메뉴 건너뛰기




Volumn 5, Issue 12, 2013, Pages

MiR-638 regulates gene expression networks associated with emphysematous lung destruction

Author keywords

[No Author keywords available]

Indexed keywords


EID: 84891354115     PISSN: None     EISSN: 1756994X     Source Type: Journal    
DOI: 10.1186/gm519     Document Type: Article
Times cited : (62)

References (53)
  • 1
    • 34548222188 scopus 로고    scopus 로고
    • Global burden of COPD: risk factors, prevalence, and future trends
    • 10.1016/S0140-6736(07)61380-4, 17765526
    • Mannino DM, Buist AS. Global burden of COPD: risk factors, prevalence, and future trends. Lancet 2007, 370:765-773. 10.1016/S0140-6736(07)61380-4, 17765526.
    • (2007) Lancet , vol.370 , pp. 765-773
    • Mannino, D.M.1    Buist, A.S.2
  • 2
    • 36249018965 scopus 로고    scopus 로고
    • Phenotypes of chronic obstructive pulmonary disease
    • 10.1080/15412550701629663, 18027163
    • Friedlander AL, Lynch D, Dyar LA, Bowler RP. Phenotypes of chronic obstructive pulmonary disease. COPD 2007, 4:355-384. 10.1080/15412550701629663, 18027163.
    • (2007) COPD , vol.4 , pp. 355-384
    • Friedlander, A.L.1    Lynch, D.2    Dyar, L.A.3    Bowler, R.P.4
  • 3
    • 1842552109 scopus 로고    scopus 로고
    • Standards for the diagnosis and treatment of patients with COPD: a summary of the ATS/ERS position paper
    • 10.1183/09031936.04.00014304, 15219010, ATS/ERS Task Force
    • Celli BR, MacNee W, ATS/ERS Task Force Standards for the diagnosis and treatment of patients with COPD: a summary of the ATS/ERS position paper. Eur Respir J 2004, 23:932-946. 10.1183/09031936.04.00014304, 15219010, ATS/ERS Task Force.
    • (2004) Eur Respir J , vol.23 , pp. 932-946
    • Celli, B.R.1    MacNee, W.2
  • 5
    • 36049019384 scopus 로고    scopus 로고
    • Characterization of phenotypes based on severity of emphysema in chronic obstructive pulmonary disease
    • 10.1136/thx.2006.072777, 2117136, 17573447, Cohort Study Group
    • Makita H, Nasuhara Y, Nagai K, Ito Y, Hasegawa M, Betsuyaku T, Onodera Y, Hizawa N, Nishimura M, Hokkaido COPD, Cohort Study Group Characterization of phenotypes based on severity of emphysema in chronic obstructive pulmonary disease. Thorax 2007, 62:932-937. 10.1136/thx.2006.072777, 2117136, 17573447, Cohort Study Group.
    • (2007) Thorax , vol.62 , pp. 932-937
    • Makita, H.1    Nasuhara, Y.2    Nagai, K.3    Ito, Y.4    Hasegawa, M.5    Betsuyaku, T.6    Onodera, Y.7    Hizawa, N.8    Nishimura, M.9    Hokkaido, C.O.P.D.10
  • 6
    • 76249090636 scopus 로고    scopus 로고
    • Expression profiling identifies genes involved in emphysema severity
    • 10.1186/1465-9921-10-81, 2746189, 19723343
    • Francis SM, Larsen JE, Pavey SJ, Bowman RV, Hayward NK, Fong KM, Yang IA. Expression profiling identifies genes involved in emphysema severity. Respir Res 2009, 10:81. 10.1186/1465-9921-10-81, 2746189, 19723343.
    • (2009) Respir Res , vol.10 , pp. 81
    • Francis, S.M.1    Larsen, J.E.2    Pavey, S.J.3    Bowman, R.V.4    Hayward, N.K.5    Fong, K.M.6    Yang, I.A.7
  • 9
    • 33747827227 scopus 로고    scopus 로고
    • Comprehensive analysis of gene expression on GOLD-2 versus GOLD-0 smokers reveals novel genes important in the pathogenesis of COPD
    • 10.1513/pats.200603-031MS, 16921106
