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Volumn 3 SEP, Issue , 2013, Pages

HERV-K and LINE-1 DNA methylation and reexpression in urothelial carcinoma

Author keywords

Alu; DNA hypomethylation; HERV K; LINE 1; Retroelements; Urothelial carcinoma

Indexed keywords

HERV K PROTEIN; LINE 1 PROTEIN; PROTEIN; UNCLASSIFIED DRUG;

EID: 84891139346     PISSN: None     EISSN: 2234943X     Source Type: Journal    
DOI: 10.3389/fonc.2013.00255     Document Type: Article
Times cited : (43)

References (67)
  • 1
    • 84875745673 scopus 로고    scopus 로고
    • Interplay between the cancer genome and epigenome
    • doi: 10.1016/j.cell.2013.03.008
    • Shen H, Laird PW. Interplay between the cancer genome and epigenome. Cell (2013) 153:38-55. doi: 10.1016/j.cell.2013.03.008
    • (2013) Cell , vol.153 , pp. 38-55
    • Shen, H.1    Laird, P.W.2
  • 2
    • 33847065486 scopus 로고    scopus 로고
    • The epigenomics of cancer
    • doi:10.1016/j.cell.2007.01.029
    • Jones PA, Baylin SB. The epigenomics of cancer. Cell (2007) 128:683-92. doi:10.1016/j.cell.2007.01.029
    • (2007) Cell , vol.128 , pp. 683-692
    • Jones, P.A.1    Baylin, S.B.2
  • 3
    • 24744471011 scopus 로고    scopus 로고
    • Causes and consequences of DNA hypomethylation in human cancer
    • doi:10.1139/o05-036
    • Hoffmann MJ, Schulz WA. Causes and consequences of DNA hypomethylation in human cancer. Biochem Cell Biol (2005) 83:296-321. doi:10.1139/o05-036
    • (2005) Biochem Cell Biol , vol.83 , pp. 296-321
    • Hoffmann, M.J.1    Schulz, W.A.2
  • 5
    • 52949095077 scopus 로고    scopus 로고
    • Retrotransposons revisited: the restraint and rehabilitation of parasites
    • doi:10.1016/j.cell.2008.09.022
    • Goodier JL, Kazazian HH Jr. Retrotransposons revisited: the restraint and rehabilitation of parasites. Cell (2008) 135:23-35. doi:10.1016/j.cell.2008.09.022
    • (2008) Cell , vol.135 , pp. 23-35
    • Goodier, J.L.1    Kazazian Jr., H.H.2
  • 6
    • 33645319220 scopus 로고    scopus 로고
    • L1 retrotransposons in human cancers
    • doi:10.1155/JBB/2006/83672
    • Schulz WA. L1 retrotransposons in human cancers. J Biomed Biotechnol (2006) 2006:83672. doi:10.1155/JBB/2006/83672
    • (2006) J Biomed Biotechnol , vol.2006 , pp. 83672
    • Schulz, W.A.1
  • 7
    • 80053158287 scopus 로고    scopus 로고
    • Selective changes of retroelement expression in human prostate cancer
    • doi:10.1093/carcin/bgr181
    • Goering W, Ribarska T, Schulz WA. Selective changes of retroelement expression in human prostate cancer. Carcinogenesis (2011) 32:1484-92. doi:10.1093/carcin/bgr181
    • (2011) Carcinogenesis , vol.32 , pp. 1484-1492
    • Goering, W.1    Ribarska, T.2    Schulz, W.A.3
  • 8
    • 4644329189 scopus 로고    scopus 로고
    • Coordinate hypermethylation at specific genes in prostate carcinoma precedes LINE-1 hypomethylation
    • Florl AR, Steinhoff C, Muller M, Seifert HH, Hader C, Engers R, et al. Coordinate hypermethylation at specific genes in prostate carcinoma precedes LINE-1 hypomethylation. Br J Cancer (2004) 91:985-94.
