-
1
-
-
0036839273
-
Virological features and clinical manifestations associated with human metapneumovirus: A new paramyxovirus responsible for acute respiratory-tract infections in all age groups
-
doi:10.1086/344319. PubMed: 12402203
-
Boivin G, Abed Y, Pelletier G, Ruel L, Moisan D et al. (2002) Virological features and clinical manifestations associated with human metapneumovirus: a new paramyxovirus responsible for acute respiratory-tract infections in all age groups. J Infect Dis 186: 1330-1334. doi:10.1086/344319. PubMed: 12402203.
-
(2002)
J Infect Dis
, vol.186
, pp. 1330-1334
-
-
Boivin, G.1
Abed, Y.2
Pelletier, G.3
Ruel, L.4
Moisan, D.5
-
2
-
-
34247249922
-
Respiratory tract infection due to human metapneumovirus among elderly patients
-
doi:10.1086/513295. PubMed: 17407032
-
van den Hoogen BG (2007) Respiratory tract infection due to human metapneumovirus among elderly patients. Clin Infect Dis 44: 1159-1160. doi:10.1086/513295. PubMed: 17407032.
-
(2007)
Clin Infect Dis
, vol.44
, pp. 1159-1160
-
-
Van Den Hoogen, B.G.1
-
3
-
-
0346874140
-
Prevalence and clinical symptoms of human metapneumovirus infection in hospitalized patients
-
doi:10.1086/379200. PubMed: 14624384
-
van den Hoogen BG, van Doornum GJ, Fockens JC, Cornelissen JJ, Beyer WE et al. (2003) Prevalence and clinical symptoms of human metapneumovirus infection in hospitalized patients. J Infect Dis 188: 1571-1577. doi:10.1086/379200. PubMed: 14624384.
-
(2003)
J Infect Dis
, vol.188
, pp. 1571-1577
-
-
Van Den Hoogen, B.G.1
Van Doornum, G.J.2
Fockens, J.C.3
Cornelissen, J.J.4
Beyer, W.E.5
-
4
-
-
1642499234
-
Human metapneumovirus and lower respiratory tract disease in otherwise healthy infants and children
-
doi:10.1056/NEJMoa025472. PubMed: 14749452
-
Williams JV, Harris PA, Tollefson SJ, Halburnt-Rush LL, Pingsterhaus JM et al. (2004) Human metapneumovirus and lower respiratory tract disease in otherwise healthy infants and children. N Engl J Med 350: 443-450. doi:10.1056/NEJMoa025472. PubMed: 14749452.
-
(2004)
N Engl J Med
, vol.350
, pp. 443-450
-
-
Williams, J.V.1
Harris, P.A.2
Tollefson, S.J.3
Halburnt-Rush, L.L.4
Pingsterhaus, J.M.5
-
5
-
-
2442641889
-
Human Metapneumovirus as a causative agent of acute bronchiolitis in infants
-
doi:10.1016/j.jcv.2003.12.012. PubMed: 15135747
-
Xepapadaki P, Psarras S, Bossios A, Tsolia M, Gourgiotis D et al. (2004) Human Metapneumovirus as a causative agent of acute bronchiolitis in infants. J Clin Virol 30: 267-270. doi:10.1016/j.jcv.2003.12.012. PubMed: 15135747.
-
(2004)
J Clin Virol
, vol.30
, pp. 267-270
-
-
Xepapadaki, P.1
Psarras, S.2
Bossios, A.3
Tsolia, M.4
Gourgiotis, D.5
-
6
-
-
0036057937
-
Analysis of the genomic sequence of a human metapneumovirus
-
doi:10.1006/viro.2001.1355. PubMed: 12033771
-
van den Hoogen BG, Bestebroer TM, Osterhaus AD, Fouchier RA (2002) Analysis of the genomic sequence of a human metapneumovirus. Virology 295: 119-132. doi:10.1006/viro.2001.1355. PubMed: 12033771.
-
(2002)
Virology
, vol.295
, pp. 119-132
-
-
Van Den Hoogen, B.G.1
Bestebroer, T.M.2
Osterhaus, A.D.3
Fouchier, R.A.4
-
7
-
-
0032104574
-
Characterization of the interaction of the human respiratory syncytial virus phosphoprotein and nucleocapsid protein using the two-hybrid system
-
doi:10.1016/S0168-1702(98)00042-2. PubMed: 9725669
-
Slack MS, Easton AJ (1998) Characterization of the interaction of the human respiratory syncytial virus phosphoprotein and nucleocapsid protein using the two-hybrid system. Virus Res 55: 167-176. doi:10.1016/S0168-1702(98)00042-2. PubMed: 9725669.
-
(1998)
Virus Res
, vol.55
, pp. 167-176
-
-
Slack, M.S.1
Easton, A.J.2
-
8
-
-
0032990332
-
A single amino acid substitution in the phosphoprotein of respiratory syncytial virus confers thermosensitivity in a reconstituted RNA polymerase system
-
PubMed: 10233981
-
Marriott AC, Wilson SD, Randhawa JS, Easton AJ (1999) A single amino acid substitution in the phosphoprotein of respiratory syncytial virus confers thermosensitivity in a reconstituted RNA polymerase system. J Virol 73: 5162-5165. PubMed: 10233981.
-
(1999)
J Virol
, vol.73
, pp. 5162-5165
-
-
Marriott, A.C.1
Wilson, S.D.2
Randhawa, J.S.3
Easton, A.J.4
-
9
-
-
0029986083
-
Mapping the domains on the phosphoprotein of bovine respiratory syncytial virus required for N-P interaction using a two-hybrid system
-
doi:10.1099/0022-1317-77-5-1019. PubMed: 8609467
-
Mallipeddi SK, Lupiani B, Samal SK (1996) Mapping the domains on the phosphoprotein of bovine respiratory syncytial virus required for N-P interaction using a two-hybrid system. J Gen Virol 77 (5): 1019-1023. doi:10.1099/0022-1317-77-5-1019. PubMed: 8609467.
