-
1
-
-
84871699564
-
Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans
-
Adelman K., Lis J.T. Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans. Nat. Rev. Genet. 2012, 13:720-731.
-
(2012)
Nat. Rev. Genet.
, vol.13
, pp. 720-731
-
-
Adelman, K.1
Lis, J.T.2
-
2
-
-
4444368456
-
Attenuation of estrogen receptor alpha-mediated transcription through estrogen-stimulated recruitment of a negative elongation factor
-
Aiyar S.E., Sun J.L., Blair A.L., Moskaluk C.A., Lu Y.Z., Ye Q.N., Yamaguchi Y., Mukherjee A., Ren D.M., Handa H., Li R. Attenuation of estrogen receptor alpha-mediated transcription through estrogen-stimulated recruitment of a negative elongation factor. Genes. Dev. 2004, 18:2134-2146.
-
(2004)
Genes. Dev.
, vol.18
, pp. 2134-2146
-
-
Aiyar, S.E.1
Sun, J.L.2
Blair, A.L.3
Moskaluk, C.A.4
Lu, Y.Z.5
Ye, Q.N.6
Yamaguchi, Y.7
Mukherjee, A.8
Ren, D.M.9
Handa, H.10
Li, R.11
-
3
-
-
79955005458
-
SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
-
Askarian-Amiri M.E., Crawford J., French J.D., Smart C.E., Smith M.A., Clark M.B., Ru K., Mercer T.R., Thompson E.R., Lakhani S.R., Vargas A.C., Campbell I.G., Brown M.A., Dinger M.E., Mattick J.S. SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer. RNA 2011, 17:878-891.
-
(2011)
RNA
, vol.17
, pp. 878-891
-
-
Askarian-Amiri, M.E.1
Crawford, J.2
French, J.D.3
Smart, C.E.4
Smith, M.A.5
Clark, M.B.6
Ru, K.7
Mercer, T.R.8
Thompson, E.R.9
Lakhani, S.R.10
Vargas, A.C.11
Campbell, I.G.12
Brown, M.A.13
Dinger, M.E.14
Mattick, J.S.15
-
4
-
-
62749085753
-
Breast cancer, estrogen receptor and ligands
-
Bai Z., Gust R. Breast cancer, estrogen receptor and ligands. Arch. Pharm. (Weinheim) 2009, 342:133-149.
-
(2009)
Arch. Pharm. (Weinheim)
, vol.342
, pp. 133-149
-
-
Bai, Z.1
Gust, R.2
-
5
-
-
0001235572
-
Estrogen-responsive element of the human pS2 gene is an imperfectly palindromic sequence
-
Berry M., Nunez A.M., Chambon P. Estrogen-responsive element of the human pS2 gene is an imperfectly palindromic sequence. Proc. Natl. Acad. Sci. USA 1989, 86:1218-1222.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 1218-1222
-
-
Berry, M.1
Nunez, A.M.2
Chambon, P.3
-
6
-
-
33646159513
-
Silencing the transcriptome's dark matter: mechanisms for suppressing translation of intergenic transcripts
-
Bickel K.S., Morris D.R. Silencing the transcriptome's dark matter: mechanisms for suppressing translation of intergenic transcripts. Mol. Cell 2006, 22:309-316.
-
(2006)
Mol. Cell
, vol.22
, pp. 309-316
-
-
Bickel, K.S.1
Morris, D.R.2
-
7
-
-
15444368857
-
Mechanisms of estrogen receptor signaling: convergence of genomic and nongenomic actions on target genes
-
Bjornstrom L., Sjoberg M. Mechanisms of estrogen receptor signaling: convergence of genomic and nongenomic actions on target genes. Mol. Endocrinol. 2005, 19:833-842.
-
(2005)
Mol. Endocrinol.
, vol.19
, pp. 833-842
-
-
Bjornstrom, L.1
Sjoberg, M.2
-
8
-
-
67749106610
-
Synchronous and stochastic patterns of gene activation in the Drosophila embryo
-
Boettiger A.N., Levine M. Synchronous and stochastic patterns of gene activation in the Drosophila embryo. Science 2009, 325:471-473.
-
(2009)
Science
, vol.325
, pp. 471-473
-
-
Boettiger, A.N.1
Levine, M.2
-
9
-
-
79551655285
-
Functional and mechanistic diversity of distal transcription enhancers
-
Bulger M., Groudine M. Functional and mechanistic diversity of distal transcription enhancers. Cell 2011, 144:327-339.
-
(2011)
Cell
, vol.144
, pp. 327-339
-
-
Bulger, M.1
Groudine, M.2
-
10
-
-
84866537702
-
Estrogen receptors in human disease
-
Cadenas C., Bolt H.M. Estrogen receptors in human disease. Arch. Toxicol. 2012, 86:1489-1490.
-
(2012)
Arch. Toxicol.
, vol.86
, pp. 1489-1490
-
-
Cadenas, C.1
Bolt, H.M.2
-
11
-
-
33746600263
-
Estrogen receptor target gene: an evolving concept
-
Carroll J.S., Brown M. Estrogen receptor target gene: an evolving concept. Mol. Endocrinol. 2006, 20:1707-1714.
-
(2006)
Mol. Endocrinol.
, vol.20
, pp. 1707-1714
-
-
Carroll, J.S.1
Brown, M.2
-
12
-
-
0033818205
-
Expression of a subset of steroid receptor cofactors is associated with progesterone receptor expression in meningiomas
-
Carroll R.S., Brown M., Zhang J., DiRenzo J., Font De Mora J., Black P.M. Expression of a subset of steroid receptor cofactors is associated with progesterone receptor expression in meningiomas. Clin. Cancer Res. 2000, 6:3570-3575.
-
(2000)
Clin. Cancer Res.
, vol.6
, pp. 3570-3575
-
-
Carroll, R.S.1
Brown, M.2
Zhang, J.3
DiRenzo, J.4
Font De Mora, J.5
Black, P.M.6
-
13
-
-
22144486551
-
Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1
-
Carroll J.S., Liu X.S., Brodsky A.S., Li W., Meyer C.A., Szary A.J., Eeckhoute J., Shao W., Hestermann E.V., Geistlinger T.R., Fox E.A., Silver P.A., Brown M. Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1. Cell 2005, 122:33-43.
-
(2005)
Cell
, vol.122
, pp. 33-43
-
-
Carroll, J.S.1
Liu, X.S.2
Brodsky, A.S.3
Li, W.4
Meyer, C.A.5
Szary, A.J.6
Eeckhoute, J.7
Shao, W.8
Hestermann, E.V.9
Geistlinger, T.R.10
Fox, E.A.11
Silver, P.A.12
Brown, M.13
-
14
-
-
33750442923
-
Genome-wide analysis of estrogen receptor binding sites
-
Carroll J.S., Meyer C.A., Song J., Li W., Geistlinger T.R., Eeckhoute J., Brodsky A.S., Keeton E.K., Fertuck K.C., Hall G.F., Wang Q., Bekiranov S., Sementchenko V., Fox E.A., Silver P.A., Gingeras T.R., Liu X.S., Brown M. Genome-wide analysis of estrogen receptor binding sites. Nat. Genet. 2006, 38:1289-1297.
