-
1
-
-
77954287478
-
-
Buchan, D. W., Ward, S. M., Lobley, A. E., Nugent, T. C., Bryson, K. & Jones, D. T. (2010). Nucleic Acids Res. 38, W563-W568.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Buchan, D.W.1
Ward, S.M.2
Lobley, A.E.3
Nugent, T.C.4
Bryson, K.5
Jones, D.T.6
-
2
-
-
75749103345
-
-
Chang, C., Tesar, C., Gu, M., Babnigg, G., Joachimiak, A., Pokkuluri, P. R., Szurmant, H. & Schiffer, M. (2010). J. Bacteriol. 192, 1156-1159.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 1156-1159
-
-
Chang, C.1
Tesar, C.2
Gu, M.3
Babnigg, G.4
Joachimiak, A.5
Pokkuluri, P.R.6
Szurmant, H.7
Schiffer, M.8
-
3
-
-
74549178560
-
-
Chen, V. B., Arendall, W. B., Headd, J. J., Keedy, D. A., Immormino, R. M., Kapral, G. J., Murray, L. W., Richardson, J. S. & Richardson, D. C. (2010). Acta Cryst. D66, 12-21.
-
(2010)
Acta Cryst. D
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Arendall, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
Kapral, G.J.6
Murray, L.W.7
Richardson, J.S.8
Richardson, D.C.9
-
5
-
-
84861389671
-
-
Christie, J. M., Gawthorne, J., Young, G., Fraser, N. J. & Roe, A. J. (2012). Mol. Plant, 5, 533-544.
-
(2012)
Mol. Plant
, vol.5
, pp. 533-544
-
-
Christie, J.M.1
Gawthorne, J.2
Young, G.3
Fraser, N.J.4
Roe, A.J.5
-
6
-
-
84862644823
-
-
Christie, J. M., Hitomi, K., Arvai, A. S., Hartfield, K. A., Mettlen, M., Pratt, A. J., Tainer, J. A. & Getzoff, E. D. (2012). J. Biol. Chem. 287, 22295-22304.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 22295-22304
-
-
Christie, J.M.1
Hitomi, K.2
Arvai, A.S.3
Hartfield, K.A.4
Mettlen, M.5
Pratt, A.J.6
Tainer, J.A.7
Getzoff, E.D.8
-
7
-
-
0032573502
-
-
Christie, J. M., Reymond, P., Powell, G. K., Bernasconi, P., Raibekas, A. A., Liscum, E. & Briggs, W. R. (1998). Science, 282, 1698-1701.
-
(1998)
Science
, vol.282
, pp. 1698-1701
-
-
Christie, J.M.1
Reymond, P.2
Powell, G.K.3
Bernasconi, P.4
Raibekas, A.A.5
Liscum, E.6
Briggs, W.R.7
-
8
-
-
0036776294
-
-
Christie, J. M., Swartz, T. E., Bogomolni, R. A. & Briggs, W. R. (2002). Plant J. 32, 205-219.
-
(2002)
Plant J.
, vol.32
, pp. 205-219
-
-
Christie, J.M.1
Swartz, T.E.2
Bogomolni, R.A.3
Briggs, W.R.4
-
9
-
-
84857997918
-
-
Circolone, F., Granzin, J., Jentzsch, K., Drepper, T., Jaeger, K. E., Willbold, D., Krauss, U. & Batra-Safferling, R. (2012). J. Mol. Biol. 417, 362-374.
-
(2012)
J. Mol. Biol.
, vol.417
, pp. 362-374
-
-
Circolone, F.1
Granzin, J.2
Jentzsch, K.3
Drepper, T.4
Jaeger, K.E.5
Willbold, D.6
Krauss, U.7
Batra-Safferling, R.8
-
10
-
-
84872550755
-
-
Conrad, K. S., Bilwes, A. M. & Crane, B. R. (2013). Biochemistry, 52, 378-391.
