-
1
-
-
0032990441
-
PAS domains: internal sensors of oxygen, redox potential, and light
-
Taylor BL, Zhulin IB, (1999) PAS domains: internal sensors of oxygen, redox potential, and light. Microbiol Mol Biol Rev 63: 479-506.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 479-506
-
-
Taylor, B.L.1
Zhulin, I.B.2
-
2
-
-
70349777587
-
Structure and Signaling Mechanism of Per-ARNT-Sim Domains
-
Möglich A, Ayers RA, Moffat K, (2009) Structure and Signaling Mechanism of Per-ARNT-Sim Domains. Structure 17: 1282-1294.
-
(2009)
Structure
, vol.17
, pp. 1282-1294
-
-
Möglich, A.1
Ayers, R.A.2
Moffat, K.3
-
3
-
-
80053291460
-
Ligand-Binding PAS Domains in a Genomic, Cellular, and Structural Context
-
Henry JT, Crosson S, (2011) Ligand-Binding PAS Domains in a Genomic, Cellular, and Structural Context. Annu Rev Microbiol 65: 261-286.
-
(2011)
Annu Rev Microbiol
, vol.65
, pp. 261-286
-
-
Henry, J.T.1
Crosson, S.2
-
4
-
-
1642274684
-
The PAS fold. A redefinition of the PAS domain based upon structural prediction
-
Hefti MH, Francoijs K-J, de Vries SC, Dixon R, Vervoort J, (2004) The PAS fold. A redefinition of the PAS domain based upon structural prediction. Eur J Biochem 271: 1198-1208.
-
(2004)
Eur J Biochem
, vol.271
, pp. 1198-1208
-
-
Hefti, M.H.1
Francoijs, K.-J.2
de Vries, S.C.3
Dixon, R.4
Vervoort, J.5
-
5
-
-
0032568630
-
Photoactive yellow protein: a structural prototype for the three-dimensional fold of the PAS domain superfamily
-
Pellequer JL, Wager-Smith KA, Kay SA, Getzoff ED, (1998) Photoactive yellow protein: a structural prototype for the three-dimensional fold of the PAS domain superfamily. Proc Natl Acad Sci U S A 95: 5884-5890.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 5884-5890
-
-
Pellequer, J.L.1
Wager-Smith, K.A.2
Kay, S.A.3
Getzoff, E.D.4
-
6
-
-
58549105950
-
Design and Signaling Mechanism of Light-Regulated Histidine Kinases
-
Möglich A, Ayers RA, Moffat K, (2009) Design and Signaling Mechanism of Light-Regulated Histidine Kinases. J Mol Biol 385: 1433-1444.
-
(2009)
J Mol Biol
, vol.385
, pp. 1433-1444
-
-
Möglich, A.1
Ayers, R.A.2
Moffat, K.3
-
7
-
-
77954383214
-
Addition at the Molecular Level: Signal Integration in Designed Per-ARNT-Sim Receptor Proteins
-
Möglich A, Ayers RA, Moffat K, (2010) Addition at the Molecular Level: Signal Integration in Designed Per-ARNT-Sim Receptor Proteins. J Mol Biol 400: 477-486.
-
(2010)
J Mol Biol
, vol.400
, pp. 477-486
-
-
Möglich, A.1
Ayers, R.A.2
Moffat, K.3
-
8
-
-
1642500165
-
The NifL-NifA system: a multidomain transcriptional regulatory complex that integrates environmental signals
-
Martinez-Argudo I, Little R, Shearer N, Johnson P, Dixon R, (2004) The NifL-NifA system: a multidomain transcriptional regulatory complex that integrates environmental signals. J Bacteriol 186: 601-610.
-
(2004)
J Bacteriol
, vol.186
, pp. 601-610
-
-
Martinez-Argudo, I.1
Little, R.2
Shearer, N.3
Johnson, P.4
Dixon, R.5
-
9
-
-
4344704870
-
Genetic regulation of biological nitrogen fixation
-
Dixon R, Kahn D, (2004) Genetic regulation of biological nitrogen fixation. Nature Rev Microbiol 2: 621-631.