    • (2004) Br J Cancer , vol.91 , pp. 985-994
    • Florl, A.R.1    Steinhoff, C.2    Muller, M.3    Seifert, H.H.4    Hader, C.5    Engers, R.6
  • 9
    • 0032987773 scopus 로고    scopus 로고
    • DNA methylation and expression of LINE-1 and HERV-K provirus sequences in urothelial and renal cell carcinomas
    • doi:10.1038/sj.bjc.6690524
    • Florl AR, Lower R, Schmitz-Drager BJ, Schulz WA. DNA methylation and expression of LINE-1 and HERV-K provirus sequences in urothelial and renal cell carcinomas. Br J Cancer (1999) 80:1312-21. doi:10.1038/sj.bjc.6690524
    • (1999) Br J Cancer , vol.80 , pp. 1312-1321
    • Florl, A.R.1    Lower, R.2    Schmitz-Drager, B.J.3    Schulz, W.A.4
  • 10
    • 77952414230 scopus 로고    scopus 로고
    • Hypomethylation of a LINE-1 promoter activates an alternate transcript of the MET oncogene in bladders with cancer
    • doi:10.1371/journal.pgen.1000917
    • Wolff EM, Byun HM, Han HF, Sharma S, Nichols PW, Siegmund KD, et al. Hypomethylation of a LINE-1 promoter activates an alternate transcript of the MET oncogene in bladders with cancer. PLoS Genet (2010) 6:e1000917. doi:10.1371/journal.pgen.1000917
    • (2010) PLoS Genet , vol.6
    • Wolff, E.M.1    Byun, H.M.2    Han, H.F.3    Sharma, S.4    Nichols, P.W.5    Siegmund, K.D.6
  • 11
    • 84863603809 scopus 로고    scopus 로고
    • Correlation of LINE-1 methylation levels in patient-matched buffy coat, serum, buccal cell, and bladder tumor tissue DNA samples
    • doi:10.1158/1055-9965.EPI-11-1030
    • van Bemmel D, Lenz P, Liao LM, Baris D, Sternberg LR, Warner A, et al. Correlation of LINE-1 methylation levels in patient-matched buffy coat, serum, buccal cell, and bladder tumor tissue DNA samples. Cancer Epidemiol Biomarkers Prev (2012) 21:1143-8. doi:10.1158/1055-9965.EPI-11-1030
    • (2012) Cancer Epidemiol Biomarkers Prev , vol.21 , pp. 1143-1148
    • van Bemmel, D.1    Lenz, P.2    Liao, L.M.3    Baris, D.4    Sternberg, L.R.5    Warner, A.6
  • 12
    • 56449110842 scopus 로고    scopus 로고
    • Identification of the HERV-K gag antigen in prostate cancer by SEREX using autologous patient serum and its immunogenicity
    • Ishida T, Obata Y, Ohara N, Matsushita H, Sato S, Uenaka A, et al. Identification of the HERV-K gag antigen in prostate cancer by SEREX using autologous patient serum and its immunogenicity. Cancer Immun (2008) 8:15.
    • (2008) Cancer Immun , vol.8 , pp. 15
    • Ishida, T.1    Obata, Y.2    Ohara, N.3    Matsushita, H.4    Sato, S.5    Uenaka, A.6
  • 13
    • 34547642493 scopus 로고    scopus 로고
    • Distinct classes of chromosomal rearrangements create oncogenic ETS gene fusions in prostate cancer
    • doi:10.1038/nature06024
    • Tomlins SA, Laxman B, Dhanasekaran SM, Helgeson BE, Cao X, Morris DS, et al. Distinct classes of chromosomal rearrangements create oncogenic ETS gene fusions in prostate cancer. Nature (2007) 448:595-9. doi:10.1038/nature06024
    • (2007) Nature , vol.448 , pp. 595-599
    • Tomlins, S.A.1    Laxman, B.2    Dhanasekaran, S.M.3    Helgeson, B.E.4    Cao, X.5    Morris, D.S.6
  • 14
  • 15
    • 2942642114 scopus 로고    scopus 로고
    • Digital expression profiles of human endogenous retroviral families in normal and cancerous tissues
    • Stauffer Y, Theiler G, Sperisen P, Lebedev Y, Jongeneel CV. Digital expression profiles of human endogenous retroviral families in normal and cancerous tissues. Cancer Immun (2004) 4:2.
    • (2004) Cancer Immun , vol.4 , pp. 2
    • Stauffer, Y.1    Theiler, G.2    Sperisen, P.3    Lebedev, Y.4    Jongeneel, C.V.5
  • 16
    • 0036792154 scopus 로고    scopus 로고
    • A human endogenous retroviral sequence encoding an antigen recognized on melanoma by cytolytic T lymphocytes
    • Schiavetti F, Thonnard J, Colau D, Boon T, Coulie PG. A human endogenous retroviral sequence encoding an antigen recognized on melanoma by cytolytic T lymphocytes. Cancer Res (2002) 62:5510-6.
    • (2002) Cancer Res , vol.62 , pp. 5510-5516
    • Schiavetti, F.1    Thonnard, J.2    Colau, D.3    Boon, T.4    Coulie, P.G.5
  • 17
    • 84870027169 scopus 로고    scopus 로고
    • Discovery of TP53 splice variants in two novel papillary urothelial cancer cell lines
    • doi:10.1007/s13402-012-0082-8
    • Koch A, Hatina J, Rieder H, Seifert HH, Huckenbeck W, Jankowiak F, et al. Discovery of TP53 splice variants in two novel papillary urothelial cancer cell lines. Cell Oncol (Dordr) (2012) 35:243-57. doi:10.1007/s13402-012-0082-8