-
(2013)
Biochemistry
, vol.52
, pp. 378-391
-
-
Conrad, K.S.1
Bilwes, A.M.2
Crane, B.R.3
-
14
-
-
0037435618
-
-
Crosson, S., Rajagopal, S. & Moffat, K. (2003). Biochemistry, 42, 2-10.
-
(2003)
Biochemistry
, vol.42
, pp. 2-10
-
-
Crosson, S.1
Rajagopal, S.2
Moffat, K.3
-
15
-
-
34547592557
-
-
Davis, I. W., Leaver-Fay, A., Chen, V. B., Block, J. N., Kapral, G. J., Wang, X., Murray, L.W., Arendall, W. B., Snoeyink, J., Richardson, J. S. & Richardson, D. C. (2007). Nucleic Acids Res. 35, W375-W383.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
Wang, X.6
Murray, L.W.7
Arendall, W.B.8
Snoeyink, J.9
Richardson, J.S.10
Richardson, D.C.11
-
16
-
-
0012293235
-
-
v.1.5.0.4
-
DeLano, W. L. (2010). PyMOL, v.1.5.0.4. http://www.pymol.org.
-
(2010)
PyMOL
-
-
Delano, W.L.1
-
17
-
-
84879836986
-
-
Diensthuber, R. P., Bommer, M., Gleichmann, T. & Mö glich, A. (2013). Structure, 21, 1127-1136.
-
(2013)
Structure
, vol.21
, pp. 1127-1136
-
-
Diensthuber, R.P.1
-
18
-
-
79954902381
-
-
Drepper, T., Krauss, U., Meyer zu Berstenhorst, S., Pietruszka, J. & Jaeger, K. E. (2011). Appl. Microbiol. Biotechnol. 90, 23-40.
-
(2011)
Appl. Microbiol. Biotechnol.
, vol.90
, pp. 23-40
-
-
Drepper, T.1
Krauss, U.2
Meyer Zu Berstenhorst, S.3
Pietruszka, J.4
Jaeger, K.E.5
-
20
-
-
77949535720
-
-
Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. (2010). Acta Cryst. D66, 486-501.
-
(2010)
Acta Cryst. D
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
21
-
-
53549125239
-
-
Etzkorn, M., Kneuper, H., Dü nnwald, P., Vijayan, V., Krämer, J., Griesinger, C., Becker, S., Unden, G. & Baldus, M. (2008). Nature Struct. Mol. Biol. 15, 1031-1039.
-
(2008)
Nature Struct. Mol. Biol.
, vol.15
, pp. 1031-1039
-
-
Etzkorn, M.1
-
23
-
-
0032961270
-
-
Gouet, P., Courcelle, E., Stuart, D. I. & Métoz, F. (1999). Bioinformatics, 15, 305-308.
-
(1999)
Bioinformatics
, vol.15
, pp. 305-308
-
-
Gouet, P.1
Courcelle, E.2
Stuart, D.I.3
Métoz, F.4
-
25
-
-
0141707094
-
-
Harper, S. M., Neil, L. C. & Gardner, K. H. (2003). Science, 301, 1541-1544.
-
(2003)
Science
, vol.301
, pp. 1541-1544
-
-
Harper, S.M.1
Neil, L.C.2
Gardner, K.H.3
-
27
-
-
0037048688
-
-
Iwata, T., Tokutomi, S. & Kandori, H. (2002). J. Am. Chem. Soc. 124, 11840-11841.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 11840-11841
-
-
Iwata, T.1
Tokutomi, S.2
Kandori, H.3
-
29
-
-
0035896393
-
-
Kagawa, T., Sakai, T., Suetsugu, N., Oikawa, K., Ishiguro, S., Kato, T., Tabata, S., Okada, K. & Wada, M. (2001). Science, 291, 2138-2141.
