-
1
-
-
0033615717
-
DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
-
doi:10.1016/S0092-8674(00)81656-6. PubMed: 10555141
-
Okano M, Bell DW, Haber DA, Li E (1999) DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell 99: 247-257. doi:10.1016/S0092-8674(00)81656-6. PubMed: 10555141.
-
(1999)
Cell
, vol.99
, pp. 247-257
-
-
Okano, M.1
Bell, D.W.2
Haber, D.A.3
Li, E.4
-
2
-
-
0035444277
-
Enzymatic properties of de novo-type mouse DNA (cytosine-5) methyltransferases
-
doi:10.1093/nar/29.17.3506. PubMed: 11522819
-
Aoki A, Suetake I, Miyagawa J, Fujio T, Chijiwa T et al. (2001)Enzymatic properties of de novo-type mouse DNA (cytosine-5) methyltransferases. Nucleic Acids Res 29: 3506-3512. doi:10.1093/nar/29.17.3506. PubMed: 11522819.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 3506-3512
-
-
Aoki, A.1
Suetake, I.2
Miyagawa, J.3
Fujio, T.4
Chijiwa, T.5
-
3
-
-
0042311434
-
Distinct enzymatic properties of recombinant mouse DNA methyltransferases Dnmt3a and Dnmt3b
-
doi:10.1093/jb/mvg095. PubMed: 12869530
-
Suetake I, Miyazaki J, Murakami C, Takeshima T, Tajima S (2003) Distinct enzymatic properties of recombinant mouse DNA methyltransferases Dnmt3a and Dnmt3b. J Biochem 133: 737-744. doi:10.1093/jb/mvg095. PubMed: 12869530.
-
(2003)
J Biochem
, vol.133
, pp. 737-744
-
-
Suetake, I.1
Miyazaki, J.2
Murakami, C.3
Takeshima, T.4
Tajima, S.5
-
4
-
-
0036803302
-
Stage- and cell-specific expression of Dnmt3a and Dnmt3b during embryogenesis
-
doi:10.1016/S0925-4773(02)00242-3. PubMed: 12351185
-
Watanabe D, Suetake I, Tada T, Tajima S (2002) Stage- and cell-specific expression of Dnmt3a and Dnmt3b during embryogenesis. Mech Dev 118: 187-190. doi:10.1016/S0925-4773(02)00242-3. PubMed: 12351185.
-
(2002)
Mech Dev
, vol.118
, pp. 187-190
-
-
Watanabe, D.1
Suetake, I.2
Tada, T.3
Tajima, S.4
-
5
-
-
10244242675
-
Co-expression of de novo DNA methyltransferases Dnmt3a2 and Dnmt3L in gonocytes of mouse embryos
-
doi:10.1016/j.modgep.2004.07.011. PubMed: 15567719
-
Sakai Y, Suetake I, Shinozaki F, Yamashina S, Tajima S (2004) Co-expression of de novo DNA methyltransferases Dnmt3a2 and Dnmt3L in gonocytes of mouse embryos. Gene Expr Patterns 5: 231-237. doi:10.1016/j.modgep.2004.07. 011. PubMed: 15567719.
-
(2004)
Gene Expr Patterns
, vol.5
, pp. 231-237
-
-
Sakai, Y.1
Suetake, I.2
Shinozaki, F.3
Yamashina, S.4
Tajima, S.5
-
6
-
-
0026708177
-
Targeted mutation of the DNA methyltransferase gene results in embryonic lethality
-
doi:10.1016/0092-8674(92)90611-F. PubMed: 1606615
-
Li E, Bestor TH, Jaenisch R (1992) Targeted mutation of the DNA methyltransferase gene results in embryonic lethality. Cell 69: 915-926. doi:10.1016/0092-8674(92)90611-F. PubMed: 1606615.
-
(1992)
Cell
, vol.69
, pp. 915-926
-
-
Li, E.1
Bestor, T.H.2
Jaenisch, R.3
-
7
-
-
12844278737
-
Processive methylation of hemimethylated CpG sites by mouse Dnmt1 DNA methyltransferase
-
PubMed: 15509558
-
Vilkaitis G, Suetake I, Klimasauskas S, Tajima S (2005) Processive methylation of hemimethylated CpG sites by mouse Dnmt1 DNA methyltransferase. J Biol Chem 280: 64-72. PubMed: 15509558.
