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Volumn 8, Issue 12, 2013, Pages

Cell cycle-dependent turnover of 5-hydroxymethyl cytosine in mouse embryonic stem cells

Author keywords

[No Author keywords available]

Indexed keywords

5 HYDROXYMETHYLCYTOSINE; 5 METHYLCYTOSINE; DNA METHYLTRANSFERASE 1; DNA METHYLTRANSFERASE 3A; DNA METHYLTRANSFERASE 3B; RING FINGER PROTEIN; UHRF1 PROTEIN; UNCLASSIFIED DRUG; 5-HYDROXYMETHYLCYTOSINE; CYTOSINE; DNA; DNA (CYTOSINE 5) METHYLTRANSFERASE; DNA (CYTOSINE-5-)-METHYLTRANSFERASE 1; NUCLEAR PROTEIN; UHRF1 PROTEIN, MOUSE;

EID: 84892415010     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0082961     Document Type: Article
Times cited : (68)

References (52)
  • 1
    • 0033615717 scopus 로고    scopus 로고
    • DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development
    • doi:10.1016/S0092-8674(00)81656-6. PubMed: 10555141
    • Okano M, Bell DW, Haber DA, Li E (1999) DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell 99: 247-257. doi:10.1016/S0092-8674(00)81656-6. PubMed: 10555141.
    • (1999) Cell , vol.99 , pp. 247-257
    • Okano, M.1    Bell, D.W.2    Haber, D.A.3    Li, E.4
  • 2
    • 0035444277 scopus 로고    scopus 로고
    • Enzymatic properties of de novo-type mouse DNA (cytosine-5) methyltransferases
    • doi:10.1093/nar/29.17.3506. PubMed: 11522819
    • Aoki A, Suetake I, Miyagawa J, Fujio T, Chijiwa T et al. (2001)Enzymatic properties of de novo-type mouse DNA (cytosine-5) methyltransferases. Nucleic Acids Res 29: 3506-3512. doi:10.1093/nar/29.17.3506. PubMed: 11522819.
    • (2001) Nucleic Acids Res , vol.29 , pp. 3506-3512
    • Aoki, A.1    Suetake, I.2    Miyagawa, J.3    Fujio, T.4    Chijiwa, T.5
  • 3
    • 0042311434 scopus 로고    scopus 로고
    • Distinct enzymatic properties of recombinant mouse DNA methyltransferases Dnmt3a and Dnmt3b
    • doi:10.1093/jb/mvg095. PubMed: 12869530
    • Suetake I, Miyazaki J, Murakami C, Takeshima T, Tajima S (2003) Distinct enzymatic properties of recombinant mouse DNA methyltransferases Dnmt3a and Dnmt3b. J Biochem 133: 737-744. doi:10.1093/jb/mvg095. PubMed: 12869530.
    • (2003) J Biochem , vol.133 , pp. 737-744
    • Suetake, I.1    Miyazaki, J.2    Murakami, C.3    Takeshima, T.4    Tajima, S.5
  • 4
    • 0036803302 scopus 로고    scopus 로고
    • Stage- and cell-specific expression of Dnmt3a and Dnmt3b during embryogenesis
    • doi:10.1016/S0925-4773(02)00242-3. PubMed: 12351185
    • Watanabe D, Suetake I, Tada T, Tajima S (2002) Stage- and cell-specific expression of Dnmt3a and Dnmt3b during embryogenesis. Mech Dev 118: 187-190. doi:10.1016/S0925-4773(02)00242-3. PubMed: 12351185.
    • (2002) Mech Dev , vol.118 , pp. 187-190
    • Watanabe, D.1    Suetake, I.2    Tada, T.3    Tajima, S.4
  • 5
    • 10244242675 scopus 로고    scopus 로고
    • Co-expression of de novo DNA methyltransferases Dnmt3a2 and Dnmt3L in gonocytes of mouse embryos
    • doi:10.1016/j.modgep.2004.07.011. PubMed: 15567719
    • Sakai Y, Suetake I, Shinozaki F, Yamashina S, Tajima S (2004) Co-expression of de novo DNA methyltransferases Dnmt3a2 and Dnmt3L in gonocytes of mouse embryos. Gene Expr Patterns 5: 231-237. doi:10.1016/j.modgep.2004.07. 011. PubMed: 15567719.