    • (2012) Cell Oncol (Dordr) , vol.35 , pp. 243-257
    • Koch, A.1    Hatina, J.2    Rieder, H.3    Seifert, H.H.4    Huckenbeck, W.5    Jankowiak, F.6
  • 18
    • 67650456283 scopus 로고    scopus 로고
    • Integrated genomic and transcriptional analysis of the in vitro evolution of telomerase-immortalized urothelial cells (TERT-NHUC)
    • doi:10.1002/gcc.20672
    • Chapman EJ, Williams SV, Platt FM, Hurst CD, Chambers P, Roberts P, et al. Integrated genomic and transcriptional analysis of the in vitro evolution of telomerase-immortalized urothelial cells (TERT-NHUC). Genes Chromosomes Cancer (2009) 48:694-710. doi:10.1002/gcc.20672
    • (2009) Genes Chromosomes Cancer , vol.48 , pp. 694-710
    • Chapman, E.J.1    Williams, S.V.2    Platt, F.M.3    Hurst, C.D.4    Chambers, P.5    Roberts, P.6
  • 19
    • 34347271300 scopus 로고    scopus 로고
    • A new and reliable culture system for superficial low-grade urothelial carcinoma of the bladder
    • doi:10.1007/s00345-007-0166-7
    • Seifert HH, Meyer A, Cronauer MV, Hatina J, Muller M, Rieder H, et al. A new and reliable culture system for superficial low-grade urothelial carcinoma of the bladder. World J Urol (2007) 25:297-302. doi:10.1007/s00345-007-0166-7
    • (2007) World J Urol , vol.25 , pp. 297-302
    • Seifert, H.H.1    Meyer, A.2    Cronauer, M.V.3    Hatina, J.4    Muller, M.5    Rieder, H.6
  • 20
    • 0037229621 scopus 로고    scopus 로고
    • Activities of MAP-kinase pathways in normal uroepithelial cells and urothelial carcinoma cell lines
    • doi:10.1006/excr.2002.5647
    • Swiatkowski S, Seifert HH, Steinhoff C, Prior A, Thievessen I, Schliess F, et al. Activities of MAP-kinase pathways in normal uroepithelial cells and urothelial carcinoma cell lines. Exp Cell Res (2003) 282:48-57. doi:10.1006/excr.2002.5647
    • (2003) Exp Cell Res , vol.282 , pp. 48-57
    • Swiatkowski, S.1    Seifert, H.H.2    Steinhoff, C.3    Prior, A.4    Thievessen, I.5    Schliess, F.6
  • 21
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • doi:10.1093/nar/29.9.e45
    • Pfaffl MW. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res (2001) 29:e45. doi:10.1093/nar/29.9.e45
    • (2001) Nucleic Acids Res , vol.29
    • Pfaffl, M.W.1
  • 22
    • 57349138824 scopus 로고    scopus 로고
    • A cohort study of tumoral LINE-1 hypomethylation and prognosis in colon cancer
    • doi:10.1093/jnci/djn359
    • Ogino S, Nosho K, Kirkner GJ, Kawasaki T, Chan AT, Schernhammer ES, et al. A cohort study of tumoral LINE-1 hypomethylation and prognosis in colon cancer. J Natl Cancer Inst (2008) 100:1734-8. doi:10.1093/jnci/djn359
    • (2008) J Natl Cancer Inst , vol.100 , pp. 1734-1738
    • Ogino, S.1    Nosho, K.2    Kirkner, G.J.3    Kawasaki, T.4    Chan, A.T.5    Schernhammer, E.S.6
  • 23
    • 55349130961 scopus 로고    scopus 로고
    • DNA hypomethylation arises later in prostate cancer progression than CpG island hypermethylation and contributes to metastatic tumor heterogeneity
    • doi:10.1158/0008-5472.CAN-07-6088
    • Yegnasubramanian S, Haffner MC, Zhang Y, Gurel B, Cornish TC, Wu Z, et al. DNA hypomethylation arises later in prostate cancer progression than CpG island hypermethylation and contributes to metastatic tumor heterogeneity. Cancer Res (2008) 68:8954-67. doi:10.1158/0008-5472.CAN-07-6088
    • (2008) Cancer Res , vol.68 , pp. 8954-8967
    • Yegnasubramanian, S.1    Haffner, M.C.2    Zhang, Y.3    Gurel, B.4    Cornish, T.C.5    Wu, Z.6
  • 24
    • 77952712959 scopus 로고    scopus 로고
    • Epigenomic diversity of colorectal cancer indicated by LINE-1 methylation in a database of 869 tumors
    • doi:10.1186/1476-4598-9-125
    • Baba Y, Huttenhower C, Nosho K, Tanaka N, Shima K, Hazra A, et al. Epigenomic diversity of colorectal cancer indicated by LINE-1 methylation in a database of 869 tumors. Mol Cancer (2010) 9:125. doi:10.1186/1476-4598-9-125
    • (2010) Mol Cancer , vol.9 , pp. 125
    • Baba, Y.1    Huttenhower, C.2    Nosho, K.3    Tanaka, N.4    Shima, K.5    Hazra, A.6
  • 26
    • 70449107061 scopus 로고    scopus 로고
    • Isolation of cancer-specific chimeric transcripts induced by hypomethylation of the LINE-1 antisense promoter
    • doi:10.1016/j.ygeno.2009.08.013
    • Cruickshanks HA, Tufarelli C. Isolation of cancer-specific chimeric transcripts induced by hypomethylation of the LINE-1 antisense promoter. Genomics (2009) 94:397-406. doi:10.1016/j.ygeno.2009.08.013
