-
2
-
-
34250634835
-
A Supramolecular Chemistry Basis for Molecular Logic and Computation
-
De Silva, A. P.; Uchiyama, S.; Vance, T. P.; Wannalerse, B. A Supramolecular Chemistry Basis for Molecular Logic and Computation Coord. Chem. Rev. 2007, 251, 1623-1632
-
(2007)
Coord. Chem. Rev.
, vol.251
, pp. 1623-1632
-
-
De Silva, A.P.1
Uchiyama, S.2
Vance, T.P.3
Wannalerse, B.4
-
3
-
-
53549115049
-
Digital Information Processing in Molecular Systems
-
Szacilowski, K. Digital Information Processing in Molecular Systems Chem. Rev. 2008, 108, 3481-3548
-
(2008)
Chem. Rev.
, vol.108
, pp. 3481-3548
-
-
Szacilowski, K.1
-
4
-
-
34547235468
-
Molecules that Make Decisions
-
Credi, A. Molecules that Make Decisions Angew. Chem., Int. Ed. 2007, 46, 5472-5475
-
(2007)
Angew. Chem., Int. Ed.
, vol.46
, pp. 5472-5475
-
-
Credi, A.1
-
5
-
-
34250755396
-
Chemical Approaches to Molecular Logic Elements for Addition and Subtraction
-
Pischel, U. Chemical Approaches to Molecular Logic Elements for Addition and Subtraction Angew. Chem., Int. Ed. 2007, 46, 4026-4040
-
(2007)
Angew. Chem., Int. Ed.
, vol.46
, pp. 4026-4040
-
-
Pischel, U.1
-
6
-
-
77950115841
-
Smart Molecules at Work - Mimicking Advanced Logic Operations
-
Andreasson, J.; Pischel, U. Smart Molecules at Work-Mimicking Advanced Logic Operations Chem. Soc. Rev. 2010, 39, 174-188
-
(2010)
Chem. Soc. Rev.
, vol.39
, pp. 174-188
-
-
Andreasson, J.1
Pischel, U.2
-
8
-
-
33846889540
-
Biotechnology - Logic Goes in Vitro
-
Shapiro, E.; Gil, B. Biotechnology-Logic Goes In Vitro Nat. Nanotechnol. 2007, 2, 84-85
-
(2007)
Nat. Nanotechnol.
, vol.2
, pp. 84-85
-
-
Shapiro, E.1
Gil, B.2
-
9
-
-
67650360431
-
Biocomputers: From Test Tubes to Live Cells
-
Benenson, Y. Biocomputers: From Test Tubes to Live Cells Mol. Biosyst. 2009, 5, 675-685
-
(2009)
Mol. Biosyst.
, vol.5
, pp. 675-685
-
-
Benenson, Y.1
-
10
-
-
4544385006
-
Boolean Logic Functions of a Synthetic Peptide Network
-
Ashkenasy, G.; Ghadiri, M. R. Boolean Logic Functions of a Synthetic Peptide Network J. Am. Chem. Soc. 2004, 126, 11140-11141
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 11140-11141
-
-
Ashkenasy, G.1
Ghadiri, M.R.2
-
11
-
-
84889468351
-
Computing with Nucleic Acids
-
Willner, I. Katz, E. Wiley-VCH: Weinheim, Germany
-
Stojanovic, M. N.; Stefanovic, D.; LaBean, T.; Yan, H. Computing with Nucleic Acids. In Bioelectronics: From Theory to Applications; Willner, I.; Katz, E., Eds.; Wiley-VCH: Weinheim, Germany, 2005; pp 427-455.
-
(2005)
Bioelectronics: From Theory to Applications
, pp. 427-455
-
-
Stojanovic, M.N.1
Stefanovic, D.2
Labean, T.3
Yan, H.4
-
12
-
-
77951588007
-
Enzyme-Based Logic Systems for Information Processing
-
Katz, E.; Privman, V. Enzyme-Based Logic Systems for Information Processing Chem. Soc. Rev. 2010, 39, 1835-1857
-
(2010)
Chem. Soc. Rev.
