메뉴 건너뛰기




Volumn 15, Issue 1, 2014, Pages 87-101

Mixture models for single-cell assays with applications to vaccine studies

Author keywords

Bayesian modeling; Expectation Maximization; Flow cytometry; Hierarchical modeling; Immunology; Marginal likelihood; Markov Chain Monte Carlo; MIMOSA; Single cell gene expression

Indexed keywords

BIOLOGICAL MARKER; HUMAN IMMUNODEFICIENCY VIRUS VACCINE;

EID: 84890485060     PISSN: 14654644     EISSN: 14684357     Source Type: Journal    
DOI: 10.1093/biostatistics/kxt024     Document Type: Article
Times cited : (50)

References (25)
  • 10
    • 33645086851 scopus 로고    scopus 로고
    • Bayesian robust inference for differential gene expression in microarrays with multiple samples
    • GOTTARDO, R., RAFTERY, A. E., KA YEE, Y. AND BUMGARNER, R. (2006). Bayesian robust inference for differential gene expression in microarrays with multiple samples. Biometrics 62, 10-18.
    • (2006) Biometrics , vol.62 , pp. 10-18
    • Gottardo, R.1    Raftery, A.E.2    Ka Yee, Y.3    Bumgarner, R.4
  • 11
    • 34248149301 scopus 로고    scopus 로고
    • Optimization and validation of an 8-color intracellular cytokine staining (ICS) assay to quantify antigen-specific T cells induced by vaccination
    • DOI 10.1016/j.jim.2007.03.002, PII S0022175907000890
    • HORTON, H., THOMAS, E. P., STUCKY, J. A., FRANK, I., MOODIE, Z., HUANG, Y., CHIU, Y. L., MCELRATH, M. J. AND DE ROSA, S. C. (2007). Optimization and validation of an 8-color intracellular cytokine staining (ICS) assay to quantify antigen-specific t cells induced by vaccination. Journal of Immunological Methods 323(1), 39-54. (Pubitemid 46722712)
    • (2007) Journal of Immunological Methods , vol.323 , Issue.1 , pp. 39-54
    • Horton, H.1    Thomas, E.P.2    Stucky, J.A.3    Frank, I.4    Moodie, Z.5    Huang, Y.6    Chiu, Y.-L.7    McElrath, M.J.8    De Rosa, S.C.9
  • 14
    • 33847325857 scopus 로고    scopus 로고
    • Flexible empirical Bayes models for differential gene expression
    • DOI 10.1093/bioinformatics/btl612
    • LO, K. AND GOTTARDO, R. (2007). Flexible empirical Bayes models for differential gene expression. Bioinformatics 23(3), 328-335. (Pubitemid 46323155)
    • (2007) Bioinformatics , vol.23 , Issue.3 , pp. 328-335
    • Lo, K.1    Gottardo, R.2
  • 16
    • 77950471980 scopus 로고    scopus 로고
    • The potential of CD4 T-cellmemory
    • MCKINSTRY, K. K., STRUTT, T. M. AND SWAIN, S. L. (2010). The potential of CD4 T-cellmemory. Immunology 130(1), 1-9.
    • (2010) Immunology , vol.130 , Issue.1 , pp. 1-9
    • McKinstry, K.K.1    Strutt, T.M.2    Swain, S.L.3
  • 17
  • 18
    • 33745726451 scopus 로고    scopus 로고
    • Patterns of immune response to a vaccine or virus as measured by intracellular cytokine staining in flow cytometry: Hypothesis generation and comparison of groups
    • DOI 10.1080/10543400600719426, PII H5806H1305UL2060
    • NASON, M. (2006). Patterns of immune response to a vaccine or virus as measured by intracellular cytokine staining in flow cytometry: hypothesis generation and comparison of groups. Journal of Biopharmaceutical Statistics 16(4), 483-498. (Pubitemid 43995557)
    • (2006) Journal of Biopharmaceutical Statistics , vol.16 , Issue.4 , pp. 483-498
    • Nason, M.1
  • 19
