메뉴 건너뛰기




Volumn 6, Issue 1, 2014, Pages 1-13

sigmaS, a major player in the response to environmental stresses in Escherichia coli: Role, regulation and mechanisms of promoter recognition

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; SIGMA FACTOR; SIGMA FACTOR KATF PROTEIN, BACTERIA;

EID: 84892658301     PISSN: None     EISSN: 17582229     Source Type: Journal    
DOI: 10.1111/1758-2229.12112     Document Type: Article
Times cited : (103)

References (108)
  • 1
    • 84870665519 scopus 로고    scopus 로고
    • Identity and function of a large gene network underlying mutagenic repair of DNA breaks
    • Al Mamun, A.A., Lombardo, M.J., Shee, C., Lisewski, A.M., Gonzalez, C., Lin, D., etal. (2012) Identity and function of a large gene network underlying mutagenic repair of DNA breaks. Science 338: 1344-1348.
    • (2012) Science , vol.338 , pp. 1344-1348
    • Al Mamun, A.A.1    Lombardo, M.J.2    Shee, C.3    Lisewski, A.M.4    Gonzalez, C.5    Lin, D.6
  • 2
    • 84876837863 scopus 로고    scopus 로고
    • RpoS plays a central role in the SOS induction by sub-lethal aminoglycoside concentrations in Vibrio cholerae
    • Baharoglu, Z., Krin, E., and Mazel, D. (2013) RpoS plays a central role in the SOS induction by sub-lethal aminoglycoside concentrations in Vibrio cholerae. PLoS Genet 9: e1003421.
    • (2013) PLoS Genet , vol.9
    • Baharoglu, Z.1    Krin, E.2    Mazel, D.3
  • 3
    • 0035117825 scopus 로고    scopus 로고
    • The Escherichia coli histone-like protein HU regulates rpoS translation
    • Balandina, A., Claret, L., Hengge-Aronis, R., and Rouviere-Yaniv, J. (2001) The Escherichia coli histone-like protein HU regulates rpoS translation. Mol Microbiol 39: 1069-1079.
    • (2001) Mol Microbiol , vol.39 , pp. 1069-1079
    • Balandina, A.1    Claret, L.2    Hengge-Aronis, R.3    Rouviere-Yaniv, J.4
  • 4
    • 0030965301 scopus 로고    scopus 로고
    • Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters
    • Barne, K.A., Bown, J.A., Busby, S.J., and Minchin, S.D. (1997) Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters. EMBO J 16: 4034-4040.
    • (1997) EMBO J , vol.16 , pp. 4034-4040
    • Barne, K.A.1    Bown, J.A.2    Busby, S.J.3    Minchin, S.D.4
  • 5
    • 80053226878 scopus 로고    scopus 로고
    • The RpoS-mediated general stress response in Escherichia coli
    • Battesti, A., Majdalani, N., and Gottesman, S. (2011) The RpoS-mediated general stress response in Escherichia coli. Annu Rev Microbiol 65: 189-213.
    • (2011) Annu Rev Microbiol , vol.65 , pp. 189-213
    • Battesti, A.1    Majdalani, N.2    Gottesman, S.3
  • 6
    • 0035107351 scopus 로고    scopus 로고
    • What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S)
    • Becker, G., and Hengge-Aronis, R. (2001) What makes an Escherichia coli promoter sigma(S) dependent? Role of the -13/-14 nucleotide promoter positions and region 2.5 of sigma(S). Mol Microbiol 39: 1153-1165.
    • (2001) Mol Microbiol , vol.39 , pp. 1153-1165
    • Becker, G.1    Hengge-Aronis, R.2
  • 7
    • 0032989449 scopus 로고    scopus 로고
    • Regulation of RpoS proteolysis in Escherichia coli: the response regulator RssB is a recognition factor that interacts with the turnover element in RpoS
    • Becker, G., Klauck, E., and Hengge-Aronis, R. (1999) Regulation of RpoS proteolysis in Escherichia coli: the response regulator RssB is a recognition factor that interacts with the turnover element in RpoS. Proc Natl Acad Sci USA 96: 6439-6444.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 6439-6444
    • Becker, G.1    Klauck, E.2    Hengge-Aronis, R.3
  • 8
    • 0033951376 scopus 로고    scopus 로고
    • The response regulator RssB, a recognition factor for sigmaS proteolysis in Escherichia coli, can act like an anti-sigmaS factor
    • Becker, G., Klauck, E., and Hengge-Aronis, R. (2000) The response regulator RssB, a recognition factor for sigmaS proteolysis in Escherichia coli, can act like an anti-sigmaS factor. Mol Microbiol 35: 657-666.
    • (2000) Mol Microbiol , vol.35 , pp. 657-666
    • Becker, G.1    Klauck, E.2    Hengge-Aronis, R.3
  • 9
    • 33645860823 scopus 로고    scopus 로고
    • The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription
    • Bernardo, L.M., Johansson, L.U., Solera, D., Skarfstad, E., and Shingler, V. (2006) The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription. Mol Microbiol 60: 749-764.
    • (2006) Mol Microbiol , vol.60 , pp. 749-764
    • Bernardo, L.M.1    Johansson, L.U.2    Solera, D.3    Skarfstad, E.4    Shingler, V.5
  • 10
    • 0032563108 scopus 로고    scopus 로고
    • The entericidin locus of Escherichia coli and its implications for programmed bacterial cell death
    • Bishop, R.E., Leskiw, B.K., Hodges, R.S., Kay, C.M., and Weiner, J.H. (1998) The entericidin locus of Escherichia coli and its implications for programmed bacterial cell death. J Mol Biol 280: 583-596.
    • (1998) J Mol Biol , vol.280 , pp. 583-596
    • Bishop, R.E.1    Leskiw, B.K.2    Hodges, R.S.3    Kay, C.M.4    Weiner, J.H.5
  • 11
    • 84858867080 scopus 로고    scopus 로고
    • The csgD mRNA as a hub for signal integration via multiple small RNAs
    • Boehm, A., and Vogel, J. (2012) The csgD mRNA as a hub for signal integration via multiple small RNAs. Mol Microbiol 84: 1-5.
    • (2012) Mol Microbiol , vol.84 , pp. 1-5
    • Boehm, A.1    Vogel, J.2
  • 12
    • 0033975447 scopus 로고    scopus 로고
    • Involvement of differential efficiency of transcription by esigmas and esigma70 RNA polymerase holoenzymes in growth phase regulation of the Escherichia coli osmE promoter
    • Bordes, P., Repoila, F., Kolb, A., and Gutierrez, C. (2000) Involvement of differential efficiency of transcription by esigmas and esigma70 RNA polymerase holoenzymes in growth phase regulation of the Escherichia coli osmE promoter. Mol Microbiol 35: 845-853.