    • (2009) Genomics , vol.94 , pp. 397-406
    • Cruickshanks, H.A.1    Tufarelli, C.2
  • 27
    • 0034999474 scopus 로고    scopus 로고
    • Antisense promoter of human L1 retrotransposon drives transcription of adjacent cellular genes
    • doi:10.1128/MCB.21.6.1973-1985.2001
    • Speek M. Antisense promoter of human L1 retrotransposon drives transcription of adjacent cellular genes. Mol Cell Biol (2001) 21:1973-85. doi:10.1128/MCB.21.6.1973-1985.2001
    • (2001) Mol Cell Biol , vol.21 , pp. 1973-1985
    • Speek, M.1
  • 28
    • 33747506490 scopus 로고    scopus 로고
    • Understanding urothelial carcinoma through cancer pathways
    • doi:10.1002/ijc.21852
    • Schulz WA. Understanding urothelial carcinoma through cancer pathways. Int J Cancer (2006) 119:1513-8. doi:10.1002/ijc.21852
    • (2006) Int J Cancer , vol.119 , pp. 1513-1518
    • Schulz, W.A.1
  • 29
    • 12344254880 scopus 로고    scopus 로고
    • Retrotransposition-competent human LINE-1 induces apoptosis in cancer cells with intact p53
    • doi:10.1155/S1110724304403131
    • Haoudi A, Semmes OJ, Mason JM, Cannon RE. Retrotransposition-competent human LINE-1 induces apoptosis in cancer cells with intact p53. J Biomed Biotechnol (2004) 2004:185-94. doi:10.1155/S1110724304403131
    • (2004) J Biomed Biotechnol , vol.2004 , pp. 185-194
    • Haoudi, A.1    Semmes, O.J.2    Mason, J.M.3    Cannon, R.E.4
  • 30
    • 70449098000 scopus 로고    scopus 로고
    • p53 responsive elements in human retrotransposons
    • doi:10.1038/onc.2009.246
    • Harris CR, Dewan A, Zupnick A, Normart R, Gabriel A, Prives C, et al. p53 responsive elements in human retrotransposons. Oncogene (2009) 28:3857-65. doi:10.1038/onc.2009.246
    • (2009) Oncogene , vol.28 , pp. 3857-3865
    • Harris, C.R.1    Dewan, A.2    Zupnick, A.3    Normart, R.4    Gabriel, A.5    Prives, C.6
  • 31
  • 32
    • 80052235999 scopus 로고    scopus 로고
    • Paired mutations abolish and restore the balanced annealing and melting activities of ORF1p that are required for LINE-1 retrotransposition
    • doi:10.1093/nar/gkr171
    • Evans JD, Peddigari S, Chaurasiya KR, Williams MC, Martin SL. Paired mutations abolish and restore the balanced annealing and melting activities of ORF1p that are required for LINE-1 retrotransposition. Nucleic Acids Res (2011) 39:5611-21. doi:10.1093/nar/gkr171
    • (2011) Nucleic Acids Res , vol.39 , pp. 5611-5621
    • Evans, J.D.1    Peddigari, S.2    Chaurasiya, K.R.3    Williams, M.C.4    Martin, S.L.5
  • 33
    • 84862507347 scopus 로고    scopus 로고
    • Active human retrotransposons: variation and disease
    • doi:10.1016/j.gde.2012.02.006
    • Hancks DC, Kazazian HH Jr. Active human retrotransposons: variation and disease. Curr Opin Genet Dev (2012) 22:191-203. doi:10.1016/j.gde.2012.02.006
    • (2012) Curr Opin Genet Dev , vol.22 , pp. 191-203
    • Hancks, D.C.1    Kazazian Jr., H.H.2
  • 34
    • 77953889472 scopus 로고    scopus 로고
    • Natural mutagenesis of human genomes by endogenous retrotransposons
    • doi:10.1016/j.cell.2010.05.020
    • Iskow RC, McCabe MT, Mills RE, Torene S, Pittard WS, Neuwald AF, et al. Natural mutagenesis of human genomes by endogenous retrotransposons. Cell (2010) 141:1253-61. doi:10.1016/j.cell.2010.05.020
    • (2010) Cell , vol.141 , pp. 1253-1261
    • Iskow, R.C.1    McCabe, M.T.2    Mills, R.E.3    Torene, S.4    Pittard, W.S.5    Neuwald, A.F.6
  • 35
    • 84865285978 scopus 로고    scopus 로고
    • Landscape of somatic retrotransposition in human cancers
    • doi:10.1126/science.1222077
    • Lee E, Iskow R, Yang L, Gokcumen O, Haseley P, Luquette LJ III, et al. Landscape of somatic retrotransposition in human cancers. Science (2012) 337:967-71. doi:10.1126/science.1222077
    • (2012) Science , vol.337 , pp. 967-971
    • Lee, E.1    Iskow, R.2    Yang, L.3    Gokcumen, O.4    Haseley, P.5    Luquette I.I.I, L.J.6
  • 36
    • 84857782508 scopus 로고    scopus 로고
    • Pathogenic orphan transduction created by a nonreference LINE-1 retrotransposon
    • doi:10.1002/humu.21663
    • Solyom S, Ewing AD, Hancks DC, Takeshima Y, Awano H, Matsuo M, et al. Pathogenic orphan transduction created by a nonreference LINE-1 retrotransposon. Hum Mutat (2012) 33:369-71. doi:10.1002/humu.21663
    • (2012) Hum Mutat , vol.33 , pp. 369-371
    • Solyom, S.1    Ewing, A.D.2    Hancks, D.C.3    Takeshima, Y.4    Awano, H.5    Matsuo, M.6
  • 37
    • 84875698271 scopus 로고    scopus 로고
    • Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma
    • doi:10.1016/j.cell.2013.02.032
    • Shukla R, Upton KR, Munoz-Lopez M, Gerhardt DJ, Fisher ME, Nguyen T, et al. Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma. Cell (2013) 153:101-11. doi:10.1016/j.cell.2013.02.032
    • (2013) Cell , vol.153 , pp. 101-111
    • Shukla, R.1    Upton, K.R.2    Munoz-Lopez, M.3    Gerhardt, D.J.4    Fisher, M.E.5    Nguyen, T.6
  • 38
    • 50549099314 scopus 로고    scopus 로고
    • Expression patterns of transcribed human endogenous retrovirus HERV-K(HML-2) loci in human tissues and the need for a HERV Transcriptome Project
    • doi:10.1186/1471-2164-9-354
    • Flockerzi A, Ruggieri A, Frank O, Sauter M, Maldener E, Kopper B, et al. Expression patterns of transcribed human endogenous retrovirus HERV-K(HML-2) loci in human tissues and the need for a HERV Transcriptome Project. BMC Genomics (2008) 9:354. doi:10.1186/1471-2164-9-354
    • (2008) BMC Genomics , vol.9 , pp. 354
    • Flockerzi, A.1    Ruggieri, A.2    Frank, O.3    Sauter, M.4    Maldener, E.5    Kopper, B.6
  • 39
    • 48649083286 scopus 로고    scopus 로고
    • Human endogenous retrovirus K triggers an antigen-specific immune response in breast cancer patients
    • doi:10.1158/0008-5472.CAN-07-6838
    • Wang-Johanning F, Radvanyi L, Rycaj K, Plummer JB, Yan P, Sastry KJ, et al. Human endogenous retrovirus K triggers an antigen-specific immune response in breast cancer patients. Cancer Res (2008) 68:5869-77. doi:10.1158/0008-5472.CAN-07-6838
    • (2008) Cancer Res , vol.68 , pp. 5869-5877
    • Wang-Johanning, F.1    Radvanyi, L.2    Rycaj, K.3    Plummer, J.B.4    Yan, P.5    Sastry, K.J.6
  • 40
    • 71049148050 scopus 로고    scopus 로고
    • Expression profiling of repetitive elements by melting temperature analysis: variation in HERV-W gag expression across human individuals and tissues
    • doi:10.1186/1471-2164-10-532
    • Nellaker C, Li F, Uhrzander F, Tyrcha J, Karlsson H. Expression profiling of repetitive elements by melting temperature analysis: variation in HERV-W gag expression across human individuals and tissues. BMC Genomics (2009) 10:532. doi:10.1186/1471-2164-10-532
    • (2009) BMC Genomics , vol.10 , pp. 532
    • Nellaker, C.1    Li, F.2    Uhrzander, F.3    Tyrcha, J.4    Karlsson, H.5
  • 41
    • 84863177511 scopus 로고    scopus 로고
    • Immunotherapeutic potential of anti-human endogenous retrovirus-K envelope protein antibodies in targeting breast tumors
    • doi:10.1093/jnci/djr540
    • Wang-Johanning F, Rycaj K, Plummer JB, Li M, Yin B, Frerich K, et al. Immunotherapeutic potential of anti-human endogenous retrovirus-K envelope protein antibodies in targeting breast tumors. J Natl Cancer Inst (2012) 104:189-210. doi:10.1093/jnci/djr540
    • (2012) J Natl Cancer Inst , vol.104 , pp. 189-210
    • Wang-Johanning, F.1    Rycaj, K.2    Plummer, J.B.3    Li, M.4    Yin, B.5    Frerich, K.6
  • 42
    • 0035797901 scopus 로고    scopus 로고
    • Insertional polymorphisms of full-length endogenous retroviruses in humans
    • doi:10.1016/S0960-9822(01)00455-9
    • Turner G, Barbulescu M, Su M, Jensen-Seaman MI, Kidd KK, Lenz J. Insertional polymorphisms of full-length endogenous retroviruses in humans. Curr Biol (2001) 11:1531-5. doi:10.1016/S0960-9822(01)00455-9
    • (2001) Curr Biol , vol.11 , pp. 1531-1535
    • Turner, G.1    Barbulescu, M.2    Su, M.3    Jensen-Seaman, M.I.4    Kidd, K.K.5    Lenz, J.6
  • 43
    • 23244460443 scopus 로고    scopus 로고
    • The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease
    • doi:10.1016/j.ygeno.2005.06.004
    • Moyes DL, Martin A, Sawcer S, Temperton N, Worthington J, Griffiths DJ, et al. The distribution of the endogenous retroviruses HERV-K113 and HERV-K115 in health and disease. Genomics (2005) 86:337-41. doi:10.1016/j.ygeno.2005.06.004
    • (2005) Genomics , vol.86 , pp. 337-341
    • Moyes, D.L.1    Martin, A.2    Sawcer, S.3    Temperton, N.4    Worthington, J.5    Griffiths, D.J.6
  • 44
    • 41449090386 scopus 로고    scopus 로고
    • HERV-K113 is not associated with multiple sclerosis in a large family-based study
    • doi:10.1089/aid.2007.0196
    • Moyes DL, Goris A, Ban M, Compston A, Griffiths DJ, Sawcer S, et al. HERV-K113 is not associated with multiple sclerosis in a large family-based study. AIDS Res Hum Retroviruses (2008) 24:363-5. doi:10.1089/aid.2007.0196
    • (2008) AIDS Res Hum Retroviruses , vol.24 , pp. 363-365