-
(1996)
J Gen Virol
, vol.77
, Issue.5
, pp. 1019-1023
-
-
Mallipeddi, S.K.1
Lupiani, B.2
Samal, S.K.3
-
10
-
-
0036184744
-
Identification of temperature-sensitive mutations in the phosphoprotein of respiratory syncytial virus that are likely involved in its interaction with the nucleoprotein
-
doi:10.1128/JVI.76.6.2871-2880.2002. PubMed: 11861854
-
Lu B, Brazas R, Ma CH, Kristoff T, Cheng X et al. (2002) Identification of temperature-sensitive mutations in the phosphoprotein of respiratory syncytial virus that are likely involved in its interaction with the nucleoprotein. J Virol 76: 2871-2880. doi:10.1128/JVI.76.6.2871-2880.2002. PubMed: 11861854.
-
(2002)
J Virol
, vol.76
, pp. 2871-2880
-
-
Lu, B.1
Brazas, R.2
Ma, C.H.3
Kristoff, T.4
Cheng, X.5
-
11
-
-
0035065023
-
Mapping the domains on the phosphoprotein of bovine respiratory syncytial virus required for N-P and P-L interactions using a minigenome system
-
PubMed: 11257181
-
Khattar SK, Yunus AS, Samal SK (2001) Mapping the domains on the phosphoprotein of bovine respiratory syncytial virus required for N-P and P-L interactions using a minigenome system. J Gen Virol 82: 775-779. PubMed: 11257181.
-
(2001)
J Gen Virol
, vol.82
, pp. 775-779
-
-
Khattar, S.K.1
Yunus, A.S.2
Samal, S.K.3
-
12
-
-
0035811865
-
Deletion and substitution analysis defines regions and residues within the phosphoprotein of bovine respiratory syncytial virus that affect transcription, RNA replication, and interaction with the nucleoprotein
-
doi:10.1006/viro.2001.0960. PubMed: 11437660
-
Khattar SK, Yunus AS, Collins PL, Samal SK (2001) Deletion and substitution analysis defines regions and residues within the phosphoprotein of bovine respiratory syncytial virus that affect transcription, RNA replication, and interaction with the nucleoprotein. Virology 285: 253-269. doi:10.1006/viro.2001.0960. PubMed: 11437660.
-
(2001)
Virology
, vol.285
, pp. 253-269
-
-
Khattar, S.K.1
Yunus, A.S.2
Collins, P.L.3
Samal, S.K.4
-
13
-
-
77958027714
-
Structural disorder within sendai virus nucleoprotein and phosphoprotein: Insight into the structural basis of molecular recognition
-
doi:10.2174/092986610791498885. PubMed: 20450486
-
Jensen MR, Bernadó P, Houben K, Blanchard L, Marion D et al. (2010) Structural disorder within sendai virus nucleoprotein and phosphoprotein: insight into the structural basis of molecular recognition. Protein Pept Lett 17: 952-960. doi:10.2174/092986610791498885. PubMed: 20450486.
-
(2010)
Protein Pept Lett
, vol.17
, pp. 952-960
-
-
Jensen, M.R.1
Bernadó, P.2
Houben, K.3
Blanchard, L.4
Marion, D.5
-
14
-
-
0030031472
-
Identification of protein regions involved in the interaction of human respiratory syncytial virus phosphoprotein and nucleoprotein: Significance for nucleocapsid assembly and formation of cytoplasmic inclusions
-
PubMed: 8551618
-
García-Barreno B, Delgado T, Melero JA (1996) Identification of protein regions involved in the interaction of human respiratory syncytial virus phosphoprotein and nucleoprotein: significance for nucleocapsid assembly and formation of cytoplasmic inclusions. J Virol 70: 801-808. PubMed: 8551618.
-
(1996)
J Virol
, vol.70
, pp. 801-808
-
-
García-Barreno, B.1
Delgado, T.2
Melero, J.A.3
-
15
-
-
56349087485
-
Human metapneumovirus nucleoprotein and phosphoprotein interact and provide the minimal requirements for inclusion body formation
-
doi:10.1099/vir.0.2008/004051-0. PubMed: 18931065
-
Derdowski A, Peters TR, Glover N, Qian R, Utley TJ et al. (2008) Human metapneumovirus nucleoprotein and phosphoprotein interact and provide the minimal requirements for inclusion body formation. J Gen Virol 89: 2698-2708. doi:10.1099/vir.0.2008/004051-0. PubMed: 18931065.
-
(2008)
J Gen Virol
, vol.89
, pp. 2698-2708
-
-
Derdowski, A.1
Peters, T.R.2
Glover, N.3
Qian, R.4
Utley, T.J.5
-
16
-
-
0346752214
-
Structural disorder and modular organization in Paramyxovirinae N and P
-
doi:10.1099/vir.0.19451-0. PubMed: 14645906
-
Karlin D, Ferron F, Canard B, Longhi S (2003) Structural disorder and modular organization in Paramyxovirinae N and P. J Gen Virol 84: 3239-3252. doi:10.1099/vir.0.19451-0. PubMed: 14645906.
-
(2003)
J Gen Virol
, vol.84
, pp. 3239-3252
-
-
Karlin, D.1
Ferron, F.2
Canard, B.3
Longhi, S.4
-
17
-
-
80053445234
-
Structure of the vesicular stomatitis virus N(0)-P complex
-
Leyrat C, Yabukarski F, Tarbouriech N, Ribeiro EA Jr., Jensen MR et al. Structure of the vesicular stomatitis virus N(0)-P complex. PLOS Pathog 7: e1002248.