    • (2000) Mol Microbiol , vol.35 , pp. 845-853
    • Bordes, P.1    Repoila, F.2    Kolb, A.3    Gutierrez, C.4
  • 13
    • 0031939765 scopus 로고    scopus 로고
    • Regulation of RssB-dependent proteolysis in Escherichia coli: a role for acetyl phosphate in a response regulator-controlled process
    • Bouche, S., Klauck, E., Fischer, D., Lucassen, M., Jung, K., and Hengge-Aronis, R. (1998) Regulation of RssB-dependent proteolysis in Escherichia coli: a role for acetyl phosphate in a response regulator-controlled process. Mol Microbiol 27: 787-795.
    • (1998) Mol Microbiol , vol.27 , pp. 787-795
    • Bouche, S.1    Klauck, E.2    Fischer, D.3    Lucassen, M.4    Jung, K.5    Hengge-Aronis, R.6
  • 14
    • 34547913090 scopus 로고    scopus 로고
    • ppGpp regulation of RpoS degradation via anti-adaptor protein IraP
    • Bougdour, A., and Gottesman, S. (2007) ppGpp regulation of RpoS degradation via anti-adaptor protein IraP. Proc Natl Acad Sci USA 104: 12896-12901.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 12896-12901
    • Bougdour, A.1    Gottesman, S.2
  • 15
    • 41049111259 scopus 로고    scopus 로고
    • Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptors
    • Bougdour, A., Cunning, C., Baptiste, P.J., Elliott, T., and Gottesman, S. (2008) Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptors. Mol Microbiol 68: 298-313.
    • (2008) Mol Microbiol , vol.68 , pp. 298-313
    • Bougdour, A.1    Cunning, C.2    Baptiste, P.J.3    Elliott, T.4    Gottesman, S.5
  • 16
    • 78650459440 scopus 로고    scopus 로고
    • UV-C inactivation in Escherichia coli is affected by growth conditions preceding irradiation, in particular by the specific growth rate
    • Bucheli-Witschel, M., Bassin, C., and Egli, T. (2010) UV-C inactivation in Escherichia coli is affected by growth conditions preceding irradiation, in particular by the specific growth rate. J Appl Microbiol 109: 1733-1744.
    • (2010) J Appl Microbiol , vol.109 , pp. 1733-1744
    • Bucheli-Witschel, M.1    Bassin, C.2    Egli, T.3
  • 17
    • 0034192263 scopus 로고    scopus 로고
    • DNA sequence elements located immediately upstream of the -10 hexamer in Escherichia coli promoters: a systematic study
    • Burr, T., Mitchell, J., Kolb, A., Minchin, S., and Busby, S. (2000) DNA sequence elements located immediately upstream of the -10 hexamer in Escherichia coli promoters: a systematic study. Nucleic Acids Res 28: 1864-1870.
    • (2000) Nucleic Acids Res , vol.28 , pp. 1864-1870
    • Burr, T.1    Mitchell, J.2    Kolb, A.3    Minchin, S.4    Busby, S.5
  • 18
    • 1242286997 scopus 로고    scopus 로고
    • Interactions between the 2.4 and 4.2 regions of sigmaS, the stress-specific sigma factor of Escherichia coli, and the -10 and -35 promoter elements
    • Checroun, C., Bordes, P., Leroy, O., Kolb, A., and Gutierrez, C. (2004) Interactions between the 2.4 and 4.2 regions of sigmaS, the stress-specific sigma factor of Escherichia coli, and the -10 and -35 promoter elements. Nucleic Acids Res 32: 45-53.
    • (2004) Nucleic Acids Res , vol.32 , pp. 45-53
    • Checroun, C.1    Bordes, P.2    Leroy, O.3    Kolb, A.4    Gutierrez, C.5
  • 19
    • 0028804889 scopus 로고
    • Control of rRNA transcription in Escherichia coli
    • Condon, C., Squires, C., and Squires, C.L. (1995) Control of rRNA transcription in Escherichia coli. Microbiol Rev 59: 623-645.
    • (1995) Microbiol Rev , vol.59 , pp. 623-645
    • Condon, C.1    Squires, C.2    Squires, C.L.3
  • 20
    • 80655125448 scopus 로고    scopus 로고
    • Redefining Escherichia coli sigma(70) promoter elements: -15 motif as a complement of the -10 motif
    • Djordjevic, M. (2011) Redefining Escherichia coli sigma(70) promoter elements: -15 motif as a complement of the -10 motif. J Bacteriol 193: 6305-6314.
    • (2011) J Bacteriol , vol.193 , pp. 6305-6314
    • Djordjevic, M.1
  • 21
    • 29244480001 scopus 로고    scopus 로고
    • RNA polymerase holoenzymes can share a single transcription start site for the Pm promoter. Critical nucleotides in the -7 to -18 region are needed to select between RNA polymerase with sigma38 or sigma32
    • Dominguez-Cuevas, P., Marin, P., Ramos, J.L., and Marques, S. (2005) RNA polymerase holoenzymes can share a single transcription start site for the Pm promoter. Critical nucleotides in the -7 to -18 region are needed to select between RNA polymerase with sigma38 or sigma32. J Biol Chem 280: 41315-41323.
    • (2005) J Biol Chem , vol.280 , pp. 41315-41323
    • Dominguez-Cuevas, P.1    Marin, P.2    Ramos, J.L.3    Marques, S.4
  • 22
    • 57649220029 scopus 로고    scopus 로고
    • Control of RpoS in global gene expression of Escherichia coli in minimal media
    • Dong, T., and Schellhorn, H.E. (2009) Control of RpoS in global gene expression of Escherichia coli in minimal media. Mol Genet Genomics 281: 19-33.
    • (2009) Mol Genet Genomics , vol.281 , pp. 19-33
    • Dong, T.1    Schellhorn, H.E.2
  • 23
    • 39249084651 scopus 로고    scopus 로고
    • RpoS regulation of gene expression during exponential growth of Escherichia coli K12
    • Dong, T., Kirchhof, M.G., and Schellhorn, H.E. (2008) RpoS regulation of gene expression during exponential growth of Escherichia coli K12. Mol Genet Genomics 279: 267-277.
    • (2008) Mol Genet Genomics , vol.279 , pp. 267-277
    • Dong, T.1    Kirchhof, M.G.2    Schellhorn, H.E.3
  • 24
    • 84883624748 scopus 로고    scopus 로고
    • Expression dynamics of RpoS/Crl-dependent genes in Escherichia coli
    • Dudin, O., Lacour, S., and Geiselmann, J. (2013) Expression dynamics of RpoS/Crl-dependent genes in Escherichia coli. Res Microbiol 164: 838-847.
    • (2013) Res Microbiol , vol.164 , pp. 838-847
    • Dudin, O.1    Lacour, S.2    Geiselmann, J.3
  • 25
    • 57749104127 scopus 로고    scopus 로고
    • Binding of the unorthodox transcription activator, Crl, to the components of the transcription machinery
    • England, P., Westblade, L.F., Karimova, G., Robbe-Saule, V., Norel, F., and Kolb, A. (2008) Binding of the unorthodox transcription activator, Crl, to the components of the transcription machinery. J Biol Chem 283: 33455-33464.
