-
1
-
-
34548703323
-
Development of a respiratory virus panel test for detection of twenty human respiratory viruses by use of multiplex PCR and a fluid microbead-based assay
-
Mahony, J. et al. Development of a respiratory virus panel test for detection of twenty human respiratory viruses by use of multiplex PCR and a fluid microbead-based assay. J. Clin. Microbiol. 45, 2965-2970 (2007).
-
(2007)
J. Clin. Microbiol.
, vol.45
, pp. 2965-2970
-
-
Mahony, J.1
-
2
-
-
78049474567
-
A multiplex assay for the simultaneous detection of antibodies against 15 Plasmodium falciparum and Anopheles gambiae saliva antigens
-
Ambrosino, E. et al. A multiplex assay for the simultaneous detection of antibodies against 15 Plasmodium falciparum and Anopheles gambiae saliva antigens. Malar. J. 9, 317 (2010).
-
(2010)
Malar. J.
, vol.9
, pp. 317
-
-
Ambrosino, E.1
-
3
-
-
59649129816
-
Yellow fever vaccine induces integrated multilineage and polyfunctional immune responses
-
Gaucher, D. et al. Yellow fever vaccine induces integrated multilineage and polyfunctional immune responses. J. Exp. Med. 205, 3119-3131 (2008).
-
(2008)
J. Exp. Med.
, vol.205
, pp. 3119-3131
-
-
Gaucher, D.1
-
4
-
-
3543069879
-
Seventeen-colour flow cytometry: Unravelling the immune system
-
Perfetto, S.P., Chattopadhyay, P.K. & Roederer, M. Seventeen-colour flow cytometry: unravelling the immune system. Nat. Rev. Immunol. 4, 648-655 (2004).
-
(2004)
Nat. Rev. Immunol.
, vol.4
, pp. 648-655
-
-
Perfetto, S.P.1
Chattopadhyay, P.K.2
Roederer, M.3
-
5
-
-
33746788900
-
Quantum dot semiconductor nanocrystals for immunophenotyping by polychromatic flow cytometry
-
Chattopadhyay, P.K. et al. Quantum dot semiconductor nanocrystals for immunophenotyping by polychromatic flow cytometry. Nat. Med. 12, 972-977 (2006).
-
(2006)
Nat. Med.
, vol.12
, pp. 972-977
-
-
Chattopadhyay, P.K.1
-
6
-
-
77954296648
-
Good cell, bad cell: Flow cytometry reveals T-cell subsets important in HIV disease
-
Chattopadhyay, P.K. & Roederer, M. Good cell, bad cell: flow cytometry reveals T-cell subsets important in HIV disease. Cytometry A 77, 614-622 (2010).
-
(2010)
Cytometry A
, vol.77
, pp. 614-622
-
-
Chattopadhyay, P.K.1
Roederer, M.2
-
7
-
-
55949116720
-
Phenotype and function of human T lymphocyte subsets: Consensus and issues
-
Appay, V., van Lier, R.A., Sallusto, F. & Roederer, M. Phenotype and function of human T lymphocyte subsets: consensus and issues. Cytometry A 73, 975-983 (2008).
-
(2008)
Cytometry A
, vol.73
, pp. 975-983
-
-
Appay, V.1
Van Lier, R.A.2
Sallusto, F.3
Roederer, M.4
-
8
-
-
84892756056
-
-
This review describes the traits and functions of classically defined T cell subsets, highlighting the uncertainties of profiling the immune system The authors demonstrate that different pathogens induce different profiles of T cell responses, that there is no consensus for naming and describing T cell subsets, that functional attributes can vary upon activation and that there is little data that comprehensively correlate phenotypic or functional traits with effective immunity
-
This review describes the traits and functions of classically defined T cell subsets, highlighting the uncertainties of profiling the immune system. The authors demonstrate that different pathogens induce different profiles of T cell responses, that there is no consensus for naming and describing T cell subsets, that functional attributes can vary upon activation and that there is little data that comprehensively correlate phenotypic or functional traits with effective immunity.