    • Ning W, Lee J, Kaminski N, Feghali-Bostwick CA, Watkins SC, Pilewski JM, Peters DG, Hogg JC, Choi AM. Comprehensive analysis of gene expression on GOLD-2 versus GOLD-0 smokers reveals novel genes important in the pathogenesis of COPD. Proc Am Thorac Soc 2006, 3:466. 10.1513/pats.200603-031MS, 16921106.
    • (2006) Proc Am Thorac Soc , vol.3 , pp. 466
    • Ning, W.1    Lee, J.2    Kaminski, N.3    Feghali-Bostwick, C.A.4    Watkins, S.C.5    Pilewski, J.M.6    Peters, D.G.7    Hogg, J.C.8    Choi, A.M.9
  • 10
    • 3042719079 scopus 로고    scopus 로고
    • Effects of cigarette smoke on the human airway epithelial cell transcriptome
    • 10.1073/pnas.0401422101, 454179, 15210990
    • Spira A, Beane J, Shah V, Liu G, Schembri F, Yang X, Palma J, Brody JS. Effects of cigarette smoke on the human airway epithelial cell transcriptome. Proc Natl Acad Sci U S A 2004, 101:10143-10148. 10.1073/pnas.0401422101, 454179, 15210990.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 10143-10148
    • Spira, A.1    Beane, J.2    Shah, V.3    Liu, G.4    Schembri, F.5    Yang, X.6    Palma, J.7    Brody, J.S.8
  • 17
    • 58249088751 scopus 로고    scopus 로고
    • MicroRNAs: target recognition and regulatory functions
    • 10.1016/j.cell.2009.01.002, 3794896, 19167326
    • Bartel DP. MicroRNAs: target recognition and regulatory functions. Cell 2009, 136:215-233. 10.1016/j.cell.2009.01.002, 3794896, 19167326.
    • (2009) Cell , vol.136 , pp. 215-233
    • Bartel, D.P.1
  • 18
    • 84866879941 scopus 로고    scopus 로고
    • Molecular network analysis of human microRNA targetome: from cancers to Alzheimer's disease
    • 17-0381-5-17
    • Satoh J. Molecular network analysis of human microRNA targetome: from cancers to Alzheimer's disease. BioData Min 2012, 5. 17-0381-5-17.
    • (2012) BioData Min , vol.5
    • Satoh, J.1
  • 19
    • 34249819336 scopus 로고    scopus 로고
    • MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals
    • 10.1016/j.molcel.2007.05.018, 2072999, 17560377
    • Tsang J, Zhu J, van Oudenaarden A. MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals. Mol Cell 2007, 26:753-767. 10.1016/j.molcel.2007.05.018, 2072999, 17560377.
    • (2007) Mol Cell , vol.26 , pp. 753-767
    • Tsang, J.1    Zhu, J.2    van Oudenaarden, A.3
  • 21
    • 84871346487 scopus 로고    scopus 로고
    • Clinical applications of microRNAs in cancer
    • 10.1038/clpt.2012.192, 23212103
    • Nana-Sinkam SP, Croce CM. Clinical applications of microRNAs in cancer. Clin Pharmacol Ther 2013, 93:98-104. 10.1038/clpt.2012.192, 23212103.
    • (2013) Clin Pharmacol Ther , vol.93 , pp. 98-104
    • Nana-Sinkam, S.P.1    Croce, C.M.2
  • 24
    • 4544341015 scopus 로고    scopus 로고
    • Linear models and empirical bayes methods for assessing differential expression in microarray experiments
    • Article3
    • Smyth GK. Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat Appl Genet Mol Biol 2004, 3:Article3.
    • (2004) Stat Appl Genet Mol Biol , vol.3
    • Smyth, G.K.1
  • 26
    • 0142121516 scopus 로고    scopus 로고
    • Exploration, normalization, and summaries of high density oligonucleotide array probe level data
    • 10.1093/biostatistics/4.2.249, 12925520
    • Irizarry RA, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 2003, 4:249-264. 10.1093/biostatistics/4.2.249, 12925520.