    • (2008) J Biol Chem , vol.283 , pp. 33455-33464
    • England, P.1    Westblade, L.F.2    Karimova, G.3    Robbe-Saule, V.4    Norel, F.5    Kolb, A.6
  • 26
    • 0029835151 scopus 로고    scopus 로고
    • A consensus structure for sigma S-dependent promoters
    • Espinosa-Urgel, M., Chamizo, C., and Tormo, A. (1996) A consensus structure for sigma S-dependent promoters. Mol Microbiol 21: 657-659.
    • (1996) Mol Microbiol , vol.21 , pp. 657-659
    • Espinosa-Urgel, M.1    Chamizo, C.2    Tormo, A.3
  • 28
    • 33751094307 scopus 로고    scopus 로고
    • Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence
    • Gibson, D.L., White, A.P., Snyder, S.D., Martin, S., Heiss, C., Azadi, P., etal. (2006) Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence. J Bacteriol 188: 7722-7730.
    • (2006) J Bacteriol , vol.188 , pp. 7722-7730
    • Gibson, D.L.1    White, A.P.2    Snyder, S.D.3    Martin, S.4    Heiss, C.5    Azadi, P.6
  • 29
    • 0032947598 scopus 로고    scopus 로고
    • The LysR homolog LrhA promotes RpoS degradation by modulating activity of the response regulator sprE
    • Gibson, K.E., and Silhavy, T.J. (1999) The LysR homolog LrhA promotes RpoS degradation by modulating activity of the response regulator sprE. J Bacteriol 181: 563-571.
    • (1999) J Bacteriol , vol.181 , pp. 563-571
    • Gibson, K.E.1    Silhavy, T.J.2
  • 30
    • 33745466674 scopus 로고    scopus 로고
    • General pathway for turning on promoters transcribed by RNA polymerases containing alternative sigma factors
    • Gourse, R.L., Ross, W., and Rutherford, S.T. (2006) General pathway for turning on promoters transcribed by RNA polymerases containing alternative sigma factors. J Bacteriol 188: 4589-4591.
    • (2006) J Bacteriol , vol.188 , pp. 4589-4591
    • Gourse, R.L.1    Ross, W.2    Rutherford, S.T.3
  • 31
    • 36549031300 scopus 로고    scopus 로고
    • Biofilm formation-gene expression relay system in Escherichia coli: modulation of sigmaS-dependent gene expression by the CsgD regulatory protein via sigmaS protein stabilization
    • Gualdi, L., Tagliabue, L., and Landini, P. (2007) Biofilm formation-gene expression relay system in Escherichia coli: modulation of sigmaS-dependent gene expression by the CsgD regulatory protein via sigmaS protein stabilization. J Bacteriol 189: 8034-8043.
    • (2007) J Bacteriol , vol.189 , pp. 8034-8043
    • Gualdi, L.1    Tagliabue, L.2    Landini, P.3
  • 32
    • 71749093772 scopus 로고    scopus 로고
    • Proteolysis of sigmaS (RpoS) and the general stress response in Escherichia coli
    • Hengge, R. (2009) Proteolysis of sigmaS (RpoS) and the general stress response in Escherichia coli. Res Microbiol 160: 667-676.
    • (2009) Res Microbiol , vol.160 , pp. 667-676
    • Hengge, R.1
  • 33
    • 0029843811 scopus 로고    scopus 로고
    • Back to log phase: sigmaS as a global regulator in the osmotic control of gene expression in Escherichia coli
    • Hengge-Aronis, R. (1996) Back to log phase: sigmaS as a global regulator in the osmotic control of gene expression in Escherichia coli. Mol Microbiol 21: 887-893.
    • (1996) Mol Microbiol , vol.21 , pp. 887-893
    • Hengge-Aronis, R.1
  • 34
    • 0027391016 scopus 로고
    • Osmotic regulation of rpoS-dependent genes in Escherichia coli
    • Hengge-Aronis, R., Lange, R., Henneberg, N., and Fischer, D. (1993) Osmotic regulation of rpoS-dependent genes in Escherichia coli. J Bacteriol 175: 259-265.
    • (1993) J Bacteriol , vol.175 , pp. 259-265
    • Hengge-Aronis, R.1    Lange, R.2    Henneberg, N.3    Fischer, D.4
  • 35
    • 0036724358 scopus 로고    scopus 로고
    • Role of ppGpp in rpoS stationary-phase regulation in Escherichia coli
    • Hirsch, M., and Elliott, T. (2002) Role of ppGpp in rpoS stationary-phase regulation in Escherichia coli. J Bacteriol 184: 5077-5087.
    • (2002) J Bacteriol , vol.184 , pp. 5077-5087
    • Hirsch, M.1    Elliott, T.2
  • 36
    • 18144408764 scopus 로고    scopus 로고
    • Reduced hydroperoxidase (HPI and HPII) activity in the Δfur mutant contributes to increased sensitivity to UVA radiation in Escherichia coli
    • Hoerter, J.D., Arnold, A.A., Ward, C.S., Sauer, M., Johnson, S., Fleming, T., and Eisenstark, A. (2005) Reduced hydroperoxidase (HPI and HPII) activity in the Δfur mutant contributes to increased sensitivity to UVA radiation in Escherichia coli. J Photochem Photobiol B 79: 151-157.
    • (2005) J Photochem Photobiol B , vol.79 , pp. 151-157
    • Hoerter, J.D.1    Arnold, A.A.2    Ward, C.S.3    Sauer, M.4    Johnson, S.5    Fleming, T.6    Eisenstark, A.7
  • 38
    • 84863243970 scopus 로고    scopus 로고
    • Antitoxin DinJ influences the general stress response through transcript stabilizer CspE
    • Hu, Y., Benedik, M.J., and Wood, T.K. (2012) Antitoxin DinJ influences the general stress response through transcript stabilizer CspE. Environ Microbiol 14: 669-679.
    • (2012) Environ Microbiol , vol.14 , pp. 669-679
    • Hu, Y.1    Benedik, M.J.2    Wood, T.K.3
  • 39
    • 3142675034 scopus 로고    scopus 로고
    • Specific growth rate and not cell density controls the general stress response in Escherichia coli
    • Ihssen, J., and Egli, T. (2004) Specific growth rate and not cell density controls the general stress response in Escherichia coli. Microbiology 150: 1637-1648.
    • (2004) Microbiology , vol.150 , pp. 1637-1648
    • Ihssen, J.1    Egli, T.2
  • 40
    • 77955141792 scopus 로고    scopus 로고
    • Prokaryotic genome regulation: multifactor promoters, multitarget regulators and hierarchic networks
    • Ishihama, A. (2010) Prokaryotic genome regulation: multifactor promoters, multitarget regulators and hierarchic networks. FEMS Microbiol Rev 34: 628-645.