-
(2004)
Nature Rev Microbiol
, vol.2
, pp. 621-631
-
-
Dixon, R.1
Kahn, D.2
-
10
-
-
80053229279
-
Substitutions in the redox-sensing PAS domain of the NifL regulatory protein define an inter-subunit pathway for redox signal transmission
-
Little R, Salinas P, Slavny P, Clarke TA, Dixon R, (2011) Substitutions in the redox-sensing PAS domain of the NifL regulatory protein define an inter-subunit pathway for redox signal transmission. Mol Microbiol 82: 222-235.
-
(2011)
Mol Microbiol
, vol.82
, pp. 222-235
-
-
Little, R.1
Salinas, P.2
Slavny, P.3
Clarke, T.A.4
Dixon, R.5
-
11
-
-
0029875231
-
Azotobacter vinelandii NIFL is a flavoprotein that modulates transcriptional activation of nitrogen-fixation genes via a redox-sensitive switch
-
Hill S, Austin S, Eydmann T, Jones T, Dixon R, (1996) Azotobacter vinelandii NIFL is a flavoprotein that modulates transcriptional activation of nitrogen-fixation genes via a redox-sensitive switch. Proc Natl Acad Sci USA 93: 2143-2148.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 2143-2148
-
-
Hill, S.1
Austin, S.2
Eydmann, T.3
Jones, T.4
Dixon, R.5
-
12
-
-
72949089271
-
Quaternary structure changes in a second Per-Arnt-Sim domain mediate intramolecular redox signal relay in the NifL regulatory protein
-
Slavny P, Little R, Salinas P, Clarke TA, Dixon R, (2010) Quaternary structure changes in a second Per-Arnt-Sim domain mediate intramolecular redox signal relay in the NifL regulatory protein. Mol Microbiol 75: 61-75.
-
(2010)
Mol Microbiol
, vol.75
, pp. 61-75
-
-
Slavny, P.1
Little, R.2
Salinas, P.3
Clarke, T.A.4
Dixon, R.5
-
13
-
-
33947412138
-
Structure of the redox sensor domain of Azotobacter vinelandii NifL at atomic resolution: signaling, dimerization, and mechanism
-
Key J, Hefti M, Purcell EB, Moffat K, (2007) Structure of the redox sensor domain of Azotobacter vinelandii NifL at atomic resolution: signaling, dimerization, and mechanism. Biochemistry 46: 3614-3623.
-
(2007)
Biochemistry
, vol.46
, pp. 3614-3623
-
-
Key, J.1
Hefti, M.2
Purcell, E.B.3
Moffat, K.4
-
14
-
-
0031921952
-
The redox-and fixed nitrogen-responsive regulatory protein NIFL from Azotobacter vinelandii comprises discrete flavin and nucleotide-binding domains
-
Söderbäck E, Reyes-Ramirez F, Eydmann T, Austin S, Hill S, et al. (1998) The redox-and fixed nitrogen-responsive regulatory protein NIFL from Azotobacter vinelandii comprises discrete flavin and nucleotide-binding domains. Mol Microbiol 28: 179-192.
-
(1998)
Mol Microbiol
, vol.28
, pp. 179-192
-
-
Söderbäck, E.1
Reyes-Ramirez, F.2
Eydmann, T.3
Austin, S.4
Hill, S.5
-
15
-
-
13444249595
-
Mutational Analysis of the Nucleotide-binding Domain of the Anti-activator NifL
-
Perry S, Shearer N, Little R, Dixon R, (2005) Mutational Analysis of the Nucleotide-binding Domain of the Anti-activator NifL. J Mol Biol 346: 935-949.