-
PLOS Pathog
, vol.7
-
-
Leyrat, C.1
Yabukarski, F.2
Tarbouriech, N.3
Ribeiro Jr., E.A.4
Jensen, M.R.5
-
18
-
-
0033030058
-
Role of the M2-1 transcription antitermination protein of respiratory syncytial virus in sequential transcription
-
PubMed: 10364337
-
Fearns R, Collins PL (1999) Role of the M2-1 transcription antitermination protein of respiratory syncytial virus in sequential transcription. J Virol 73: 5852-5864. PubMed: 10364337.
-
(1999)
J Virol
, vol.73
, pp. 5852-5864
-
-
Fearns, R.1
Collins, P.L.2
-
19
-
-
18744408468
-
Deletion of M2 gene open reading frames 1 and 2 of human metapneumovirus: Effects on RNA synthesis, attenuation, and immunogenicity
-
doi:10.1128/JVI.79.11.6588-6597.2005. PubMed: 15890897
-
Buchholz UJ, Biacchesi S, Pham QN, Tran KC, Yang L et al. (2005) Deletion of M2 gene open reading frames 1 and 2 of human metapneumovirus: effects on RNA synthesis, attenuation, and immunogenicity. J Virol 79: 6588-6597. doi:10.1128/JVI.79.11.6588-6597.2005. PubMed: 15890897.
-
(2005)
J Virol
, vol.79
, pp. 6588-6597
-
-
Buchholz, U.J.1
Biacchesi, S.2
Pham, Q.N.3
Tran, K.C.4
Yang, L.5
-
20
-
-
0033813425
-
Tetrameric coiled coil domain of Sendai virus phosphoprotein
-
doi:10.1038/79013. PubMed: 10966649
-
Tarbouriech N, Curran J, Ruigrok RW, Burmeister WP (2000) Tetrameric coiled coil domain of Sendai virus phosphoprotein. Nat Struct Biol 7: 777-781. doi:10.1038/79013. PubMed: 10966649.
-
(2000)
Nat Struct Biol
, vol.7
, pp. 777-781
-
-
Tarbouriech, N.1
Curran, J.2
Ruigrok, R.W.3
Burmeister, W.P.4
-
21
-
-
84878585682
-
Structure of the tetramerization domain of measles virus phosphoprotein
-
doi:10.1128/JVI.00487-13. PubMed: 23576502
-
Communie G, Crépin T, Maurin D, Jensen MR, Blackledge M et al. (2013) Structure of the tetramerization domain of measles virus phosphoprotein. J Virol 87: 7166-7169. doi:10.1128/JVI.00487-13. PubMed: 23576502.
-
(2013)
J Virol
, vol.87
, pp. 7166-7169
-
-
Communie, G.1
Crépin, T.2
Maurin, D.3
Jensen, M.R.4
Blackledge, M.5
-
22
-
-
84880345675
-
Structural and functional characterization of the mumps virus phosphoprotein
-
doi:10.1128/JVI.00653-13. PubMed: 23637399
-
Cox R, Green TJ, Purushotham S, Deivanayagam C, Bedwell GJ et al. (2013) Structural and functional characterization of the mumps virus phosphoprotein. J Virol 87: 7558-7568. doi:10.1128/JVI.00653-13. PubMed: 23637399.
-
(2013)
J Virol
, vol.87
, pp. 7558-7568
-
-
Cox, R.1
Green, T.J.2
Purushotham, S.3
Deivanayagam, C.4
Bedwell, G.J.5
-
23
-
-
30344469079
-
Structural analysis of the human respiratory syncytial virus phosphoprotein: Characterization of an alpha-helical domain involved in oligomerization
-
doi:10.1099/vir.0.81430-0. PubMed: 16361428
-
Llorente MT, García-Barreno B, Calero M, Camafeita E, López JA et al. (2006) Structural analysis of the human respiratory syncytial virus phosphoprotein: characterization of an alpha-helical domain involved in oligomerization. J Gen Virol 87: 159-169. doi:10.1099/vir.0.81430-0. PubMed: 16361428.
-
(2006)
J Gen Virol
, vol.87
, pp. 159-169
-
-
Llorente, M.T.1
García-Barreno, B.2
Calero, M.3
Camafeita, E.4
López, J.A.5
-
24
-
-
47349091097
-
Structural properties of the human respiratory syncytial virus P protein: Evidence for an elongated homotetrameric molecule that is the smallest orthologue within the family of paramyxovirus polymerase cofactors
-
doi:10.1002/prot.21988. PubMed: 18300250
-
Llorente MT, Taylor IA, López-Viñas E, Gomez-Puertas P, Calder LJ et al. (2008) Structural properties of the human respiratory syncytial virus P protein: evidence for an elongated homotetrameric molecule that is the smallest orthologue within the family of paramyxovirus polymerase cofactors. Proteins 72: 946-958. doi:10.1002/prot.21988. PubMed: 18300250.
-
(2008)
Proteins
, vol.72
, pp. 946-958
-
-
Llorente, M.T.1
Taylor, I.A.2
López-Viñas, E.3
Gomez-Puertas, P.4
Calder, L.J.5
-
25
-
-
79952149646
-
The N(0)-binding region of the vesicular stomatitis virus phosphoprotein is globally disordered but contains transient alpha-helices
-
doi:10.1002/pro.587. PubMed: 21207454
-
Leyrat C, Jensen MR, Ribeiro EA Jr., Gérard FC, Ruigrok RW et al. (2011) The N(0)-binding region of the vesicular stomatitis virus phosphoprotein is globally disordered but contains transient alpha-helices. Protein Sci 20: 542-556. doi:10.1002/pro.587. PubMed: 21207454.