    • (2010) FEMS Microbiol Rev , vol.34 , pp. 628-645
    • Ishihama, A.1
  • 41
    • 0032980156 scopus 로고    scopus 로고
    • Transcriptional organization and in vivo role of the Escherichia coli rsd gene, encoding the regulator of RNA polymerase sigmaD
    • Jishage, M., and Ishihama, A. (1999) Transcriptional organization and in vivo role of the Escherichia coli rsd gene, encoding the regulator of RNA polymerase sigmaD. J Bacteriol 181: 3768-3776.
    • (1999) J Bacteriol , vol.181 , pp. 3768-3776
    • Jishage, M.1    Ishihama, A.2
  • 42
    • 0037093379 scopus 로고    scopus 로고
    • Regulation of sigma factor competition by the alarmone ppGpp
    • Jishage, M., Kvint, K., Shingler, V., and Nystrom, T. (2002) Regulation of sigma factor competition by the alarmone ppGpp. Genes Dev 16: 1260-1270.
    • (2002) Genes Dev , vol.16 , pp. 1260-1270
    • Jishage, M.1    Kvint, K.2    Shingler, V.3    Nystrom, T.4
  • 43
    • 0026541540 scopus 로고
    • Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR)
    • Kaasen, I., Falkenberg, P., Styrvold, O.B., and Strom, A.R. (1992) Molecular cloning and physical mapping of the otsBA genes, which encode the osmoregulatory trehalose pathway of Escherichia coli: evidence that transcription is activated by katF (AppR). J Bacteriol 174: 889-898.
    • (1992) J Bacteriol , vol.174 , pp. 889-898
    • Kaasen, I.1    Falkenberg, P.2    Styrvold, O.B.3    Strom, A.R.4
  • 44
    • 11344264898 scopus 로고    scopus 로고
    • Regulation of 6S RNA biogenesis by switching utilization of both sigma factors and endoribonucleases
    • Kim, K.S., and Lee, Y. (2004) Regulation of 6S RNA biogenesis by switching utilization of both sigma factors and endoribonucleases. Nucleic Acids Res 32: 6057-6068.
    • (2004) Nucleic Acids Res , vol.32 , pp. 6057-6068
    • Kim, K.S.1    Lee, Y.2
  • 45
    • 33646181748 scopus 로고    scopus 로고
    • Genotype-by-environment interactions influencing the emergence of rpoS mutations in Escherichia coli populations
    • King, T., Seeto, S., and Ferenci, T. (2006) Genotype-by-environment interactions influencing the emergence of rpoS mutations in Escherichia coli populations. Genetics 172: 2071-2079.
    • (2006) Genetics , vol.172 , pp. 2071-2079
    • King, T.1    Seeto, S.2    Ferenci, T.3
  • 46
    • 0027236999 scopus 로고
    • Transcriptional regulation by cAMP and its receptor protein
    • Kolb, A., Busby, S., Buc, H., Garges, S., and Adhya, S. (1993) Transcriptional regulation by cAMP and its receptor protein. Annu Rev Biochem 62: 749-795.
    • (1993) Annu Rev Biochem , vol.62 , pp. 749-795
    • Kolb, A.1    Busby, S.2    Buc, H.3    Garges, S.4    Adhya, S.5
  • 47
    • 65549095572 scopus 로고    scopus 로고
    • The stationary-phase sigma factor sigma(S) is responsible for the resistance of Escherichia coli stationary-phase cells to mazEF-mediated cell death
    • Kolodkin-Gal, I., and Engelberg-Kulka, H. (2009) The stationary-phase sigma factor sigma(S) is responsible for the resistance of Escherichia coli stationary-phase cells to mazEF-mediated cell death. J Bacteriol 191: 3177-3182.
    • (2009) J Bacteriol , vol.191 , pp. 3177-3182
    • Kolodkin-Gal, I.1    Engelberg-Kulka, H.2
  • 48
    • 6044228192 scopus 로고    scopus 로고
    • SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences
    • Lacour, S., and Landini, P. (2004a) SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences. J Bacteriol 186: 7186-7195.
    • (2004) J Bacteriol , vol.186 , pp. 7186-7195
    • Lacour, S.1    Landini, P.2
  • 49
    • 0036295539 scopus 로고    scopus 로고
    • Mechanism of specific recognition of the aidB promoter by sigma(S)-RNA polymerase
    • Lacour, S., Kolb, A., Boris Zehnder, A.J., and Landini, P. (2002) Mechanism of specific recognition of the aidB promoter by sigma(S)-RNA polymerase. Biochem Biophys Res Commun 292: 922-930.
    • (2002) Biochem Biophys Res Commun , vol.292 , pp. 922-930
    • Lacour, S.1    Kolb, A.2    Boris Zehnder, A.J.3    Landini, P.4
  • 50
    • 0141733251 scopus 로고    scopus 로고
    • Nucleotides from -16 to -12 determine specific promoter recognition by bacterial sigmaS-RNA polymerase
    • Lacour, S., Kolb, A., and Landini, P. (2003) Nucleotides from -16 to -12 determine specific promoter recognition by bacterial sigmaS-RNA polymerase. J Biol Chem 278: 37160-37168.
    • (2003) J Biol Chem , vol.278 , pp. 37160-37168
    • Lacour, S.1    Kolb, A.2    Landini, P.3
  • 51
    • 11244299330 scopus 로고    scopus 로고
    • Substitutions in region 2.4 of sigma70 allow recognition of the sigmaS-dependent aidB promoter
    • Lacour, S., Leroy, O., Kolb, A., and Landini, P. (2004b) Substitutions in region 2.4 of sigma70 allow recognition of the sigmaS-dependent aidB promoter. J Biol Chem 279: 55255-55261.
    • (2004) J Biol Chem , vol.279 , pp. 55255-55261
    • Lacour, S.1    Leroy, O.2    Kolb, A.3    Landini, P.4
  • 52
    • 67349266189 scopus 로고    scopus 로고
    • Cross-talk mechanisms between biofilm formation and response to environmental and physiological stresses in Escherichia coli
    • Landini, P. (2009) Cross-talk mechanisms between biofilm formation and response to environmental and physiological stresses in Escherichia coli. Res Microbiol 160: 259-266.
    • (2009) Res Microbiol , vol.160 , pp. 259-266
    • Landini, P.1
  • 53
    • 0028106775 scopus 로고
    • The nlpD gene is located in an operon with rpoS on the Escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formation
    • Lange, R., and Hengge-Aronis, R. (1994a) The nlpD gene is located in an operon with rpoS on the Escherichia coli chromosome and encodes a novel lipoprotein with a potential function in cell wall formation. Mol Microbiol 13: 733-743.
    • (1994) Mol Microbiol , vol.13 , pp. 733-743
    • Lange, R.1    Hengge-Aronis, R.2
  • 54
    • 0028176450 scopus 로고
    • The cellular concentration of the sigmaS subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability
    • Lange, R., and Hengge-Aronis, R. (1994b) The cellular concentration of the sigmaS subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability. Genes Dev 8: 1600-1612.
