDATION STUDY;

DATABASES, GENETIC; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENE LIBRARY; GENES, PLANT; HEVEA; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; OPEN READING FRAMES; PLANT BARK; PLANT LEAVES; PLANT PROTEINS; REPRODUCIBILITY OF RESULTS; RNA, MESSENGER; RNA, PLANT; TRANSCRIPTOME;

EID: 84893191604     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-7-69     Document Type: Article

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