-
(2006)
Nat. Genet.
, vol.38
, pp. 1289-1297
-
-
Carroll, J.S.1
Meyer, C.A.2
Song, J.3
Li, W.4
Geistlinger, T.R.5
Eeckhoute, J.6
Brodsky, A.S.7
Keeton, E.K.8
Fertuck, K.C.9
Hall, G.F.10
Wang, Q.11
Bekiranov, S.12
Sementchenko, V.13
Fox, E.A.14
Silver, P.A.15
Gingeras, T.R.16
Liu, X.S.17
Brown, M.18
-
15
-
-
84864941592
-
Breast cancer chemoprevention: old and new approaches
-
Cazzaniga M., Bonanni B. Breast cancer chemoprevention: old and new approaches. J. Biomed. Biotechnol. 2012, 2012:985620.
-
(2012)
J. Biomed. Biotechnol.
, vol.2012
, pp. 985620
-
-
Cazzaniga, M.1
Bonanni, B.2
-
16
-
-
77951900245
-
Genomic analyses of hormone signaling and gene regulation
-
Cheung E., Kraus W.L. Genomic analyses of hormone signaling and gene regulation. Annu. Rev. Physiol. 2010, 72:191-218.
-
(2010)
Annu. Rev. Physiol.
, vol.72
, pp. 191-218
-
-
Cheung, E.1
Kraus, W.L.2
-
17
-
-
0037415688
-
Chromatin exposes intrinsic differences in the transcriptional activities of estrogen receptors alpha and beta
-
Cheung E., Schwabish M.A., Kraus W.L. Chromatin exposes intrinsic differences in the transcriptional activities of estrogen receptors alpha and beta. EMBO J. 2003, 22:600-611.
-
(2003)
EMBO J.
, vol.22
, pp. 600-611
-
-
Cheung, E.1
Schwabish, M.A.2
Kraus, W.L.3
-
18
-
-
41349094797
-
Transcription regulation through promoter-proximal pausing of RNA polymerase II
-
Core L.J., Lis J.T. Transcription regulation through promoter-proximal pausing of RNA polymerase II. Science 2008, 319:1791-1792.
-
(2008)
Science
, vol.319
, pp. 1791-1792
-
-
Core, L.J.1
Lis, J.T.2
-
19
-
-
57849109058
-
Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
-
Core L.J., Waterfall J.J., Lis J.T. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 2008, 322:1845-1848.
-
(2008)
Science
, vol.322
, pp. 1845-1848
-
-
Core, L.J.1
Waterfall, J.J.2
Lis, J.T.3
-
20
-
-
33745014556
-
Genes regulated by estrogen in breast tumor cells in vitro are similarly regulated in vivo in tumor xenografts and human breast tumors
-
Creighton C.J., Cordero K.E., Larios J.M., Miller R.S., Johnson M.D., Chinnaiyan A.M., Lippman M.E., Rae J.M. Genes regulated by estrogen in breast tumor cells in vitro are similarly regulated in vivo in tumor xenografts and human breast tumors. Genome Biol. 2006, 7:R28.
-
(2006)
Genome Biol.
, vol.7
-
-
Creighton, C.J.1
Cordero, K.E.2
Larios, J.M.3
Miller, R.S.4
Johnson, M.D.5
Chinnaiyan, A.M.6
Lippman, M.E.7
Rae, J.M.8
-
21
-
-
84876842759
-
Signaling pathways differentially affect RNA polymerase II initiation, pausing, and elongation rate in cells
-
Danko C.G., Hah N., Luo X., Martins A.L., Core L., Lis J.T., Siepel A., Kraus W.L. Signaling pathways differentially affect RNA polymerase II initiation, pausing, and elongation rate in cells. Mol. Cell 2013, 50:212-222.
-
(2013)
Mol. Cell
, vol.50
, pp. 212-222
-
-
Danko, C.G.1
Hah, N.2
Luo, X.3
Martins, A.L.4
Core, L.5
Lis, J.T.6
Siepel, A.7
Kraus, W.L.8
-
22
-
-
77952908743
-
A large fraction of extragenic RNA pol II transcription sites overlap enhancers
-
De Santa F., Barozzi I., Mietton F., Ghisletti S., Polletti S., Tusi B.K., Muller H., Ragoussis J., Wei C.L., Natoli G. A large fraction of extragenic RNA pol II transcription sites overlap enhancers. PLoS Biol. 2010, 8:e1000384.
-
(2010)
PLoS Biol.
, vol.8
-
-
De Santa, F.1
Barozzi, I.2
Mietton, F.3
Ghisletti, S.4
Polletti, S.5
Tusi, B.K.6
Muller, H.7
Ragoussis, J.8
Wei, C.L.9
Natoli, G.10
-
23
-
-
33644638521
-
Estrogen receptors and human disease
-
Deroo B.J., Korach K.S. Estrogen receptors and human disease. J. Clin. Invest. 2006, 116:561-570.
-
(2006)
J. Clin. Invest.
, vol.116
, pp. 561-570
-
-
Deroo, B.J.1
Korach, K.S.2
-
24
-
-
84865757142
-
Landscape of transcription in human cells
-
Djebali S., Davis C.A., Merkel A., Dobin A., Lassmann T., Mortazavi A., Tanzer A., Lagarde J., Lin W., Schlesinger F., Xue C., Marinov G.K., Khatun J., Williams B.A., Zaleski C., Rozowsky J., Roder M., Kokocinski F., Abdelhamid R.F., Alioto T., Antoshechkin I., Baer M.T., Bar N.S., Batut P., Bell K., Bell I., Chakrabortty S., Chen X., Chrast J., Curado J., Derrien T., Drenkow J., Dumais E., Dumais J., Duttagupta R., Falconnet E., Fastuca M., Fejes-Toth K., Ferreira P., Foissac S., Fullwood M.J., Gao H., Gonzalez D., Gordon A., Gunawardena H., Howald C., Jha S., Johnson R., Kapranov P., King B., Kingswood C., Luo O.J., Park E., Persaud K., Preall J.B., Ribeca P., Risk B., Robyr D., Sammeth M., Schaffer L., See L.H., Shahab A., Skancke J., Suzuki A.M., Takahashi H., Tilgner H., Trout D., Walters N., Wang H., Wrobel J., Yu Y., Ruan X., Hayashizaki Y., Harrow J., Gerstein M., Hubbard T., Reymond A., Antonarakis S.E., Hannon G., Giddings M.C., Ruan Y., Wold B., Carninci P., Guigo R., Gingeras T.R. Landscape of transcription in human cells. Nature 2012, 489:101-108.