, vol.39
, pp. 1835-1857
-
-
Katz, E.1
Privman, V.2
-
13
-
-
70350507280
-
-
Springer: Berlin, Germany
-
Unconventional Computation. Lecture Notes in Computer Science; Calude, C. S.; Costa, J. F.; Dershowitz, N.; Freire, E.; Rozenberg, G.,Eds.; Springer: Berlin, Germany, 2009; Vol. 5715.
-
(2009)
Unconventional Computation. Lecture Notes in Computer Science
, vol.5715
-
-
Calude, C.S.1
Costa, J.F.2
Dershowitz, N.3
Freire, E.4
Rozenberg, G.5
-
14
-
-
65249130801
-
-
Luniver Press: Bristol, U.K
-
Unconventional Computing; Adamatzky, A.; De Lacy Costello, B.; Bull, L.; Stepney, S.; Teuscher, C., Eds.; Luniver Press: Bristol, U.K., 2007.
-
(2007)
Unconventional Computing
-
-
Adamatzky, A.1
De Lacy Costello, B.2
Bull, L.3
Stepney, S.4
Teuscher, C.5
-
15
-
-
79958238526
-
Biomolecular Computers
-
de Murieta, I. S.; Miro-Bueno, J. M.; Rodriguez-Paton, A. Biomolecular Computers Curr. Bioinf. 2011, 6, 173-184
-
(2011)
Curr. Bioinf.
, vol.6
, pp. 173-184
-
-
De Murieta, I.S.1
Miro-Bueno, J.M.2
Rodriguez-Paton, A.3
-
16
-
-
77957839129
-
Digital Biosensors with Built-In Logic for Biomedical Applications - Biosensors Based on Biocomputing Concept
-
Wang, J.; Katz, E. Digital Biosensors with Built-In Logic for Biomedical Applications-Biosensors Based on Biocomputing Concept Anal. Bioanal. Chem. 2010, 398, 1591-1603
-
(2010)
Anal. Bioanal. Chem.
, vol.398
, pp. 1591-1603
-
-
Wang, J.1
Katz, E.2
-
17
-
-
79951642270
-
Digital Biosensors with Built-In Logic for Biomedical Applications
-
Wang, J.; Katz, E. Digital Biosensors with Built-In Logic for Biomedical Applications Isr. J. Chem. 2011, 51, 141-150
-
(2011)
Isr. J. Chem.
, vol.51
, pp. 141-150
-
-
Wang, J.1
Katz, E.2
-
18
-
-
84863451993
-
Multianalyte Digital Enzyme Biosensors with Built-In Boolean Logic
-
Katz, E.; Wang, J.; Privman, M.; Halámek, J. Multianalyte Digital Enzyme Biosensors with Built-In Boolean Logic Anal. Chem. 2012, 84, 5463-5469
-
(2012)
Anal. Chem.
, vol.84
, pp. 5463-5469
-
-
Katz, E.1
Wang, J.2
Privman, M.3
Halámek, J.4
-
19
-
-
79951666721
-
Some Experiments and Directions in Molecular Computing and Robotics
-
Stojanovic, M. N. Some Experiments and Directions in Molecular Computing and Robotics Isr. J. Chem. 2011, 51, 99-105
-
(2011)
Isr. J. Chem.
, vol.51
, pp. 99-105
-
-
Stojanovic, M.N.1
-
20
-
-
78149381376
-
Training a Molecular Automaton to Play a Game
-
Pei, R.; Matamoros, E.; Liu, M.; Stefanovic, D.; Stojanovic, M. N. Training a Molecular Automaton to Play a Game Nat. Nanotechnol. 2010, 5, 773-777
-
(2010)
Nat. Nanotechnol.