-
(2011)
Protein Sci
, vol.20
, pp. 542-556
-
-
Leyrat, C.1
Jensen, M.R.2
Ribeiro Jr., E.A.3
Gérard, F.C.4
Ruigrok, R.W.5
-
26
-
-
84876800465
-
Accurate assessment of mass, models and resolution by small-angle scattering
-
doi:10.1038/nature12070. PubMed: 23619693
-
Rambo RP, Tainer JA. (2013) Accurate assessment of mass, models and resolution by small-angle scattering. Nature 496: 477-481. doi:10.1038/ nature12070. PubMed: 23619693.
-
(2013)
Nature
, vol.496
, pp. 477-481
-
-
Rambo, R.P.1
Tainer, J.A.2
-
27
-
-
73149111493
-
Simultaneous prediction of protein folding and docking at high resolution
-
doi:10.1073/pnas.0904407106. PubMed: 19864631
-
Das R, André I, Shen Y, Wu Y, Lemak A et al. (2009) Simultaneous prediction of protein folding and docking at high resolution. Proc Natl Acad Sci U S A 106: 18978-18983. doi:10.1073/pnas.0904407106. PubMed: 19864631.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 18978-18983
-
-
Das, R.1
André, I.2
Shen, Y.3
Wu, Y.4
Lemak, A.5
-
28
-
-
34247891557
-
Structural characterization of flexible proteins using small-angle X-ray scattering
-
doi:10.1021/ja069124n. PubMed: 17411046
-
Bernadó P, Mylonas E, Petoukhov MV, Blackledge M, Svergun DI (2007) Structural characterization of flexible proteins using small-angle X-ray scattering. J Am Chem Soc 129: 5656-5664. doi:10.1021/ja069124n. PubMed: 17411046.
-
(2007)
J Am Chem Soc
, vol.129
, pp. 5656-5664
-
-
Bernadó, P.1
Mylonas, E.2
Petoukhov, M.V.3
Blackledge, M.4
Svergun, D.I.5
-
29
-
-
63449135082
-
An all-atom structure-based potential for proteins: Bridging minimal models with all-atom empirical forcefields
-
doi:10.1002/prot.22253. PubMed: 18837035
-
Whitford PC, Noel JK, Gosavi S, Schug A, Sanbonmatsu KY et al. (2009) An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields. Proteins 75: 430-441. doi:10.1002/prot.22253. PubMed: 18837035.
-
(2009)
Proteins
, vol.75
, pp. 430-441
-
-
Whitford, P.C.1
Noel, J.K.2
Gosavi, S.3
Schug, A.4
Sanbonmatsu, K.Y.5
-
30
-
-
67650992092
-
Structure and flexibility within proteins as identified through small angle X-ray scattering
-
doi:10.4149/gpb-2009-02-174. PubMed: 19592714
-
Pelikan M, Hura GL, Hammel M (2009) Structure and flexibility within proteins as identified through small angle X-ray scattering. Gen Physiol Biophys 28: 174-189. doi:10.4149/gpb-2009-02-174. PubMed: 19592714.
-
(2009)
Gen Physiol Biophys
, vol.28
, pp. 174-189
-
-
Pelikan, M.1
Hura, G.L.2
Hammel, M.3
-
31
-
-
0037438709
-
Physical-chemical features of non-detergent sulfobetaines active as protein-folding helpers
-
doi:10.1016/S0301-4622(02)00299-5. PubMed: 12646384
-
Expert-Bezançon N, Rabilloud T, Vuillard L, Goldberg ME (2003) Physical-chemical features of non-detergent sulfobetaines active as protein-folding helpers. Biophys Chem 100: 469-479. doi:10.1016/S0301-4622(02) 00299-5. PubMed: 12646384.
-
(2003)
Biophys Chem
, vol.100
, pp. 469-479
-
-
Expert-Bezançon, N.1
Rabilloud, T.2
Vuillard, L.3
Goldberg, M.E.4
-
32
-
-
0141632677
-
Interaction between human respiratory syncytial virus (RSV) M2-1 and P proteins is required for reconstitution of M2-1-dependent RSV minigenome activity
-
doi:10.1128/JVI.77.19.10670-10676.2003. PubMed: 12970453
-
Mason SW, Aberg E, Lawetz C, DeLong R, Whitehead P et al. (2003) Interaction between human respiratory syncytial virus (RSV) M2-1 and P proteins is required for reconstitution of M2-1-dependent RSV minigenome activity. J Virol 77: 10670-10676. doi:10.1128/JVI.77.19.10670-10676.2003. PubMed: 12970453.
-
(2003)
J Virol
, vol.77
, pp. 10670-10676
-
-
Mason, S.W.1
Aberg, E.2
Lawetz, C.3
DeLong, R.4
Whitehead, P.5
-
33
-
-
50249088825
-
Solution structure of the C-terminal nucleoprotein-RNA binding domain of the vesicular stomatitis virus phosphoprotein
-
doi:10.1016/j.jmb.2008.07.028. PubMed: 18657547
-
Ribeiro EA Jr., Favier A, Gerard FC, Leyrat C, Brutscher B et al. (2008) Solution structure of the C-terminal nucleoprotein-RNA binding domain of the vesicular stomatitis virus phosphoprotein. J Mol Biol 382: 525-538. doi:10.1016/j.jmb.2008.07.028. PubMed: 18657547.