    • (2003) Biostatistics , vol.4 , pp. 249-264
    • Irizarry, R.A.1    Hobbs, B.2    Collin, F.3    Beazer-Barclay, Y.D.4    Antonellis, K.J.5    Scherf, U.6    Speed, T.P.7
  • 28
    • 33847259379 scopus 로고    scopus 로고
    • Nlme: linear and nonlinear mixed effects models
    • Vienna, Austria: R Foundation for Statistical Computing, 3:1-104
    • Pinheiro J, Bates D, DebRoy S, Sarkar D. Nlme: linear and nonlinear mixed effects models. R package version 3 2008, Vienna, Austria: R Foundation for Statistical Computing, 3:1-104.
    • (2008) R package version 3
    • Pinheiro, J.1    Bates, D.2    DebRoy, S.3    Sarkar, D.4
  • 29
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Statist Soc B 1995, 57:289-300.
    • (1995) J R Statist Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 30
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • 10.1016/j.cell.2004.12.035, 15652477
    • Lewis BP, Burge CB, Bartel DP. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 2005, 120:15-20. 10.1016/j.cell.2004.12.035, 15652477.
    • (2005) Cell , vol.120 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 31
    • 1542297345 scopus 로고    scopus 로고
    • Computational identification of microRNA targets
    • 10.1016/j.ydbio.2003.12.003, 15013811
    • Rajewsky N, Socci ND. Computational identification of microRNA targets. Dev Biol 2004, 267:529-535. 10.1016/j.ydbio.2003.12.003, 15013811.
    • (2004) Dev Biol , vol.267 , pp. 529-535
    • Rajewsky, N.1    Socci, N.D.2
  • 33
    • 31044444975 scopus 로고    scopus 로고
    • TarBase: a comprehensive database of experimentally supported animal microRNA targets
    • 1370898, 16373484
    • Sethupathy P, Corda B, Hatzigeorgiou AG. TarBase: a comprehensive database of experimentally supported animal microRNA targets. RNA 2006, 12:192-197. 1370898, 16373484.
    • (2006) RNA , vol.12 , pp. 192-197
    • Sethupathy, P.1    Corda, B.2    Hatzigeorgiou, A.G.3
  • 36
    • 84874664707 scopus 로고    scopus 로고
    • The Molecular Signature Database
    • The Molecular Signature Database. [http://www.broadinstitute.org/gsea/msigdb/index.jsp].
  • 39
    • 69249228684 scopus 로고    scopus 로고
    • Stepwise up-regulation of microRNA expression levels from replicating to reversible and irreversible growth arrest states in WI-38 human fibroblasts
    • 10.1002/jcp.21834, 19475566
    • Maes OC, Sarojini H, Wang E. Stepwise up-regulation of microRNA expression levels from replicating to reversible and irreversible growth arrest states in WI-38 human fibroblasts. J Cell Physiol 2009, 221:109-119. 10.1002/jcp.21834, 19475566.
    • (2009) J Cell Physiol , vol.221 , pp. 109-119
    • Maes, O.C.1    Sarojini, H.2    Wang, E.3
  • 40
    • 29144505309 scopus 로고    scopus 로고
    • The widespread impact of mammalian MicroRNAs on mRNA repression and evolution
    • 10.1126/science.1121158, 16308420
    • Farh KK, Grimson A, Jan C, Lewis BP, Johnston WK, Lim LP, Burge CB, Bartel DP. The widespread impact of mammalian MicroRNAs on mRNA repression and evolution. Science 2005, 310:1817-1821. 10.1126/science.1121158, 16308420.
    • (2005) Science , vol.310 , pp. 1817-1821
    • Farh, K.K.1    Grimson, A.2    Jan, C.3    Lewis, B.P.4    Johnston, W.K.5    Lim, L.P.6    Burge, C.B.7    Bartel, D.P.8