, vol.5
, pp. 773-777
-
-
Pei, R.1
Matamoros, E.2
Liu, M.3
Stefanovic, D.4
Stojanovic, M.N.5
-
21
-
-
78149398045
-
Biomolecular Computing: Learning Through Play
-
Privman, V. Biomolecular Computing: Learning Through Play Nat. Nanotechnol. 2010, 5, 767-768
-
(2010)
Nat. Nanotechnol.
, vol.5
, pp. 767-768
-
-
Privman, V.1
-
22
-
-
44349118572
-
Towards Molecular Computers that Operate in a Biological Environment
-
Kahan, M.; Gil, B.; Adar, R.; Shapiro, E. Towards Molecular Computers that Operate in a Biological Environment Physica D 2008, 237, 1165-1172
-
(2008)
Physica D
, vol.237
, pp. 1165-1172
-
-
Kahan, M.1
Gil, B.2
Adar, R.3
Shapiro, E.4
-
23
-
-
84874659948
-
A Novel Text and Image Encryption Method Based on Chaos Theory and DNA Computing
-
Babaei, M. A Novel Text and Image Encryption Method Based on Chaos Theory and DNA Computing Nat. Comput. 2013, 12, 101-107
-
(2013)
Nat. Comput.
, vol.12
, pp. 101-107
-
-
Babaei, M.1
-
24
-
-
84870024653
-
Design of Digital Response in Enzyme-Based Bioanalytical Systems for Information Processing Applications
-
Domanskyi, S.; Privman, V. Design of Digital Response in Enzyme-Based Bioanalytical Systems for Information Processing Applications J. Phys. Chem. B 2012, 116, 13690-13695
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 13690-13695
-
-
Domanskyi, S.1
Privman, V.2
-
25
-
-
84877117033
-
Electrode Interfaces Switchable by Physical and Chemical Signals for Biosensing, Biofuel and Biocomputing Applications
-
Katz, E.; Minko, S.; Halámek, J.; MacVittie, K.; Yancey, K. Electrode Interfaces Switchable by Physical and Chemical Signals for Biosensing, Biofuel and Biocomputing Applications Anal. Bioanal. Chem. 2013, 405, 3659-3672
-
(2013)
Anal. Bioanal. Chem.
, vol.405
, pp. 3659-3672
-
-
Katz, E.1
Minko, S.2
Halámek, J.3
Macvittie, K.4
Yancey, K.5
-
26
-
-
84859753174
-
Electronic Interfaces Switchable by Logically Processed Multiple Biochemical and Physiological Signals
-
Katz, E.; Bocharova, V.; Privman, M. Electronic Interfaces Switchable by Logically Processed Multiple Biochemical and Physiological Signals J. Mater. Chem. 2012, 22, 8171-8178
-
(2012)
J. Mater. Chem.
, vol.22
, pp. 8171-8178
-
-
Katz, E.1
Bocharova, V.2
Privman, M.3
-
27
-
-
84857043412
-
Switchable Electrode Interfaces Controlled by Physical, Chemical and Biological Signals
-
Bocharova, V.; Katz, E. Switchable Electrode Interfaces Controlled by Physical, Chemical and Biological Signals Chem. Rec. 2012, 12, 114-130
-
(2012)
Chem. Rec.
, vol.12
, pp. 114-130
-
-
Bocharova, V.1
Katz, E.2
-
28
-
-
79951591630
-
Bioelectronic Devices Controlled by Biocomputing Systems
-
Katz, E. Bioelectronic Devices Controlled by Biocomputing Systems Isr. J. Chem. 2011, 51, 132-140
-
(2011)
Isr. J. Chem.