-
(2005)
J Biol Chem
, vol.280
, pp. 64-72
-
-
Vilkaitis, G.1
Suetake, I.2
Klimasauskas, S.3
Tajima, S.4
-
8
-
-
36849072573
-
The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA
-
doi:10.1038/nature06397. PubMed: 17994007
-
Sharif J, Muto M, Takebayashi S, Suetake I, Iwamatsu A et al. (2007) The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA. Nature 450: 908-912. doi:10.1038/nature06397. PubMed: 17994007.
-
(2007)
Nature
, vol.450
, pp. 908-912
-
-
Sharif, J.1
Muto, M.2
Takebayashi, S.3
Suetake, I.4
Iwamatsu, A.5
-
9
-
-
53649097070
-
Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
-
doi:10.1038/nature07249. PubMed: 18772891
-
Arita K, Ariyoshi M, Tochio H, Nakamura Y, Shirakawa M (2008) Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism. Nature 455: 818-821. doi:10.1038/nature07249. PubMed: 18772891.
-
(2008)
Nature
, vol.455
, pp. 818-821
-
-
Arita, K.1
Ariyoshi, M.2
Tochio, H.3
Nakamura, Y.4
Shirakawa, M.5
-
10
-
-
53649088595
-
Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1
-
doi:10.1038/nature07273. PubMed: 18772889
-
Avvakumov GV, Walker JR, Xue S, Li Y, Duan S et al. (2008) Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1. Nature 455: 822-825. doi:10.1038/nature07273. PubMed: 18772889.
-
(2008)
Nature
, vol.455
, pp. 822-825
-
-
Avvakumov, G.V.1
Walker, J.R.2
Xue, S.3
Li, Y.4
Duan, S.5
-
11
-
-
53649089723
-
The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix
-
doi:10.1038/nature07280. PubMed: 18772888
-
Hashimoto H, Horton JR, Zhang H, Bostick M, Jacobsen SE et al. (2008) The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix. Nature 455: 826-829. doi:10.1038/nature07280. PubMed: 18772888.
-
(2008)
Nature
, vol.455
, pp. 826-829
-
-
Hashimoto, H.1
Horton, J.R.2
Zhang, H.3
Bostick, M.4
Jacobsen, S.E.5
-
12
-
-
45449114804
-
The colorful history of active DNA demethylation
-
doi:10.1016/j.cell.2008.06.009. PubMed: 18585349
-
Ooi SK, Bestor TH (2008) The colorful history of active DNA demethylation. Cell 133: 1145-1148. doi:10.1016/j.cell.2008.06.009. PubMed: 18585349.
-
(2008)
Cell
, vol.133
, pp. 1145-1148
-
-
Ooi, S.K.1
Bestor, T.H.2
-
13
-
-
77956095231
-
Active DNA demethylation: Many roads lead to Rome
-
doi:10.1038/nrm2950. PubMed: 20683471
-
Wu SC, Zhang Y (2010) Active DNA demethylation: many roads lead to Rome. Nat Rev Mol Cell Biol 11: 607-620. doi:10.1038/nrm2950. PubMed: 20683471.
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, pp. 607-620
-
-
Wu, S.C.1
Zhang, Y.2
-
14
-
-
66149146320
-
Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1
-
doi:10.1126/science.1170116. PubMed: 19372391
-
Tahiliani M, Koh KP, Shen Y, Pastor WA, Bandukwala H et al. (2009) Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1. Science 324: 930-935. doi:10.1126/science.1170116. PubMed: 19372391.
-
(2009)
Science
, vol.324
, pp. 930-935
-
-
Tahiliani, M.1
Koh, K.P.2
Shen, Y.3
Pastor, W.A.4
Bandukwala, H.5
-
15
-
-
77956189495
-
Roles of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification
-
doi:10.1038/nature09303. PubMed: 20639862
-
Ito S, D'Alessio AC, Taranova OV, Hong K, Sowers LC et al. (2010) Roles of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification. Nature 466: 1129-1133. doi:10.1038/nature09303. PubMed: 20639862.