-
(2008)
J Mol Biol
, vol.382
, pp. 525-538
-
-
Ribeiro Jr., E.A.1
Favier, A.2
Gerard, F.C.3
Leyrat, C.4
Brutscher, B.5
-
34
-
-
84883285004
-
Structure of the C-terminal domain of Lettuce Necrotic Yellows Virus phosphoprotein
-
PubMed: 23785215
-
Martinez N, Ribeiro EA Jr., Leyrat C, Tarbouriech N, Ruigrok RW et al. (2013) Structure of the C-terminal domain of Lettuce Necrotic Yellows Virus phosphoprotein. J Virol, 87: 9569-78. PubMed: 23785215.
-
(2013)
J Virol
, vol.87
, pp. 9569-9578
-
-
Martinez, N.1
Ribeiro Jr., E.A.2
Leyrat, C.3
Tarbouriech, N.4
Ruigrok, R.W.5
-
35
-
-
5144222412
-
Structure and function of the C-terminal domain of the polymerase cofactor of rabies virus
-
doi:10.1016/j.jmb.2004.08.071. PubMed: 15476803
-
Mavrakis M, McCarthy AA, Roche S, Blondel D, Ruigrok RW (2004) Structure and function of the C-terminal domain of the polymerase cofactor of rabies virus. J Mol Biol 343: 819-831. doi:10.1016/j.jmb.2004.08.071. PubMed: 15476803.
-
(2004)
J Mol Biol
, vol.343
, pp. 819-831
-
-
Mavrakis, M.1
McCarthy, A.A.2
Roche, S.3
Blondel, D.4
Ruigrok, R.W.5
-
36
-
-
1342321890
-
Structure and dynamics of the nucleocapsid-binding domain of the Sendai virus phosphoprotein in solution
-
doi:10.1016/j.virol.2003.10.029. PubMed: 14980481
-
Blanchard L, Tarbouriech N, Blackledge M, Timmins P, Burmeister WP et al. (2004) Structure and dynamics of the nucleocapsid-binding domain of the Sendai virus phosphoprotein in solution. Virology 319: 201-211. doi:10.1016/j.virol. 2003.10.029. PubMed: 14980481.
-
(2004)
Virology
, vol.319
, pp. 201-211
-
-
Blanchard, L.1
Tarbouriech, N.2
Blackledge, M.3
Timmins, P.4
Burmeister, W.P.5
-
37
-
-
0242582329
-
Crystal structure of the measles virus phosphoprotein domain responsible for the induced folding of the C-terminal domain of the nucleoprotein
-
doi:10.1074/jbc.M308745200. PubMed: 12944395
-
Johansson K, Bourhis JM, Campanacci V, Cambillau C, Canard B et al. (2003) Crystal structure of the measles virus phosphoprotein domain responsible for the induced folding of the C-terminal domain of the nucleoprotein. J Biol Chem 278: 44567-44573. doi:10.1074/jbc.M308745200. PubMed: 12944395.
-
(2003)
J Biol Chem
, vol.278
, pp. 44567-44573
-
-
Johansson, K.1
Bourhis, J.M.2
Campanacci, V.3
Cambillau, C.4
Canard, B.5
-
38
-
-
77955399035
-
Structural disorder within Henipavirus nucleoprotein and phosphoprotein: From predictions to experimental assessment
-
doi:10.1371/journal.pone.0011684. PubMed: 20657787
-
Habchi J, Mamelli L, Darbon H, Longhi S. (2010) Structural disorder within Henipavirus nucleoprotein and phosphoprotein: from predictions to experimental assessment. PLOS ONE 5: e11684. doi:10.1371/journal.pone.0011684. PubMed: 20657787.
-
(2010)
PLOS ONE
, vol.5
-
-
Habchi, J.1
Mamelli, L.2
Darbon, H.3
Longhi, S.4
-
39
-
-
77956596750
-
Structural disorder within the measles virus nucleoprotein and phosphoprotein
-
doi:10.2174/092986610791498894. PubMed: 20450481
-
Longhi S, Oglesbee M. (2010) Structural disorder within the measles virus nucleoprotein and phosphoprotein. Protein Pept Lett 17: 961-978. doi:10.2174/092986610791498894. PubMed: 20450481.
-
(2010)
Protein Pept Lett
, vol.17
, pp. 961-978
-
-
Longhi, S.1
Oglesbee, M.2
-
40
-
-
77958044825
-
Structural disorder in proteins of the rhabdoviridae replication complex
-
doi: 10.2174/092986610791498939. PubMed: 20450482
-
Leyrat C, Gérard FC, de Almeida Ribeiro E Jr., Ivanov I, Ruigrok RW et al. (2010) Structural disorder in proteins of the rhabdoviridae replication complex. Protein Pept Lett 17: 979-987. doi: 10.2174/ 092986610791498939. PubMed: 20450482.
-
(2010)
Protein Pept Lett
, vol.17
, pp. 979-987
-
-
Leyrat, C.1
Gérard, F.C.2
De Almeida Ribeiro Jr., E.3
Ivanov, I.4
Ruigrok, R.W.5
-
41
-
-
67349262756
-
Modular organization of rabies virus phosphoprotein
-
doi:10.1016/j.jmb.2009.03.061. PubMed: 19341745
-
Gerard FC, Ribeiro Ede A Jr., Leyrat C, Ivanov I, Blondel D et al. (2009) Modular organization of rabies virus phosphoprotein. J Mol Biol 388: 978-996. doi:10.1016/j.jmb.2009.03.061. PubMed: 19341745.
