-
1
-
-
35748938227
-
Comments on the NIGMS PSI
-
Harrison, S. C. Comments on the NIGMS PSI. Structure 15, 1344-1346 (2007).
-
(2007)
Structure
, vol.15
, pp. 1344-1346
-
-
Harrison, S.C.1
-
2
-
-
68349097394
-
Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS)
-
Hura, G. L. et al. Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS). Nature Methods 6, 606-612 (2009).
-
(2009)
Nature Methods
, vol.6
, pp. 606-612
-
-
Hura, G.L.1
-
3
-
-
77749311718
-
Bridging the solution divide: Comprehensive structural analyses of dynamic RNA, DNA, and protein assemblies by small-angle X-ray scattering
-
Rambo, R. P. & Tainer, J. A. Bridging the solution divide: comprehensive structural analyses of dynamic RNA, DNA, and protein assemblies by small-angle X-ray scattering. Curr. Opin. Struct. Biol. 20, 128-137 (2010).
-
(2010)
Curr. Opin. Struct. Biol
, vol.20
, pp. 128-137
-
-
Rambo, R.P.1
Tainer, J.A.2
-
4
-
-
79958049200
-
New era ofmolecular structure and dynamics from solution scattering experiments
-
Sosnick, T. R. &Woodson, S. A. New era ofmolecular structure and dynamics from solution scattering experiments. Biopolymers 95, 503-504 (2011).
-
(2011)
Biopolymers
, vol.95
, pp. 503-504
-
-
Sosnick, T.R.1
Woodson, S.A.2
-
6
-
-
37149049312
-
X-ray solution scattering (SAXS) combined with crystallography and computation: Defining accurate macromolecular structures, conformations and assemblies in solution
-
Putnam, C. D., Hammel, M., Hura, G. L. & Tainer, J. A. X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in solution. Q. Rev. Biophys. 40, 191-285 (2007).
-
(2007)
Q. Rev. Biophys
, vol.40
, pp. 191-285
-
-
Putnam, C.D.1
Hammel, M.2
Hura, G.L.3
Tainer, J.A.4
-
7
-
-
77950223101
-
Small-angle scattering for structural biology-expanding the frontier while avoiding the pitfalls
-
Jacques, D. A. & Trewhella, J. Small-angle scattering for structural biology-expanding the frontier while avoiding the pitfalls. Protein Sci. 19, 642-657 (2010).
-
(2010)
Protein Sci
, vol.19
, pp. 642-657
-
-
Jacques, D.A.1
Trewhella, J.2
-
8
-
-
12844260994
-
Probing counterion modulated repulsion and attraction between nucleic acid duplexes in solution
-
Bai, Y., Das, R., Millett, I. S., Herschlag, D. & Doniach, S. Probing counterion modulated repulsion and attraction between nucleic acid duplexes in solution. Proc. Natl Acad. Sci. USA 102, 1035-1040 (2005).
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 1035-1040
-
-
Bai, Y.1
Das, R.2
Millett, I.S.3
Herschlag, D.4
Doniach, S.5
-
9
-
-
0000403125
-
Small-angle scattering. Information content and error analysis
-
Moore, P. Small-angle scattering. Information content and error analysis. J. Appl. Crystallogr. 13, 168-175 (1980).
-
(1980)
J. Appl. Crystallogr
, vol.13
, pp. 168-175
-
-
Moore, P.1
-
10
-
-
77149170364
-
Improving small-angle X-ray scattering data for structural analyses of the RNA world
-
Rambo, R. P. & Tainer, J. A. Improving small-angle X-ray scattering data for structural analyses of the RNA world. RNA 16, 638-646 (2010).
-
(2010)
RNA
, vol.16
, pp. 638-646
-
-
Rambo, R.P.1
Tainer, J.A.2
-
11
-
-
71449098436
-
Structural mechanism of abscisic acid binding and signaling by dimeric PYR1
-
Nishimura, N. et al. Structural mechanism of abscisic acid binding and signaling by dimeric PYR1. Science 326, 1373-1379 (2009).