-
(2010)
Nature
, vol.466
, pp. 1129-1133
-
-
Ito, S.1
D'Alessio, A.C.2
Taranova, O.V.3
Hong, K.4
Sowers, L.C.5
-
16
-
-
79956323623
-
Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation
-
doi:10.1038/nature10008. PubMed: 21460836
-
Ficz G, Branco MR, Seisenberger S, Santos F, Krueger F et al. (2011) Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation. Nature 473: 398-402. doi:10.1038/nature10008. PubMed: 21460836.
-
(2011)
Nature
, vol.473
, pp. 398-402
-
-
Ficz, G.1
Branco, M.R.2
Seisenberger, S.3
Santos, F.4
Krueger, F.5
-
17
-
-
79956308473
-
Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells
-
doi:10.1038/nature10102. PubMed: 21552279
-
Pastor WA, Pape UJ, Huang Y, Henderson HR, Lister R et al. (2011) Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells. Nature 473: 394-397. doi:10.1038/nature10102. PubMed: 21552279.
-
(2011)
Nature
, vol.473
, pp. 394-397
-
-
Pastor, W.A.1
Pape, U.J.2
Huang, Y.3
Henderson, H.R.4
Lister, R.5
-
18
-
-
79956302047
-
TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity
-
doi:10.1038/nature10066. PubMed: 21490601
-
Williams K, Christensen J, Pedersen MT, Johansen JV, Cloos PA et al. (2011) TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity. Nature 473: 343-348. doi:10.1038/nature10066. PubMed: 21490601.
-
(2011)
Nature
, vol.473
, pp. 343-348
-
-
Williams, K.1
Christensen, J.2
Pedersen, M.T.3
Johansen, J.V.4
Cloos, P.A.5
-
19
-
-
79954457998
-
Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells
-
doi:10.1101/gad.2036011. PubMed: 21460036
-
Wu H, D'Alessio AC, Ito S, Wang Z, Cui K et al. (2011) Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells. Genes Dev 25: 679-684. doi:10.1101/gad.2036011. PubMed: 21460036.
-
(2011)
Genes Dev
, vol.25
, pp. 679-684
-
-
Wu, H.1
D'Alessio, A.C.2
Ito, S.3
Wang, Z.4
Cui, K.5
-
20
-
-
79955948324
-
Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells
-
doi:10.1016/j.molcel.2011.04.005. PubMed: 21514197
-
Xu Y, Wu F, Tan L, Kong L, Xiong L et al. (2011) Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells. Mol Cell 42: 451-464. doi:10.1016/j.molcel.2011.04.005. PubMed: 21514197.
-
(2011)
Mol Cell
, vol.42
, pp. 451-464
-
-
Xu, Y.1
Wu, F.2
Tan, L.3
Kong, L.4
Xiong, L.5
-
21
-
-
79956292024
-
Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells
-
doi:10.1038/nature09934. PubMed: 21451524
-
Wu H, D'Alessio AC, Ito S, Xia K, Wang Z et al. (2011) Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells. Nature 473: 389-393. doi:10.1038/nature09934. PubMed: 21451524.
-
(2011)
Nature
, vol.473
, pp. 389-393
-
-
Wu, H.1
D'Alessio, A.C.2
Ito, S.3
Xia, K.4
Wang, Z.5
-
22
-
-
80053348585
-
The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes
-
doi:10.1038/nature10443. PubMed: 21892189
-
Gu TP, Guo F, Yang H, Wu HP, Xu GF et al. (2011) The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes. Nature 477: 606-610. doi:10.1038/nature10443. PubMed: 21892189.
-
(2011)
Nature
, vol.477
, pp. 606-610
-
-
Gu, T.P.1
Guo, F.2
Yang, H.3
Wu, H.P.4
Xu, G.F.5
-
23
-
-
79952713567
-
5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming
-
doi:10.1038/ncomms1240. PubMed: 21407207
-
Wossidlo M, Nakamura T, Lepikhov K, Marques CJ, Zakhartchenko V et al. (2011) 5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming. Nat Commun 2: 241. doi:10.1038/ncomms1240. PubMed: 21407207.