    • Moyes, D.L.1    Goris, A.2    Ban, M.3    Compston, A.4    Griffiths, D.J.5    Sawcer, S.6
  • 45
    • 34147100186 scopus 로고    scopus 로고
    • Behavior of urothelial carcinoma with respect to anatomical location
    • doi:10.1016/j.juro.2007.01.030
    • Catto JW, Yates DR, Rehman I, Azzouzi AR, Patterson J, Sibony M, et al. Behavior of urothelial carcinoma with respect to anatomical location. J Urol (2007) 177:1715-20. doi:10.1016/j.juro.2007.01.030
    • (2007) J Urol , vol.177 , pp. 1715-1720
    • Catto, J.W.1    Yates, D.R.2    Rehman, I.3    Azzouzi, A.R.4    Patterson, J.5    Sibony, M.6
  • 46
    • 0031392103 scopus 로고    scopus 로고
    • Expression of sex steroid receptor genes and comodulation with retinoid signaling in normal human uroepithelial cells and bladder cancer cell lines
    • doi:10.1016/S1078-1439(98)00011-8
    • Waliszewski P, Waliszewska MK, Hemstreet GP III, Hurst RE. Expression of sex steroid receptor genes and comodulation with retinoid signaling in normal human uroepithelial cells and bladder cancer cell lines. Urol Oncol (1997) 3:141-7. doi:10.1016/S1078-1439(98)00011-8
    • (1997) Urol Oncol , vol.3 , pp. 141-147
    • Waliszewski, P.1    Waliszewska, M.K.2    Hemstreet I.I.I, G.P.3    Hurst, R.E.4
  • 47
    • 84857546743 scopus 로고    scopus 로고
    • Bladder cancer risk from occupational and environmental exposures
    • doi:10.1016/j.urolonc.2011.10.010
    • Kiriluk KJ, Prasad SM, Patel AR, Steinberg GD, Smith ND. Bladder cancer risk from occupational and environmental exposures. Urol Oncol (2012) 30:199-211. doi:10.1016/j.urolonc.2011.10.010
    • (2012) Urol Oncol , vol.30 , pp. 199-211
    • Kiriluk, K.J.1    Prasad, S.M.2    Patel, A.R.3    Steinberg, G.D.4    Smith, N.D.5
  • 48
    • 84875910038 scopus 로고    scopus 로고
    • Genome-wide methylation profiling and the PI3K-AKT pathway analysis associated with smoking in urothelial cell carcinoma
    • doi:10.4161/cc.24050
    • Brait M, Munari E, Lebron C, Noordhuis MG, Begum S, Michailidi C, et al. Genome-wide methylation profiling and the PI3K-AKT pathway analysis associated with smoking in urothelial cell carcinoma. Cell Cycle (2013) 12:1058-70. doi:10.4161/cc.24050
    • (2013) Cell Cycle , vol.12 , pp. 1058-1070
    • Brait, M.1    Munari, E.2    Lebron, C.3    Noordhuis, M.G.4    Begum, S.5    Michailidi, C.6
  • 49
    • 77955610874 scopus 로고    scopus 로고
    • Smoking increases transcription of human endogenous retroviruses in a newly established in vitro cell model and in normal urothelium
    • doi:10.1089/aid.2010.0014
    • Gabriel U, Steidler A, Trojan L, Michel MS, Seifarth W, Fabarius A. Smoking increases transcription of human endogenous retroviruses in a newly established in vitro cell model and in normal urothelium. AIDS Res Hum Retroviruses (2010) 26:883-8. doi:10.1089/aid.2010.0014
    • (2010) AIDS Res Hum Retroviruses , vol.26 , pp. 883-888
    • Gabriel, U.1    Steidler, A.2    Trojan, L.3    Michel, M.S.4    Seifarth, W.5    Fabarius, A.6
  • 50
    • 77955980727 scopus 로고    scopus 로고
    • HERVs in neuropathogenesis
    • doi:10.1007/s11481-010-9214-y
    • Christensen T. HERVs in neuropathogenesis. J Neuroimmune Pharmacol (2010) 5:326-35. doi:10.1007/s11481-010-9214-y
    • (2010) J Neuroimmune Pharmacol , vol.5 , pp. 326-335
    • Christensen, T.1
  • 51
    • 79952586736 scopus 로고    scopus 로고
    • Expression of the human endogenous retrovirus (HERV) group HML-2/HERV-K does not depend on canonical promoter elements but is regulated by transcription factors Sp1 and Sp3
    • doi:10.1128/JVI.02539-10
    • Fuchs NV, Kraft M, Tondera C, Hanschmann KM, Lower J, Lower R. Expression of the human endogenous retrovirus (HERV) group HML-2/HERV-K does not depend on canonical promoter elements but is regulated by transcription factors Sp1 and Sp3. J Virol (2011) 85:3436-48. doi:10.1128/JVI.02539-10
    • (2011) J Virol , vol.85 , pp. 3436-3448
    • Fuchs, N.V.1    Kraft, M.2    Tondera, C.3    Hanschmann, K.M.4    Lower, J.5    Lower, R.6
  • 52
    • 81355154491 scopus 로고    scopus 로고
    • Activation of the long terminal repeat of human endogenous retrovirus K by melanoma-specific transcription factor MITF-M
    • Katoh I, Mirova A, Kurata S, Murakami Y, Horikawa K, Nakakuki N, et al. Activation of the long terminal repeat of human endogenous retrovirus K by melanoma-specific transcription factor MITF-M. Neoplasia (2011) 13:1081-92.