    • (2004) Gene Expr Patterns , vol.5 , pp. 231-237
    • Sakai, Y.1    Suetake, I.2    Shinozaki, F.3    Yamashina, S.4    Tajima, S.5
  • 6
    • 0026708177 scopus 로고
    • Targeted mutation of the DNA methyltransferase gene results in embryonic lethality
    • doi:10.1016/0092-8674(92)90611-F. PubMed: 1606615
    • Li E, Bestor TH, Jaenisch R (1992) Targeted mutation of the DNA methyltransferase gene results in embryonic lethality. Cell 69: 915-926. doi:10.1016/0092-8674(92)90611-F. PubMed: 1606615.
    • (1992) Cell , vol.69 , pp. 915-926
    • Li, E.1    Bestor, T.H.2    Jaenisch, R.3
  • 7
    • 12844278737 scopus 로고    scopus 로고
    • Processive methylation of hemimethylated CpG sites by mouse Dnmt1 DNA methyltransferase
    • PubMed: 15509558
    • Vilkaitis G, Suetake I, Klimasauskas S, Tajima S (2005) Processive methylation of hemimethylated CpG sites by mouse Dnmt1 DNA methyltransferase. J Biol Chem 280: 64-72. PubMed: 15509558.
    • (2005) J Biol Chem , vol.280 , pp. 64-72
    • Vilkaitis, G.1    Suetake, I.2    Klimasauskas, S.3    Tajima, S.4
  • 8
    • 36849072573 scopus 로고    scopus 로고
    • The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA
    • doi:10.1038/nature06397. PubMed: 17994007
    • Sharif J, Muto M, Takebayashi S, Suetake I, Iwamatsu A et al. (2007) The SRA protein Np95 mediates epigenetic inheritance by recruiting Dnmt1 to methylated DNA. Nature 450: 908-912. doi:10.1038/nature06397. PubMed: 17994007.
    • (2007) Nature , vol.450 , pp. 908-912
    • Sharif, J.1    Muto, M.2    Takebayashi, S.3    Suetake, I.4    Iwamatsu, A.5
  • 9
    • 53649097070 scopus 로고    scopus 로고
    • Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism
    • doi:10.1038/nature07249. PubMed: 18772891
    • Arita K, Ariyoshi M, Tochio H, Nakamura Y, Shirakawa M (2008) Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism. Nature 455: 818-821. doi:10.1038/nature07249. PubMed: 18772891.
    • (2008) Nature , vol.455 , pp. 818-821
    • Arita, K.1    Ariyoshi, M.2    Tochio, H.3    Nakamura, Y.4    Shirakawa, M.5
  • 10
    • 53649088595 scopus 로고    scopus 로고
    • Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1
    • doi:10.1038/nature07273. PubMed: 18772889
    • Avvakumov GV, Walker JR, Xue S, Li Y, Duan S et al. (2008) Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1. Nature 455: 822-825. doi:10.1038/nature07273. PubMed: 18772889.
    • (2008) Nature , vol.455 , pp. 822-825
    • Avvakumov, G.V.1    Walker, J.R.2    Xue, S.3    Li, Y.4    Duan, S.5
  • 11
    • 53649089723 scopus 로고    scopus 로고
    • The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix
    • doi:10.1038/nature07280. PubMed: 18772888
    • Hashimoto H, Horton JR, Zhang H, Bostick M, Jacobsen SE et al. (2008) The SRA domain of UHRF1 flips 5-methylcytosine out of the DNA helix. Nature 455: 826-829. doi:10.1038/nature07280. PubMed: 18772888.