-
(2001)
Science
, vol.291
, pp. 2138-2141
-
-
Kagawa, T.1
Sakai, T.2
Suetsugu, N.3
Oikawa, K.4
Ishiguro, S.5
Kato, T.6
Tabata, S.7
Okada, K.8
Wada, M.9
-
30
-
-
0035983657
-
-
Kasahara, M., Swartz, T. E., Olney, M. A., Onodera, A., Mochizuki, N., Fukuzawa, H., Asamizu, E., Tabata, S., Kanegae, H., Takano, M., Christie, J. M., Nagatani, A. & Briggs, W. R. (2002). Plant Physiol. 129, 762-773.
-
(2002)
Plant Physiol.
, vol.129
, pp. 762-773
-
-
Kasahara, M.1
Swartz, T.E.2
Olney, M.A.3
Onodera, A.4
Mochizuki, N.5
Fukuzawa, H.6
Asamizu, E.7
Tabata, S.8
Kanegae, H.9
Takano, M.10
Christie, J.M.11
Nagatani, A.12
Briggs, W.R.13
-
31
-
-
33947412138
-
-
Key, J., Hefti, M., Purcell, E. B. & Moffat, K. (2007). Biochemistry, 46, 3614-3623.
-
(2007)
Biochemistry
, vol.46
, pp. 3614-3623
-
-
Key, J.1
Hefti, M.2
Purcell, E.B.3
Moffat, K.4
-
33
-
-
0035818967
-
-
(London)
-
Kinoshita, T., Doi, M., Suetsugu, N., Kagawa, T., Wada, M. & Shimazaki, K. (2001). Nature (London), 414, 656-660.
-
(2001)
Nature
, vol.414
, pp. 656-660
-
-
Kinoshita, T.1
Doi, M.2
Suetsugu, N.3
Kagawa, T.4
Wada, M.5
Shimazaki, K.6
-
34
-
-
0000243829
-
-
Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
-
(1993)
J. Appl. Cryst.
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
36
-
-
41449111029
-
-
Lee, J., Tomchick, D. R., Brautigam, C. A., Machius, M., Kort, R., Hellingwerf, K. J. & Gardner, K. H. (2008). Biochemistry, 47, 4051-4064.
-
(2008)
Biochemistry
, vol.47
, pp. 4051-4064
-
-
Lee, J.1
Tomchick, D.R.2
Brautigam, C.A.3
MacHius, M.4
Kort, R.5
Hellingwerf, K.J.6
Gardner, K.H.7
-
37
-
-
84867295607
-
-
Little, R., Slavny, P. & Dixon, R. (2012). PLoS One, 7, e46651.
-
(2012)
PLoS One
, vol.7
-
-
Little, R.1
Slavny, P.2
Dixon, R.3
-
39
-
-
34447508216
-
-
McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C. & Read, R. J. (2007). J. Appl. Cryst. 40, 658-674.
-
(2007)
J. Appl. Cryst.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
40
-
-
33745933955
-
-
Minor, W., Cymborowski, M., Otwinowski, Z. & Chruszcz, M. (2006). Acta Cryst. D62, 859-866.
-
(2006)
Acta Cryst. D
, vol.62
, pp. 859-866
-
-
Minor, W.1
Cymborowski, M.2
Otwinowski, Z.3
Chruszcz, M.4
-
41
-
-
0034636982
-
-
Miyatake, H., Mukai, M., Park, S.-Y., Adachi, S., Tamura, K., Nakamura, H., Nakamura, K., Tsuchiya, T., Iizuka, T. & Shiro, Y. (2000). J. Mol. Biol. 301, 415-431.
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 415-431
-
-
Miyatake, H.1
Mukai, M.2
Park, S.-Y.3
Adachi, S.4
Tamura, K.5
Nakamura, H.6
Nakamura, K.7
Tsuchiya, T.8
Iizuka, T.9
Shiro, Y.10
-
42
-
-
58549105950
-
-
Mö glich, A., Ayers, R. A. & Moffat, K. (2009a). J. Mol. Biol. 385, 1433-1444.