-
(2011)
Nat Commun
, vol.2
, pp. 241
-
-
Wossidlo, M.1
Nakamura, T.2
Lepikhov, K.3
Marques, C.J.4
Zakhartchenko, V.5
-
24
-
-
0029803192
-
De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells
-
PubMed: 8898232
-
Lei H, Oh SP, Okano M, Jüttermann R, Goss KA et al. (1996) De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells. Development 122: 3195-3205. PubMed: 8898232.
-
(1996)
Development
, vol.122
, pp. 3195-3205
-
-
Lei, H.1
Oh, S.P.2
Okano, M.3
Jüttermann, R.4
Goss, K.A.5
-
25
-
-
33745270104
-
Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b
-
doi:10.1111/j.1365-2443.2006.00984.x. PubMed: 16824199
-
Tsumura A, Hayakawa T, Kumaki Y, Takebayashi S, Sakaue M et al. (2006) Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b. Genes Cells 11: 805-814. doi:10.1111/j.1365-2443.2006.00984.x. PubMed: 16824199.
-
(2006)
Genes Cells
, vol.11
, pp. 805-814
-
-
Tsumura, A.1
Hayakawa, T.2
Kumaki, Y.3
Takebayashi, S.4
Sakaue, M.5
-
26
-
-
21344451374
-
Cell cycle synchronization of embryonic stem cells: Effect of serum deprivation on the differentiation of embryonic bodies in vitro
-
doi:10.1016/j.bbrc.2005.05.200. PubMed: 15975550
-
Zhang E, Li X, Zhang S, Chen L, Zheng X (2005) Cell cycle synchronization of embryonic stem cells: effect of serum deprivation on the differentiation of embryonic bodies in vitro. Biochem Biophys Res Commun 333: 1171-1177. doi:10.1016/j.bbrc.2005.05.200. PubMed: 15975550.
-
(2005)
Biochem Biophys Res Commun
, vol.333
, pp. 1171-1177
-
-
Zhang, E.1
Li, X.2
Zhang, S.3
Chen, L.4
Zheng, X.5
-
27
-
-
0031749011
-
Nuclear localization of cyclin B1 controls mitotic entry after DNA damage
-
doi:10.1083/jcb.141.4.875. PubMed: 9585407
-
Jin P, Hardy S, Morgan DO (1998) Nuclear localization of cyclin B1 controls mitotic entry after DNA damage. J Cell Biol 141: 875-885. doi:10.1083/jcb.141.4.875. PubMed: 9585407.
-
(1998)
J Cell Biol
, vol.141
, pp. 875-885
-
-
Jin, P.1
Hardy, S.2
Morgan, D.O.3
-
28
-
-
79959368232
-
Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1)
-
doi:10.1073/pnas.1019629108. PubMed: 21518897
-
Takeshita K, Suetake I, Yamashita E, Suga M, Narita H et al. (2011) Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc Natl Acad Sci U S A 108: 9055-9059. doi:10.1073/pnas.1019629108. PubMed: 21518897.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 9055-9059
-
-
Takeshita, K.1
Suetake, I.2
Yamashita, E.3
Suga, M.4
Narita, H.5
-
29
-
-
78049401678
-
Sensitive enzymatic quantification of 5-hydroxymethylcytosine in genomic
-
doi:10.1093/nar/gkq684
-
Szwagierczak A, Bultmann S, Schmidt CS, Spada F, Leonhardt H (2010) Sensitive enzymatic quantification of 5-hydroxymethylcytosine in genomic. DNA - Nucleic Acids Res 38: e181. doi:10.1093/nar/gkq684.
-
(2010)
DNA - Nucleic Acids Res
, vol.38
-
-
Szwagierczak, A.1
Bultmann, S.2
Schmidt, C.S.3
Spada, F.4
Leonhardt, H.5
-
31
-
-
78651280460
-
Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine
-
doi:10.1038/nbt.1732. PubMed: 21151123
-
Song CX, Szulwach KE, Fu Y, Dai Q, Yi C et al. (2011) Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine. Nat Biotechnol 29: 68-72. doi:10.1038/nbt.1732. PubMed: 21151123.