    • (1994) Genes Dev , vol.8 , pp. 1600-1612
    • Lange, R.1    Hengge-Aronis, R.2
  • 55
    • 0029082430 scopus 로고
    • Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigmaS subunit of RNA polymerase in Escherichia coli
    • Lange, R., Fischer, D., and Hengge-Aronis, R. (1995) Identification of transcriptional start sites and the role of ppGpp in the expression of rpoS, the structural gene for the sigmaS subunit of RNA polymerase in Escherichia coli. J Bacteriol 177: 4676-4680.
    • (1995) J Bacteriol , vol.177 , pp. 4676-4680
    • Lange, R.1    Fischer, D.2    Hengge-Aronis, R.3
  • 56
    • 0033639199 scopus 로고    scopus 로고
    • Riboregulation by DsrA RNA: trans-actions for global economy
    • Lease, R.A., and Belfort, M. (2000) Riboregulation by DsrA RNA: trans-actions for global economy. Mol Microbiol 38: 667-672.
    • (2000) Mol Microbiol , vol.38 , pp. 667-672
    • Lease, R.A.1    Belfort, M.2
  • 57
    • 57649156015 scopus 로고    scopus 로고
    • Vibrio vulnificus rpoS expression is repressed by direct binding of cAMP-cAMP receptor protein complex to its two promoter regions
    • Lee, H.J., Park, S.J., Choi, S.H., and Lee, K.H. (2008) Vibrio vulnificus rpoS expression is repressed by direct binding of cAMP-cAMP receptor protein complex to its two promoter regions. J Biol Chem 283: 30438-30450.
    • (2008) J Biol Chem , vol.283 , pp. 30438-30450
    • Lee, H.J.1    Park, S.J.2    Choi, S.H.3    Lee, K.H.4
  • 58
    • 0035839452 scopus 로고    scopus 로고
    • Sigma38 (rpoS) RNA polymerase promoter engagement via -10 region nucleotides
    • Lee, S.J., and Gralla, J.D. (2001) Sigma38 (rpoS) RNA polymerase promoter engagement via -10 region nucleotides. J Biol Chem 276: 30064-30071.
    • (2001) J Biol Chem , vol.276 , pp. 30064-30071
    • Lee, S.J.1    Gralla, J.D.2
  • 59
    • 0036068774 scopus 로고    scopus 로고
    • LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli
    • Lehnen, D., Blumer, C., Polen, T., Wackwitz, B., Wendisch, V.F., and Unden, G. (2002) LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli. Mol Microbiol 45: 521-532.
    • (2002) Mol Microbiol , vol.45 , pp. 521-532
    • Lehnen, D.1    Blumer, C.2    Polen, T.3    Wackwitz, B.4    Wendisch, V.F.5    Unden, G.6
  • 60
    • 0028019587 scopus 로고
    • The role of the sigma factor sigmaS (KatF) in bacterial global regulation
    • Loewen, P.C., and Hengge-Aronis, R. (1994) The role of the sigma factor sigmaS (KatF) in bacterial global regulation. Annu Rev Microbiol 48: 53-80.
    • (1994) Annu Rev Microbiol , vol.48 , pp. 53-80
    • Loewen, P.C.1    Hengge-Aronis, R.2
  • 61
    • 0026612797 scopus 로고
    • The sigma70 family: sequence conservation and evolutionary relationships
    • Lonetto, M., Gribskov, M., and Gross, C.A. (1992) The sigma70 family: sequence conservation and evolutionary relationships. J Bacteriol 174: 3843-3849.
    • (1992) J Bacteriol , vol.174 , pp. 3843-3849
    • Lonetto, M.1    Gribskov, M.2    Gross, C.A.3
  • 62
    • 80052213074 scopus 로고    scopus 로고
    • In vitro transcription profiling of the sigmaS subunit of bacterial RNA polymerase: re-definition of the sigmaS regulon and identification of sigmaS-specific promoter sequence elements
    • Maciag, A., Peano, C., Pietrelli, A., Egli, T., De Bellis, G., and Landini, P. (2011) In vitro transcription profiling of the sigmaS subunit of bacterial RNA polymerase: re-definition of the sigmaS regulon and identification of sigmaS-specific promoter sequence elements. Nucleic Acids Res 39: 5338-5355.
    • (2011) Nucleic Acids Res , vol.39 , pp. 5338-5355
    • Maciag, A.1    Peano, C.2    Pietrelli, A.3    Egli, T.4    De Bellis, G.5    Landini, P.6
  • 63
    • 0034666279 scopus 로고    scopus 로고
    • Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase
    • Maeda, H., Fujita, N., and Ishihama, A. (2000) Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase. Nucleic Acids Res 28: 3497-3503.
    • (2000) Nucleic Acids Res , vol.28 , pp. 3497-3503
    • Maeda, H.1    Fujita, N.2    Ishihama, A.3
  • 64
    • 18044367581 scopus 로고    scopus 로고
    • ppGpp: a global regulator in Escherichia coli
    • Magnusson, L.U., Farewell, A., and Nystrom, T. (2005) ppGpp: a global regulator in Escherichia coli. Trends Microbiol 13: 236-242.
    • (2005) Trends Microbiol , vol.13 , pp. 236-242
    • Magnusson, L.U.1    Farewell, A.2    Nystrom, T.3
  • 65
    • 0036437019 scopus 로고    scopus 로고
    • Regulation and mode of action of the second small RNA activator of RpoS translation, RprA
    • Majdalani, N., Hernandez, D., and Gottesman, S. (2002) Regulation and mode of action of the second small RNA activator of RpoS translation, RprA. Mol Microbiol 46: 813-826.
    • (2002) Mol Microbiol , vol.46 , pp. 813-826
    • Majdalani, N.1    Hernandez, D.2    Gottesman, S.3
  • 66
    • 70449380939 scopus 로고    scopus 로고
    • Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E.coli
    • Mendoza-Vargas, A., Olvera, L., Olvera, M., Grande, R., Vega-Alvarado, L., Taboada, B., etal. (2009) Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E.coli. PLoS ONE 4: e7526.
    • (2009) PLoS ONE , vol.4
    • Mendoza-Vargas, A.1    Olvera, L.2    Olvera, M.3    Grande, R.4    Vega-Alvarado, L.5    Taboada, B.6
  • 67
    • 72449139712 scopus 로고    scopus 로고
    • Growth phase and (p)ppGpp control of IraD, a regulator of RpoS stability, in Escherichia coli
    • Merrikh, H., Ferrazzoli, A.E., and Lovett, S.T. (2009) Growth phase and (p)ppGpp control of IraD, a regulator of RpoS stability, in Escherichia coli. J Bacteriol 191: 7436-7446.