-
(2009)
J Mol Biol
, vol.388
, pp. 978-996
-
-
Gerard, F.C.1
Ribeiro Ede Jr., A.2
Leyrat, C.3
Ivanov, I.4
Blondel, D.5
-
42
-
-
84866501486
-
Ensemble structure of the modular and flexible full-length vesicular stomatitis virus phosphoprotein
-
doi:10.1016/j.jmb.2012.07.003. PubMed: 22789567
-
Leyrat C, Schneider R, Ribeiro EA Jr., Yabukarski F, Yao M et al. (2012) Ensemble structure of the modular and flexible full-length vesicular stomatitis virus phosphoprotein. J Mol Biol 423: 182-197. doi:10.1016/j.jmb.2012.07.003. PubMed: 22789567.
-
(2012)
J Mol Biol
, vol.423
, pp. 182-197
-
-
Leyrat, C.1
Schneider, R.2
Ribeiro Jr., E.A.3
Yabukarski, F.4
Yao, M.5
-
43
-
-
84860821329
-
Structure unifies the viral universe
-
doi:10.1146/annurev-biochem-060910-095130. PubMed: 22482909
-
Abrescia NG, Bamford DH, Grimes JM, Stuart DI. (2012) Structure unifies the viral universe. Annu Rev Biochem 81: 795-822. doi:10.1146/annurev-biochem- 060910-095130. PubMed: 22482909.
-
(2012)
Annu Rev Biochem
, vol.81
, pp. 795-822
-
-
Abrescia, N.G.1
Bamford, D.H.2
Grimes, J.M.3
Stuart, D.I.4
-
44
-
-
84865366233
-
Isolation and molecular identification of Sunshine virus, a novel paramyxovirus found in Australian snakes
-
doi:10.1016/j.meegid.2012.04.022. PubMed: 22575820
-
Hyndman TH, Marschang RE, Wellehan JF Jr., Nicholls PK. (2012) Isolation and molecular identification of Sunshine virus, a novel paramyxovirus found in Australian snakes. Infect Genet Evol 12: 1436-1446. doi:10.1016/j.meegid.2012. 04.022. PubMed: 22575820.
-
(2012)
Infect Genet Evol
, vol.12
, pp. 1436-1446
-
-
Hyndman, T.H.1
Marschang, R.E.2
Wellehan Jr., J.F.3
Nicholls, P.K.4
-
45
-
-
0036300912
-
Protein structure prediction constrained by solution X-ray scattering data and structural homology identification
-
doi:10.1006/jmbi.2001.5324. PubMed: 11829511
-
Zheng W, Doniach S (2002) Protein structure prediction constrained by solution X-ray scattering data and structural homology identification. J Mol Biol 316: 173-187. doi:10.1006/jmbi.2001.5324. PubMed: 11829511.
-
(2002)
J Mol Biol
, vol.316
, pp. 173-187
-
-
Zheng, W.1
Doniach, S.2
-
46
-
-
20844445255
-
Fold recognition aided by constraints from small angle X-ray scattering data
-
doi:10.1093/protein/gzi026. PubMed: 15845555
-
Zheng W, Doniach S (2005) Fold recognition aided by constraints from small angle X-ray scattering data. Protein Eng Des Sel 18: 209-219. doi:10.1093/protein/gzi026. PubMed: 15845555.
-
(2005)
Protein Eng des Sel
, vol.18
, pp. 209-219
-
-
Zheng, W.1
Doniach, S.2
-
47
-
-
77957221991
-
Structural characterization of protein-protein complexes by integrating computational docking with small-angle scattering data
-
doi:10.1016/j.jmb.2010.08.029. PubMed: 20804770
-
Pons C, D'Abramo M, Svergun DI, Orozco M, Bernadó P et al. (2010) Structural characterization of protein-protein complexes by integrating computational docking with small-angle scattering data. J Mol Biol 403: 217-230. doi:10.1016/j.jmb.2010.08.029. PubMed: 20804770.
-
(2010)
J Mol Biol
, vol.403
, pp. 217-230
-
-
Pons, C.1
D'Abramo, M.2
Svergun, D.I.3
Orozco, M.4
Bernadó, P.5
-
48
-
-
79851511415
-
Macromolecular docking restrained by a small angle X-ray scattering profile
-
doi:10.1016/j.jsb.2010.09.023. PubMed: 20920583
-
Schneidman-Duhovny D, Hammel M, Sali A. (2011) Macromolecular docking restrained by a small angle X-ray scattering profile. J Struct Biol 173: 461-471. doi:10.1016/j.jsb.2010.09.023. PubMed: 20920583.
-
(2011)
J Struct Biol
, vol.173
, pp. 461-471
-
-
Schneidman-Duhovny, D.1
Hammel, M.2
Sali, A.3
-
49
-
-
39449089086
-
Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?
-
doi:10.1186/1471-2105-9-S9-S6. PubMed: 18179702
-
Taly JF, Marin A, Gibrat JF (2008) Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models? BMC Bioinformatics 9: 6. doi:10.1186/1471-2105-9-S9-S6. PubMed: 18179702.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 6
-
-
Taly, J.F.1
Marin, A.2
Gibrat, J.F.3
-
50
-
-
77954276842
-
SMOG@ctbp: Simplified deployment of structure-based models in GROMACS
-
doi:10.1093/nar/gkq498. PubMed: 20525782
-
Noel JK, Whitford PC, Sanbonmatsu KY, Onuchic JN. (2010) SMOG@ctbp: simplified deployment of structure-based models in GROMACS. Nucleic Acids Res 38: W657-W661. doi:10.1093/nar/gkq498. PubMed: 20525782.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Noel, J.K.1
Whitford, P.C.2
Sanbonmatsu, K.Y.3
Onuchic, J.N.4
-
51
-
-
84891876280
-
-
Wassenaar T, Dijk M, Loureiro-Ferreira N, Schot G, Vries S et al.. WeNMR: Structural Biology on the Grid. - 10: - 767.