, vol.51
, pp. 132-140
-
-
Katz, E.1
-
29
-
-
61749099277
-
Switchable Electrode Controlled by Enzyme Logic Network System: Approaching Physiologically Regulated Bioelectronics
-
Privman, M.; Tam, T. K.; Pita, M.; Katz, E. Switchable Electrode Controlled by Enzyme Logic Network System: Approaching Physiologically Regulated Bioelectronics J. Am. Chem. Soc. 2009, 131, 1314-1321
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 1314-1321
-
-
Privman, M.1
Tam, T.K.2
Pita, M.3
Katz, E.4
-
30
-
-
65249092639
-
Coupling of Biocomputing Systems with Electronic Chips: Electronic Interface for Transduction of Biochemical Information
-
Krämer, M.; Pita, M.; Zhou, J.; Ornatska, M.; Poghossian, A.; Schöning, M. J.; Katz, E. Coupling of Biocomputing Systems with Electronic Chips: Electronic Interface for Transduction of Biochemical Information J. Phys. Chem. C 2009, 113, 2573-2579
-
(2009)
J. Phys. Chem. C
, vol.113
, pp. 2573-2579
-
-
Krämer, M.1
Pita, M.2
Zhou, J.3
Ornatska, M.4
Poghossian, A.5
Schöning, M.J.6
Katz, E.7
-
31
-
-
65249170851
-
Network Analysis of Biochemical Logic for Noise Reduction and Stability: A System of Three Coupled Enzymatic and Gates
-
Privman, V.; Arugula, M. A.; Halámek, J.; Pita, M.; Katz, E. Network Analysis of Biochemical Logic for Noise Reduction and Stability: A System of Three Coupled Enzymatic AND Gates J. Phys. Chem. B 2009, 113, 5301-5310
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 5301-5310
-
-
Privman, V.1
Arugula, M.A.2
Halámek, J.3
Pita, M.4
Katz, E.5
-
32
-
-
33751229022
-
Concatenated Logic Gates Using Four Coupled Biocatalysts Operating in Series
-
Niazov, T.; Baron, R.; Katz, E.; Lioubashevski, O.; Willner, I. Concatenated Logic Gates Using Four Coupled Biocatalysts Operating in Series Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 17160-17163
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 17160-17163
-
-
Niazov, T.1
Baron, R.2
Katz, E.3
Lioubashevski, O.4
Willner, I.5
-
33
-
-
33746276942
-
Elementary Arithmetic Operations by Enzymes: A Model for Metabolic Pathway Based Computing
-
Baron, R.; Lioubashevski, O.; Katz, E.; Niazov, T.; Willner, I. Elementary Arithmetic Operations by Enzymes: A Model for Metabolic Pathway Based Computing Angew. Chem., Int. Ed. 2006, 45, 1572-1576
-
(2006)
Angew. Chem., Int. Ed.
, vol.45
, pp. 1572-1576
-
-
Baron, R.1
Lioubashevski, O.2
Katz, E.3
Niazov, T.4
Willner, I.5
-
34
-
-
33746345883
-
Logic Gates and Elementary Computing by Enzymes
-
Baron, R.; Lioubashevski, O.; Katz, E.; Niazov, T.; Willner, I. Logic Gates and Elementary Computing by Enzymes J. Phys. Chem. A 2006, 110, 8548-8553
-
(2006)
J. Phys. Chem. A
, vol.110
, pp. 8548-8553
-
-
Baron, R.1
Lioubashevski, O.2
Katz, E.3
Niazov, T.4
Willner, I.5
-
35
-
-
44649099650
-
Towards de Novo Design of Deoxyribozyme Biosensors for GMO Detection
-
May, E. E.; Dolan, P. L.; Crozier, P. S.; Brozik, S.; Manginell, M. Towards De Novo Design of Deoxyribozyme Biosensors for GMO Detection IEEE Sens. J. 2008, 8, 1011-1019
-
(2008)
IEEE Sens. J.