    • (2008) Nature , vol.455 , pp. 826-829
    • Hashimoto, H.1    Horton, J.R.2    Zhang, H.3    Bostick, M.4    Jacobsen, S.E.5
  • 12
    • 45449114804 scopus 로고    scopus 로고
    • The colorful history of active DNA demethylation
    • doi:10.1016/j.cell.2008.06.009. PubMed: 18585349
    • Ooi SK, Bestor TH (2008) The colorful history of active DNA demethylation. Cell 133: 1145-1148. doi:10.1016/j.cell.2008.06.009. PubMed: 18585349.
    • (2008) Cell , vol.133 , pp. 1145-1148
    • Ooi, S.K.1    Bestor, T.H.2
  • 13
    • 77956095231 scopus 로고    scopus 로고
    • Active DNA demethylation: Many roads lead to Rome
    • doi:10.1038/nrm2950. PubMed: 20683471
    • Wu SC, Zhang Y (2010) Active DNA demethylation: many roads lead to Rome. Nat Rev Mol Cell Biol 11: 607-620. doi:10.1038/nrm2950. PubMed: 20683471.
    • (2010) Nat Rev Mol Cell Biol , vol.11 , pp. 607-620
    • Wu, S.C.1    Zhang, Y.2
  • 14
    • 66149146320 scopus 로고    scopus 로고
    • Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1
    • doi:10.1126/science.1170116. PubMed: 19372391
    • Tahiliani M, Koh KP, Shen Y, Pastor WA, Bandukwala H et al. (2009) Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1. Science 324: 930-935. doi:10.1126/science.1170116. PubMed: 19372391.
    • (2009) Science , vol.324 , pp. 930-935
    • Tahiliani, M.1    Koh, K.P.2    Shen, Y.3    Pastor, W.A.4    Bandukwala, H.5
  • 15
    • 77956189495 scopus 로고    scopus 로고
    • Roles of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification
    • doi:10.1038/nature09303. PubMed: 20639862
    • Ito S, D'Alessio AC, Taranova OV, Hong K, Sowers LC et al. (2010) Roles of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification. Nature 466: 1129-1133. doi:10.1038/nature09303. PubMed: 20639862.
    • (2010) Nature , vol.466 , pp. 1129-1133
    • Ito, S.1    D'Alessio, A.C.2    Taranova, O.V.3    Hong, K.4    Sowers, L.C.5
  • 16
    • 79956323623 scopus 로고    scopus 로고
    • Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation
    • doi:10.1038/nature10008. PubMed: 21460836
    • Ficz G, Branco MR, Seisenberger S, Santos F, Krueger F et al. (2011) Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation. Nature 473: 398-402. doi:10.1038/nature10008. PubMed: 21460836.
    • (2011) Nature , vol.473 , pp. 398-402
    • Ficz, G.1    Branco, M.R.2    Seisenberger, S.3    Santos, F.4    Krueger, F.5
  • 17
    • 79956308473 scopus 로고    scopus 로고
    • Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells
    • doi:10.1038/nature10102. PubMed: 21552279
    • Pastor WA, Pape UJ, Huang Y, Henderson HR, Lister R et al. (2011) Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells. Nature 473: 394-397. doi:10.1038/nature10102. PubMed: 21552279.
    • (2011) Nature , vol.473 , pp. 394-397
    • Pastor, W.A.1    Pape, U.J.2    Huang, Y.3    Henderson, H.R.4    Lister, R.5
  • 18
    • 79956302047 scopus 로고    scopus 로고
    • TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity
    • doi:10.1038/nature10066. PubMed: 21490601
    • Williams K, Christensen J, Pedersen MT, Johansen JV, Cloos PA et al. (2011) TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity. Nature 473: 343-348. doi:10.1038/nature10066. PubMed: 21490601.