-
(2012)
Nature
, vol.489
, pp. 101-108
-
-
Djebali, S.1
Davis, C.A.2
Merkel, A.3
Dobin, A.4
Lassmann, T.5
Mortazavi, A.6
Tanzer, A.7
Lagarde, J.8
Lin, W.9
Schlesinger, F.10
Xue, C.11
Marinov, G.K.12
Khatun, J.13
Williams, B.A.14
Zaleski, C.15
Rozowsky, J.16
Roder, M.17
Kokocinski, F.18
Abdelhamid, R.F.19
Alioto, T.20
Antoshechkin, I.21
Baer, M.T.22
Bar, N.S.23
Batut, P.24
Bell, K.25
Bell, I.26
Chakrabortty, S.27
Chen, X.28
Chrast, J.29
Curado, J.30
Derrien, T.31
Drenkow, J.32
Dumais, E.33
Dumais, J.34
Duttagupta, R.35
Falconnet, E.36
Fastuca, M.37
Fejes-Toth, K.38
Ferreira, P.39
Foissac, S.40
Fullwood, M.J.41
Gao, H.42
Gonzalez, D.43
Gordon, A.44
Gunawardena, H.45
Howald, C.46
Jha, S.47
Johnson, R.48
Kapranov, P.49
King, B.50
Kingswood, C.51
Luo, O.J.52
Park, E.53
Persaud, K.54
Preall, J.B.55
Ribeca, P.56
Risk, B.57
Robyr, D.58
Sammeth, M.59
Schaffer, L.60
See, L.H.61
Shahab, A.62
Skancke, J.63
Suzuki, A.M.64
Takahashi, H.65
Tilgner, H.66
Trout, D.67
Walters, N.68
Wang, H.69
Wrobel, J.70
Yu, Y.71
Ruan, X.72
Hayashizaki, Y.73
Harrow, J.74
Gerstein, M.75
Hubbard, T.76
Reymond, A.77
Antonarakis, S.E.78
Hannon, G.79
Giddings, M.C.80
Ruan, Y.81
Wold, B.82
Carninci, P.83
Guigo, R.84
Gingeras, T.R.85
more..
-
25
-
-
84855286273
-
Mechanisms establishing TLR4-responsive activation states of inflammatory response genes
-
Escoubet-Lozach L., Benner C., Kaikkonen M.U., Lozach J., Heinz S., Spann N.J., Crotti A., Stender J., Ghisletti S., Reichart D., Cheng C.S., Luna R., Ludka C., Sasik R., Garcia-Bassets I., Hoffmann A., Subramaniam S., Hardiman G., Rosenfeld M.G., Glass C.K. Mechanisms establishing TLR4-responsive activation states of inflammatory response genes. PLoS Genet. 2011, 7:e1002401.
-
(2011)
PLoS Genet.
, vol.7
-
-
Escoubet-Lozach, L.1
Benner, C.2
Kaikkonen, M.U.3
Lozach, J.4
Heinz, S.5
Spann, N.J.6
Crotti, A.7
Stender, J.8
Ghisletti, S.9
Reichart, D.10
Cheng, C.S.11
Luna, R.12
Ludka, C.13
Sasik, R.14
Garcia-Bassets, I.15
Hoffmann, A.16
Subramaniam, S.17
Hardiman, G.18
Rosenfeld, M.G.19
Glass, C.K.20
more..
-
26
-
-
70449103609
-
An oestrogen-receptor-alpha-bound human chromatin interactome
-
Fullwood M.J., Liu M.H., Pan Y.F., Liu J., Xu H., Mohamed Y.B., Orlov Y.L., Velkov S., Ho A., Mei P.H., Chew E.G., Huang P.Y., Welboren W.J., Han Y., Ooi H.S., Ariyaratne P.N., Vega V.B., Luo Y., Tan P.Y., Choy P.Y., Wansa K.D., Zhao B., Lim K.S., Leow S.C., Yow J.S., Joseph R., Li H., Desai K.V., Thomsen J.S., Lee Y.K., Karuturi R.K., Herve T., Bourque G., Stunnenberg H.G., Ruan X., Cacheux-Rataboul V., Sung W.K., Liu E.T., Wei C.L., Cheung E., Ruan Y. An oestrogen-receptor-alpha-bound human chromatin interactome. Nature 2009, 462:58-64.
-
(2009)
Nature
, vol.462
, pp. 58-64
-
-
Fullwood, M.J.1
Liu, M.H.2
Pan, Y.F.3
Liu, J.4
Xu, H.5
Mohamed, Y.B.6
Orlov, Y.L.7
Velkov, S.8
Ho, A.9
Mei, P.H.10
Chew, E.G.11
Huang, P.Y.12
Welboren, W.J.13
Han, Y.14
Ooi, H.S.15
Ariyaratne, P.N.16
Vega, V.B.17
Luo, Y.18
Tan, P.Y.19
Choy, P.Y.20
Wansa, K.D.21
Zhao, B.22
Lim, K.S.23
Leow, S.C.24
Yow, J.S.25
Joseph, R.26
Li, H.27
Desai, K.V.28
Thomsen, J.S.29
Lee, Y.K.30
Karuturi, R.K.31
Herve, T.32
Bourque, G.33
Stunnenberg, H.G.34
Ruan, X.35
Cacheux-Rataboul, V.36
Sung, W.K.37
Liu, E.T.38
Wei, C.L.39
Cheung, E.40
Ruan, Y.41
more..
-
27
-
-
84888377963
-
Identification and functional characterization of estrogen-regulated long noncoding RNAs in breast cancer cells: from genomics to molecular and cellular biology
-
SUN-565
-
Gadad S.S., Sun M., Kraus W.L. Identification and functional characterization of estrogen-regulated long noncoding RNAs in breast cancer cells: from genomics to molecular and cellular biology. Endocr. Rev. 2012, 33:SUN-565.
-
(2012)
Endocr. Rev.
, vol.33
-
-
Gadad, S.S.1
Sun, M.2
Kraus, W.L.3
-
28
-
-
33645823589
-
A noncoding RNA is a potential marker of cell fate during mammary gland development
-
Ginger M.R., Shore A.N., Contreras A., Rijnkels M., Miller J., Gonzalez-Rimbau M.F., Rosen J.M. A noncoding RNA is a potential marker of cell fate during mammary gland development. Proc. Natl. Acad. Sci. USA 2006, 103:5781-5786.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 5781-5786
-
-
Ginger, M.R.1
Shore, A.N.2
Contreras, A.3
Rijnkels, M.4
Miller, J.5
Gonzalez-Rimbau, M.F.6
Rosen, J.M.7
-
29
-
-
79955836460
-
A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells
-
Hah N., Danko C.G., Core L., Waterfall J.J., Siepel A., Lis J.T., Kraus W.L. A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells. Cell 2011, 145:622-634.
-
(2011)
Cell
, vol.145
, pp. 622-634
-
-
Hah, N.1
Danko, C.G.2
Core, L.3
Waterfall, J.J.4
Siepel, A.5
Lis, J.T.6
Kraus, W.L.7
-
30
-
-
84881171344
-
Enhancer transcripts mark active estrogen receptor binding sites
-
Hah N., Murakami S., Nagari A., Danko C., Kraus W.L. Enhancer transcripts mark active estrogen receptor binding sites. Genome Res. 2013, 23. http://dx.doi.org/10.1101/gr.152306.112.