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 1433-1444
-
-
Möglich, A.1
-
43
-
-
70349777587
-
-
Mö glich, A., Ayers, R. A. & Moffat, K. (2009b). Structure, 17, 1282-1294.
-
(2009)
Structure
, vol.17
, pp. 1282-1294
-
-
Möglich, A.1
-
45
-
-
85084628947
-
-
Morais Cabral, J. H., Lee, A., Cohen, S. L., Chait, B. T., Li, M. & Mackinnon, R. (1998). Cell, 95, 649-655.
-
(1998)
Cell
, vol.95
, pp. 649-655
-
-
Morais, C.J.H.1
Lee, A.2
Cohen, S.L.3
Chait, B.T.4
Li, M.5
MacKinnon, R.6
-
46
-
-
0347383760
-
-
Morris, R. J., Perrakis, A. & Lamzin, V. S. (2003). Methods Enzymol. 374, 229-244.
-
(2003)
Methods Enzymol.
, vol.374
, pp. 229-244
-
-
Morris, R.J.1
Perrakis, A.2
Lamzin, V.S.3
-
47
-
-
79953763877
-
-
Murshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). Acta Cryst. D67, 355-367.
-
(2011)
Acta Cryst. D
, vol.67
, pp. 355-367
-
-
Murshudov, G.N.1
Skubák, P.2
Lebedev, A.A.3
Pannu, N.S.4
Steiner, R.A.5
Nicholls, R.A.6
Winn, M.D.7
Long, F.8
Vagin, A.A.9
-
48
-
-
9744263917
-
-
Nakasako, M., Iwata, T., Matsuoka, D. & Tokutomi, S. (2004). Biochemistry, 43, 14881-14890.
-
(2004)
Biochemistry
, vol.43
, pp. 14881-14890
-
-
Nakasako, M.1
Iwata, T.2
Matsuoka, D.3
Tokutomi, S.4
-
49
-
-
47849125383
-
-
Nakasako, M., Zikihara, K., Matsuoka, D., Katsura, H. & Tokutomi, S. (2008). J. Mol. Biol. 381, 718-733.
-
(2008)
J. Mol. Biol.
, vol.381
, pp. 718-733
-
-
Nakasako, M.1
Zikihara, K.2
Matsuoka, D.3
Katsura, H.4
Tokutomi, S.5
-
50
-
-
33745686031
-
-
Nakasone, Y., Eitoku, T., Matsuoka, D., Tokutomi, S. & Terazima, M. (2006). Biophys. J. 91, 645-653.
-
(2006)
Biophys. J.
, vol.91
, pp. 645-653
-
-
Nakasone, Y.1
Eitoku, T.2
Matsuoka, D.3
Tokutomi, S.4
Terazima, M.5
-
51
-
-
53149153847
-
-
Nakasone, Y., Eitoku, T., Zikihara, K., Matsuoka, D., Tokutomi, S. & Terazima, M. (2008). J. Mol. Biol. 383, 904-913.
-
(2008)
J. Mol. Biol.
, vol.383
, pp. 904-913
-
-
Nakasone, Y.1
Eitoku, T.2
Zikihara, K.3
Matsuoka, D.4
Tokutomi, S.5
Terazima, M.6
-
52
-
-
77949363037
-
-
Nan, B., Liu, X., Zhou, Y., Liu, J., Zhang, L., Wen, J., Zhang, X., Su, X.-D. & Wang, Y.-P. (2010). Mol. Microbiol. 75, 1484-1494.
-
(2010)
Mol. Microbiol.