-
(2009)
Science
, vol.326
, pp. 1373-1379
-
-
Nishimura, N.1
-
12
-
-
71549134755
-
Modulation of drought resistance by the abscisic acid receptor PYL5 through inhibition of clade A PP2Cs
-
Santiago, J. et al. Modulation of drought resistance by the abscisic acid receptor PYL5 through inhibition of clade A PP2Cs. Plant J. 60, 575-588 (2009).
-
(2009)
Plant J
, vol.60
, pp. 575-588
-
-
Santiago, J.1
-
13
-
-
77954627025
-
Free state conformational sampling of the SAM-I riboswitch aptamer domain
-
Stoddard, C. D. et al. Free state conformational sampling of the SAM-I riboswitch aptamer domain. Structure 18, 787-797 (2010).
-
(2010)
Structure
, vol.18
, pp. 787-797
-
-
Stoddard, C.D.1
-
14
-
-
77954758121
-
Multi-domain packing in the aminoacylatable 39 end of a plant viral RNA
-
Hammond, J. A., Rambo, R. P. & Kieft, J. S. Multi-domain packing in the aminoacylatable 39 end of a plant viral RNA. J. Mol. Biol. 399, 450-463 (2010).
-
(2010)
J. Mol. Biol
, vol.399
, pp. 450-463
-
-
Hammond, J.A.1
Rambo, R.P.2
Kieft, J.S.3
-
15
-
-
0034484513
-
SAXS experiments on absolute scale with Kratky systems using water as a secondary standard
-
Orthaber, D., Bergmann, A. & Glatter, O. SAXS experiments on absolute scale with Kratky systems using water as a secondary standard. J. Appl. Crystallogr. 33, 218-225 (2000).
-
(2000)
J. Appl. Crystallogr
, vol.33
, pp. 218-225
-
-
Orthaber, D.1
Bergmann, A.2
Glatter, O.3
-
16
-
-
34248397195
-
Accuracy ofmolecular mass determination of proteins in solution by small-angle X-ray scattering
-
Mylonas, E. & Svergun, D. I. Accuracy ofmolecular mass determination of proteins in solution by small-angle X-ray scattering. J. Appl. Crystallogr. 40, s245-s249 (2007).
-
(2007)
J. Appl. Crystallogr
, vol.40
-
-
Mylonas, E.1
Svergun, D.I.2
-
17
-
-
75649147383
-
Determination of the molecular weight of proteins in solution from a single smallangle X-ray scattering measurement on a relative scale
-
Fischer, H., de Oliveira Neto, M., Napolitano, H. B., Polikarpov, I. & Craievich, A. F. Determination of the molecular weight of proteins in solution from a single smallangle X-ray scattering measurement on a relative scale. J. Appl. Crystallogr. 43, 101-109 (2010).
-
(2010)
J. Appl. Crystallogr
, vol.43
, pp. 101-109
-
-
Fischer, H.1
De Oliveira Neto, M.2
Napolitano, H.B.3
Polikarpov, I.4
Craievich, A.F.5
-
18
-
-
79958045453
-
Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law
-
Rambo, R. P. & Tainer, J. A. Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law. Biopolymers 95, 559-571 (2011).
-
(2011)
Biopolymers
, vol.95
, pp. 559-571
-
-
Rambo, R.P.1
Tainer, J.A.2
-
19
-
-
0033954256
-
The protein data bank
-
Berman, H. M. et al.The Protein DataBank.Nucleic Acids Res.28, 235-242(2000).
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
-
20
-
-
0027498262
-
Light scattering and the absolute characterization of macromolecules
-
Wyatt, P. J. Light scattering and the absolute characterization of macromolecules. Anal. Chim. Acta 272, 1-40 (1993).
-
(1993)
Anal. Chim. Acta
, vol.272
, pp. 1-40
-
-
Wyatt, P.J.1
-
21
-
-
0029185933
-
CRYSOL-A program to evaluate X-ray solution scattering of biologicalmacromolecules fromatomic coordinates
-
Svergun, D., Barberato, C. & Koch, M. H. J. CRYSOL-a program to evaluate X-ray solution scattering of biologicalmacromolecules fromatomic coordinates. J. Appl. Crystallogr. 28, 768-773 (1995).