-
(2013)
Genome Res.
, vol.23
-
-
Hah, N.1
Murakami, S.2
Nagari, A.3
Danko, C.4
Kraus, W.L.5
-
31
-
-
0035813112
-
The multifaceted mechanisms of estradiol and estrogen receptor signaling
-
Hall J.M., Couse J.F., Korach K.S. The multifaceted mechanisms of estradiol and estrogen receptor signaling. J. Biol. Chem. 2001, 276:36869-36872.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 36869-36872
-
-
Hall, J.M.1
Couse, J.F.2
Korach, K.S.3
-
32
-
-
37349081370
-
Extranuclear steroid receptors: nature and actions
-
Hammes S.R., Levin E.R. Extranuclear steroid receptors: nature and actions. Endocr. Rev. 2007, 28:726-741.
-
(2007)
Endocr. Rev.
, vol.28
, pp. 726-741
-
-
Hammes, S.R.1
Levin, E.R.2
-
33
-
-
82355163442
-
Minireview: recent advances in extranuclear steroid receptor actions
-
Hammes S.R., Levin E.R. Minireview: recent advances in extranuclear steroid receptor actions. Endocrinology 2011, 152:4489-4495.
-
(2011)
Endocrinology
, vol.152
, pp. 4489-4495
-
-
Hammes, S.R.1
Levin, E.R.2
-
34
-
-
0042934090
-
Activities of estrogen receptor alpha- and beta-selective ligands at diverse estrogen responsive gene sites mediating transactivation or transrepression
-
Harrington W.R., Sheng S., Barnett D.H., Petz L.N., Katzenellenbogen J.A., Katzenellenbogen B.S. Activities of estrogen receptor alpha- and beta-selective ligands at diverse estrogen responsive gene sites mediating transactivation or transrepression. Mol. Cell. Endocrinol. 2003, 206:13-22.
-
(2003)
Mol. Cell. Endocrinol.
, vol.206
, pp. 13-22
-
-
Harrington, W.R.1
Sheng, S.2
Barnett, D.H.3
Petz, L.N.4
Katzenellenbogen, J.A.5
Katzenellenbogen, B.S.6
-
35
-
-
84872405841
-
Dynamic phosphorylation patterns of RNA polymerase II CTD during transcription
-
Heidemann M., Hintermair C., Voss K., Eick D. Dynamic phosphorylation patterns of RNA polymerase II CTD during transcription. Biochim. Biophys. Acta 2013, 1829:55-62.
-
(2013)
Biochim. Biophys. Acta
, vol.1829
, pp. 55-62
-
-
Heidemann, M.1
Hintermair, C.2
Voss, K.3
Eick, D.4
-
36
-
-
79953765128
-
Multiple sequence-specific DNA-binding proteins mediate estrogen receptor signaling through a tethering pathway
-
Heldring N., Isaacs G.D., Diehl A.G., Sun M., Cheung E., Ranish J.A., Kraus W.L. Multiple sequence-specific DNA-binding proteins mediate estrogen receptor signaling through a tethering pathway. Mol. Endocrinol. 2011, 25:564-574.
-
(2011)
Mol. Endocrinol.
, vol.25
, pp. 564-574
-
-
Heldring, N.1
Isaacs, G.D.2
Diehl, A.G.3
Sun, M.4
Cheung, E.5
Ranish, J.A.6
Kraus, W.L.7
-
37
-
-
0025769412
-
Primary response genes induced by growth factors and tumor promoters
-
Herschman H.R. Primary response genes induced by growth factors and tumor promoters. Annu. Rev. Biochem. 1991, 60:281-319.
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 281-319
-
-
Herschman, H.R.1
-
38
-
-
77952966794
-
Estrogen-mediated epigenetic repression of large chromosomal regions through DNA looping
-
Hsu P.Y., Hsu H.K., Singer G.A., Yan P.S., Rodriguez B.A., Liu J.C., Weng Y.I., Deatherage D.E., Chen Z., Pereira J.S., Lopez R., Russo J., Wang Q., Lamartiniere C.A., Nephew K.P., Huang T.H. Estrogen-mediated epigenetic repression of large chromosomal regions through DNA looping. Genome Res. 2010, 20:733-744.
-
(2010)
Genome Res.
, vol.20
, pp. 733-744
-
-
Hsu, P.Y.1
Hsu, H.K.2
Singer, G.A.3
Yan, P.S.4
Rodriguez, B.A.5
Liu, J.C.6
Weng, Y.I.7
Deatherage, D.E.8
Chen, Z.9
Pereira, J.S.10
Lopez, R.11
Russo, J.12
Wang, Q.13
Lamartiniere, C.A.14
Nephew, K.P.15
Huang, T.H.16
-
39
-
-
78651250284
-
FOXA1 is a key determinant of estrogen receptor function and endocrine response
-
Hurtado A., Holmes K.A., Ross-Innes C.S., Schmidt D., Carroll J.S. FOXA1 is a key determinant of estrogen receptor function and endocrine response. Nat. Genet. 2011, 43:27-33.
-
(2011)
Nat. Genet.
, vol.43
, pp. 27-33
-
-
Hurtado, A.1
Holmes, K.A.2
Ross-Innes, C.S.3
Schmidt, D.4
Carroll, J.S.5
-
40
-
-
0034466972
-
Estrogen receptor transcription and transactivation: estrogen receptor alpha and estrogen receptor beta: regulation by selective estrogen receptor modulators and importance in breast cancer
-
Katzenellenbogen B.S., Katzenellenbogen J.A. Estrogen receptor transcription and transactivation: estrogen receptor alpha and estrogen receptor beta: regulation by selective estrogen receptor modulators and importance in breast cancer. Breast Cancer Res. 2000, 2:335-344.
-
(2000)
Breast Cancer Res.
, vol.2
, pp. 335-344
-
-
Katzenellenbogen, B.S.1
Katzenellenbogen, J.A.2
-
41
-
-
78649401946
-
Dax1 up-regulates Oct4 expression in mouse embryonic stem cells via LRH-1 and SRA
-
Kelly V.R., Xu B., Kuick R., Koenig R.J., Hammer G.D. Dax1 up-regulates Oct4 expression in mouse embryonic stem cells via LRH-1 and SRA. Mol. Endocrinol. 2010, 24:2281-2291.
-
(2010)
Mol. Endocrinol.
, vol.24
, pp. 2281-2291
-
-
Kelly, V.R.1
Xu, B.2
Kuick, R.3
Koenig, R.J.4
Hammer, G.D.5
-
42
-
-
77952367798
-
Widespread transcription at neuronal activity-regulated enhancers
-
Kim T.K., Hemberg M., Gray J.M., Costa A.M., Bear D.M., Wu J., Harmin D.A., Laptewicz M., Barbara-Haley K., Kuersten S., Markenscoff-Papadimitriou E., Kuhl D., Bito H., Worley P.F., Kreiman G., Greenberg M.E. Widespread transcription at neuronal activity-regulated enhancers. Nature 2010, 465:182-187.
