MPUMA: A computational approach to microbiota analysis by de novo assembly of operational taxonomic units based on protein-coding barcode sequences

Microbiome

Volumn 1, Issue 1, 2013, Pages

  Links, Matthew G ^a,b   Chaban, Bonnie ^b   Hemmingsen, Sean M ^b,c   Muirhead, Kevin ^c   Hill, Janet E ^a  

^a AGRICULTURE AND AGRI FOOD CANADA   (Canada)

^b UNIVERSITY OF SASKATCHEWAN   (Canada)

^c NATIONAL RESEARCH COUNCIL CANADA   (Canada)

Author keywords

60 kDa chaperonin; Assembly; Automated sequence analysis pipeline; Barcode; Cpn60; Microbial profiling; Microbiota; Microbiota analysis; Operational taxonomic unit

Indexed keywords

CHAPERONIN 60;

AMINO ACID SEQUENCE; ARTICLE; COMPUTER MODEL; DNA BARCODING; DNA SEQUENCE; HUMAN; LACTOBACILLUS GASSERI; LACTOBACILLUS JOHNSONII; MICROBIAL COMMUNITY; MICROBIAL PROFILING USING METAGENOMIC ASSEMBLY; MICROBIOME; OPERATIONAL TAXONOMIC UNIT; PRIORITY JOURNAL; PROTEIN ASSEMBLY; TAXONOMIC IDENTIFICATION; VAGINA FLORA;

OTUS;

EID: 84887649686     PISSN: None     EISSN: 20492618     Source Type: Journal    
DOI: 10.1186/2049-2618-1-23     Document Type: Article

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