    • (2011) Nature , vol.473 , pp. 343-348
    • Williams, K.1    Christensen, J.2    Pedersen, M.T.3    Johansen, J.V.4    Cloos, P.A.5
  • 19
    • 79954457998 scopus 로고    scopus 로고
    • Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells
    • doi:10.1101/gad.2036011. PubMed: 21460036
    • Wu H, D'Alessio AC, Ito S, Wang Z, Cui K et al. (2011) Genome-wide analysis of 5-hydroxymethylcytosine distribution reveals its dual function in transcriptional regulation in mouse embryonic stem cells. Genes Dev 25: 679-684. doi:10.1101/gad.2036011. PubMed: 21460036.
    • (2011) Genes Dev , vol.25 , pp. 679-684
    • Wu, H.1    D'Alessio, A.C.2    Ito, S.3    Wang, Z.4    Cui, K.5
  • 20
    • 79955948324 scopus 로고    scopus 로고
    • Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells
    • doi:10.1016/j.molcel.2011.04.005. PubMed: 21514197
    • Xu Y, Wu F, Tan L, Kong L, Xiong L et al. (2011) Genome-wide regulation of 5hmC, 5mC, and gene expression by Tet1 hydroxylase in mouse embryonic stem cells. Mol Cell 42: 451-464. doi:10.1016/j.molcel.2011.04.005. PubMed: 21514197.
    • (2011) Mol Cell , vol.42 , pp. 451-464
    • Xu, Y.1    Wu, F.2    Tan, L.3    Kong, L.4    Xiong, L.5
  • 21
    • 79956292024 scopus 로고    scopus 로고
    • Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells
    • doi:10.1038/nature09934. PubMed: 21451524
    • Wu H, D'Alessio AC, Ito S, Xia K, Wang Z et al. (2011) Dual functions of Tet1 in transcriptional regulation in mouse embryonic stem cells. Nature 473: 389-393. doi:10.1038/nature09934. PubMed: 21451524.
    • (2011) Nature , vol.473 , pp. 389-393
    • Wu, H.1    D'Alessio, A.C.2    Ito, S.3    Xia, K.4    Wang, Z.5
  • 22
    • 80053348585 scopus 로고    scopus 로고
    • The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes
    • doi:10.1038/nature10443. PubMed: 21892189
    • Gu TP, Guo F, Yang H, Wu HP, Xu GF et al. (2011) The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes. Nature 477: 606-610. doi:10.1038/nature10443. PubMed: 21892189.
    • (2011) Nature , vol.477 , pp. 606-610
    • Gu, T.P.1    Guo, F.2    Yang, H.3    Wu, H.P.4    Xu, G.F.5
  • 23
    • 79952713567 scopus 로고    scopus 로고
    • 5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming
    • doi:10.1038/ncomms1240. PubMed: 21407207
    • Wossidlo M, Nakamura T, Lepikhov K, Marques CJ, Zakhartchenko V et al. (2011) 5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming. Nat Commun 2: 241. doi:10.1038/ncomms1240. PubMed: 21407207.
    • (2011) Nat Commun , vol.2 , pp. 241
    • Wossidlo, M.1    Nakamura, T.2    Lepikhov, K.3    Marques, C.J.4    Zakhartchenko, V.5
  • 24
    • 0029803192 scopus 로고    scopus 로고
    • De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells
    • PubMed: 8898232
    • Lei H, Oh SP, Okano M, Jüttermann R, Goss KA et al. (1996) De novo DNA cytosine methyltransferase activities in mouse embryonic stem cells. Development 122: 3195-3205. PubMed: 8898232.
    • (1996) Development , vol.122 , pp. 3195-3205
    • Lei, H.1    Oh, S.P.2    Okano, M.3    Jüttermann, R.4    Goss, K.A.5
  • 25
    • 33745270104 scopus 로고    scopus 로고
    • Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b
    • doi:10.1111/j.1365-2443.2006.00984.x. PubMed: 16824199
    • Tsumura A, Hayakawa T, Kumaki Y, Takebayashi S, Sakaue M et al. (2006) Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b. Genes Cells 11: 805-814. doi:10.1111/j.1365-2443.2006.00984.x. PubMed: 16824199.