-
-
-
-
9
-
-
84857126819
-
Polyfunctional responses by human T cells result from sequential release of cytokines
-
Han, Q. et al. Polyfunctional responses by human T cells result from sequential release of cytokines. Proc. Natl. Acad. Sci. USA 109, 1607-1612 (2012).
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 1607-1612
-
-
Han, Q.1
-
10
-
-
84892737697
-
-
Arrays of subnanoliter compartments are used to monitor the kinetic expression of four cytokines over 17 hours from thousands of activated T cells, demonstrating that the kinetic trajectory of cytokine release can predict T cell effector phenotype
-
Arrays of subnanoliter compartments are used to monitor the kinetic expression of four cytokines over 17 hours from thousands of activated T cells, demonstrating that the kinetic trajectory of cytokine release can predict T cell effector phenotype.
-
-
-
-
11
-
-
84861344261
-
Brilliant violet fluorophores: A new class of ultrabright fluorescent compounds for immunofluorescence experiments
-
Chattopadhyay, P.K. et al. Brilliant violet fluorophores: a new class of ultrabright fluorescent compounds for immunofluorescence experiments. Cytometry A 81, 456-466 (2012).
-
(2012)
Cytometry A
, vol.81
, pp. 456-466
-
-
Chattopadhyay, P.K.1
-
12
-
-
67649610665
-
Simultaneous detection of many T-cell specificities using combinatorial tetramer staining
-
Newell, E.W., Klein, L.O., Yu, W. & Davis, M.M. Simultaneous detection of many T-cell specificities using combinatorial tetramer staining. Nat. Methods 6, 497-499 (2009).
-
(2009)
Nat. Methods
, vol.6
, pp. 497-499
-
-
Newell, E.W.1
Klein, L.O.2
Yu, W.3
Davis, M.M.4
-
13
-
-
33646029128
-
Fluorescent cell barcoding in flow cytometry allows high-throughput drug screening and signaling profiling
-
Krutzik, P.O. & Nolan, G.P. Fluorescent cell barcoding in flow cytometry allows high-throughput drug screening and signaling profiling. Nat. Methods 3, 361-368 (2006).
-
(2006)
Nat. Methods
, vol.3
, pp. 361-368
-
-
Krutzik, P.O.1
Nolan, G.P.2
-
15
-
-
84886021972
-
Advantages of full spectrum flow cytometry
-
Sanders, C.K. & Mourant, J.R. Advantages of full spectrum flow cytometry. J Biomed. Opt. 18, 037004 (2013).
-
(2013)
J Biomed. Opt.
, vol.18
, pp. 037004
-
-
Sanders, C.K.1
Mourant, J.R.2
-
16
-
-
79955750055
-
Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum
-
Bendall, S.C. et al. Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum. Science 332, 687-696 (2011).
-
(2011)
Science
, vol.332
, pp. 687-696
-
-
Bendall, S.C.1
-
17
-
-
84862676726
-
A deep profiler's guide to cytometry
-
Bendall, S.C., Nolan, G.P., Roederer, M. & Chattopadhyay, P.K. A deep profiler's guide to cytometry. Trends Immunol. 33, 323-332 (2012).
-
(2012)
Trends Immunol.
, vol.33
, pp. 323-332
-
-
Bendall, S.C.1
Nolan, G.P.2
Roederer, M.3
Chattopadhyay, P.K.4
-
18
-
-
84856278095
-
Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within a continuum of CD8+ T cell phenotypes
-
Newell, E.W., Sigal, N., Bendall, S.C., Nolan, G.P. & Davis, M.M. Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within a continuum of CD8+ T cell phenotypes. Immunity 36, 142-152 (2012).
-
(2012)
Immunity
, vol.36
, pp. 142-152
-
-
Newell, E.W.1
Sigal, N.2
Bendall, S.C.3
Nolan, G.P.4
Davis, M.M.5
-
19
-
-
84866096861
-
Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators
-
Bodenmiller, B. et al. Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators. Nat. Biotechnol. 30, 858-867 (2012).
-
(2012)
Nat. Biotechnol.