-
(2011)
Nat Biotechnol
, vol.29
, pp. 68-72
-
-
Song, C.X.1
Szulwach, K.E.2
Fu, Y.3
Dai, Q.4
Yi, C.5
-
32
-
-
84864326005
-
Genome-wide analysis of DNA methylation and expression of microRNAs in breast cancer cells
-
doi:10.3390/ijms13078259. PubMed: 22942701
-
Morita S, Takahashi RU, Yamashita R, Toyoda A, Horii T et al. (2012) Genome-wide analysis of DNA methylation and expression of microRNAs in breast cancer cells. Int J Mol Sci 13: 8259-8272. doi:10.3390/ijms13078259. PubMed: 22942701.
-
(2012)
Int J Mol Sci
, vol.13
, pp. 8259-8272
-
-
Morita, S.1
Takahashi, R.U.2
Yamashita, R.3
Toyoda, A.4
Horii, T.5
-
33
-
-
0035906936
-
Solution structure of the methyl-CpG binding domain of human MBD1 in a complex with methylated DNA
-
doi:10.1016/S0092-8674(01)00324-5. PubMed: 11371345
-
Ohki I, Shimotake N, Fujita N, Jee J, Ikegami T et al. (2001) Solution structure of the methyl-CpG binding domain of human MBD1 in a complex with methylated DNA. Cell 105: 487-497. doi:10.1016/S0092-8674(01)00324-5. PubMed: 11371345.
-
(2001)
Cell
, vol.105
, pp. 487-497
-
-
Ohki, I.1
Shimotake, N.2
Fujita, N.3
Jee, J.4
Ikegami, T.5
-
34
-
-
33750733285
-
Genome-wide analysis of histone modifications by ChIP-on-chip
-
doi:10.1016/j.ymeth.2006.07.032. PubMed: 17101450
-
Huebert DJ, Kamal M, O'Donovan A, Bernstein BE (2006) Genome-wide analysis of histone modifications by ChIP-on-chip. Methods 40: 365-369. doi:10.1016/j.ymeth.2006.07.032. PubMed: 17101450.
-
(2006)
Methods
, vol.40
, pp. 365-369
-
-
Huebert, D.J.1
Kamal, M.2
O'Donovan, A.3
Bernstein, B.E.4
-
35
-
-
36749089980
-
Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells
-
doi:10.1038/ncb1663. PubMed: 18037880
-
Stock JK, Giadrossi S, Casanova M, Brookes E, Vidal M et al. (2007) Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells. Nat Cell Biol 9: 1428-1435. doi:10.1038/ncb1663. PubMed: 18037880.
-
(2007)
Nat Cell Biol
, vol.9
, pp. 1428-1435
-
-
Stock, J.K.1
Giadrossi, S.2
Casanova, M.3
Brookes, E.4
Vidal, M.5
-
36
-
-
2942718698
-
Histone code modifications on pluripotential nuclei of reprogrammed somatic cells
-
doi:10.1128/MCB.24.13.5710-5720.2004. PubMed: 15216876
-
Kimura H, Tada M, Nakatsuji N, Tada T (2004) Histone code modifications on pluripotential nuclei of reprogrammed somatic cells. Mol Cell Biol 24: 5710-5720. doi:10.1128/MCB.24.13.5710-5720.2004. PubMed: 15216876.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 5710-5720
-
-
Kimura, H.1
Tada, M.2
Nakatsuji, N.3
Tada, T.4
-
37
-
-
82955207588
-
Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation
-
doi:10.1101/gad.179184.111. PubMed: 22156206
-
Wu H, Zhang Y (2011) Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation. Genes Dev 25: 2436-2452. doi:10.1101/gad.179184.111. PubMed: 22156206.
-
(2011)
Genes Dev
, vol.25
, pp. 2436-2452
-
-
Wu, H.1
Zhang, Y.2
-
38
-
-
33847055935
-
Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1
-
doi:10.1158/0008-5472.CAN-06-3123. PubMed: 17283125
-
Valinluck V, Sowers LC (2007) Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1. Cancer Res 67: 946-950. doi:10.1158/0008-5472.CAN-06-3123. PubMed: 17283125.