-
(1995)
J. Appl. Crystallogr
, vol.28
, pp. 768-773
-
-
Svergun, D.1
Barberato, C.2
Koch, M.H.J.3
-
22
-
-
77954280480
-
A web server for rapid computation and fitting of SAXS profiles
-
Schneidman-Duhovny, D., Hammel, M. & Sali, A. FoXS: a web server for rapid computation and fitting of SAXS profiles. Nucleic Acids Res. 38, W540-W544 (2010).
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Schneidman-Duhovny, D.1
Hammel, M.2
Foxs, S.A.3
-
23
-
-
0026597444
-
FreeR value: A novel statistical quantity for assessing the accuracy of crystal structures
-
Bruger, A. T. FreeR value: a novel statistical quantity for assessing the accuracy of crystal structures. Nature 355, 472-475 (1992).
-
(1992)
Nature
, vol.355
, pp. 472-475
-
-
Bruger, A.T.1
-
24
-
-
0027918891
-
Assessing the quality of solution nuclear magnetic resonance structures by complete crossvalidation
-
Bruger, A. T., Clore, G. M., Gronenborn, A. M., Saffrich, R.&Nilges, M. Assessing the quality of solution nuclear magnetic resonance structures by complete crossvalidation. Science 261, 328-331 (1993).
-
(1993)
Science
, vol.261
, pp. 328-331
-
-
Bruger, A.T.1
Clore, G.M.2
Gronenborn, A.M.3
Saffrich, R.4
Nilges, M.5
-
26
-
-
33845578994
-
Toward robust distance metric analysis for similarity estimation
-
Jie, Y., Qi, T., Amores, J. & Sebe, N. Toward Robust Distance Metric Analysis for Similarity Estimation (IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2006).
-
(2006)
IEEE Computer Society Conference on Computer Vision and Pattern Recognition
-
-
Jie, Y.1
Qi, T.2
Amores, J.3
Sebe, N.4
-
27
-
-
84861425552
-
Linking crystallographic model and data quality
-
Karplus, P. A. & Diederichs, K. Linking crystallographic model and data quality. Science 336, 1030-1033 (2012).
-
(2012)
Science
, vol.336
, pp. 1030-1033
-
-
Karplus, P.A.1
Diederichs, K.2
-
28
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Bruger, A. T. et al. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D 54, 905-921 (1998).
-
(1998)
Acta Crystallogr
, vol.D 54
, pp. 905-921
-
-
Bruger, A.T.1
-
29
-
-
0030931612
-
Prediction of protein conformational freedom from distance constraints
-
de Groot, B. L. et al. Prediction of protein conformational freedom from distance constraints. Proteins 29, 240-251 (1997).
-
(1997)
Proteins
, vol.29
, pp. 240-251
-
-
De Groot, B.L.1
-
30
-
-
2542540696
-
Assembly of an active group II intron-maturase complex by protein dimerization
-
Rambo, R. P. & Doudna, J. A. Assembly of an active group II intron-maturase complex by protein dimerization. Biochemistry 43, 6486-6497 (2004).
-
(2004)
Biochemistry
, vol.43
, pp. 6486-6497
-
-
Rambo, R.P.1
Doudna, J.A.2
-
31
-
-
84055212199
-
Structural architecture of an RNA that competitively inhibits RNase L
-
Keel, A. Y., Jha, B. K. & Kieft, J. S. Structural architecture of an RNA that competitively inhibits RNase L. RNA 18, 88-89 (2012).
-
(2012)
RNA
, vol.18
, pp. 88-89
-
-
Keel, A.Y.1
Jha, B.K.2
Kieft, J.S.3
-
32
-
-
44849090619
-
Analyzing the flexibility of RNA structures by constraint counting
-
Fulle, S. & Gohlke, H. Analyzing the flexibility of RNA structures by constraint counting. Biophys. J. 94, 4202-4219 (2008).
-
(2008)
Biophys. J
, vol.94
, pp. 4202-4219
-
-
Fulle, S.1
Gohlke, H.2
|