, vol.30
, pp. 858-867
-
-
Bodenmiller, B.1
-
20
-
-
80054768631
-
Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE
-
Qiu, P. et al. Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE. Nat. Biotechnol. 29, 886-891 (2011).
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 886-891
-
-
Qiu, P.1
-
21
-
-
84880280631
-
ViSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia
-
Amir el, A.D. et al. viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia. Nat. Biotechnol. 31, 545-552 (2013).
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 545-552
-
-
Amirel, A.D.1
-
22
-
-
84875487630
-
Surface area loss and increased sphericity account for the splenic entrapment of subpopulations of Plasmodium falciparum ring-infected erythrocytes
-
Safeukui, I. et al. Surface area loss and increased sphericity account for the splenic entrapment of subpopulations of Plasmodium falciparum ring-infected erythrocytes. PLoS ONE 8, e60150 (2013).
-
(2013)
PLoS ONE
, vol.8
-
-
Safeukui, I.1
-
23
-
-
79956135184
-
Quantifying nuclear p65 as a parameter for NF-κB activation: Correlation between ImageStream cytometry, microscopy, and Western blot
-
Maguire, O., Collins, C., O'Loughlin, K., Miecznikowski, J. & Minderman, H. Quantifying nuclear p65 as a parameter for NF-κB activation: correlation between ImageStream cytometry, microscopy, and Western blot. Cytometry A 79, 461-469 (2011).
-
(2011)
Cytometry A
, vol.79
, pp. 461-469
-
-
Maguire, O.1
Collins, C.2
O'Loughlin, K.3
Miecznikowski, J.4
Minderman, H.5
-
24
-
-
84863344634
-
Transcription factor Foxo1 represses T-bet-mediated effector functions and promotes memory CD8(+) T cell differentiation
-
Rao, R.R., Li, Q., Gubbels Bupp, M.R. & Shrikant, P.A. Transcription factor Foxo1 represses T-bet-mediated effector functions and promotes memory CD8(+) T cell differentiation. Immunity 36, 374-387 (2012).
-
(2012)
Immunity
, vol.36
, pp. 374-387
-
-
Rao, R.R.1
Li, Q.2
Gubbels Bupp, M.R.3
Shrikant, P.A.4
-
25
-
-
33751327802
-
Quantitative analysis of protein co-localization on B cells opsonized with rituximab and complement using the ImageStream multispectral imaging flow cytometer
-
Beum, P.V. et al. Quantitative analysis of protein co-localization on B cells opsonized with rituximab and complement using the ImageStream multispectral imaging flow cytometer. J. Immunol. Methods 317, 90-99 (2006).
-
(2006)
J. Immunol. Methods
, vol.317
, pp. 90-99
-
-
Beum, P.V.1
-
26
-
-
80054956266
-
L-plastin phosphorylation: A novel target for the immunosuppressive drug dexamethasone in primary human T cells
-
Wabnitz, G.H. et al. L-plastin phosphorylation: a novel target for the immunosuppressive drug dexamethasone in primary human T cells. Eur. J. Immunol. 41, 3157-3169 (2011).
-
(2011)
Eur. J. Immunol.
, vol.41
, pp. 3157-3169
-
-
Wabnitz, G.H.1
-
27
-
-
84884289863
-
Immunoliposome encapsulation increases cytotoxic activity and selectivity of curcumin and resveratrol against HER2 overexpressing human breast cancer cells
-
Catania, A., Barrajon-Catalan, E., Nicolosi, S., Cicirata, F. & Micol, V. Immunoliposome encapsulation increases cytotoxic activity and selectivity of curcumin and resveratrol against HER2 overexpressing human breast cancer cells. Breast Cancer Res. Treat. 141, 55-65 (2013).
-
(2013)
Breast Cancer Res. Treat.
, vol.141
, pp. 55-65
-
-
Catania, A.1
Barrajon-Catalan, E.2
Nicolosi, S.3
Cicirata, F.4
Micol, V.5
-
28
-
-
78449266142
-
Targeting of cancer cells using click-functionalized polymer capsules
-
Kamphuis, M.M. et al. Targeting of cancer cells using click-functionalized polymer capsules. J. Am. Chem. Soc. 132, 15881-15883 (2010).