-
(2010)
Nature
, vol.465
, pp. 182-187
-
-
Kim, T.K.1
Hemberg, M.2
Gray, J.M.3
Costa, A.M.4
Bear, D.M.5
Wu, J.6
Harmin, D.A.7
Laptewicz, M.8
Barbara-Haley, K.9
Kuersten, S.10
Markenscoff-Papadimitriou, E.11
Kuhl, D.12
Bito, H.13
Worley, P.F.14
Kreiman, G.15
Greenberg, M.E.16
-
43
-
-
41649102323
-
A global view of transcriptional regulation by nuclear receptors: gene expression, factor localization, and DNA sequence analysis
-
Kininis M., Kraus W.L. A global view of transcriptional regulation by nuclear receptors: gene expression, factor localization, and DNA sequence analysis. Nucl. Recept. Signal. 2008, 6:e005.
-
(2008)
Nucl. Recept. Signal.
, vol.6
-
-
Kininis, M.1
Kraus, W.L.2
-
44
-
-
61749092693
-
Postrecruitment regulation of RNA polymerase II directs rapid signaling responses at the promoters of estrogen target genes
-
Kininis M., Isaacs G.D., Core L.J., Hah N., Kraus W.L. Postrecruitment regulation of RNA polymerase II directs rapid signaling responses at the promoters of estrogen target genes. Mol. Cell. Biol. 2009, 29:1123-1133.
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 1123-1133
-
-
Kininis, M.1
Isaacs, G.D.2
Core, L.J.3
Hah, N.4
Kraus, W.L.5
-
45
-
-
77951638287
-
Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor
-
Kino T., Hurt D.E., Ichijo T., Nader N., Chrousos G.P. Noncoding RNA gas5 is a growth arrest- and starvation-associated repressor of the glucocorticoid receptor. Sci. Signal 2010, 3:ra8.
-
(2010)
Sci. Signal
, vol.3
-
-
Kino, T.1
Hurt, D.E.2
Ichijo, T.3
Nader, N.4
Chrousos, G.P.5
-
46
-
-
84855508402
-
Enhancers and silencers: an integrated and simple model for their function
-
Kolovos P., Knoch T.A., Grosveld F.G., Cook P.R., Papantonis A. Enhancers and silencers: an integrated and simple model for their function. Epigenetics Chromatin 2012, 5:1.
-
(2012)
Epigenetics Chromatin
, vol.5
, pp. 1
-
-
Kolovos, P.1
Knoch, T.A.2
Grosveld, F.G.3
Cook, P.R.4
Papantonis, A.5
-
47
-
-
77955902024
-
The widespread regulation of microRNA biogenesis, function and decay
-
Krol J., Loedige I., Filipowicz W. The widespread regulation of microRNA biogenesis, function and decay. Nat. Rev. Genet. 2010, 11:597-610.
-
(2010)
Nat. Rev. Genet.
, vol.11
, pp. 597-610
-
-
Krol, J.1
Loedige, I.2
Filipowicz, W.3
-
48
-
-
0023808861
-
The estrogen receptor binds tightly to its responsive element as a ligand-induced homodimer
-
Kumar V., Chambon P. The estrogen receptor binds tightly to its responsive element as a ligand-induced homodimer. Cell 1988, 55:145-156.
-
(1988)
Cell
, vol.55
, pp. 145-156
-
-
Kumar, V.1
Chambon, P.2
-
49
-
-
0034735861
-
Estrogen receptor pathways to AP-1
-
Kushner P.J., Agard D.A., Greene G.L., Scanlan T.S., Shiau A.K., Uht R.M., Webb P. Estrogen receptor pathways to AP-1. J. Steroid Biochem. Mol. Biol. 2000, 74:311-317.
-
(2000)
J. Steroid Biochem. Mol. Biol.
, vol.74
, pp. 311-317
-
-
Kushner, P.J.1
Agard, D.A.2
Greene, G.L.3
Scanlan, T.S.4
Shiau, A.K.5
Uht, R.M.6
Webb, P.7
-
50
-
-
84874368349
-
Activating RNAs associate with Mediator to enhance chromatin architecture and transcription
-
Lai F., Orom U.A., Cesaroni M., Beringer M., Taatjes D.J., Blobel G.A., Shiekhattar R. Activating RNAs associate with Mediator to enhance chromatin architecture and transcription. Nature 2013, 494:497-501.
-
(2013)
Nature
, vol.494
, pp. 497-501
-
-
Lai, F.1
Orom, U.A.2
Cesaroni, M.3
Beringer, M.4
Taatjes, D.J.5
Blobel, G.A.6
Shiekhattar, R.7
-
51
-
-
84879694221
-
Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription
-
Lam M.T., Cho H., Lesch H.P., Gosselin D., Heinz S., Tanaka-Oishi Y., Benner C., Kaikkonen M.U., Kim A.S., Kosaka M., Lee C.Y., Watt A., Grossman T.R., Rosenfeld M.G., Evans R.M., Glass C.K. Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription. Nature 2013.
-
(2013)
Nature
-
-
Lam, M.T.1
Cho, H.2
Lesch, H.P.3
Gosselin, D.4
Heinz, S.5
Tanaka-Oishi, Y.6
Benner, C.7
Kaikkonen, M.U.8
Kim, A.S.9
Kosaka, M.10
Lee, C.Y.11
Watt, A.12
Grossman, T.R.13
Rosenfeld, M.G.14
Evans, R.M.15
Glass, C.K.16
-
52
-
-
84871069553
-
Epigenetic regulation by long noncoding RNAs
-
Lee J.T. Epigenetic regulation by long noncoding RNAs. Science 2012, 338:1435-1439.
-
(2012)
Science
, vol.338
, pp. 1435-1439
-
-
Lee, J.T.1
-
53
-
-
70450197247
-
Membrane oestrogen receptor alpha signalling to cell functions
-
Levin E.R. Membrane oestrogen receptor alpha signalling to cell functions. J. Physiol. 2009, 587:5019-5023.
-
(2009)
J. Physiol.
, vol.587
, pp. 5019-5023
-
-
Levin, E.R.1
-
54
-
-
84862908850
-
Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation
-
Li G., Ruan X., Auerbach R.K., Sandhu K.S., Zheng M., Wang P., Poh H.M., Goh Y., Lim J., Zhang J., Sim H.S., Peh S.Q., Mulawadi F.H., Ong C.T., Orlov Y.L., Hong S., Zhang Z., Landt S., Raha D., Euskirchen G., Wei C.L., Ge W., Wang H., Davis C., Fisher-Aylor K.I., Mortazavi A., Gerstein M., Gingeras T., Wold B., Sun Y., Fullwood M.J., Cheung E., Liu E., Sung W.K., Snyder M., Ruan Y. Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation. Cell 2012, 148:84-98.