, vol.75
, pp. 1484-1494
-
-
Nan, B.1
Liu, X.2
Zhou, Y.3
Liu, J.4
Zhang, L.5
Wen, J.6
Zhang, X.7
Su, X.-D.8
Wang, Y.-P.9
-
53
-
-
84870342787
-
-
Okajima, K., Kashojiya, S. & Tokutomi, S. (2012). J. Biol. Chem. 287, 40972-40981.
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 40972-40981
-
-
Okajima, K.1
Kashojiya, S.2
Tokutomi, S.3
-
54
-
-
1542327658
-
-
Park, H., Suquet, C., Satterlee, J. D. & Kang, C. (2004). Biochemistry, 43, 2738-2746.
-
(2004)
Biochemistry
, vol.43
, pp. 2738-2746
-
-
Park, H.1
Suquet, C.2
Satterlee, J.D.3
Kang, C.4
-
55
-
-
51349107479
-
-
Parry, D. A. D., Fraser, R. D. B. & Squire, J. M. (2008). J. Struct. Biol. 163, 258-269.
-
(2008)
J. Struct. Biol.
, vol.163
, pp. 258-269
-
-
Parry, D.A.D.1
Fraser, R.D.B.2
Squire, J.M.3
-
56
-
-
0035810965
-
-
Sakai, T., Kagawa, T., Kasahara, M., Swartz, T. E., Christie, J. M., Briggs, W. R., Wada, M. & Okada, K. (2001). Proc. Natl Acad. Sci. USA, 98, 6969-6974.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 6969-6974
-
-
Sakai, T.1
Kagawa, T.2
Kasahara, M.3
Swartz, T.E.4
Christie, J.M.5
Briggs, W.R.6
Wada, M.7
Okada, K.8
-
58
-
-
0034622586
-
-
Salomon, M., Christie, J. M., Knieb, E., Lempert, U. & Briggs, W. R. (2000). Biochemistry, 39, 9401-9410.
-
(2000)
Biochemistry
, vol.39
, pp. 9401-9410
-
-
Salomon, M.1
Christie, J.M.2
Knieb, E.3
Lempert, U.4
Briggs, W.R.5
-
59
-
-
4143081643
-
-
Salomon, M., Lempert, U. & Rü diger, W. (2004). FEBS Lett. 572, 8-10.
-
(2004)
FEBS Lett.
, vol.572
, pp. 8-10
-
-
Salomon, M.1
Lempert, U.2
Rü Diger, W.3
-
60
-
-
72949089271
-
-
Slavny, P., Little, R., Salinas, P., Clarke, T. A. & Dixon, R. (2010). Mol. Microbiol. 75, 61-75.
-
(2010)
Mol. Microbiol.
, vol.75
, pp. 61-75
-
-
Slavny, P.1
Little, R.2
Salinas, P.3
Clarke, T.A.4
Dixon, R.5
-
61
-
-
84862777445
-
-
Strickland, D., Lin, Y., Wagner, E., Hope, C. M., Zayner, J., Antoniou, C., Sosnick, T. R., Weiss, E. L. & Glotzer, M. (2012). Nature Methods, 9, 379-384.
-
(2012)
Nature Methods
, vol.9
, pp. 379-384
-
-
Strickland, D.1
Lin, Y.2
Wagner, E.3
Hope, C.M.4
Zayner, J.5
Antoniou, C.6
Sosnick, T.R.7
Weiss, E.L.8
Glotzer, M.9
-
62
-
-
49449118042
-
-
Strickland, D., Moffat, K. & Sosnick, T. R. (2008). Proc. Natl Acad. Sci. USA, 105, 10709-10714.
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 10709-10714
-
-
Strickland, D.1
Moffat, K.2
Sosnick, T.R.3
-
63
-
-
0035965307
-
-
Swartz, T. E., Corchnoy, S. B., Christie, J. M., Lewis, J. W., Szundi, I., Briggs, W. R. & Bogomolni, R. A. (2001). J. Biol. Chem. 276, 36493-36500.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 36493-36500
-
-
Swartz, T.E.1
Corchnoy, S.B.2
Christie, J.M.3
Lewis, J.W.4
Szundi, I.5
Briggs, W.R.6
Bogomolni, R.A.7
-
64
-
-
84890016804
-
-
doi:10.1021/jp406109j
-
Takeda, K., Nakasone, Y., Zikihara, K., Tokutomi, S. & Terazima, M. (2013). J. Phys. Chem. B, doi:10.1021/jp406109j.