    • (2011) Neoplasia , vol.13 , pp. 1081-1092
    • Katoh, I.1    Mirova, A.2    Kurata, S.3    Murakami, Y.4    Horikawa, K.5    Nakakuki, N.6
  • 53
    • 84864378847 scopus 로고    scopus 로고
    • Expression of human endogenous retrovirus type K (HML-2) is activated by the Tat protein of HIV-1
    • doi:10.1128/JVI.07215-11
    • Gonzalez-Hernandez MJ, Swanson MD, Contreras-Galindo R, Cookinham S, King SR, Noel RJ Jr, et al. Expression of human endogenous retrovirus type K (HML-2) is activated by the Tat protein of HIV-1. J Virol (2012) 86:7790-805. doi:10.1128/JVI.07215-11
    • (2012) J Virol , vol.86 , pp. 7790-7805
    • Gonzalez-Hernandez, M.J.1    Swanson, M.D.2    Contreras-Galindo, R.3    Cookinham, S.4    King, S.R.5    Noel Jr., R.J.6
  • 54
    • 79953854816 scopus 로고    scopus 로고
    • Recent insights into regulation of transcription by RNA polymerase III and the cellular functions of its transcripts
    • doi:10.1515/BC.2011.049
    • Nikitina TV, Tischenko LI, Schulz WA. Recent insights into regulation of transcription by RNA polymerase III and the cellular functions of its transcripts. Biol Chem (2011) 392:395-404. doi:10.1515/BC.2011.049
    • (2011) Biol Chem , vol.392 , pp. 395-404
    • Nikitina, T.V.1    Tischenko, L.I.2    Schulz, W.A.3
  • 55
    • 0023056872 scopus 로고
    • Induction of B2 RNA polymerase III transcription by heat shock: enrichment for heat shock induced sequences in rodent cells by hybridization subtraction
    • doi:10.1093/nar/14.14.5793
    • Fornace AJ Jr, Mitchell JB. Induction of B2 RNA polymerase III transcription by heat shock: enrichment for heat shock induced sequences in rodent cells by hybridization subtraction. Nucleic Acids Res (1986) 14:5793-811. doi:10.1093/nar/14.14.5793
    • (1986) Nucleic Acids Res , vol.14 , pp. 5793-5811
    • Fornace Jr., A.J.1    Mitchell, J.B.2
  • 56
    • 0035802431 scopus 로고    scopus 로고
    • Differential stress induction of individual Alu loci: implications for transcription and retrotransposition
    • doi:10.1016/S0378-1119(01)00637-0
    • Li TH, Schmid CW. Differential stress induction of individual Alu loci: implications for transcription and retrotransposition. Gene (2001) 276:135-41. doi:10.1016/S0378-1119(01)00637-0
    • (2001) Gene , vol.276 , pp. 135-141
    • Li, T.H.1    Schmid, C.W.2
  • 57
    • 39549103642 scopus 로고    scopus 로고
    • Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock
    • doi:10.1016/j.molcel.2007.12.013
    • Mariner PD, Walters RD, Espinoza CA, Drullinger LF, Wagner SD, Kugel JF, et al. Human Alu RNA is a modular transacting repressor of mRNA transcription during heat shock. Mol Cell (2008) 29:499-509. doi:10.1016/j.molcel.2007.12.013
    • (2008) Mol Cell , vol.29 , pp. 499-509
    • Mariner, P.D.1    Walters, R.D.2    Espinoza, C.A.3    Drullinger, L.F.4    Wagner, S.D.5    Kugel, J.F.6
  • 58
    • 31544480691 scopus 로고    scopus 로고
    • Hypoxic stress suppresses RNA polymerase III recruitment and tRNA gene transcription in cardiomyocytes
    • doi:10.1093/nar/gkj402
    • Ernens I, Goodfellow SJ, Innes F, Kenneth NS, Derblay LE, White RJ, et al. Hypoxic stress suppresses RNA polymerase III recruitment and tRNA gene transcription in cardiomyocytes. Nucleic Acids Res (2006) 34:286-94. doi:10.1093/nar/gkj402
    • (2006) Nucleic Acids Res , vol.34 , pp. 286-294
    • Ernens, I.1    Goodfellow, S.J.2    Innes, F.3    Kenneth, N.S.4    Derblay, L.E.5    White, R.J.6
  • 59
    • 78649717382 scopus 로고    scopus 로고
    • Aberrant methylation and associated transcriptional mobilization of Alu elements contributes to genomic instability in hypoxia
    • doi:10.1111/j.1582-4934.2009.00792.x
    • Pal A, Srivastava T, Sharma MK, Mehndiratta M, Das P, Sinha S, et al. Aberrant methylation and associated transcriptional mobilization of Alu elements contributes to genomic instability in hypoxia. J Cell Mol Med (2010) 14:2646-54. doi:10.1111/j.1582-4934.2009.00792.x
    • (2010) J Cell Mol Med , vol.14 , pp. 2646-2654
    • Pal, A.1    Srivastava, T.2    Sharma, M.K.3    Mehndiratta, M.4    Das, P.5    Sinha, S.6
  • 60
    • 25144464638 scopus 로고    scopus 로고