-
(2007)
Cancer Res
, vol.67
, pp. 946-950
-
-
Valinluck, V.1
Sowers, L.C.2
-
39
-
-
84860221291
-
Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation
-
doi:10.1093/nar/gks155. PubMed: 22362737
-
Hashimoto H, Liu Y, Upadhyay AK, Chang Y, Howerton SB et al. (2012) Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation. Nucleic Acids Res 40: 4841-4849. doi:10.1093/nar/gks155. PubMed: 22362737.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 4841-4849
-
-
Hashimoto, H.1
Liu, Y.2
Upadhyay, A.K.3
Chang, Y.4
Howerton, S.B.5
-
40
-
-
79959431845
-
Recognition of 5-hydroxymethylcytosine by the Uhrf1 SRA domain
-
doi:10.1371/journal.pone.0021306. PubMed: 21731699
-
Frauer C, Hoffmann T, Bultmann S, Casa V, Cardoso MC et al. (2011) Recognition of 5-hydroxymethylcytosine by the Uhrf1 SRA domain. PLOS ONE 6: e21306. doi:10.1371/journal.pone.0021306. PubMed: 21731699.
-
(2011)
PLOS ONE
, vol.6
-
-
Frauer, C.1
Hoffmann, T.2
Bultmann, S.3
Casa, V.4
Cardoso, M.C.5
-
41
-
-
80052495940
-
Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA
-
doi:10.1126/science.1210944. PubMed: 21817016
-
He YF, Li BZ, Li Z, Liu P, Wang Y et al. (2011) Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA. Science 333: 1303-1307. doi:10.1126/science.1210944. PubMed: 21817016.
-
(2011)
Science
, vol.333
, pp. 1303-1307
-
-
He, Y.F.1
Li, B.Z.2
Li, Z.3
Liu, P.4
Wang, Y.5
-
42
-
-
84876946045
-
Genome-wide analysis reveals TET- And TDG-dependent 5-methylcytosine oxidation dynamics
-
doi:10.1016/j.cell.2013.04.002. PubMed: 23602152
-
Shen L, Wu H, Diep D, Yamaguchi S, D'Alessio AC et al. (2013) Genome-wide analysis reveals TET- and TDG-dependent 5-methylcytosine oxidation dynamics. Cell 153: 692-706. doi:10.1016/j.cell.2013.04.002. PubMed: 23602152.
-
(2013)
Cell
, vol.153
, pp. 692-706
-
-
Shen, L.1
Wu, H.2
Diep, D.3
Yamaguchi, S.4
D'Alessio, A.C.5
-
43
-
-
77649267695
-
Dynamic changes in the human methylome during differentiation
-
doi:10.1101/gr.101907.109. PubMed: 20133333
-
Laurent L, Wong E, Li G, Huynh T, Tsirigos A et al. (2010) Dynamic changes in the human methylome during differentiation. Genome Res 20: 320-331. doi:10.1101/gr.101907.109. PubMed: 20133333.
-
(2010)
Genome Res
, vol.20
, pp. 320-331
-
-
Laurent, L.1
Wong, E.2
Li, G.3
Huynh, T.4
Tsirigos, A.5
-
44
-
-
79960401863
-
Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC)
-
doi:10.1101/gad.2059211. PubMed: 21764852
-
Lin C, Garrett AS, De Kumar B, Smith ER, Gogol M et al. (2011) Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC). Genes Dev 25: 1486-1498. doi:10.1101/gad.2059211. PubMed: 21764852.
-
(2011)
Genes Dev
, vol.25
, pp. 1486-1498
-
-
Lin, C.1
Garrett, A.S.2
De Kumar, B.3
Smith, E.R.4
Gogol, M.5
-
45
-
-
84874771985
-
Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives
-
doi:10.1016/j.cell.2013.02.004. PubMed: 23434322
-
Spruijt CG, Gnerlich F, Smits AH, Pfaffeneder T, Jansen PW et al. (2013) Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives. Cell 152: 1146-1159. doi:10.1016/j.cell.2013.02.004. PubMed: 23434322.