    • (2009) J Bacteriol , vol.191 , pp. 7436-7446
    • Merrikh, H.1    Ferrazzoli, A.E.2    Lovett, S.T.3
  • 68
    • 27744589294 scopus 로고    scopus 로고
    • A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E.coli
    • Mika, F., and Hengge, R. (2005) A two-component phosphotransfer network involving ArcB, ArcA, and RssB coordinates synthesis and proteolysis of sigmaS (RpoS) in E.coli. Genes Dev 19: 2770-2781.
    • (2005) Genes Dev , vol.19 , pp. 2770-2781
    • Mika, F.1    Hengge, R.2
  • 69
    • 0141605202 scopus 로고    scopus 로고
    • Identification and analysis of 'extended -10' promoters in Escherichia coli
    • Mitchell, J.E., Zheng, D., Busby, S.J., and Minchin, S.D. (2003) Identification and analysis of 'extended -10' promoters in Escherichia coli. Nucleic Acids Res 31: 4689-4695.
    • (2003) Nucleic Acids Res , vol.31 , pp. 4689-4695
    • Mitchell, J.E.1    Zheng, D.2    Busby, S.J.3    Minchin, S.D.4
  • 70
    • 0029897937 scopus 로고    scopus 로고
    • The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli
    • Muffler, A., Fischer, D., and Hengge-Aronis, R. (1996) The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli. Genes Dev 10: 1143-1151.
    • (1996) Genes Dev , vol.10 , pp. 1143-1151
    • Muffler, A.1    Fischer, D.2    Hengge-Aronis, R.3
  • 71
    • 9244230099 scopus 로고    scopus 로고
    • Stationary-phase physiology
    • Nystrom, T. (2004) Stationary-phase physiology. Annu Rev Microbiol 58: 161-181.
    • (2004) Annu Rev Microbiol , vol.58 , pp. 161-181
    • Nystrom, T.1
  • 73
    • 84862218883 scopus 로고    scopus 로고
    • The global repressor FliZ antagonizes gene expression by sigmaS-containing RNA polymerase due to overlapping DNA binding specificity
    • Pesavento, C., and Hengge, R. (2012) The global repressor FliZ antagonizes gene expression by sigmaS-containing RNA polymerase due to overlapping DNA binding specificity. Nucleic Acids Res 40: 4783-4793.
    • (2012) Nucleic Acids Res , vol.40 , pp. 4783-4793
    • Pesavento, C.1    Hengge, R.2
  • 74
    • 33646239816 scopus 로고    scopus 로고
    • LrhA regulates rpoS translation in response to the Rcs phosphorelay system in Escherichia coli
    • Peterson, C.N., Carabetta, V.J., Chowdhury, T., and Silhavy, T.J. (2006) LrhA regulates rpoS translation in response to the Rcs phosphorelay system in Escherichia coli. J Bacteriol 188: 3175-3181.
    • (2006) J Bacteriol , vol.188 , pp. 3175-3181
    • Peterson, C.N.1    Carabetta, V.J.2    Chowdhury, T.3    Silhavy, T.J.4
  • 75
    • 0035142067 scopus 로고    scopus 로고
    • Role of CspC and CspE in regulation of expression of RpoS and UspA, the stress response proteins in Escherichia coli
    • Phadtare, S., and Inouye, M. (2001) Role of CspC and CspE in regulation of expression of RpoS and UspA, the stress response proteins in Escherichia coli. J Bacteriol 183: 1205-1214.
    • (2001) J Bacteriol , vol.183 , pp. 1205-1214
    • Phadtare, S.1    Inouye, M.2
  • 76
    • 0027761839 scopus 로고
    • A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase
    • Ross, W., Gosink, K.K., Salomon, J., Igarashi, K., Zou, C., Ishihama, A., etal. (1993) A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase. Science 262: 1407-1413.
    • (1993) Science , vol.262 , pp. 1407-1413
    • Ross, W.1    Gosink, K.K.2    Salomon, J.3    Igarashi, K.4    Zou, C.5    Ishihama, A.6
  • 77
    • 0034815673 scopus 로고    scopus 로고
    • RpoS-dependent transcriptional control of sprE: regulatory feedback loop
    • Ruiz, N., Peterson, C.N., and Silhavy, T.J. (2001) RpoS-dependent transcriptional control of sprE: regulatory feedback loop. J Bacteriol 183: 5974-5981.
    • (2001) J Bacteriol , vol.183 , pp. 5974-5981
    • Ruiz, N.1    Peterson, C.N.2    Silhavy, T.J.3
  • 79
    • 0020891851 scopus 로고
    • Escherichia coli habitats, cell types, and molecular mechanisms of gene control
    • Savageau, M.A. (1983) Escherichia coli habitats, cell types, and molecular mechanisms of gene control. Am Nat 122: 732-744.
    • (1983) Am Nat , vol.122 , pp. 732-744
    • Savageau, M.A.1
  • 80
    • 0023780699 scopus 로고
    • Transcriptional regulation of katE in Escherichia coli K-12
    • Schellhorn, H.E., and Hassan, H.M. (1988) Transcriptional regulation of katE in Escherichia coli K-12. J Bacteriol 170: 4286-4292.
    • (1988) J Bacteriol , vol.170 , pp. 4286-4292
    • Schellhorn, H.E.1    Hassan, H.M.2
  • 81
    • 0031756183 scopus 로고    scopus 로고
    • Identification of conserved, RpoS-dependent stationary-phase genes of Escherichia coli
    • Schellhorn, H.E., Audia, J.P., Wei, L.I., and Chang, L. (1998) Identification of conserved, RpoS-dependent stationary-phase genes of Escherichia coli. J Bacteriol 180: 6283-6291.
    • (1998) J Bacteriol , vol.180 , pp. 6283-6291
    • Schellhorn, H.E.1    Audia, J.P.2    Wei, L.I.3    Chang, L.4
  • 82
    • 0030033933 scopus 로고    scopus 로고
    • Regulation of Escherichia coli starvation sigma factor (sigma s) by ClpXP protease
    • Schweder, T., Lee, K.H., Lomovskaya, O., and Matin, A. (1996) Regulation of Escherichia coli starvation sigma factor (sigma s) by ClpXP protease. J Bacteriol 178: 470-476.
    • (1996) J Bacteriol , vol.178 , pp. 470-476
    • Schweder, T.1    Lee, K.H.2    Lomovskaya, O.3    Matin, A.4
  • 83
    • 10344238617 scopus 로고    scopus 로고
    • Are respiratory enzymes the primary sources of intracellular hydrogen peroxide?
    • Seaver, L.C., and Imlay, J.A. (2004) Are respiratory enzymes the primary sources of intracellular hydrogen peroxide? J Biol Chem 279: 48742-48750.
    • (2004) J Biol Chem , vol.279 , pp. 48742-48750
    • Seaver, L.C.1    Imlay, J.A.2
  • 84
    • 0024371540 scopus 로고
    • Altered promoter recognition by mutant forms of the sigma70 subunit of Escherichia coli RNA polymerase
    • Siegele, D.A., Hu, J.C., Walter, W.A., and Gross, C.A. (1989) Altered promoter recognition by mutant forms of the sigma70 subunit of Escherichia coli RNA polymerase. J Mol Biol 206: 591-603.