    • 4444235995 scopus 로고    scopus 로고
    • Detecting differential gene expression with a semiparametric hierarchical mixture method
    • DOI 10.1093/biostatistics/5.2.155
    • NEWTON, M. A., NOUEIRY, A., SARKAR, D. AND AHLQUIST, P. (2004). Detecting differential gene expression with a semiparametric hierarchical mixture method. Biostatistics (Oxford, England) 5(2), 155-176. (Pubitemid 41180221)
    • (2004) Biostatistics , vol.5 , Issue.2 , pp. 155-176
    • Newton, M.A.1    Noueiry, A.2    Sarkar, D.3    Ahlquist, P.4
  • 20
    • 78149417692 scopus 로고    scopus 로고
    • Safety and immunogenicity of a replication-defective adenovirus type 5 hiv vaccine in ad5-seronegative persons: A randomized clinical trial (hvtn 054)
    • THE NIAID HIV VACCINE TRIALS NETWORK
    • PEIPERL, L., MORGAN, C., MOODIE, Z., LI, H., RUSSELL, N., GRAHAM, B. S., TOMARAS, G. D., DE ROSA, S. C., MCELRATH, M. J. AND THE NIAID HIV VACCINE TRIALS NETWORK. (2010). Safety and immunogenicity of a replication-defective adenovirus type 5 hiv vaccine in ad5-seronegative persons: a randomized clinical trial (hvtn 054). PLoS ONE 5(10), e13579.
    • (2010) PLoS ONE , vol.5 , Issue.10
    • Peiperl, L.1    Morgan, C.2    Moodie, Z.3    Li, H.4    Russell, N.5    Graham, B.S.6    Tomaras, G.D.7    De Rosa, S.C.8    McElrath, M.J.9
  • 22
    • 62749175165 scopus 로고    scopus 로고
    • Conditioning in 2 × 2 tables
    • PROSCHAN, M. A. AND NASON, M. (2009). Conditioning in 2 × 2 tables. Biometrics 65(1), 316-322.
    • (2009) Biometrics , vol.65 , Issue.1 , pp. 316-322
    • Proschan, M.A.1    Nason, M.2
  • 24
    • 4544307158 scopus 로고    scopus 로고
    • + T cell IFNγ expression and proliferation responses in healthy CMV-seropositive individuals
    • DOI 10.1089/vim.2004.17.445
    • SINCLAIR, E., BLACK, D., EPLING, C. L., CARVIDI, A., JOSEFOWICZ, S. Z., BREDT, B. M. AND JACOBSON, M. A. (2004). CMV antigen-specific CD4+ and CD8+ T cell IFNgamma expression and proliferation responses in healthy CMVseropositive individuals. Viral Immunology 17(3), 445-454. (Pubitemid 39244767)
    • (2004) Viral Immunology , vol.17 , Issue.3 , pp. 445-454
    • Sinclair, E.1    Black, D.2    Epling, C.L.3    Carvidi, A.4    Josefowicz, S.Z.5    Bredt, B.M.6    Jacobson, M.A.7
  • 25
    • 10744224978 scopus 로고    scopus 로고
    • Intracellular staining for HIV-specific IFN-γ production: Statistical analyses establish reproducibility and criteria for distinguishing positive responses
    • DOI 10.1089/107999003322226023
    • TRIGONA, W. L., CLAIR, J. H., PERSAUD, N., PUNT, K., BACHINSKY, M., SADASIVAN-NAIR, U., DUBEY, S., TUSSEY, L., FU, T.-M. AND SHIVER, J. (2003). Intracellular staining for HIV-specific IFN-gamma production: statistical analyses establish reproducibility and criteria for distinguishing positive responses. Journal of Interferon & Cytokine Research: The Official Journal of the International Society for Interferon and Cytokine Research 23(7), 369-377. (Pubitemid 36876283)
    • (2003) Journal of Interferon and Cytokine Research , vol.23 , Issue.7 , pp. 369-377
    • Trigona, W.L.1    Clair, J.H.2    Persaud, N.3    Punt, K.4    Bachinsky, M.5    Sadasivan-Nair, U.6    Dubey, S.7    Tussey, L.8    Fu, T.-M.9    Shiver, J.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.