  • 41
    • 18044377963 scopus 로고    scopus 로고
    • Principles of microRNA-target recognition
    • 10.1371/journal.pbio.0030085, 1043860, 15723116
    • Brennecke J, Stark A, Russell RB, Cohen SM. Principles of microRNA-target recognition. PLoS Biol 2005, 3:e85. 10.1371/journal.pbio.0030085, 1043860, 15723116.
    • (2005) PLoS Biol , vol.3
    • Brennecke, J.1    Stark, A.2    Russell, R.B.3    Cohen, S.M.4
  • 44
    • 79952289884 scopus 로고    scopus 로고
    • A curated database of miRNA mediated feed-forward loops involving MYC as master regulator
    • 10.1371/journal.pone.0014742, 3048388, 21390222
    • El Baroudi M, Cora D, Bosia C, Osella M, Caselle M. A curated database of miRNA mediated feed-forward loops involving MYC as master regulator. PLoS One 2011, 6:e14742. 10.1371/journal.pone.0014742, 3048388, 21390222.
    • (2011) PLoS One , vol.6
    • El Baroudi, M.1    Cora, D.2    Bosia, C.3    Osella, M.4    Caselle, M.5
  • 45
    • 79952302623 scopus 로고    scopus 로고
    • The role of incoherent microRNA-mediated feedforward loops in noise buffering
    • 10.1371/journal.pcbi.1001101, 3053320, 21423718
    • Osella M, Bosia C, Cora D, Caselle M. The role of incoherent microRNA-mediated feedforward loops in noise buffering. PLoS Comput Biol 2011, 7:e1001101. 10.1371/journal.pcbi.1001101, 3053320, 21423718.
    • (2011) PLoS Comput Biol , vol.7
    • Osella, M.1    Bosia, C.2    Cora, D.3    Caselle, M.4
  • 46
    • 79957579613 scopus 로고    scopus 로고
    • Characterizing the role of miRNAs within gene regulatory networks using integrative genomics techniques
    • 3130556, 21613979
    • Su WL, Kleinhanz RR, Schadt EE. Characterizing the role of miRNAs within gene regulatory networks using integrative genomics techniques. Mol Syst Biol 2011, 7:490. 3130556, 21613979.
    • (2011) Mol Syst Biol , vol.7 , pp. 490
    • Su, W.L.1    Kleinhanz, R.R.2    Schadt, E.E.3
  • 47
    • 79951679556 scopus 로고    scopus 로고
    • Is the aging process accelerated in chronic obstructive pulmonary disease?
    • 10.1097/MCP.0b013e328341cead, 21365793
    • Lee J, Sandford A, Man P, Sin DD. Is the aging process accelerated in chronic obstructive pulmonary disease?. Curr Opin Pulm Med 2011, 17:90-97. 10.1097/MCP.0b013e328341cead, 21365793.
    • (2011) Curr Opin Pulm Med , vol.17 , pp. 90-97
    • Lee, J.1    Sandford, A.2    Man, P.3    Sin, D.D.4
  • 49
    • 48149109243 scopus 로고    scopus 로고
    • Aging and induced senescence as factors in the pathogenesis of lung emphysema
    • 10.1016/j.rmed.2008.04.013, 18617381
    • Karrasch S, Holz O, Jorres RA. Aging and induced senescence as factors in the pathogenesis of lung emphysema. Respir Med 2008, 102:1215-1230. 10.1016/j.rmed.2008.04.013, 18617381.
    • (2008) Respir Med , vol.102 , pp. 1215-1230
    • Karrasch, S.1    Holz, O.2    Jorres, R.A.3
  • 51
    • 0034626735 scopus 로고    scopus 로고
    • Oxidants, oxidative stress and the biology of ageing
    • 10.1038/35041687, 11089981
    • Finkel T, Holbrook NJ. Oxidants, oxidative stress and the biology of ageing. Nature 2000, 408:239-247. 10.1038/35041687, 11089981.
    • (2000) Nature , vol.408 , pp. 239-247
    • Finkel, T.1    Holbrook, N.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.