-
(2013)
Cell
, vol.152
, pp. 1146-1159
-
-
Spruijt, C.G.1
Gnerlich, F.2
Smits, A.H.3
Pfaffeneder, T.4
Jansen, P.W.5
-
46
-
-
84872770694
-
Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine
-
doi:10.1126/science.1229277. PubMed: 23223451
-
Hackett JA, Sengupta R, Zylicz JJ, Murakami K, Lee C et al. (2013) Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine. Science 339: 448-452. doi:10.1126/science.1229277. PubMed: 23223451.
-
(2013)
Science
, vol.339
, pp. 448-452
-
-
Hackett, J.A.1
Sengupta, R.2
Zylicz, J.J.3
Murakami, K.4
Lee, C.5
-
47
-
-
80054097425
-
Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos
-
doi:10.1126/science.1212483. PubMed: 21940858
-
Inoue A, Zhang Y (2011) Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos. Science 334: 194. doi:10.1126/science.1212483. PubMed: 21940858.
-
(2011)
Science
, vol.334
, pp. 194
-
-
Inoue, A.1
Zhang, Y.2
-
48
-
-
4744372577
-
Severe global DNA hypomethylation blocks differentiation and induces histone hyperacetylation in embryonic stem cells
-
doi:10.1128/MCB.24.20.8862-8871.2004. PubMed: 15456861
-
Jackson M, Krassowska A, Gilbert N, Chevassut T, Forrester L et al. (2004) Severe global DNA hypomethylation blocks differentiation and induces histone hyperacetylation in embryonic stem cells. Mol Cell Biol 24: 8862-8871. doi:10.1128/MCB.24.20.8862-8871.2004. PubMed: 15456861.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 8862-8871
-
-
Jackson, M.1
Krassowska, A.2
Gilbert, N.3
Chevassut, T.4
Forrester, L.5
-
49
-
-
33646353209
-
Distinct DNA methylation activity of DNA methyltransferases Dnmt3a and Dnmt3b towards the DNA in nucleosomes
-
doi:10.1093/jb/mvj044. PubMed: 16567415
-
Takeshima H, Suetake I, Shimahara H, Tate S, Ura K et al. (2006) Distinct DNA methylation activity of DNA methyltransferases Dnmt3a and Dnmt3b towards the DNA in nucleosomes. J Biochem 139: 503-515. doi:10.1093/jb/mvj044. PubMed: 16567415.
-
(2006)
J Biochem
, vol.139
, pp. 503-515
-
-
Takeshima, H.1
Suetake, I.2
Shimahara, H.3
Tate, S.4
Ura, K.5
-
50
-
-
53149096921
-
Mouse Dnmt3a preferentially methylates linker DNA, and is inhibited by histone H1
-
doi:10.1016/j.jmb.2008.03.001. PubMed: 18823905
-
Takeshima H, Suetake I, Tajima S (2008) Mouse Dnmt3a preferentially methylates linker DNA, and is inhibited by histone H1. J Mol Biol 383: 810-821. doi:10.1016/j.jmb.2008.03.001. PubMed: 18823905.
-
(2008)
J Mol Biol
, vol.383
, pp. 810-821
-
-
Takeshima, H.1
Suetake, I.2
Tajima, S.3
-
51
-
-
84891478098
-
Chromatin organization and global regulation of Hox gene clusters
-
PubMed: 23650639
-
Montavon T, Duboule D (2013) Chromatin organization and global regulation of Hox gene clusters. Philos Trans R Soc Lond B Biol Sci 368: 20120367. PubMed: 23650639.
-
(2013)
Philos Trans R Soc Lond B Biol Sci
, vol.368
, pp. 20120367
-
-
Montavon, T.1
Duboule, D.2
-
52
-
-
84875236884
-
Clustered protocadherins and neuronal diversity
-
Hirayama T, Yagi T (2013) Clustered protocadherins and neuronal diversity. Prog Mol Biol. Transl Sci 116: 145-167.
-
(2013)
Prog Mol Biol. Transl Sci
, vol.116
, pp. 145-167
-
-
Hirayama, T.1
Yagi, T.2
|