-
1
-
-
0026693776
-
Myc family oncoproteins function through a common pathway to transform normal cells in culture: cross-interference by Max and trans-acting dominant mutants
-
Mukherjee B, Morgenbesser SD, DePinho R, (1992) Myc family oncoproteins function through a common pathway to transform normal cells in culture: cross-interference by Max and trans-acting dominant mutants. Genes Dev 6: 1480-1492.
-
(1992)
Genes Dev
, vol.6
, pp. 1480-1492
-
-
Mukherjee, B.1
Morgenbesser, S.D.2
DePinho, R.3
-
2
-
-
23144464363
-
Transcriptional regulation and transformation by Myc proteins
-
Adhikary S, Eilers M, (2005) Transcriptional regulation and transformation by Myc proteins. Nat Rev Mol Cell Biol 6: 635-645.
-
(2005)
Nat Rev Mol Cell Biol
, vol.6
, pp. 635-645
-
-
Adhikary, S.1
Eilers, M.2
-
3
-
-
44649117905
-
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
-
Chen X, Xu H, Yuan P, Fang F, Huss M, et al. (2008) Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133: 1106-1117.
-
(2008)
Cell
, vol.133
, pp. 1106-1117
-
-
Chen, X.1
Xu, H.2
Yuan, P.3
Fang, F.4
Huss, M.5
-
4
-
-
57649228521
-
Stat3 and c-Myc Genome-Wide Promoter Occupancy in Embryonic Stem Cells
-
Kidder BL, Yang J, Palmer S, (2008) Stat3 and c-Myc Genome-Wide Promoter Occupancy in Embryonic Stem Cells. PLoS ONE 3: e3932.
-
(2008)
PLoS ONE
, vol.3
-
-
Kidder, B.L.1
Yang, J.2
Palmer, S.3
-
5
-
-
0036192061
-
The myc oncogene: Marvelously complex
-
Oster SK, Ho CS, Soucie EL, Penn LZ, (2002) The myc oncogene: Marvelously complex. Adv Cancer Res 84: 81-154.
-
(2002)
Adv Cancer Res
, vol.84
, pp. 81-154
-
-
Oster, S.K.1
Ho, C.S.2
Soucie, E.L.3
Penn, L.Z.4
-
6
-
-
33845187907
-
Global mapping of c-Myc binding sites and target gene networks in human B cells
-
Zeller KI, Zhao X, Lee CW, Chiu KP, Yao F, et al. (2006) Global mapping of c-Myc binding sites and target gene networks in human B cells. Proc Natl Acad Sci U S A 103: 17834-17839.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 17834-17839
-
-
Zeller, K.I.1
Zhao, X.2
Lee, C.W.3
Chiu, K.P.4
Yao, F.5
-
7
-
-
49749084410
-
Functional integration of microRNAs into oncogenic and tumor suppressor pathways
-
Lotterman CD, Kent OA, Mendell JT, (2008) Functional integration of microRNAs into oncogenic and tumor suppressor pathways. Cell Cycle 7: 2493-2499.
-
(2008)
Cell Cycle
, vol.7
, pp. 2493-2499
-
-
Lotterman, C.D.1
Kent, O.A.2
Mendell, J.T.3
-
8
-
-
49749150573
-
microRNAs and cancer: an overview
-
Medina PP, Slack FJ, (2008) microRNAs and cancer: an overview. Cell Cycle 7: 2485-2492.
-
(2008)
Cell Cycle
, vol.7
, pp. 2485-2492
-
-
Medina, P.P.1
Slack, F.J.2
-
9
-
-
65949090276
-
MicroRNA Gene Networks in Oncogenesis
-
Drakaki A, Iliopoulos D, (2009) MicroRNA Gene Networks in Oncogenesis. Curr Genomics 10: 35-41.
-
(2009)
Curr Genomics
, vol.10
, pp. 35-41
-
-
Drakaki, A.1
Iliopoulos, D.2
-
10
-
-
84984765621
-
Canalization of development by microRNAs
-
Hornstein E, Shomron N, (2006) Canalization of development by microRNAs. Nat Genet 38: S6-S20.
-
(2006)
Nat Genet
, vol.38
-
-
Hornstein, E.1
Shomron, N.2
-
11
-
-
65449151411
-
The interplay between transcription factors and microRNAs in genome-scale regulatory networks
-
Martinez NJ, Walhout AJ, (2009) The interplay between transcription factors and microRNAs in genome-scale regulatory networks. Bioessays 31: 435-445.
-
(2009)
Bioessays
, vol.31
, pp. 435-445
-
-
Martinez, N.J.1
Walhout, A.J.2
-
12
-
-
70349334678
-
Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human
-
Re A, Cora' D, Taverna D, Caselle M, (2009) Genome-wide survey of microRNA-transcription factor feed-forward regulatory circuits in human. Mol BioSyst 5: 854-867.