    • (2006) Genes Cells , vol.11 , pp. 805-814
    • Tsumura, A.1    Hayakawa, T.2    Kumaki, Y.3    Takebayashi, S.4    Sakaue, M.5
  • 26
    • 21344451374 scopus 로고    scopus 로고
    • Cell cycle synchronization of embryonic stem cells: Effect of serum deprivation on the differentiation of embryonic bodies in vitro
    • doi:10.1016/j.bbrc.2005.05.200. PubMed: 15975550
    • Zhang E, Li X, Zhang S, Chen L, Zheng X (2005) Cell cycle synchronization of embryonic stem cells: effect of serum deprivation on the differentiation of embryonic bodies in vitro. Biochem Biophys Res Commun 333: 1171-1177. doi:10.1016/j.bbrc.2005.05.200. PubMed: 15975550.
    • (2005) Biochem Biophys Res Commun , vol.333 , pp. 1171-1177
    • Zhang, E.1    Li, X.2    Zhang, S.3    Chen, L.4    Zheng, X.5
  • 27
    • 0031749011 scopus 로고    scopus 로고
    • Nuclear localization of cyclin B1 controls mitotic entry after DNA damage
    • doi:10.1083/jcb.141.4.875. PubMed: 9585407
    • Jin P, Hardy S, Morgan DO (1998) Nuclear localization of cyclin B1 controls mitotic entry after DNA damage. J Cell Biol 141: 875-885. doi:10.1083/jcb.141.4.875. PubMed: 9585407.
    • (1998) J Cell Biol , vol.141 , pp. 875-885
    • Jin, P.1    Hardy, S.2    Morgan, D.O.3
  • 28
    • 79959368232 scopus 로고    scopus 로고
    • Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1)
    • doi:10.1073/pnas.1019629108. PubMed: 21518897
    • Takeshita K, Suetake I, Yamashita E, Suga M, Narita H et al. (2011) Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc Natl Acad Sci U S A 108: 9055-9059. doi:10.1073/pnas.1019629108. PubMed: 21518897.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 9055-9059
    • Takeshita, K.1    Suetake, I.2    Yamashita, E.3    Suga, M.4    Narita, H.5
  • 31
    • 78651280460 scopus 로고    scopus 로고
    • Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine
    • doi:10.1038/nbt.1732. PubMed: 21151123
    • Song CX, Szulwach KE, Fu Y, Dai Q, Yi C et al. (2011) Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine. Nat Biotechnol 29: 68-72. doi:10.1038/nbt.1732. PubMed: 21151123.
    • (2011) Nat Biotechnol , vol.29 , pp. 68-72
    • Song, C.X.1    Szulwach, K.E.2    Fu, Y.3    Dai, Q.4    Yi, C.5
  • 32
    • 84864326005 scopus 로고    scopus 로고
    • Genome-wide analysis of DNA methylation and expression of microRNAs in breast cancer cells
    • doi:10.3390/ijms13078259. PubMed: 22942701
    • Morita S, Takahashi RU, Yamashita R, Toyoda A, Horii T et al. (2012) Genome-wide analysis of DNA methylation and expression of microRNAs in breast cancer cells. Int J Mol Sci 13: 8259-8272. doi:10.3390/ijms13078259. PubMed: 22942701.
    • (2012) Int J Mol Sci , vol.13 , pp. 8259-8272
    • Morita, S.1    Takahashi, R.U.2    Yamashita, R.3    Toyoda, A.4    Horii, T.5
  • 33
    • 0035906936 scopus 로고    scopus 로고
    • Solution structure of the methyl-CpG binding domain of human MBD1 in a complex with methylated DNA
    • doi:10.1016/S0092-8674(01)00324-5. PubMed: 11371345
    • Ohki I, Shimotake N, Fujita N, Jee J, Ikegami T et al. (2001) Solution structure of the methyl-CpG binding domain of human MBD1 in a complex with methylated DNA. Cell 105: 487-497. doi:10.1016/S0092-8674(01)00324-5. PubMed: 11371345.