-
WeNMR: Structural Biology on the Grid
, vol.10
, pp. 767
-
-
Wassenaar, T.1
Dijk, M.2
Loureiro-Ferreira, N.3
Schot, G.4
Vries, S.5
-
52
-
-
34247846396
-
A versatile ligation-independent cloning method suitable for high-throughput expression screening applications
-
doi:10.1093/nar/gkm047. PubMed: 17317681
-
Berrow NS, Alderton D, Sainsbury S, Nettleship J, Assenberg R et al. (2007) A versatile ligation-independent cloning method suitable for high-throughput expression screening applications. Nucleic Acids Res 35: e45. doi:10.1093/nar/gkm047. PubMed: 17317681.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Berrow, N.S.1
Alderton, D.2
Sainsbury, S.3
Nettleship, J.4
Assenberg, R.5
-
53
-
-
50649095790
-
Macromolecular modeling with rosetta
-
doi:10.1146/annurev.biochem. 77.062906.171838. PubMed: 18410248
-
Das R, Baker D (2008) Macromolecular modeling with rosetta. Annu Rev Biochem 77: 363-382. doi:10.1146/annurev.biochem. 77.062906.171838. PubMed: 18410248.
-
(2008)
Annu Rev Biochem
, vol.77
, pp. 363-382
-
-
Das, R.1
Baker, D.2
-
54
-
-
1642464839
-
Protein structure prediction using Rosetta
-
doi:10.1016/S0076-6879(04)83004-0. PubMed: 15063647
-
Rohl CA, Strauss CE, Misura KM, Baker D (2004) Protein structure prediction using Rosetta. Methods Enzymol 383: 66-93. doi:10.1016/S0076-6879(04) 83004-0. PubMed: 15063647.
-
(2004)
Methods Enzymol
, vol.383
, pp. 66-93
-
-
Rohl, C.A.1
Strauss, C.E.2
Misura, K.M.3
Baker, D.4
-
55
-
-
0029185933
-
CRYSOL-a program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates
-
doi:10.1107/S0021889895007047
-
Svergun D, Barberato C, Koch MHJ (1995) CRYSOL-a program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates. J Appl Crystallogr 28: 768-773. doi:10.1107/S0021889895007047.
-
(1995)
J Appl Crystallogr
, vol.28
, pp. 768-773
-
-
Svergun, D.1
Barberato, C.2
Koch, M.H.J.3
-
56
-
-
46249092554
-
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
-
doi:10.1021/ct700301q
-
Hess B, Kutzner C, van der Spoel D, Lindahl E (2008) GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation. J Chem Theory Computation 4: 435-447. doi:10.1021/ct700301q.
-
(2008)
J Chem Theory Computation
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
Van Der Spoel, D.3
Lindahl, E.4
-
57
-
-
67649494492
-
Optimized Molecular Dynamics Force Fields Applied to the Helixâ̂'Coil Transition of Polypeptides
-
doi:10.1021/jp901540t. PubMed: 19514729
-
Best RB, Hummer G (2009) Optimized Molecular Dynamics Force Fields Applied to the Helixâ̂'Coil Transition of Polypeptides. J Phys Chem B 113: 9004-9015. doi:10.1021/jp901540t. PubMed: 19514729.
-
(2009)
J Phys Chem B
, vol.113
, pp. 9004-9015
-
-
Best, R.B.1
Hummer, G.2
-
58
-
-
77953513118
-
Improved side-chain torsion potentials for the Amber ff99SB protein force field
-
PubMed: 20408171
-
Lindorff-Larsen K, Piana S, Palmo K, Maragakis P, Klepeis JL et al. (2010) Improved side-chain torsion potentials for the Amber ff99SB protein force field. Proteins 78: 1950-1958. PubMed: 20408171.
-
(2010)
Proteins
, vol.78
, pp. 1950-1958
-
-
Lindorff-Larsen, K.1
Piana, S.2
Palmo, K.3
Maragakis, P.4
Klepeis, J.L.5
-
59
-
-
33645961739
-
A smooth particle mesh Ewald method
-
doi:10.1063/1.470117
-
Essmann U, Perera L, Berkowitz ML, Darden T, Lee H et al. (1995) A smooth particle mesh Ewald method. J Chem Phys 103: 8577-8593. doi:10.1063/1.470117.
-
(1995)
J Chem Phys
, vol.103
, pp. 8577-8593
-
-
Essmann, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.4
Lee, H.5
-
60
-
-
38749123962
-
P-lincs: A parallel linear constraint solver for molecular simulation
-
Hess B (2008) P-lincs: A parallel linear constraint solver for molecular simulation. J Chem Theory Comput 4: 116-122.
-
(2008)
J Chem Theory Comput
, vol.4
, pp. 116-122
-
-
Hess, B.1
-
62
-
-
33846086933
-
Canonical sampling through velocity rescaling
-
doi:10.1063/1.2408420. PubMed: 17212484
-
Bussi G, Donadio D, Parrinello M (2007) Canonical sampling through velocity rescaling. J Chem Phys 126: 014101. doi:10.1063/1.2408420. PubMed: 17212484.
-
(2007)
J Chem Phys
, vol.126
, pp. 014101
-
-
Bussi, G.1
Donadio, D.2
Parrinello, M.3
-
64
-
-
23844515485
-
A procedure for setting up high-throughput nanolitre crystallization experiments. Crystallization workflow for initial screening, automated storage, imaging and optimization
-
doi:10.1107/S1744309105016933. PubMed: 15930615
-
Walter TS, Diprose JM, Mayo CJ, Siebold C, Pickford MG et al. (2005) A procedure for setting up high-throughput nanolitre crystallization experiments. Crystallization workflow for initial screening, automated storage, imaging and optimization. Acta Crystallogr D Biol Crystallogr 61: 651-657. doi:10.1107/S1744309105016933. PubMed: 15930615.