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 15881-15883
-
-
Kamphuis, M.M.1
-
29
-
-
78649499977
-
Overview of single-cell analyses: Microdevices and applications
-
Lindstrom, S. & Andersson-Svahn, H. Overview of single-cell analyses: microdevices and applications. Lab Chip 10, 3363-3372 (2010).
-
(2010)
Lab Chip
, vol.10
, pp. 3363-3372
-
-
Lindstrom, S.1
Andersson-Svahn, H.2
-
30
-
-
84856468378
-
Microfluidics for single cell analysis
-
Yin, H.B. & Marshall, D. Microfluidics for single cell analysis. Curr. Opin. Biotechnol. 23, 110-119 (2012).
-
(2012)
Curr. Opin. Biotechnol.
, vol.23
, pp. 110-119
-
-
Yin, H.B.1
Marshall, D.2
-
31
-
-
84858419159
-
Analytical technologies for integrated single-cell analysis of human immune responses
-
Yalcin, A., Yamanaka, Y.J. & Love, J.C. Analytical technologies for integrated single-cell analysis of human immune responses. Methods Mol. Biol. 853, 211-235 (2012).
-
(2012)
Methods Mol. Biol.
, vol.853
, pp. 211-235
-
-
Yalcin, A.1
Yamanaka, Y.J.2
Love, J.C.3
-
32
-
-
84873578476
-
High throughput HLA genotyping using 454 sequencing and the Fluidigm Access Array System for simplified amplicon library preparation
-
Moonsamy, P.V. et al. High throughput HLA genotyping using 454 sequencing and the Fluidigm Access Array System for simplified amplicon library preparation. Tissue Antigens 81, 141-149 (2013).
-
(2013)
Tissue Antigens
, vol.81
, pp. 141-149
-
-
Moonsamy, P.V.1
-
33
-
-
79958122357
-
A clinical microchip for evaluation of single immune cells reveals high functional heterogeneity in phenotypically similar T cells
-
Ma, C. et al. A clinical microchip for evaluation of single immune cells reveals high functional heterogeneity in phenotypically similar T cells. Nat. Med. 17, 738-743 (2011).
-
(2011)
Nat. Med.
, vol.17
, pp. 738-743
-
-
Ma, C.1
-
34
-
-
51249106861
-
Concurrent detection of secreted products from human lymphocytes by microengraving: Cytokines and antigen-reactive antibodies
-
Bradshaw, E.M. et al. Concurrent detection of secreted products from human lymphocytes by microengraving: cytokines and antigen-reactive antibodies. Clin. Immunol. 129, 10-18 (2008).
-
(2008)
Clin. Immunol.
, vol.129
, pp. 10-18
-
-
Bradshaw, E.M.1
-
35
-
-
84857978200
-
Rapid, efficient functional characterization and recovery of HIV-specific human CD8(+) T cells using microengraving
-
Varadarajan, N. et al. Rapid, efficient functional characterization and recovery of HIV-specific human CD8(+) T cells using microengraving. Proc. Natl. Acad. Sci. USA 109, 3885-3890 (2012).
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 3885-3890
-
-
Varadarajan, N.1
-
36
-
-
84887608052
-
Detection and isolation of auto-reactive human antibodies from primary B cells
-
Sendra, V.G., Lie, A., Romain, G., Agarwal, S.K. & Varadarajan, N. Detection and isolation of auto-reactive human antibodies from primary B cells. Methods 64, 153-159 (2013).
-
(2013)
Methods
, vol.64
, pp. 153-159
-
-
Sendra, V.G.1
Lie, A.2
Romain, G.3
Agarwal, S.K.4
Varadarajan, N.5
-
37
-
-
84870157455
-
Functional single-cell analysis of T-cell activation by supported lipid bilayer-tethered ligands on arrays of nanowells
-
Torres, A.J., Contento, R.L., Gordo, S., Wucherpfennig, K.W. & Love, J.C. Functional single-cell analysis of T-cell activation by supported lipid bilayer-tethered ligands on arrays of nanowells. Lab Chip 13, 90-99 (2013).