    • (2001) Cell , vol.105 , pp. 487-497
    • Ohki, I.1    Shimotake, N.2    Fujita, N.3    Jee, J.4    Ikegami, T.5
  • 34
    • 33750733285 scopus 로고    scopus 로고
    • Genome-wide analysis of histone modifications by ChIP-on-chip
    • doi:10.1016/j.ymeth.2006.07.032. PubMed: 17101450
    • Huebert DJ, Kamal M, O'Donovan A, Bernstein BE (2006) Genome-wide analysis of histone modifications by ChIP-on-chip. Methods 40: 365-369. doi:10.1016/j.ymeth.2006.07.032. PubMed: 17101450.
    • (2006) Methods , vol.40 , pp. 365-369
    • Huebert, D.J.1    Kamal, M.2    O'Donovan, A.3    Bernstein, B.E.4
  • 35
    • 36749089980 scopus 로고    scopus 로고
    • Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells
    • doi:10.1038/ncb1663. PubMed: 18037880
    • Stock JK, Giadrossi S, Casanova M, Brookes E, Vidal M et al. (2007) Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells. Nat Cell Biol 9: 1428-1435. doi:10.1038/ncb1663. PubMed: 18037880.
    • (2007) Nat Cell Biol , vol.9 , pp. 1428-1435
    • Stock, J.K.1    Giadrossi, S.2    Casanova, M.3    Brookes, E.4    Vidal, M.5
  • 36
    • 2942718698 scopus 로고    scopus 로고
    • Histone code modifications on pluripotential nuclei of reprogrammed somatic cells
    • doi:10.1128/MCB.24.13.5710-5720.2004. PubMed: 15216876
    • Kimura H, Tada M, Nakatsuji N, Tada T (2004) Histone code modifications on pluripotential nuclei of reprogrammed somatic cells. Mol Cell Biol 24: 5710-5720. doi:10.1128/MCB.24.13.5710-5720.2004. PubMed: 15216876.
    • (2004) Mol Cell Biol , vol.24 , pp. 5710-5720
    • Kimura, H.1    Tada, M.2    Nakatsuji, N.3    Tada, T.4
  • 37
    • 82955207588 scopus 로고    scopus 로고
    • Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation
    • doi:10.1101/gad.179184.111. PubMed: 22156206
    • Wu H, Zhang Y (2011) Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation. Genes Dev 25: 2436-2452. doi:10.1101/gad.179184.111. PubMed: 22156206.
    • (2011) Genes Dev , vol.25 , pp. 2436-2452
    • Wu, H.1    Zhang, Y.2
  • 38
    • 33847055935 scopus 로고    scopus 로고
    • Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1
    • doi:10.1158/0008-5472.CAN-06-3123. PubMed: 17283125
    • Valinluck V, Sowers LC (2007) Endogenous cytosine damage products alter the site selectivity of human DNA maintenance methyltransferase DNMT1. Cancer Res 67: 946-950. doi:10.1158/0008-5472.CAN-06-3123. PubMed: 17283125.
    • (2007) Cancer Res , vol.67 , pp. 946-950
    • Valinluck, V.1    Sowers, L.C.2
  • 39
    • 84860221291 scopus 로고    scopus 로고
    • Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation
    • doi:10.1093/nar/gks155. PubMed: 22362737
    • Hashimoto H, Liu Y, Upadhyay AK, Chang Y, Howerton SB et al. (2012) Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation. Nucleic Acids Res 40: 4841-4849. doi:10.1093/nar/gks155. PubMed: 22362737.