-
(2009)
Mol BioSyst
, vol.5
, pp. 854-867
-
-
Re, A.1
Cora', D.2
Taverna, D.3
Caselle, M.4
-
13
-
-
34547555796
-
Global and local architecture of the mammalian microRNA-transcription factor regulatory network
-
Shalgi R, Lieber D, Oren M, Pipel Y, (2007) Global and local architecture of the mammalian microRNA-transcription factor regulatory network. PLoS Comput Biol 3: e131.
-
(2007)
PLoS Comput Biol
, vol.3
-
-
Shalgi, R.1
Lieber, D.2
Oren, M.3
Pipel, Y.4
-
14
-
-
42049105840
-
Dissecting microregulation of a master regulatory network
-
Sinha AU, Kaimal V, Chen J, Jegga AG, (2008) Dissecting microregulation of a master regulatory network. BMC Genomics 23: 9-88.
-
(2008)
BMC Genomics
, vol.23
, pp. 9-88
-
-
Sinha, A.U.1
Kaimal, V.2
Chen, J.3
Jegga, A.G.4
-
15
-
-
34249819336
-
MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals
-
Tsang J, Zhu J, van Oudenaarden A, (2007) MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals. Mol Cell 26: 753-767.
-
(2007)
Mol Cell
, vol.26
, pp. 753-767
-
-
Tsang, J.1
Zhu, J.2
van Oudenaarden, A.3
-
16
-
-
56649099271
-
Analysis of regulatory network topology reveals functionally distinct classes of microRNAs
-
Yu X, Lin J, Zack DJ, Mendell JT, Qian J, (2008) Analysis of regulatory network topology reveals functionally distinct classes of microRNAs. Nucleic Acids Res USA 36: 6494-6503.
-
(2008)
Nucleic Acids Res USA
, vol.36
, pp. 6494-6503
-
-
Yu, X.1
Lin, J.2
Zack, D.J.3
Mendell, J.T.4
Qian, J.5
-
17
-
-
79952302623
-
The role of incoherent microRNA-mediated feedforward loops in noise buffering
-
In press. Preprint available at
-
Osella M, Bosia C, Cora' D, Caselle M, (2011) The role of incoherent microRNA-mediated feedforward loops in noise buffering. PLoS Comput Biol In press. Preprint available athttp://arxiv.org/abs/1004.0336.
-
(2011)
PLoS Comput Biol
-
-
Osella, M.1
Bosia, C.2
Cora', D.3
Caselle, M.4
-
18
-
-
66049153398
-
Evolution under canalization and the dual roles of microRNAs: a hypothesis
-
Wu CI, Shen Y, Tang T, (2009) Evolution under canalization and the dual roles of microRNAs: a hypothesis. Genome Res 19: 734-43.
-
(2009)
Genome Res
, vol.19
, pp. 734-743
-
-
Wu, C.I.1
Shen, Y.2
Tang, T.3
-
19
-
-
75549092303
-
TransmiR: a transcription factor-microRNA regulation database
-
Wang J, Lu M, Qiu C, Cui Q, (2009) TransmiR: a transcription factor-microRNA regulation database. Nucleic Acids Res 1: 4.
-
(2009)
Nucleic Acids Res
, vol.1
, pp. 4
-
-
Wang, J.1
Lu, M.2
Qiu, C.3
Cui, Q.4
-
20
-
-
58149203235
-
The database of experimentally supported targets: a functional update of TarBase
-
Papadopoulos GL, Reczko M, Simossis VA, Sethupathy P, Hatzigeorgiou AG, (2009) The database of experimentally supported targets: a functional update of TarBase. Nucleic Acids Res 37: D155-D158.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Papadopoulos, G.L.1
Reczko, M.2
Simossis, V.A.3
Sethupathy, P.4
Hatzigeorgiou, A.G.5
-
21
-
-
58149186499
-
miRecords: an integrated resource for microRNA-target interactions
-
Xiao F, Zuo Z, Cai G, Kang S, Gao X, et al. (2009) miRecords: an integrated resource for microRNA-target interactions. Nucleic Acids Res 37: D105-D110.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Xiao, F.1
Zuo, Z.2
Cai, G.3
Kang, S.4
Gao, X.5
-
22
-
-
0842278571
-
An integrated database of genes responsive to the Myc oncogenic transcription factor: identification of direct genomic targets
-
Zeller KI, Jegga AG, Bruce J, Aronow BJ, Kathyrn A, et al. (2003) An integrated database of genes responsive to the Myc oncogenic transcription factor: identification of direct genomic targets. Genome Biology 4: R69.
-
(2003)
Genome Biology
, vol.4
-
-
Zeller, K.I.1
Jegga, A.G.2
Bruce, J.3
Aronow, B.J.4
Kathyrn, A.5
-
23
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using david bioinformatics resources
-
Huang DW, Sherman BT, Lempicki RA, (2009) Systematic and integrative analysis of large gene lists using david bioinformatics resources. Nat Protoc 4: 44-57.