, vol.8
, pp. 1011-1019
-
-
May, E.E.1
Dolan, P.L.2
Crozier, P.S.3
Brozik, S.4
Manginell, M.5
-
36
-
-
34249036719
-
Nanoparticle Self-Assembly Gated by Logical Proteolytic Triggers
-
von Maltzahn, G.; Harris, T. J.; Park, J.-H.; Min, D.-H.; Schmidt, A. J.; Sailor, M. J.; Bhatia, S. N. Nanoparticle Self-Assembly Gated by Logical Proteolytic Triggers J. Am. Chem. Soc. 2007, 129, 6064-6065
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 6064-6065
-
-
Von Maltzahn, G.1
Harris, T.J.2
Park, J.-H.3
Min, D.-H.4
Schmidt, A.J.5
Sailor, M.J.6
Bhatia, S.N.7
-
37
-
-
79960213497
-
Detection of Multiple Disease Indicators by an Autonomous Biomolecular Computer
-
Gil, B.; Kahan-Hanum, M.; Skirtenko, N.; Adar, R.; Shapiro, E. Detection of Multiple Disease Indicators by an Autonomous Biomolecular Computer Nano Lett. 2011, 11, 2989-2996
-
(2011)
Nano Lett.
, vol.11
, pp. 2989-2996
-
-
Gil, B.1
Kahan-Hanum, M.2
Skirtenko, N.3
Adar, R.4
Shapiro, E.5
-
38
-
-
84860226991
-
Analysis of Biomarkers Characteristic of Porcine Liver Injury - From Biomolecular Logic Gates to Animal Model
-
Halámková, L.; Halámek, J.; Bocharova, V.; Wolf, S.; Mulier, K. E.; Beilman, G.; Wang, J.; Katz, E. Analysis of Biomarkers Characteristic of Porcine Liver Injury-From Biomolecular Logic Gates to Animal Model Analyst 2012, 137, 1768-1770
-
(2012)
Analyst
, vol.137
, pp. 1768-1770
-
-
Halámková, L.1
Halámek, J.2
Bocharova, V.3
Wolf, S.4
Mulier, K.E.5
Beilman, G.6
Wang, J.7
Katz, E.8
-
39
-
-
80051665989
-
Enzyme-Based NAND Gate for Rapid Electrochemical Screening of Traumatic Brain Injury in Serum
-
Zhou, N.; Windmiller, J. R.; Valdés Ramírez, G.; Zhou, M.; Halámek, J.; Katz, E.; Wang, J. Enzyme-Based NAND Gate for Rapid Electrochemical Screening of Traumatic Brain Injury in Serum Anal. Chim. Acta 2011, 703, 94-100
-
(2011)
Anal. Chim. Acta
, vol.703
, pp. 94-100
-
-
Zhou, N.1
Windmiller, J.R.2
Valdés Ramírez, G.3
Zhou, M.4
Halámek, J.5
Katz, E.6
Wang, J.7
-
40
-
-
78650171244
-
Bio-Logic Analysis of Injury Biomarker Patterns in Human Serum Samples
-
Zhou, J.; Halámek, J.; Bocharova, V.; Wang, J.; Katz, E. Bio-Logic Analysis of Injury Biomarker Patterns in Human Serum Samples Talanta 2011, 83, 955-959
-
(2011)
Talanta
, vol.83
, pp. 955-959
-
-
Zhou, J.1
Halámek, J.2
Bocharova, V.3
Wang, J.4
Katz, E.5
-
41
-
-
78149437403
-
Multi-Enzyme Logic Network Architectures for Assessing Injuries: Digital Processing of Biomarkers
-
Halámek, J.; Bocharova, V.; Chinnapareddy, S.; Windmiller, J. R.; Strack, G.; Chuang, M.-C.; Zhou, J.; Santhosh, P.; Ramirez, G. V.; Arugula, M. A. Multi-Enzyme Logic Network Architectures for Assessing Injuries: Digital Processing of Biomarkers Mol. Biosyst. 2010, 6, 2554-2560
-
(2010)
Mol. Biosyst.