-
(2005)
J Mol Biol
, vol.346
, pp. 935-949
-
-
Perry, S.1
Shearer, N.2
Little, R.3
Dixon, R.4
-
16
-
-
34250376065
-
Role of the H domain of the histidine kinase-like protein NifL in signal transmission
-
Little R, Martinez-Argudo I, Perry S, Dixon R, (2007) Role of the H domain of the histidine kinase-like protein NifL in signal transmission. J Biol Chem 282: 13429-13437.
-
(2007)
J Biol Chem
, vol.282
, pp. 13429-13437
-
-
Little, R.1
Martinez-Argudo, I.2
Perry, S.3
Dixon, R.4
-
17
-
-
0043209062
-
The amino-terminal GAF domain of Azotobacter vinelandii NifA binds 2-oxoglutarate to resist inhibition by NifL under nitrogen-limiting conditions
-
Little R, Dixon R, (2003) The amino-terminal GAF domain of Azotobacter vinelandii NifA binds 2-oxoglutarate to resist inhibition by NifL under nitrogen-limiting conditions. J Biol Chem 278: 28711-28718.
-
(2003)
J Biol Chem
, vol.278
, pp. 28711-28718
-
-
Little, R.1
Dixon, R.2
-
18
-
-
77954287478
-
Protein annotation and modelling servers at University College London
-
Buchan DWA, Ward SM, Lobley AE, Nugent TCO, Bryson K, et al. (2010) Protein annotation and modelling servers at University College London. Nucleic Acids Res 38: W563-W568.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Buchan, D.W.A.1
Ward, S.M.2
Lobley, A.E.3
Nugent, T.C.O.4
Bryson, K.5
-
19
-
-
0035025555
-
Role of Escherichia coli nitrogen regulatory genes in the nitrogen response of the Azotobacter vinelandii NifL-NifA complex
-
Reyes-Ramirez F, Little R, Dixon R, (2001) Role of Escherichia coli nitrogen regulatory genes in the nitrogen response of the Azotobacter vinelandii NifL-NifA complex. J Bacteriol 183: 3076-3082.
-
(2001)
J Bacteriol
, vol.183
, pp. 3076-3082
-
-
Reyes-Ramirez, F.1
Little, R.2
Dixon, R.3
-
20
-
-
0037013219
-
Direct interaction of the NifL regulatory protein with the GlnK signal transducer enables the Azotobacter vinelandii NifL-NifA regulatory system to respond to conditions replete for nitrogen
-
Little R, Colombo V, Leech A, Dixon R, (2002) Direct interaction of the NifL regulatory protein with the GlnK signal transducer enables the Azotobacter vinelandii NifL-NifA regulatory system to respond to conditions replete for nitrogen. J Biol Chem 277: 15472-15481.
-
(2002)
J Biol Chem
, vol.277
, pp. 15472-15481
-
-
Little, R.1
Colombo, V.2
Leech, A.3
Dixon, R.4
-
21
-
-
0034669188
-
Signal transduction to the Azotobacter vinelandii NIFL-NIFA regulatory system is influenced directly by interaction with 2-oxoglutarate and the PII regulatory protein
-
Little R, Reyes-Ramirez F, Zhang Y, van Heeswijk WC, Dixon R, (2000) Signal transduction to the Azotobacter vinelandii NIFL-NIFA regulatory system is influenced directly by interaction with 2-oxoglutarate and the PII regulatory protein. EMBO J 19: 6041-6050.
-
(2000)
EMBO J
, vol.19
, pp. 6041-6050
-
-
Little, R.1
Reyes-Ramirez, F.2
Zhang, Y.3
van Heeswijk, W.C.4
Dixon, R.5
-
22
-
-
9244237555
-
A crucial arginine residue is required for a conformational switch in NifL to regulate nitrogen fixation in Azotobacter vinelandii
-
Martinez-Argudo I, Little R, Dixon R, (2004) A crucial arginine residue is required for a conformational switch in NifL to regulate nitrogen fixation in Azotobacter vinelandii. Proc Natl Acad Sci USA 101: 16316-16321.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 16316-16321
-
-
Martinez-Argudo, I.1
Little, R.2
Dixon, R.3
-
23
-
-
41449111029
-
Changes at the KinA PAS-A dimerization interface influence histidine kinase function
-
Lee J, Tomchick DR, Brautigam CA, Machius M, Kort R, et al. (2008) Changes at the KinA PAS-A dimerization interface influence histidine kinase function. Biochemistry 47: 4051-4064.