-
(2013)
J. Phys. Chem. B
-
-
Takeda, K.1
Nakasone, Y.2
Zikihara, K.3
Tokutomi, S.4
Terazima, M.5
-
65
-
-
23944471774
-
-
Takemiya, A., Inoue, S., Doi, M., Kinoshita, T. & Shimazaki, K. (2005). Plant Cell, 17, 1120-1127.
-
(2005)
Plant Cell
, vol.17
, pp. 1120-1127
-
-
Takemiya, A.1
Inoue, S.2
Doi, M.3
Kinoshita, T.4
Shimazaki, K.5
-
67
-
-
0027968068
-
-
Thompson, J. D., Higgins, D. G. and Gibson, T. J. (1994). Nucleic Acids Res. 22, 4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
69
-
-
84874684844
-
-
Wang, C., Sang, J., Wang, J., Su, M., Downey, J. S., Wu, Q., Wang, S., Cai, Y., Xu, X., Wu, J., Senadheera, D. B., Cvitkovitch, D. G., Chen, L., Goodman, S. D. & Han, A. (2013). PLoS Biol. 11, e1001493.
-
(2013)
PLoS Biol.
, vol.11
-
-
Wang, C.1
Sang, J.2
Wang, J.3
Su, M.4
Downey, J.S.5
Wu, Q.6
Wang, S.7
Cai, Y.8
Xu, X.9
Wu, J.10
Senadheera, D.B.11
Cvitkovitch, D.G.12
Chen, L.13
Goodman, S.D.14
Han, A.15
-
70
-
-
79953737180
-
-
Winn, M. D. et al. (2011). Acta Cryst. D67, 235-242.
-
(2011)
Acta Cryst. D
, vol.67
, pp. 235-242
-
-
Winn, M.D.1
-
71
-
-
69949104482
-
-
(London)
-
Wu, Y. I., Frey, D., Lungu, O. I., Jaehrig, A., Schlichting, I., Kuhlman, B. & Hahn, K. M. (2009). Nature (London), 461, 104-108.
-
(2009)
Nature
, vol.461
, pp. 104-108
-
-
Wu, Y.I.1
Frey, D.2
Lungu, O.I.3
Jaehrig, A.4
Schlichting, I.5
Kuhlman, B.6
Hahn, K.M.7
-
72
-
-
55749108880
-
-
Yang, X., Kuk, J. & Moffat, K. (2008). Proc. Natl Acad. Sci. USA, 105, 14715-14720.
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 14715-14720
-
-
Yang, X.1
Kuk, J.2
Moffat, K.3
-
73
-
-
84860285055
-
-
Zayner, J. P., Antoniou, C. & Sosnick, T. R. (2012). J. Mol. Biol. 419, 61-74.
-
(2012)
J. Mol. Biol.
, vol.419
, pp. 61-74
-
-
Zayner, J.P.1
Antoniou, C.2
Sosnick, T.R.3
-
74
-
-
52249108909
-
-
Zhou, Y.-F., Nan, B., Nan, J., Ma, Q., Panjikar, S., Liang, Y.-H., Wang, Y. & Su, X.-D. (2008). J. Mol. Biol. 383, 49-61.
-
(2008)
J. Mol. Biol.
, vol.383
, pp. 49-61
-
-
Zhou, Y.-F.1
Nan, B.2
Nan, J.3
Ma, Q.4
Panjikar, S.5
Liang, Y.-H.6
Wang, Y.7
Su, X.-D.8
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