-
(2012)
Cell
, vol.148
, pp. 84-98
-
-
Li, G.1
Ruan, X.2
Auerbach, R.K.3
Sandhu, K.S.4
Zheng, M.5
Wang, P.6
Poh, H.M.7
Goh, Y.8
Lim, J.9
Zhang, J.10
Sim, H.S.11
Peh, S.Q.12
Mulawadi, F.H.13
Ong, C.T.14
Orlov, Y.L.15
Hong, S.16
Zhang, Z.17
Landt, S.18
Raha, D.19
Euskirchen, G.20
Wei, C.L.21
Ge, W.22
Wang, H.23
Davis, C.24
Fisher-Aylor, K.I.25
Mortazavi, A.26
Gerstein, M.27
Gingeras, T.28
Wold, B.29
Sun, Y.30
Fullwood, M.J.31
Cheung, E.32
Liu, E.33
Sung, W.K.34
Snyder, M.35
Ruan, Y.36
more..
-
55
-
-
84879695128
-
Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation
-
Li W., Notani D., Ma Q., Tanasa B., Nunez E., Chen A.Y., Merkurjev D., Zhang J., Ohgi K., Song X., Oh S., Kim H.S., Glass C.K., Rosenfeld M.G. Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation. Nature 2013.
-
(2013)
Nature
-
-
Li, W.1
Notani, D.2
Ma, Q.3
Tanasa, B.4
Nunez, E.5
Chen, A.Y.6
Merkurjev, D.7
Zhang, J.8
Ohgi, K.9
Song, X.10
Oh, S.11
Kim, H.S.12
Glass, C.K.13
Rosenfeld, M.G.14
-
56
-
-
9144258171
-
Discovery of estrogen receptor alpha target genes and response elements in breast tumor cells
-
Lin C.Y., Strom A., Vega V.B., Kong S.L., Yeo A.L., Thomsen J.S., Chan W.C., Doray B., Bangarusamy D.K., Ramasamy A., Vergara L.A., Tang S., Chong A., Bajic V.B., Miller L.D., Gustafsson J.A., Liu E.T. Discovery of estrogen receptor alpha target genes and response elements in breast tumor cells. Genome Biol. 2004, 5:R66.
-
(2004)
Genome Biol.
, vol.5
-
-
Lin, C.Y.1
Strom, A.2
Vega, V.B.3
Kong, S.L.4
Yeo, A.L.5
Thomsen, J.S.6
Chan, W.C.7
Doray, B.8
Bangarusamy, D.K.9
Ramasamy, A.10
Vergara, L.A.11
Tang, S.12
Chong, A.13
Bajic, V.B.14
Miller, L.D.15
Gustafsson, J.A.16
Liu, E.T.17
-
57
-
-
34347345081
-
Whole-genome cartography of estrogen receptor alpha binding sites
-
Lin C.Y., Vega V.B., Thomsen J.S., Zhang T., Kong S.L., Xie M., Chiu K.P., Lipovich L., Barnett D.H., Stossi F., Yeo A., George J., Kuznetsov V.A., Lee Y.K., Charn T.H., Palanisamy N., Miller L.D., Cheung E., Katzenellenbogen B.S., Ruan Y., Bourque G., Wei C.L., Liu E.T. Whole-genome cartography of estrogen receptor alpha binding sites. PLoS Genet. 2007, 3:e87.
-
(2007)
PLoS Genet.
, vol.3
-
-
Lin, C.Y.1
Vega, V.B.2
Thomsen, J.S.3
Zhang, T.4
Kong, S.L.5
Xie, M.6
Chiu, K.P.7
Lipovich, L.8
Barnett, D.H.9
Stossi, F.10
Yeo, A.11
George, J.12
Kuznetsov, V.A.13
Lee, Y.K.14
Charn, T.H.15
Palanisamy, N.16
Miller, L.D.17
Cheung, E.18
Katzenellenbogen, B.S.19
Ruan, Y.20
Bourque, G.21
Wei, C.L.22
Liu, E.T.23
more..
-
58
-
-
84873456575
-
ERNAs are required for p53-dependent enhancer activity and gene transcription
-
Melo C.A., Drost J., Wijchers P.J., van de Werken H., de Wit E., Oude Vrielink J.A., Elkon R., Melo S.A., Leveille N., Kalluri R., de Laat W., Agami R. ERNAs are required for p53-dependent enhancer activity and gene transcription. Mol. Cell 2013, 49:524-535.
-
(2013)
Mol. Cell
, vol.49
, pp. 524-535
-
-
Melo, C.A.1
Drost, J.2
Wijchers, P.J.3
van de Werken, H.4
de Wit, E.5
Oude Vrielink, J.A.6
Elkon, R.7
Melo, S.A.8
Leveille, N.9
Kalluri, R.10
de Laat, W.11
Agami, R.12
-
59
-
-
84875183056
-
Structure and function of long noncoding RNAs in epigenetic regulation
-
Mercer T.R., Mattick J.S. Structure and function of long noncoding RNAs in epigenetic regulation. Nat. Struct. Mol. Biol. 2013, 20:300-307.
-
(2013)
Nat. Struct. Mol. Biol.
, vol.20
, pp. 300-307
-
-
Mercer, T.R.1
Mattick, J.S.2
-
60
-
-
84870182699
-
Noncoding transcription at enhancers: general principles and functional models
-
Natoli G., Andrau J.C. Noncoding transcription at enhancers: general principles and functional models. Annu. Rev. Genet. 2012, 46:1-19.
-
(2012)
Annu. Rev. Genet.
, vol.46
, pp. 1-19
-
-
Natoli, G.1
Andrau, J.C.2
-
61
-
-
79952901680
-
Enhancer function: new insights into the regulation of tissue-specific gene expression
-
Ong C.T., Corces V.G. Enhancer function: new insights into the regulation of tissue-specific gene expression. Nat. Rev. Genet. 2011, 12:283-293.
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 283-293
-
-
Ong, C.T.1
Corces, V.G.2
-
62
-
-
80052815461
-
Noncoding RNAs and enhancers: complications of a long-distance relationship
-
Orom U.A., Shiekhattar R. Noncoding RNAs and enhancers: complications of a long-distance relationship. Trends Genet. 2011, 27:433-439.
-
(2011)
Trends Genet.
, vol.27
, pp. 433-439
-
-
Orom, U.A.1
Shiekhattar, R.2
-
64
-
-
15544379599
-
Estrogen-receptor biology: continuing progress and therapeutic implications
-
Osborne C.K., Schiff R. Estrogen-receptor biology: continuing progress and therapeutic implications. J. Clin. Oncol. 2005, 23:1616-1622.