    • (2012) Nucleic Acids Res , vol.40 , pp. 4841-4849
    • Hashimoto, H.1    Liu, Y.2    Upadhyay, A.K.3    Chang, Y.4    Howerton, S.B.5
  • 40
    • 79959431845 scopus 로고    scopus 로고
    • Recognition of 5-hydroxymethylcytosine by the Uhrf1 SRA domain
    • doi:10.1371/journal.pone.0021306. PubMed: 21731699
    • Frauer C, Hoffmann T, Bultmann S, Casa V, Cardoso MC et al. (2011) Recognition of 5-hydroxymethylcytosine by the Uhrf1 SRA domain. PLOS ONE 6: e21306. doi:10.1371/journal.pone.0021306. PubMed: 21731699.
    • (2011) PLOS ONE , vol.6
    • Frauer, C.1    Hoffmann, T.2    Bultmann, S.3    Casa, V.4    Cardoso, M.C.5
  • 41
    • 80052495940 scopus 로고    scopus 로고
    • Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA
    • doi:10.1126/science.1210944. PubMed: 21817016
    • He YF, Li BZ, Li Z, Liu P, Wang Y et al. (2011) Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA. Science 333: 1303-1307. doi:10.1126/science.1210944. PubMed: 21817016.
    • (2011) Science , vol.333 , pp. 1303-1307
    • He, Y.F.1    Li, B.Z.2    Li, Z.3    Liu, P.4    Wang, Y.5
  • 42
    • 84876946045 scopus 로고    scopus 로고
    • Genome-wide analysis reveals TET- And TDG-dependent 5-methylcytosine oxidation dynamics
    • doi:10.1016/j.cell.2013.04.002. PubMed: 23602152
    • Shen L, Wu H, Diep D, Yamaguchi S, D'Alessio AC et al. (2013) Genome-wide analysis reveals TET- and TDG-dependent 5-methylcytosine oxidation dynamics. Cell 153: 692-706. doi:10.1016/j.cell.2013.04.002. PubMed: 23602152.
    • (2013) Cell , vol.153 , pp. 692-706
    • Shen, L.1    Wu, H.2    Diep, D.3    Yamaguchi, S.4    D'Alessio, A.C.5
  • 43
    • 77649267695 scopus 로고    scopus 로고
    • Dynamic changes in the human methylome during differentiation
    • doi:10.1101/gr.101907.109. PubMed: 20133333
    • Laurent L, Wong E, Li G, Huynh T, Tsirigos A et al. (2010) Dynamic changes in the human methylome during differentiation. Genome Res 20: 320-331. doi:10.1101/gr.101907.109. PubMed: 20133333.
    • (2010) Genome Res , vol.20 , pp. 320-331
    • Laurent, L.1    Wong, E.2    Li, G.3    Huynh, T.4    Tsirigos, A.5
  • 44
    • 79960401863 scopus 로고    scopus 로고
    • Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC)
    • doi:10.1101/gad.2059211. PubMed: 21764852
    • Lin C, Garrett AS, De Kumar B, Smith ER, Gogol M et al. (2011) Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC). Genes Dev 25: 1486-1498. doi:10.1101/gad.2059211. PubMed: 21764852.
    • (2011) Genes Dev , vol.25 , pp. 1486-1498
    • Lin, C.1    Garrett, A.S.2    De Kumar, B.3    Smith, E.R.4    Gogol, M.5
  • 45
    • 84874771985 scopus 로고    scopus 로고
    • Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives
    • doi:10.1016/j.cell.2013.02.004. PubMed: 23434322
    • Spruijt CG, Gnerlich F, Smits AH, Pfaffeneder T, Jansen PW et al. (2013) Dynamic readers for 5-(hydroxy)methylcytosine and its oxidized derivatives. Cell 152: 1146-1159. doi:10.1016/j.cell.2013.02.004. PubMed: 23434322.
    • (2013) Cell , vol.152 , pp. 1146-1159
    • Spruijt, C.G.1    Gnerlich, F.2    Smits, A.H.3    Pfaffeneder, T.4    Jansen, P.W.5
  • 46
    • 84872770694 scopus 로고    scopus 로고
    • Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine
    • doi:10.1126/science.1229277. PubMed: 23223451
    • Hackett JA, Sengupta R, Zylicz JJ, Murakami K, Lee C et al. (2013) Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine. Science 339: 448-452. doi:10.1126/science.1229277. PubMed: 23223451.