, vol.6
, pp. 2554-2560
-
-
Halámek, J.1
Bocharova, V.2
Chinnapareddy, S.3
Windmiller, J.R.4
Strack, G.5
Chuang, M.-C.6
Zhou, J.7
Santhosh, P.8
Ramirez, G.V.9
Arugula, M.A.10
-
42
-
-
33645031060
-
Towards Computing with Proteins
-
Unger, R.; Moult, J. Towards Computing with Proteins Proteins 2006, 63, 53-64
-
(2006)
Proteins
, vol.63
, pp. 53-64
-
-
Unger, R.1
Moult, J.2
-
44
-
-
32644452650
-
DNA Computing: Applications and Challenges
-
Ezziane, Z. DNA Computing: Applications and Challenges Nanotechnology 2006, 17, R27-R39
-
(2006)
Nanotechnology
, vol.17
-
-
Ezziane, Z.1
-
45
-
-
34447310821
-
A Universal RNAi-Based Logic Evaluator that Operates in Mammalian Cells
-
Rinaudo, K.; Bleris, L.; Maddamsetti, R.; Subramanian, S.; Weiss, R.; Benenson, Y. A Universal RNAi-Based Logic Evaluator that Operates in Mammalian Cells Nat. Biotechnol. 2007, 25, 795-801
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 795-801
-
-
Rinaudo, K.1
Bleris, L.2
Maddamsetti, R.3
Subramanian, S.4
Weiss, R.5
Benenson, Y.6
-
46
-
-
78651397316
-
Robust Multicellular Computing Using Genetically Encoded NOR Gates and Chemical 'Wires'
-
Tamsir, A.; Tabor, J. J.; Voigt, C. A. Robust Multicellular Computing Using Genetically Encoded NOR Gates and Chemical 'Wires' Nature 2011, 469, 212-215
-
(2011)
Nature
, vol.469
, pp. 212-215
-
-
Tamsir, A.1
Tabor, J.J.2
Voigt, C.A.3
-
47
-
-
79952820393
-
Bacteria-Based and Logic Gate: A Decision-Making and Self-Powered Biosensor
-
Li, Z.; Rosenbaum, M. A.; Venkataraman, A.; Tam, T. K.; Katz, E.; Angenent, L. T. Bacteria-Based AND Logic Gate: A Decision-Making and Self-Powered Biosensor Chem. Commun. 2011, 47, 3060-3062
-
(2011)
Chem. Commun.
, vol.47
, pp. 3060-3062
-
-
Li, Z.1
Rosenbaum, M.A.2
Venkataraman, A.3
Tam, T.K.4
Katz, E.5
Angenent, L.T.6
-
48
-
-
84866639069
-
Molecular and Logic Gate Based on Bacterial Anaerobic Respiration
-
Arugula, M. A.; Shroff, N.; Katz, E.; He, Z. Molecular AND Logic Gate Based on Bacterial Anaerobic Respiration Chem. Commun. 2012, 48, 10174-10176
-
(2012)
Chem. Commun.
, vol.48
, pp. 10174-10176
-
-
Arugula, M.A.1
Shroff, N.2
Katz, E.3
He, Z.4
-
49
-
-
53049092595
-
Optimization of Enzymatic Biochemical Logic for Noise Reduction and Scalability: How Many Biocomputing Gates Can Be Interconnected in a Circuit?