-
(2013)
Lab Chip
, vol.13
, pp. 90-99
-
-
Torres, A.J.1
Contento, R.L.2
Gordo, S.3
Wucherpfennig, K.W.4
Love, J.C.5
-
38
-
-
80555148949
-
A high-throughput single-cell analysis of human CD8(+) T cell functions reveals discordance for cytokine secretion and cytolysis
-
Varadarajan, N. et al. A high-throughput single-cell analysis of human CD8(+) T cell functions reveals discordance for cytokine secretion and cytolysis. J. Clin. Invest. 121, 4322-4331 (2011).
-
(2011)
J. Clin. Invest.
, vol.121
, pp. 4322-4331
-
-
Varadarajan, N.1
-
39
-
-
84874439367
-
Single-cell analysis of the dynamics and functional outcomes of interactions between human natural killer cells and target cells
-
Yamanaka, Y.J. et al. Single-cell analysis of the dynamics and functional outcomes of interactions between human natural killer cells and target cells. Integr. Biol. 4, 1175-1184 (2012).
-
(2012)
Integr. Biol.
, vol.4
, pp. 1175-1184
-
-
Yamanaka, Y.J.1
-
40
-
-
70349617709
-
Detecting cytokine release from single T-cells
-
Zhu, H. et al. Detecting cytokine release from single T-cells. Anal. Chem. 81, 8150-8156 (2009).
-
(2009)
Anal. Chem.
, vol.81
, pp. 8150-8156
-
-
Zhu, H.1
-
41
-
-
77952635983
-
Multidimensional analysis of the frequencies and rates of cytokine secretion from single cells by quantitative microengraving
-
Han, Q., Bradshaw, E.M., Nilsson, B., Hafler, D.A. & Love, J.C. Multidimensional analysis of the frequencies and rates of cytokine secretion from single cells by quantitative microengraving. Lab Chip 10, 1391-1400 (2010).
-
(2010)
Lab Chip
, vol.10
, pp. 1391-1400
-
-
Han, Q.1
Bradshaw, E.M.2
Nilsson, B.3
Hafler, D.A.4
Love, J.C.5
-
42
-
-
69949151874
-
A rapid and efficient single-cell manipulation method for screening antigen-specific antibody-secreting cells from human peripheral blood
-
Jin, A. et al. A rapid and efficient single-cell manipulation method for screening antigen-specific antibody-secreting cells from human peripheral blood. Nat. Med. 15, 1088-1092 (2009).
-
(2009)
Nat. Med.
, vol.15
, pp. 1088-1092
-
-
Jin, A.1
-
43
-
-
84874068247
-
High-throughput secretomic analysis of single cells to assess functional cellular heterogeneity
-
Lu, Y. et al. High-throughput secretomic analysis of single cells to assess functional cellular heterogeneity. Anal. Chem. 85, 2548-2556 (2013).
-
(2013)
Anal. Chem.
, vol.85
, pp. 2548-2556
-
-
Lu, Y.1
-
44
-
-
79960024256
-
Analysis of transient migration behavior of natural killer cells imaged in situ and in vitro
-
Khorshidi, M.A. et al. Analysis of transient migration behavior of natural killer cells imaged in situ and in vitro. Integr. Biol. 3, 770-778 (2011).
-
(2011)
Integr. Biol.
, vol.3
, pp. 770-778
-
-
Khorshidi, M.A.1
-
45
-
-
84859150755
-
Single-cell level co-culture platform for intercellular communication
-
Hong, S., Pan, Q. & Lee, L.P. Single-cell level co-culture platform for intercellular communication. Integr. Biol. 4, 374-380 (2012).
-
(2012)
Integr. Biol.
, vol.4
, pp. 374-380
-
-
Hong, S.1
Pan, Q.2
Lee, L.P.3
-
46
-
-
78649726238
-
Imaging immune surveillance of individual natural killer cells confined in microwell arrays
-
Guldevall, K. et al. Imaging immune surveillance of individual natural killer cells confined in microwell arrays. PLoS ONE 5, e15453 (2010).