    • (2013) Science , vol.339 , pp. 448-452
    • Hackett, J.A.1    Sengupta, R.2    Zylicz, J.J.3    Murakami, K.4    Lee, C.5
  • 47
    • 80054097425 scopus 로고    scopus 로고
    • Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos
    • doi:10.1126/science.1212483. PubMed: 21940858
    • Inoue A, Zhang Y (2011) Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos. Science 334: 194. doi:10.1126/science.1212483. PubMed: 21940858.
    • (2011) Science , vol.334 , pp. 194
    • Inoue, A.1    Zhang, Y.2
  • 48
    • 4744372577 scopus 로고    scopus 로고
    • Severe global DNA hypomethylation blocks differentiation and induces histone hyperacetylation in embryonic stem cells
    • doi:10.1128/MCB.24.20.8862-8871.2004. PubMed: 15456861
    • Jackson M, Krassowska A, Gilbert N, Chevassut T, Forrester L et al. (2004) Severe global DNA hypomethylation blocks differentiation and induces histone hyperacetylation in embryonic stem cells. Mol Cell Biol 24: 8862-8871. doi:10.1128/MCB.24.20.8862-8871.2004. PubMed: 15456861.
    • (2004) Mol Cell Biol , vol.24 , pp. 8862-8871
    • Jackson, M.1    Krassowska, A.2    Gilbert, N.3    Chevassut, T.4    Forrester, L.5
  • 49
    • 33646353209 scopus 로고    scopus 로고
    • Distinct DNA methylation activity of DNA methyltransferases Dnmt3a and Dnmt3b towards the DNA in nucleosomes
    • doi:10.1093/jb/mvj044. PubMed: 16567415
    • Takeshima H, Suetake I, Shimahara H, Tate S, Ura K et al. (2006) Distinct DNA methylation activity of DNA methyltransferases Dnmt3a and Dnmt3b towards the DNA in nucleosomes. J Biochem 139: 503-515. doi:10.1093/jb/mvj044. PubMed: 16567415.
    • (2006) J Biochem , vol.139 , pp. 503-515
    • Takeshima, H.1    Suetake, I.2    Shimahara, H.3    Tate, S.4    Ura, K.5
  • 50
    • 53149096921 scopus 로고    scopus 로고
    • Mouse Dnmt3a preferentially methylates linker DNA, and is inhibited by histone H1
    • doi:10.1016/j.jmb.2008.03.001. PubMed: 18823905
    • Takeshima H, Suetake I, Tajima S (2008) Mouse Dnmt3a preferentially methylates linker DNA, and is inhibited by histone H1. J Mol Biol 383: 810-821. doi:10.1016/j.jmb.2008.03.001. PubMed: 18823905.
    • (2008) J Mol Biol , vol.383 , pp. 810-821
    • Takeshima, H.1    Suetake, I.2    Tajima, S.3
  • 51
    • 84891478098 scopus 로고    scopus 로고
    • Chromatin organization and global regulation of Hox gene clusters
    • PubMed: 23650639
    • Montavon T, Duboule D (2013) Chromatin organization and global regulation of Hox gene clusters. Philos Trans R Soc Lond B Biol Sci 368: 20120367. PubMed: 23650639.
    • (2013) Philos Trans R Soc Lond B Biol Sci , vol.368 , pp. 20120367
    • Montavon, T.1    Duboule, D.2
  • 52
    • 84875236884 scopus 로고    scopus 로고
    • Clustered protocadherins and neuronal diversity
    • Hirayama T, Yagi T (2013) Clustered protocadherins and neuronal diversity. Prog Mol Biol. Transl Sci 116: 145-167.
    • (2013) Prog Mol Biol. Transl Sci , vol.116 , pp. 145-167
    • Hirayama, T.1    Yagi, T.2


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