-
(2009)
Nat Protoc
, vol.4
, pp. 44-57
-
-
Huang, D.W.1
Sherman, B.T.2
Lempicki, R.A.3
-
24
-
-
77956520986
-
CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse
-
Friard O, Re A, Taverna D, De Bortoli M, Corá D, (2010) CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse. BMC Bioinformatics 11: 435.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 435
-
-
Friard, O.1
Re, A.2
Taverna, D.3
de Bortoli, M.4
Corá, D.5
-
25
-
-
34250877841
-
A mammalian microRNA expression atlas based on small RNA library sequencing
-
Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, et al. (2007) A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 129: 1401-1414.
-
(2007)
Cell
, vol.129
, pp. 1401-1414
-
-
Landgraf, P.1
Rusu, M.2
Sheridan, R.3
Sewer, A.4
Iovino, N.5
-
26
-
-
20444479428
-
c-Myc-regulated microRNAs modulate E2F1 expression
-
O'Donnell KA, Wentzel EA, Zeller KI, Dang CV, Mendell JT, (2005) c-Myc-regulated microRNAs modulate E2F1 expression. Nature 435: 839-843.
-
(2005)
Nature
, vol.435
, pp. 839-843
-
-
O'Donnell, K.A.1
Wentzel, E.A.2
Zeller, K.I.3
Dang, C.V.4
Mendell, J.T.5
-
27
-
-
58149382580
-
MicroRNA regulation of a cancer network: consequences of the feedback loops involving miR-17-92, E2F, and Myc
-
Aguda BD, Kim Y, Piper-Hunter MG, Friedman A, Marsh CB, (2008) MicroRNA regulation of a cancer network: consequences of the feedback loops involving miR-17-92, E2F, and Myc. Proc Natl Acad Sci U S A 105: 19678-19683.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 19678-19683
-
-
Aguda, B.D.1
Kim, Y.2
Piper-Hunter, M.G.3
Friedman, A.4
Marsh, C.B.5
-
28
-
-
34548381748
-
"Myc'ed messages": myc induces transcription of E2F1 while inhibiting its translation via a microRNA polycistron
-
Coller HA, Forman JJ, Legesse-Miller A, (2007) "Myc'ed messages": myc induces transcription of E2F1 while inhibiting its translation via a microRNA polycistron. PLoS Genet 3: e146.
-
(2007)
PLoS Genet
, vol.3
-
-
Coller, H.A.1
Forman, J.J.2
Legesse-Miller, A.3
-
29
-
-
77953948708
-
Identification of the miR-106b~25 microRNA cluster as a proto-oncogenic PTEN-targeting intron that cooperates with its host gene MCM7 in transformation
-
Poliseno L, Salmena L, Riccardi L, Fornari A, Song MS, et al. (2010) Identification of the miR-106b~25 microRNA cluster as a proto-oncogenic PTEN-targeting intron that cooperates with its host gene MCM7 in transformation. Sci Signal 3: ra29.
-
(2010)
Sci Signal
, vol.3
-
-
Poliseno, L.1
Salmena, L.2
Riccardi, L.3
Fornari, A.4
Song, M.S.5
-
30
-
-
39849095077
-
E2F1-regulated microRNAs impair TGFbeta-dependent cell-cycle arrest and apoptosis in gastric cancer
-
Petrocca F, Visone R, Onelli MR, Shah MH, Nicoloso MS, et al. (2008) E2F1-regulated microRNAs impair TGFbeta-dependent cell-cycle arrest and apoptosis in gastric cancer. Cancer Cell 13: 272-286.
-
(2008)
Cancer Cell
, vol.13
, pp. 272-286
-
-
Petrocca, F.1
Visone, R.2
Onelli, M.R.3
Shah, M.H.4
Nicoloso, M.S.5
-
31
-
-
77953745129
-
Myc-induced microRNAs integrate Myc-mediated cell proliferation and cell fate
-
Kim JW, Mori S, Nevins JR, (2010) Myc-induced microRNAs integrate Myc-mediated cell proliferation and cell fate. Cancer Res 70: 4820-8.
-
(2010)
Cancer Res
, vol.70
, pp. 4820-4828
-
-
Kim, J.W.1
Mori, S.2
Nevins, J.R.3
-
32
-
-
77951765345
-
Subtle variations in Pten dose determine cancer susceptibility
-
Alimonti A, Carracedo A, Clohessy JG, Trotman LC, Nardella C, et al. (2010) Subtle variations in Pten dose determine cancer susceptibility. Nat Genet 42: 454-458.
-
(2010)
Nat Genet
, vol.42
, pp. 454-458
-
-
Alimonti, A.1
Carracedo, A.2
Clohessy, J.G.3
Trotman, L.C.4
Nardella, C.5
-
33
-
-
33144490646
-
A microRNA expression signature of human solid tumors defines cancer gene targets
-
Volinia S, Calin GA, Liu CG, Ambs S, Cimmino A, et al. (2006) A microRNA expression signature of human solid tumors defines cancer gene targets. Proc Natl Acad Sci USA 103: 2257-2261.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 2257-2261
-
-
Volinia, S.1
Calin, G.A.2
Liu, C.G.3
Ambs, S.4
Cimmino, A.5
|