    • Comparison of hypoxia transcriptome in vitro with in vivo gene expression in human bladder cancer
    • doi:10.1038/sj.bjc.6602666
    • Ord JJ, Streeter EH, Roberts IS, Cranston D, Harris AL. Comparison of hypoxia transcriptome in vitro with in vivo gene expression in human bladder cancer. Br J Cancer (2005) 93:346-54. doi:10.1038/sj.bjc.6602666
    • (2005) Br J Cancer , vol.93 , pp. 346-354
    • Ord, J.J.1    Streeter, E.H.2    Roberts, I.S.3    Cranston, D.4    Harris, A.L.5
  • 61
    • 0036250811 scopus 로고    scopus 로고
    • Alu repeats and human genomic diversity
    • doi:10.1038/nrg798
    • Batzer MA, Deininger PL. Alu repeats and human genomic diversity. Nat Rev Genet (2002) 3:370-9. doi:10.1038/nrg798
    • (2002) Nat Rev Genet , vol.3 , pp. 370-379
    • Batzer, M.A.1    Deininger, P.L.2
  • 62
    • 67949092871 scopus 로고    scopus 로고
    • High-throughput sequence-based epigenomic analysis of Alu repeats in human cerebellum
    • doi:10.1093/nar/gkp393
    • Xie H, Wang M, Bonaldo Mde F, Smith C, Rajaram V, Goldman S, et al. High-throughput sequence-based epigenomic analysis of Alu repeats in human cerebellum. Nucleic Acids Res (2009) 37:4331-40. doi:10.1093/nar/gkp393
    • (2009) Nucleic Acids Res , vol.37 , pp. 4331-4340
    • Xie, H.1    Wang, M.2    Bonaldo Mde, F.3    Smith, C.4    Rajaram, V.5    Goldman, S.6
  • 63
    • 58149399844 scopus 로고    scopus 로고
    • Hypomethylation of retrotransposable elements correlates with genomic instability in non-small cell lung cancer
    • doi:10.1002/ijc.23849
    • Daskalos A, Nikolaidis G, Xinarianos G, Savvari P, Cassidy A, Zakopoulou R, et al. Hypomethylation of retrotransposable elements correlates with genomic instability in non-small cell lung cancer. Int J Cancer (2009) 124:81-7. doi:10.1002/ijc.23849
    • (2009) Int J Cancer , vol.124 , pp. 81-87
    • Daskalos, A.1    Nikolaidis, G.2    Xinarianos, G.3    Savvari, P.4    Cassidy, A.5    Zakopoulou, R.6
  • 64
    • 70350215746 scopus 로고    scopus 로고
    • Loss of epigenetic silencing in tumors preferentially affects primate-specific retroelements
    • doi:10.1016/j.gene.2009.08.006
    • Szpakowski S, Sun X, Lage JM, Dyer A, Rubinstein J, Kowalski D, et al. Loss of epigenetic silencing in tumors preferentially affects primate-specific retroelements. Gene (2009) 448:151-67. doi:10.1016/j.gene.2009.08.006
    • (2009) Gene , vol.448 , pp. 151-167
    • Szpakowski, S.1    Sun, X.2    Lage, J.M.3    Dyer, A.4    Rubinstein, J.5    Kowalski, D.6
  • 65
    • 77955787215 scopus 로고    scopus 로고
    • Aberrant promoter hypermethylation and genomic hypomethylation in tumor, adjacent normal tissues and blood from breast cancer patients
    • Cho YH, Yazici H, Wu HC, Terry MB, Gonzalez K, Qu M, et al. Aberrant promoter hypermethylation and genomic hypomethylation in tumor, adjacent normal tissues and blood from breast cancer patients. Anticancer Res (2010) 30:2489-96.
    • (2010) Anticancer Res , vol.30 , pp. 2489-2496
    • Cho, Y.H.1    Yazici, H.2    Wu, H.C.3    Terry, M.B.4    Gonzalez, K.5    Qu, M.6
  • 66
    • 77949437852 scopus 로고    scopus 로고
    • Methylation status of individual CpG sites within Alu elements in the human genome and Alu hypomethylation in gastric carcinomas
    • doi:10.1186/1471-2407-10-44
    • Xiang S, Liu Z, Zhang B, Zhou J, Zhu BD, Ji J, et al. Methylation status of individual CpG sites within Alu elements in the human genome and Alu hypomethylation in gastric carcinomas. BMC Cancer (2010) 10:44. doi:10.1186/1471-2407-10-44
    • (2010) BMC Cancer , vol.10 , pp. 44
    • Xiang, S.1    Liu, Z.2    Zhang, B.3    Zhou, J.4    Zhu, B.D.5    Ji, J.6
  • 67
    • 79961177841 scopus 로고    scopus 로고
    • Genome-wide quantitative assessment of variation in DNA methylation patterns
    • doi:10.1093/nar/gkr017
    • Xie H, Wang M, De Andrade A, Bonaldo Mde F, Galat V, Arndt K, et al. Genome-wide quantitative assessment of variation in DNA methylation patterns. Nucleic Acids Res (2011) 39:4099-108. doi:10.1093/nar/gkr017
    • (2011) Nucleic Acids Res , vol.39 , pp. 4099-4108
    • Xie, H.1    Wang, M.2    De Andrade, A.3    Bonaldo Mde, F.4    Galat, V.5    Arndt, K.6


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