Differential stress induction of individual Alu loci: Implications for transcription and retrotransposition

Gene

Volumn 276, Issue 1-2, 2001, Pages 135-141

  Li, Tzu Huey ^a   Schmid, Carl W ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Regulated expression; RNA polymerase III; Short interspersed nuclear element

Indexed keywords

COMPLEMENTARY DNA; CYCLOHEXIMIDE; RNA;

ADENOVIRUS 2; ALU SEQUENCE; ARTICLE; CELL LINE; CELL STRAIN K 562; CONTROLLED STUDY; DNA FLANKING REGION; DNA TRANSPOSITION; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENE LOCUS; GENETIC TRANSCRIPTION; HEAT SHOCK; HELA CELL; HUMAN; HUMAN CELL; LONG INTERSPERSED REPEAT; MOLECULAR CLONING; MULTIGENE FAMILY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; STRESS; TRANSCRIPTION REGULATION; VIRUS INFECTION;

ALU ELEMENTS; CELL LINE; CLONING, MOLECULAR; DNA, COMPLEMENTARY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; HEAT; HEAT-SHOCK RESPONSE; HELA CELLS; HUMANS; K562 CELLS; LONG INTERSPERSED NUCLEOTIDE ELEMENTS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, INSERTIONAL; RETROELEMENTS; RNA; SEQUENCE ANALYSIS, DNA; STRESS; TIME FACTORS; TRANSCRIPTION, GENETIC;

EID: 0035802431     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(01)00637-0     Document Type: Article

References (31)

1. LINEs and Alus - The poly A connection
2. Flanking sequences of an Alu source stimulate transcription in vitro by interacting with sequence-specific transcription factors
3. p53 inhibits RNA polymerase III-directed transcription in a promoter-dependent manner
4. Potential Alu function: Regulation of the activity of double-stranded RNA-activated kinase PKR
5. Isolation of an active human transposable element
6. Germ line-specific expression of intracisternal A-particle retrotransposons in transgenic mice
7. Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition
8. Origin and evolution of Alu repetitive elements
9. Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons
10. Sporadic amplification of ID elements in rodents
11. Genome-wide chromatin remodeling modulates the Alu heat shock response
12. Silkworm Bm1 SINE RNA increases following cellular insults
13. Stress induction of Bm1 RNA in silkworm larvae: SINEs, an unusual class of stress genes
14. Translation of LINE-1 DNA elements in vitro and in human cells
15. Physiological stresses increase mouse short interspersed element (SINE) RNA expression in vivo
16. K562 cells implicate increased chromatin accessibility in Alu transcriptional activation
17. Alu transcripts: Cytoplasmic localization and regulation by DNA methylation
18. Cell stress and translational inhibitors transiently increase the abundance of mammalian SINE transcripts
19. Multiple dispersed loci produce small cytoplasmic Alu RNA
20. Reverse transcriptase encoded by a human transposable element
21. High frequency retrotransposition in cultured mammalian cells
22. Genetic applications of an inverse polymerase chain reaction
23. SINEs and LINEs share common 3′ sequences: A review
24. Activation of expression of multiple subfamilies of human Alu elements by adenovirus type 5 and herpes simplex virus type 1
25. Adenovirus type 2 preferentially stimulates polymerase III transcription of Alu elements by relieving repression: A potential role for chromatin
26. Does SINE evolution preclude Alu function?
27. cDNAs derived from primary and small cytoplasmic Alu (scAlu) transcripts
28. Alu RNA transcripts in human embryonal carcinoma cells. Model of post-transcriptional selection of master sequences
29. Nonviral retroposons: Genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information