    • (1989) J Mol Biol , vol.206 , pp. 591-603
    • Siegele, D.A.1    Hu, J.C.2    Walter, W.A.3    Gross, C.A.4
  • 85
    • 79960237269 scopus 로고    scopus 로고
    • Escherichia coli {sigma}70 senses sequence and conformation of the promoter spacer region
    • Singh, S.S., Typas, A., Hengge, R., and Grainger, D.C. (2011) Escherichia coli {sigma}70 senses sequence and conformation of the promoter spacer region. Nucleic Acids Res 39: 5109-5118.
    • (2011) Nucleic Acids Res , vol.39 , pp. 5109-5118
    • Singh, S.S.1    Typas, A.2    Hengge, R.3    Grainger, D.C.4
  • 86
    • 61449200221 scopus 로고    scopus 로고
    • Gene expression patterns and differential input into curli fimbriae regulation of all GGDEF/EAL domain proteins in Escherichia coli
    • Sommerfeldt, N., Possling, A., Becker, G., Pesavento, C., Tschowri, N., and Hengge, R. (2009) Gene expression patterns and differential input into curli fimbriae regulation of all GGDEF/EAL domain proteins in Escherichia coli. Microbiology 155: 1318-1331.
    • (2009) Microbiology , vol.155 , pp. 1318-1331
    • Sommerfeldt, N.1    Possling, A.2    Becker, G.3    Pesavento, C.4    Tschowri, N.5    Hengge, R.6
  • 87
    • 0027469990 scopus 로고
    • Heterogeneity of the principal sigma factor in Escherichia coli: the rpoS gene product, sigma38, is a second principal sigma factor of RNA polymerase in stationary-phase Escherichia coli
    • Tanaka, K., Takayanagi, Y., Fujita, N., Ishihama, A., and Takahashi, H. (1993) Heterogeneity of the principal sigma factor in Escherichia coli: the rpoS gene product, sigma38, is a second principal sigma factor of RNA polymerase in stationary-phase Escherichia coli. Proc Natl Acad Sci USA 90: 3511-3515.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 3511-3515
    • Tanaka, K.1    Takayanagi, Y.2    Fujita, N.3    Ishihama, A.4    Takahashi, H.5
  • 88
    • 0036237890 scopus 로고    scopus 로고
    • Functional characterization and regulation of gadX, a gene encoding an AraC/XylS-like transcriptional activator of the Escherichia coli glutamic acid decarboxylase system
    • Tramonti, A., Visca, P., Di Canio, M., Falconi, M., and De Biase, D. (2002) Functional characterization and regulation of gadX, a gene encoding an AraC/XylS-like transcriptional activator of the Escherichia coli glutamic acid decarboxylase system. J Bacteriol 184: 2603-2613.
    • (2002) J Bacteriol , vol.184 , pp. 2603-2613
    • Tramonti, A.1    Visca, P.2    Di Canio, M.3    Falconi, M.4    De Biase, D.5
  • 89
    • 80054060254 scopus 로고    scopus 로고
    • A multifactor regulatory circuit involving H-NS, VirF and an antisense RNA modulates transcription of the virulence gene icsA of Shigella flexneri
    • Tran, C.N., Giangrossi, M., Prosseda, G., Brandi, A., Di Martino, M.L., Colonna, B., and Falconi, M. (2011) A multifactor regulatory circuit involving H-NS, VirF and an antisense RNA modulates transcription of the virulence gene icsA of Shigella flexneri. Nucleic Acids Res 39: 8122-8134.
    • (2011) Nucleic Acids Res , vol.39 , pp. 8122-8134
    • Tran, C.N.1    Giangrossi, M.2    Prosseda, G.3    Brandi, A.4    Di Martino, M.L.5    Colonna, B.6    Falconi, M.7
  • 90
    • 0019332796 scopus 로고
    • A tRNATyr promoter with an altered in vitro response to ppGpp
    • Travers, A.A. (1980) A tRNATyr promoter with an altered in vitro response to ppGpp. J Mol Biol 141: 91-97.
    • (1980) J Mol Biol , vol.141 , pp. 91-97
    • Travers, A.A.1
  • 91
    • 18344371528 scopus 로고    scopus 로고
    • A highly conserved 6S RNA structure is required for regulation of transcription
    • Trotochaud, A.E., and Wassarman, K.M. (2005) A highly conserved 6S RNA structure is required for regulation of transcription. Nat Struct Mol Biol 12: 313-319.
    • (2005) Nat Struct Mol Biol , vol.12 , pp. 313-319
    • Trotochaud, A.E.1    Wassarman, K.M.2
  • 92
    • 33748627985 scopus 로고    scopus 로고
    • The PhoP/PhoQ two-component system stabilizes the alternative sigma factor RpoS in Salmonella enterica
    • Tu, X., Latifi, T., Bougdour, A., Gottesman, S., and Groisman, E.A. (2006) The PhoP/PhoQ two-component system stabilizes the alternative sigma factor RpoS in Salmonella enterica. Proc Natl Acad Sci USA 103: 13503-13508.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 13503-13508
    • Tu, X.1    Latifi, T.2    Bougdour, A.3    Gottesman, S.4    Groisman, E.A.5
  • 93
    • 12344252276 scopus 로고    scopus 로고
    • Differential ability of sigmaS and sigma70 of Escherichia coli to utilize promoters containing half or full UP-element sites
    • Typas, A., and Hengge, R. (2005) Differential ability of sigmaS and sigma70 of Escherichia coli to utilize promoters containing half or full UP-element sites. Mol Microbiol 55: 250-260.
    • (2005) Mol Microbiol , vol.55 , pp. 250-260
    • Typas, A.1    Hengge, R.2
  • 94
    • 33645088941 scopus 로고    scopus 로고
    • Role of the spacer between the -35 and -10 regions in sigmas promoter selectivity in Escherichia coli
    • Typas, A., and Hengge, R. (2006) Role of the spacer between the -35 and -10 regions in sigmas promoter selectivity in Escherichia coli. Mol Microbiol 59: 1037-1051.
    • (2006) Mol Microbiol , vol.59 , pp. 1037-1051
    • Typas, A.1    Hengge, R.2
  • 95
    • 33947608392 scopus 로고    scopus 로고
    • Stationary phase reorganisation of the Escherichia coli transcription machinery by Crl protein, a fine-tuner of sigmaS activity and levels
    • Typas, A., Barembruch, C., Possling, A., and Hengge, R. (2007a) Stationary phase reorganisation of the Escherichia coli transcription machinery by Crl protein, a fine-tuner of sigmaS activity and levels. EMBO J 26: 1569-1578.