-
(2010)
PLoS ONE
, vol.5
-
-
Guldevall, K.1
-
47
-
-
70349684952
-
A cell chip for sequential imaging of individual non-adherent live cells reveals transients and oscillations
-
Schiffenbauer, Y.S. et al. A cell chip for sequential imaging of individual non-adherent live cells reveals transients and oscillations. Lab Chip 9, 2965-2972 (2009).
-
(2009)
Lab Chip
, vol.9
, pp. 2965-2972
-
-
Schiffenbauer, Y.S.1
-
48
-
-
80053896769
-
A silicon-glass microwell platform for high-resolution imaging and high-content screening with single cell resolution
-
Frisk, T.W., Khorshidi, M.A., Guldevall, K., Vanherberghen, B. & Onfelt, B. A silicon-glass microwell platform for high-resolution imaging and high-content screening with single cell resolution. Biomed. Microdevices 13, 683-693 (2011).
-
(2011)
Biomed. Microdevices
, vol.13
, pp. 683-693
-
-
Frisk, T.W.1
Khorshidi, M.A.2
Guldevall, K.3
Vanherberghen, B.4
Onfelt, B.5
-
49
-
-
84868561879
-
Monitoring the dynamics of primary T cell activation and differentiation using long term live cell imaging in microwell arrays
-
Zaretsky, I. et al. Monitoring the dynamics of primary T cell activation and differentiation using long term live cell imaging in microwell arrays. Lab Chip 12, 5007-5015 (2012).
-
(2012)
Lab Chip
, vol.12
, pp. 5007-5015
-
-
Zaretsky, I.1
-
50
-
-
84870891611
-
Quantitating cell-cell interaction functions with applications to glioblastoma multiforme cancer cells
-
Wang, J. et al. Quantitating cell-cell interaction functions with applications to glioblastoma multiforme cancer cells. Nano Lett. 12, 6101-6106 (2012).
-
(2012)
Nano Lett.
, vol.12
, pp. 6101-6106
-
-
Wang, J.1
-
51
-
-
77956116622
-
Massively parallel detection of gene expression in single cells using subnanolitre wells
-
Gong, Y., Ogunniyi, A.O. & Love, J.C. Massively parallel detection of gene expression in single cells using subnanolitre wells. Lab Chip 10, 2334-2337 (2010).
-
(2010)
Lab Chip
, vol.10
, pp. 2334-2337
-
-
Gong, Y.1
Ogunniyi, A.O.2
Love, J.C.3
-
52
-
-
84856004321
-
Single-cell proteomic chip for profiling intracellular signaling pathways in single tumor cells
-
Shi, Q. et al. Single-cell proteomic chip for profiling intracellular signaling pathways in single tumor cells. Proc. Natl. Acad. Sci. USA 109, 419-424 (2012).
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 419-424
-
-
Shi, Q.1
-
53
-
-
78149378861
-
Integrated process design for single-cell analytical technologies
-
Love, J.C. Integrated process design for single-cell analytical technologies. AIChE J. 56, 2496-2502 (2010).
-
(2010)
AIChE J.
, vol.56
, pp. 2496-2502
-
-
Love, J.C.1
-
54
-
-
84874447340
-
Classification of human natural killer cells based on migration behavior and cytotoxic response
-
Vanherberghen, B. et al. Classification of human natural killer cells based on migration behavior and cytotoxic response. Blood 121, 1326-1334 (2013).
-
(2013)
Blood
, vol.121
, pp. 1326-1334
-
-
Vanherberghen, B.1
-
55
-
-
70149096883
-
Droplet microfluidic technology for single-cell high-throughput screening. Proc. Natl
-
Brouzes, E. et al. Droplet microfluidic technology for single-cell high-throughput screening. Proc. Natl. Acad. Sci. USA 106, 14195-14200 (2009).