-
(2008)
Biochemistry
, vol.47
, pp. 4051-4064
-
-
Lee, J.1
Tomchick, D.R.2
Brautigam, C.A.3
Machius, M.4
Kort, R.5
-
24
-
-
53549125239
-
Plasticity of the PAS domain and a potential role for signal transduction in the histidine kinase DcuS
-
Etzkorn M, Kneuper H, Dunnwald P, Vijayan V, Kramer J, et al. (2008) Plasticity of the PAS domain and a potential role for signal transduction in the histidine kinase DcuS. Nat Struct Mol Biol 15: 1031-1039.
-
(2008)
Nat Struct Mol Biol
, vol.15
, pp. 1031-1039
-
-
Etzkorn, M.1
Kneuper, H.2
Dunnwald, P.3
Vijayan, V.4
Kramer, J.5
-
25
-
-
77949363037
-
From signal perception to signal transduction: ligand-induced dimeric switch of DctB sensory domain in solution
-
Nan B, Liu X, Zhou Y, Liu J, Zhang L, et al. (2010) From signal perception to signal transduction: ligand-induced dimeric switch of DctB sensory domain in solution. Mol Microbiol 75: 1484-1494.
-
(2010)
Mol Microbiol
, vol.75
, pp. 1484-1494
-
-
Nan, B.1
Liu, X.2
Zhou, Y.3
Liu, J.4
Zhang, L.5
-
26
-
-
0035881536
-
A Novel Purification Method for Histidine-Tagged Proteins Containing a Thrombin Cleavage Site
-
Hefti MH, Van Vugt-Van der Toorn CJG, Dixon R, Vervoort J, (2001) A Novel Purification Method for Histidine-Tagged Proteins Containing a Thrombin Cleavage Site. Anal Biochem 295: 180-185.
-
(2001)
Anal Biochem
, vol.295
, pp. 180-185
-
-
Hefti, M.H.1
van Vugt-Van der Toorn, C.J.G.2
Dixon, R.3
Vervoort, J.4
-
27
-
-
46849107098
-
Light activation of the LOV protein vivid generates a rapidly exchanging dimer
-
Zoltowski BD, Crane BR, (2008) Light activation of the LOV protein vivid generates a rapidly exchanging dimer. Biochemistry 47: 7012-7019.
-
(2008)
Biochemistry
, vol.47
, pp. 7012-7019
-
-
Zoltowski, B.D.1
Crane, B.R.2
-
28
-
-
38149078912
-
PAS-mediated Dimerization of Soluble Guanylyl Cyclase Revealed by Signal Transduction Histidine Kinase Domain Crystal Structure
-
Ma X, Sayed N, Baskaran P, Beuve A, van den Akker F, (2008) PAS-mediated Dimerization of Soluble Guanylyl Cyclase Revealed by Signal Transduction Histidine Kinase Domain Crystal Structure. J Biol Chem 283: 1167-1178.
-
(2008)
J Biol Chem
, vol.283
, pp. 1167-1178
-
-
Ma, X.1
Sayed, N.2
Baskaran, P.3
Beuve, A.4
van den Akker, F.5
-
29
-
-
34548546911
-
Structural Basis for Light-dependent Signaling in the Dimeric LOV Domain of the Photosensor YtvA
-
Möglich A, Moffat K, (2007) Structural Basis for Light-dependent Signaling in the Dimeric LOV Domain of the Photosensor YtvA. J Mol Biol 373: 112-126.
-
(2007)
J Mol Biol
, vol.373
, pp. 112-126
-
-
Möglich, A.1
Moffat, K.2
|