-
(2005)
J. Clin. Oncol.
, vol.23
, pp. 1616-1622
-
-
Osborne, C.K.1
Schiff, R.2
-
65
-
-
57749083496
-
Regulation of estrogen receptor-mediated long range transcription via evolutionarily conserved distal response elements
-
Pan Y.F., Wansa K.D., Liu M.H., Zhao B., Hong S.Z., Tan P.Y., Lim K.S., Bourque G., Liu E.T., Cheung E. Regulation of estrogen receptor-mediated long range transcription via evolutionarily conserved distal response elements. J. Biol. Chem. 2008, 283:32977-32988.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 32977-32988
-
-
Pan, Y.F.1
Wansa, K.D.2
Liu, M.H.3
Zhao, B.4
Hong, S.Z.5
Tan, P.Y.6
Lim, K.S.7
Bourque, G.8
Liu, E.T.9
Cheung, E.10
-
66
-
-
8344275588
-
The biological role of estrogen receptors alpha and beta in cancer
-
Pearce S.T., Jordan V.C. The biological role of estrogen receptors alpha and beta in cancer. Crit. Rev. Oncol. Hematol. 2004, 50:3-22.
-
(2004)
Crit. Rev. Oncol. Hematol.
, vol.50
, pp. 3-22
-
-
Pearce, S.T.1
Jordan, V.C.2
-
67
-
-
0034918190
-
Tissue-specific expression pattern of estrogen receptors (ER): quantification of ER alpha and ER beta mRNA with real-time RT-PCR
-
Pfaffl M.W., Lange I.G., Daxenberger A., Meyer H.H. Tissue-specific expression pattern of estrogen receptors (ER): quantification of ER alpha and ER beta mRNA with real-time RT-PCR. APMIS 2001, 109:345-355.
-
(2001)
APMIS
, vol.109
, pp. 345-355
-
-
Pfaffl, M.W.1
Lange, I.G.2
Daxenberger, A.3
Meyer, H.H.4
-
68
-
-
2942676455
-
Estrogens and their receptors in breast cancer progression: a dual role in cancer proliferation and invasion
-
Platet N., Cathiard A.M., Gleizes M., Garcia M. Estrogens and their receptors in breast cancer progression: a dual role in cancer proliferation and invasion. Crit. Rev. Oncol. Hematol. 2004, 51:55-67.
-
(2004)
Crit. Rev. Oncol. Hematol.
, vol.51
, pp. 55-67
-
-
Platet, N.1
Cathiard, A.M.2
Gleizes, M.3
Garcia, M.4
-
70
-
-
84861904178
-
Genome regulation by long noncoding RNAs
-
Rinn J.L., Chang H.Y. Genome regulation by long noncoding RNAs. Annu. Rev. Biochem. 2012, 81:145-166.
-
(2012)
Annu. Rev. Biochem.
, vol.81
, pp. 145-166
-
-
Rinn, J.L.1
Chang, H.Y.2
-
71
-
-
0032052261
-
Estrogen receptor mediated inhibition of cancer cell invasion and motility: an overview
-
Rochefort H., Platet N., Hayashido Y., Derocq D., Lucas A., Cunat S., Garcia M. Estrogen receptor mediated inhibition of cancer cell invasion and motility: an overview. J. Steroid Biochem. Mol. Biol. 1998, 65:163-168.
-
(1998)
J. Steroid Biochem. Mol. Biol.
, vol.65
, pp. 163-168
-
-
Rochefort, H.1
Platet, N.2
Hayashido, Y.3
Derocq, D.4
Lucas, A.5
Cunat, S.6
Garcia, M.7
-
72
-
-
69249215400
-
Divergent transcription: a new feature of active promoters
-
Seila A.C., Core L.J., Lis J.T., Sharp P.A. Divergent transcription: a new feature of active promoters. Cell Cycle 2009, 8:2557-2564.
-
(2009)
Cell Cycle
, vol.8
, pp. 2557-2564
-
-
Seila, A.C.1
Core, L.J.2
Lis, J.T.3
Sharp, P.A.4
-
73
-
-
84858700038
-
Noncoding RNAs involved in mammary gland development and tumorigenesis: there's a long way to go
-
Shore A.N., Herschkowitz J.I., Rosen J.M. Noncoding RNAs involved in mammary gland development and tumorigenesis: there's a long way to go. J. Mammary Gland Biol. Neoplasia 2012, 17:43-58.
-
(2012)
J. Mammary Gland Biol. Neoplasia
, vol.17
, pp. 43-58
-
-
Shore, A.N.1
Herschkowitz, J.I.2
Rosen, J.M.3
-
74
-
-
84874248583
-
Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells
-
Sigova A.A., Mullen A.C., Molinie B., Gupta S., Orlando D.A., Guenther M.G., Almada A.E., Lin C., Sharp P.A., Giallourakis C.C., Young R.A. Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells. Proc. Natl. Acad. Sci. USA 2013, 110:2876-2881.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 2876-2881
-
-
Sigova, A.A.1
Mullen, A.C.2
Molinie, B.3
Gupta, S.4
Orlando, D.A.5
Guenther, M.G.6
Almada, A.E.7
Lin, C.8
Sharp, P.A.9
Giallourakis, C.C.10
Young, R.A.11
-
75
-
-
84863763618
-
Whole transcriptome RNA-Seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue
-
Sinicropi D., Qu K., Collin F., Crager M., Liu M.L., Pelham R.J., Pho M., Rossi A.D., Jeong J., Scott A., Ambannavar R., Zheng C., Mena R., Esteban J., Stephans J., Morlan J., Baker J. Whole transcriptome RNA-Seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue. PLoS One 2012, 7:e40092.
-
(2012)
PLoS One
, vol.7
-
-
Sinicropi, D.1
Qu, K.2
Collin, F.3
Crager, M.4
Liu, M.L.5
Pelham, R.J.6
Pho, M.7
Rossi, A.D.8
Jeong, J.9
Scott, A.10
Ambannavar, R.11
Zheng, C.12
Mena, R.13
Esteban, J.14
Stephans, J.15
Morlan, J.16
Baker, J.17
-
76
-
-
84867900638
-
Long non-coding RNAs and cancer: a new frontier of translational research?
-
Spizzo R., Almeida M.I., Colombatti A., Calin G.A. Long non-coding RNAs and cancer: a new frontier of translational research?. Oncogene 2012, 31:4577-4587.
-
(2012)
Oncogene
, vol.31
, pp. 4577-4587
-
-
Spizzo, R.1
Almeida, M.I.2
Colombatti, A.3
Calin, G.A.4
-
77
-
-
77955629953
-
Genome-wide analysis of estrogen receptor alpha DNA binding and tethering mechanisms identifies Runx1 as a novel tethering factor in receptor-mediated transcriptional activation
-
Stender J.D., Kim K., Charn T.H., Komm B., Chang K.C., Kraus W.L., Benner C., Glass C.K., Katzenellenbogen B.S. Genome-wide analysis of estrogen receptor alpha DNA binding and tethering mechanisms identifies Runx1 as a novel tethering factor in receptor-mediated transcriptional activation. Mol. Cell. Biol. 2010, 30:3943-3955.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 3943-3955
-
-
Stender, J.D.1
Kim, K.2
Charn, T.H.3
Komm, B.4
Chang, K.C.5
Kraus, W.L.6
Benner, C.7
Glass, C.K.8
Katzenellenbogen, B.S.9
-
78
-
-
84888390662
-
Characterization of estrogen-regulated non-coding RNAs
-
(OR14-2)
-
Sun M., Danko G.G., Gadad S.S., Hah N., Kraus W.L. Characterization of estrogen-regulated non-coding RNAs. Endocr. Rev. 2011, 32. (OR14-2).