    • (2007) EMBO J , vol.26 , pp. 1569-1578
    • Typas, A.1    Barembruch, C.2    Possling, A.3    Hengge, R.4
  • 96
    • 33846947959 scopus 로고    scopus 로고
    • The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase
    • Typas, A., Becker, G., and Hengge, R. (2007b) The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase. Mol Microbiol 63: 1296-1306.
    • (2007) Mol Microbiol , vol.63 , pp. 1296-1306
    • Typas, A.1    Becker, G.2    Hengge, R.3
  • 97
    • 33846262416 scopus 로고    scopus 로고
    • The -35 sequence location and the Fis-sigma factor interface determine sigmas selectivity of the proP (P2) promoter in Escherichia coli
    • Typas, A., Stella, S., Johnson, R.C., and Hengge, R. (2007c) The -35 sequence location and the Fis-sigma factor interface determine sigmas selectivity of the proP (P2) promoter in Escherichia coli. Mol Microbiol 63: 780-796.
    • (2007) Mol Microbiol , vol.63 , pp. 780-796
    • Typas, A.1    Stella, S.2    Johnson, R.C.3    Hengge, R.4
  • 98
    • 0037709130 scopus 로고    scopus 로고
    • Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different?
    • Venturi, V. (2003) Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different? Mol Microbiol 49: 1-9.
    • (2003) Mol Microbiol , vol.49 , pp. 1-9
    • Venturi, V.1
  • 99
    • 0028174518 scopus 로고
    • The Δ(argF-lacZ)205(U169) deletion greatly enhances resistance to hydrogen peroxide in stationary-phase Escherichia coli
    • Volkert, M.R., Loewen, P.C., Switala, J., Crowley, D., and Conley, M. (1994) The Δ(argF-lacZ)205(U169) deletion greatly enhances resistance to hydrogen peroxide in stationary-phase Escherichia coli. J Bacteriol 176: 1297-1302.
    • (1994) J Bacteriol , vol.176 , pp. 1297-1302
    • Volkert, M.R.1    Loewen, P.C.2    Switala, J.3    Crowley, D.4    Conley, M.5
  • 100
    • 0025066083 scopus 로고
    • Changes in conserved region 2 of Escherichia coli sigma70 affecting promoter recognition
    • Waldburger, C., Gardella, T., Wong, R., and Susskind, M.M. (1990) Changes in conserved region 2 of Escherichia coli sigma70 affecting promoter recognition. J Mol Biol 215: 267-276.
    • (1990) J Mol Biol , vol.215 , pp. 267-276
    • Waldburger, C.1    Gardella, T.2    Wong, R.3    Susskind, M.M.4
  • 101
    • 79956074557 scopus 로고    scopus 로고
    • Antitoxin MqsA helps mediate the bacterial general stress response
    • Wang, X., Kim, Y., Hong, S.H., Ma, Q., Brown, B.L., Pu, M., etal. (2011) Antitoxin MqsA helps mediate the bacterial general stress response. Nat Chem Biol 7: 359-366.
    • (2011) Nat Chem Biol , vol.7 , pp. 359-366
    • Wang, X.1    Kim, Y.2    Hong, S.H.3    Ma, Q.4    Brown, B.L.5    Pu, M.6
  • 102
    • 0035395606 scopus 로고    scopus 로고
    • Identification of novel small RNAs using comparative genomics and microarrays
    • Wassarman, K.M., Repoila, F., Rosenow, C., Storz, G., and Gottesman, S. (2001) Identification of novel small RNAs using comparative genomics and microarrays. Genes Dev 15: 1637-1651.
    • (2001) Genes Dev , vol.15 , pp. 1637-1651
    • Wassarman, K.M.1    Repoila, F.2    Rosenow, C.3    Storz, G.4    Gottesman, S.5
  • 103
    • 14244256556 scopus 로고    scopus 로고
    • Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity
    • Weber, H., Polen, T., Heuveling, J., Wendisch, V.F., and Hengge, R. (2005) Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. J Bacteriol 187: 1591-1603.
    • (2005) J Bacteriol , vol.187 , pp. 1591-1603
    • Weber, H.1    Polen, T.2    Heuveling, J.3    Wendisch, V.F.4    Hengge, R.5
  • 104
    • 33646270617 scopus 로고    scopus 로고
    • Thin aggregative fimbriae and cellulose enhance long-term survival and persistence of Salmonella
    • White, A.P., Gibson, D.L., Kim, W., Kay, W.W., and Surette, M.G. (2006) Thin aggregative fimbriae and cellulose enhance long-term survival and persistence of Salmonella. J Bacteriol 188: 3219-3227.
    • (2006) J Bacteriol , vol.188 , pp. 3219-3227
    • White, A.P.1    Gibson, D.L.2    Kim, W.3    Kay, W.W.4    Surette, M.G.5
  • 105
    • 0036736638 scopus 로고    scopus 로고
    • The apparent clock-like evolution of Escherichia coli in glucose-limited chemostats is reproducible at large but not at small population sizes and can be explained with Monod kinetics
    • Wick, L.M., Weilenmann, H., and Egli, T. (2002) The apparent clock-like evolution of Escherichia coli in glucose-limited chemostats is reproducible at large but not at small population sizes and can be explained with Monod kinetics. Microbiology 148: 2889-2902.
    • (2002) Microbiology , vol.148 , pp. 2889-2902
    • Wick, L.M.1    Weilenmann, H.2    Egli, T.3
  • 106
    • 0024446071 scopus 로고
    • Influence of the GCGC discriminator motif introduced into the ribosomal RNA P2- and tac promoter on growth-rate control and stringent sensitivity
    • Zacharias, M., Goringer, H.U., and Wagner, R. (1989) Influence of the GCGC discriminator motif introduced into the ribosomal RNA P2- and tac promoter on growth-rate control and stringent sensitivity. EMBO J 8: 3357-3363.
    • (1989) EMBO J , vol.8 , pp. 3357-3363
    • Zacharias, M.1    Goringer, H.U.2    Wagner, R.3
  • 107
    • 0027510647 scopus 로고
    • Microbial competition: Escherichia coli mutants that take over stationary phase cultures
    • Zambrano, M.M., Siegele, D.A., Almiron, M., Tormo, A., and Kolter, R. (1993) Microbial competition: Escherichia coli mutants that take over stationary phase cultures. Science 259: 1757-1760.
    • (1993) Science , vol.259 , pp. 1757-1760
    • Zambrano, M.M.1    Siegele, D.A.2    Almiron, M.3    Tormo, A.4    Kolter, R.5
  • 108
    • 0032531904 scopus 로고    scopus 로고
    • The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein
    • Zhang, A., Altuvia, S., Tiwari, A., Argaman, L., Hengge-Aronis, R., and Storz, G. (1998) The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein. EMBO J 17: 6061-6068.
    • (1998) EMBO J , vol.17 , pp. 6061-6068
    • Zhang, A.1    Altuvia, S.2    Tiwari, A.3    Argaman, L.4    Hengge-Aronis, R.5    Storz, G.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.