-
(2009)
Acad. Sci. USA
, vol.106
, pp. 14195-14200
-
-
Brouzes, E.1
-
56
-
-
78650611056
-
Droplet-based microfluidic platforms for single T cell secretion analysis of IL-10 cytokine
-
Konry, T., Dominguez-Villar, M., Baecher-Allan, C., Hafler, D.A. & Yarmush, M.L. Droplet-based microfluidic platforms for single T cell secretion analysis of IL-10 cytokine. Biosens. Bioelectron. 26, 2707-2710 (2011).
-
(2011)
Biosens. Bioelectron
, vol.26
, pp. 2707-2710
-
-
Konry, T.1
Dominguez-Villar, M.2
Baecher-Allan, C.3
Hafler, D.A.4
Yarmush, M.L.5
-
57
-
-
84876142711
-
Highly multiplexed quantitation of gene expression on single cells
-
Dominguez, M.H. et al. Highly multiplexed quantitation of gene expression on single cells. J. Immunol. Methods 391, 133-145 (2013).
-
(2013)
J. Immunol. Methods
, vol.391
, pp. 133-145
-
-
Dominguez, M.H.1
-
58
-
-
84878997106
-
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
-
Shalek, A.K. et al. Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells. Nature 498, 236-240 (2013).
-
(2013)
Nature
, vol.498
, pp. 236-240
-
-
Shalek, A.K.1
-
59
-
-
84892689208
-
-
RNA-seq was used to identify new subsets of dendritic cells missed by other single-cell assays, and this work provides a quantitative analysis of the limitations of RNA-seq accuracy when measuring transcripts with low expression
-
RNA-seq was used to identify new subsets of dendritic cells missed by other single-cell assays, and this work provides a quantitative analysis of the limitations of RNA-seq accuracy when measuring transcripts with low expression.
-
-
-
-
60
-
-
79959567069
-
Deterministic and stochastic allele specific gene expression in single mouse blastomeres
-
Tang, F. et al. Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS ONE 6, e21208 (2011).
-
(2011)
PLoS ONE
, vol.6
-
-
Tang, F.1
-
61
-
-
84874666550
-
Critical assessment of automated flow cytometry data analysis techniques
-
Aghaeepour, N. et al. Critical assessment of automated flow cytometry data analysis techniques. Nat. Methods 10, 228-238 (2013).
-
(2013)
Nat. Methods
, vol.10
, pp. 228-238
-
-
Aghaeepour, N.1
-
62
-
-
84859246989
-
Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays
-
Aghaeepour, N. et al. Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays. Bioinformatics 28, 1009-1016 (2012).
-
(2012)
Bioinformatics
, vol.28
, pp. 1009-1016
-
-
Aghaeepour, N.1
-
63
-
-
84869866192
-
RchyOptimyx: Cellular hierarchy optimization for flow cytometry
-
Aghaeepour, N. et al. RchyOptimyx: cellular hierarchy optimization for flow cytometry. Cytometry A 81, 1022-1030 (2012).
-
(2012)
Cytometry A
, vol.81
, pp. 1022-1030
-
-
Aghaeepour, N.1
-
64
-
-
84890485060
-
Mixture models for single-cell assays with applications to vaccine studies
-
Finak, G. et al. Mixture models for single-cell assays with applications to vaccine studies. Biostatistics 15, 87-101 (2014).
-
(2014)
Biostatistics
, vol.15
, pp. 87-101
-
-
Finak, G.1
-
65
-
-
34447544075
-
Optimizing a multicolor immunophenotyping assay
-
Mahnke, Y.D. & Roederer, M. Optimizing a multicolor immunophenotyping assay. Clin. Lab. Med. 27, 469-485 (2007).
-
(2007)
Clin. Lab. Med.
, vol.27
, pp. 469-485
-
-
Mahnke, Y.D.1
Roederer, M.2
-
66
-
-
84874321000
-
Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments
-
McDavid, A. et al. Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments. Bioinformatics 29, 461-467 (2013).
-
(2013)
Bioinformatics
, vol.29
, pp. 461-467
-
-
McDavid, A.1
|