-
(2011)
Endocr. Rev.
, vol.32
-
-
Sun, M.1
Danko, G.G.2
Gadad, S.S.3
Hah, N.4
Kraus, W.L.5
-
79
-
-
84874500772
-
Long noncoding RNAs regulate adipogenesis
-
Sun L., Goff L.A., Trapnell C., Alexander R., Lo K.A., Hacisuleyman E., Sauvageau M., Tazon-Vega B., Kelley D.R., Hendrickson D.G., Yuan B., Kellis M., Lodish H.F., Rinn J.L. Long noncoding RNAs regulate adipogenesis. Proc. Natl. Acad. Sci. USA 2013, 110:3387-3392.
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 3387-3392
-
-
Sun, L.1
Goff, L.A.2
Trapnell, C.3
Alexander, R.4
Lo, K.A.5
Hacisuleyman, E.6
Sauvageau, M.7
Tazon-Vega, B.8
Kelley, D.R.9
Hendrickson, D.G.10
Yuan, B.11
Kellis, M.12
Lodish, H.F.13
Rinn, J.L.14
-
80
-
-
79960072084
-
AP-2gamma regulates oestrogen receptor-mediated long-range chromatin interaction and gene transcription
-
Tan S.K., Lin Z.H., Chang C.W., Varang V., Chng K.R., Pan Y.F., Yong E.L., Sung W.K., Cheung E. AP-2gamma regulates oestrogen receptor-mediated long-range chromatin interaction and gene transcription. EMBO J. 2011, 30:2569-2581.
-
(2011)
EMBO J.
, vol.30
, pp. 2569-2581
-
-
Tan, S.K.1
Lin, Z.H.2
Chang, C.W.3
Varang, V.4
Chng, K.R.5
Pan, Y.F.6
Yong, E.L.7
Sung, W.K.8
Cheung, E.9
-
81
-
-
57749195712
-
RNA-Seq: a revolutionary tool for transcriptomics
-
Wang Z., Gerstein M., Snyder M. RNA-Seq: a revolutionary tool for transcriptomics. Nat. Rev. Genet. 2009, 10:57-63.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
82
-
-
79959198166
-
Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA
-
Wang D., Garcia-Bassets I., Benner C., Li W., Su X., Zhou Y., Qiu J., Liu W., Kaikkonen M.U., Ohgi K.A., Glass C.K., Rosenfeld M.G., Fu X.D. Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA. Nature 2011, 474:390-394.
-
(2011)
Nature
, vol.474
, pp. 390-394
-
-
Wang, D.1
Garcia-Bassets, I.2
Benner, C.3
Li, W.4
Su, X.5
Zhou, Y.6
Qiu, J.7
Liu, W.8
Kaikkonen, M.U.9
Ohgi, K.A.10
Glass, C.K.11
Rosenfeld, M.G.12
Fu, X.D.13
-
83
-
-
79957840356
-
Long noncoding RNAs and human disease
-
Wapinski O., Chang H.Y. Long noncoding RNAs and human disease. Trends Cell Biol. 2011, 21:354-361.
-
(2011)
Trends Cell Biol.
, vol.21
, pp. 354-361
-
-
Wapinski, O.1
Chang, H.Y.2
-
85
-
-
66549085342
-
ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands
-
Welboren W.J., van Driel M.A., Janssen-Megens E.M., van Heeringen S.J., Sweep F.C., Span P.N., Stunnenberg H.G. ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands. EMBO J. 2009, 28:1418-1428.
-
(2009)
EMBO J.
, vol.28
, pp. 1418-1428
-
-
Welboren, W.J.1
van Driel, M.A.2
Janssen-Megens, E.M.3
van Heeringen, S.J.4
Sweep, F.C.5
Span, P.N.6
Stunnenberg, H.G.7
-
86
-
-
72549085551
-
Genomic actions of estrogen receptor alpha: what are the targets and how are they regulated?
-
Welboren W.J., Sweep F.C., Span P.N., Stunnenberg H.G. Genomic actions of estrogen receptor alpha: what are the targets and how are they regulated?. Endocr. Relat. Cancer 2009, 16:1073-1089.
-
(2009)
Endocr. Relat. Cancer
, vol.16
, pp. 1073-1089
-
-
Welboren, W.J.1
Sweep, F.C.2
Span, P.N.3
Stunnenberg, H.G.4
-
87
-
-
0031972479
-
Serum- and polypeptide growth factor-inducible gene expression in mouse fibroblasts
-
Winkles J.A. Serum- and polypeptide growth factor-inducible gene expression in mouse fibroblasts. Prog. Nucleic. Acid Res. Mol. Biol. 1998, 58:41-78.
-
(1998)
Prog. Nucleic. Acid Res. Mol. Biol.
, vol.58
, pp. 41-78
-
-
Winkles, J.A.1
-
88
-
-
78649955414
-
Multiple roles for the non-coding RNA SRA in regulation of adipogenesis and insulin sensitivity
-
Xu B., Gerin I., Miao H., Vu-Phan D., Johnson C.N., Xu R., Chen X.W., Cawthorn W.P., MacDougald O.A., Koenig R.J. Multiple roles for the non-coding RNA SRA in regulation of adipogenesis and insulin sensitivity. PLoS One 2010, 5:e14199.
-
(2010)
PLoS One
, vol.5
-
-
Xu, B.1
Gerin, I.2
Miao, H.3
Vu-Phan, D.4
Johnson, C.N.5
Xu, R.6
Chen, X.W.7
Cawthorn, W.P.8
MacDougald, O.A.9
Koenig, R.J.10
-
89
-
-
84879422947
-
RNA sequencing of MCF-7 breast cancer cells identifies novel estrogen-responsive genes with functional estrogen receptor-binding sites in the vicinity of their transcription start sites
-
Yamaga R., Ikeda K., Horie-Inoue K., Ouchi Y., Suzuki Y., Inoue S. RNA sequencing of MCF-7 breast cancer cells identifies novel estrogen-responsive genes with functional estrogen receptor-binding sites in the vicinity of their transcription start sites. Horm. Cancer 2013, 10.1007/s12672-013-0140-3.
-
(2013)
Horm. Cancer
-
-
Yamaga, R.1
Ikeda, K.2
Horie-Inoue, K.3
Ouchi, Y.4
Suzuki, Y.5
Inoue, S.6
-
90
-
-
84867291885
-
Long noncoding RNA: its physiological and pathological roles
-
Yan B., Wang Z. Long noncoding RNA: its physiological and pathological roles. DNA Cell Biol. 2012, 31(Suppl 1):S34-S41.
-
(2012)
DNA Cell Biol.
, vol.31
, Issue.1 SUPPL.
-
-
Yan, B.1
Wang, Z.2
|