-
(2005)
Acta Crystallogr D Biol Crystallogr
, vol.61
, pp. 651-657
-
-
Walter, T.S.1
Diprose, J.M.2
Mayo, C.J.3
Siebold, C.4
Pickford, M.G.5
-
66
-
-
33644875355
-
Scaling and assessment of data quality
-
doi:10.1107/S0108767306098564. PubMed: 16369096
-
Evans P (2006) Scaling and assessment of data quality. Acta Crystallogr D Biol Crystallogr 62: 72-82. doi:10.1107/S0108767306098564. PubMed: 16369096.
-
(2006)
Acta Crystallogr D Biol Crystallogr
, vol.62
, pp. 72-82
-
-
Evans, P.1
-
68
-
-
34447508216
-
Phaser crystallographic software
-
doi:10.1107/S0021889807021206. PubMed: 19461840
-
McCoy AJ, Grosse-Kunstleve RW, Adams PD, Winn MD, Storoni LC et al. (2007) Phaser crystallographic software. J Appl Crystallogr 40: 658-674. doi:10.1107/S0021889807021206. PubMed: 19461840.
-
(2007)
J Appl Crystallogr
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
-
69
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
doi: 10.1107/S0907444909052925. PubMed: 20124702
-
Adams PD, Afonine PV, Bunkóczi G, Chen VB, Davis IW et al. (2010) PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D Biol Crystallogr 66: 213-221. doi: 10.1107/S0907444909052925. PubMed: 20124702.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkóczi, G.3
Chen, V.B.4
Davis, I.W.5
-
70
-
-
14844321328
-
Refinement of severely incomplete structures with maximum likelihood in BUSTER-TNT
-
doi:10.1107/S0907444904016427. PubMed: 15572774
-
Blanc E, Roversi P, Vonrhein C, Flensburg C, Lea SM et al. (2004) Refinement of severely incomplete structures with maximum likelihood in BUSTER-TNT. Acta Crystallogr D Biol Crystallogr 60: 2210-2221. doi:10.1107/S0907444904016427. PubMed: 15572774.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, pp. 2210-2221
-
-
Blanc, E.1
Roversi, P.2
Vonrhein, C.3
Flensburg, C.4
Lea, S.M.5
-
72
-
-
84860287260
-
Exploiting structure similarity in refinement: Automated NCS and target-structure restraints in BUSTER
-
doi:10.1107/S0907444911056058. PubMed: 22505257
-
Smart OS, Womack TO, Flensburg C, Keller P, Paciorek W et al. (2012) Exploiting structure similarity in refinement: automated NCS and target-structure restraints in BUSTER. Acta Crystallogr D Biol Crystallogr 68: 368-380. doi:10.1107/S0907444911056058. PubMed: 22505257.
-
(2012)
Acta Crystallogr D Biol Crystallogr
, vol.68
, pp. 368-380
-
-
Smart, O.S.1
Womack, T.O.2
Flensburg, C.3
Keller, P.4
Paciorek, W.5
-
73
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
doi:10.1107/S0907444910045749. PubMed: 21460441
-
Winn MD, Ballard CC, Cowtan KD, Dodson EJ, Emsley P et al. (2011) Overview of the CCP4 suite and current developments. Acta Crystallogr D Biol Crystallogr 67: 235-242. doi:10.1107/S0907444910045749. PubMed: 21460441.
-
(2011)
Acta Crystallogr D Biol Crystallogr
, vol.67
, pp. 235-242
-
-
Winn, M.D.1
Ballard, C.C.2
Cowtan, K.D.3
Dodson, E.J.4
Emsley, P.5
-
74
-
-
74549178560
-
MolProbity: All-atom structure validation for macromolecular crystallography
-
doi:10.1107/S1744309109042018. PubMed: 20057044
-
Chen VB, Arendall WB 3rd, Headd JJ, Keedy DA, Immormino RM et al. (2010) MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr D Biol Crystallogr 66: 12-21. doi:10.1107/S1744309109042018. PubMed: 20057044.
-
(2010)
Acta Crystallogr D Biol Crystallogr
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Arendall III, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
-
75
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
doi:10.1016/j.jmb.2007.05.022. PubMed: 17681537
-
Krissinel E, Henrick K (2007) Inference of macromolecular assemblies from crystalline state. J Mol Biol 372: 774-797. doi:10.1016/j.jmb.2007.05.022. PubMed: 17681537.
-
(2007)
J Mol Biol
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
76
-
-
0034843597
-
AL2CO: Calculation of positional conservation in a protein sequence alignment
-
doi:10.1093/bioinformatics/17.8.700. PubMed: 11524371
-
Pei J, Grishin NV (2001) AL2CO: calculation of positional conservation in a protein sequence alignment. Bioinformatics 17: 700-712. doi:10.1093/ bioinformatics/17.8.700. PubMed: 11524371.
-
(2001)
Bioinformatics
, vol.17
, pp. 700-712
-
-
Pei, J.1
Grishin, N.V.2
-
77
-
-
0033990046
-
Phylogenetic analysis using PHYLIP
-
PubMed: 10547839
-
Retief JD (2000) Phylogenetic analysis using PHYLIP. Methods Mol Biol 132: 243-258. PubMed: 10547839.
-
(2000)
Methods Mol Biol
, vol.132
, pp. 243-258
-
-
Retief, J.D.1
|