-
Privman, V.; Strack, G.; Solenov, D.; Pita, M.; Katz, E. Optimization of Enzymatic Biochemical Logic for Noise Reduction and Scalability: How Many Biocomputing Gates Can Be Interconnected in a Circuit? J. Phys. Chem. B 2008, 112, 11777-11784
-
(2008)
J. Phys. Chem. B
, vol.112
, pp. 11777-11784
-
-
Privman, V.1
Strack, G.2
Solenov, D.3
Pita, M.4
Katz, E.5
-
50
-
-
67651208552
-
Analog Noise Reduction in Enzymatic Logic Gates
-
Melnikov, D.; Strack, G.; Pita, M.; Privman, V.; Katz, E. Analog Noise Reduction in Enzymatic Logic Gates J. Phys. Chem. B 2009, 113, 10472-10479
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 10472-10479
-
-
Melnikov, D.1
Strack, G.2
Pita, M.3
Privman, V.4
Katz, E.5
-
51
-
-
84859939810
-
Enzyme-Based Logic Analysis of Biomarkers at Physiological Concentrations: And Gate with Double-Sigmoid "filter" Response
-
Halámek, J.; Zavalov, O.; Halámková, L.; Korkmaz, S.; Privman, V.; Katz, E. Enzyme-Based Logic Analysis of Biomarkers at Physiological Concentrations: AND Gate with Double-Sigmoid "Filter" Response J. Phys. Chem. B 2012, 116, 4457-4464
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 4457-4464
-
-
Halámek, J.1
Zavalov, O.2
Halámková, L.3
Korkmaz, S.4
Privman, V.5
Katz, E.6
-
52
-
-
84865127257
-
Enzyme-Based Logic: Or Gate with Double-Sigmoid Filter Response
-
Zavalov, O.; Bocharova, V.; Privman, V.; Katz, E. Enzyme-Based Logic: OR Gate with Double-Sigmoid Filter Response J. Phys. Chem. B 2012, 116, 9683-9689
-
(2012)
J. Phys. Chem. B
, vol.116
, pp. 9683-9689
-
-
Zavalov, O.1
Bocharova, V.2
Privman, V.3
Katz, E.4
-
53
-
-
84876018810
-
Two-Input Enzymatic Logic Gates Made Sigmoid by Modifications of the Biocatalytic Reaction Cascades
-
Zavalov, O.; Bocharova, V.; Halámek, J.; Halámková, L.; Korkmaz, S.; Arugula, M. A.; Chinnapareddy, S.; Katz, E.; Privman, V. Two-Input Enzymatic Logic Gates Made Sigmoid by Modifications of the Biocatalytic Reaction Cascades Int. J. Unconv. Comput. 2012, 8, 347-365
-
(2012)
Int. J. Unconv. Comput.
, vol.8
, pp. 347-365
-
-
Zavalov, O.1
Bocharova, V.2
Halámek, J.3
Halámková, L.4
Korkmaz, S.5
Arugula, M.A.6
Chinnapareddy, S.7
Katz, E.8
Privman, V.9
-
54
-
-
79951871570
-
Towards Biochemical Filter with Sigmoidal Response to pH Changes: Buffered Biocatalytic Signal Transduction
-
Pita, M.; Privman, V.; Arugula, M. A.; Melnikov, D.; Bocharova, V.; Katz, E. Towards Biochemical Filter with Sigmoidal Response to pH Changes: Buffered Biocatalytic Signal Transduction Phys. Chem. Chem. Phys. 2011, 13, 4507-4513
-
(2011)
Phys. Chem. Chem. Phys.
, vol.13
, pp. 4507-4513
-
-
Pita, M.1
Privman, V.2
Arugula, M.A.3
Melnikov, D.4
Bocharova, V.5
Katz, E.6
-
55
-
-
78149278930
-
Biochemical Filter with Sigmoidal Response: Increasing the Complexity of Biomolecular Logic
-
Privman, V.; Halámek, J.; Arugula, M. A.; Melnikov, D.; Bocharova, V.; Katz, E. Biochemical Filter with Sigmoidal Response: Increasing the Complexity of Biomolecular Logic J. Phys. Chem. B 2010, 114, 14103-14109
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 14103-14109
-
-
Privman, V.1
Halámek, J.2
Arugula, M.A.3
Melnikov, D.4
Bocharova, V.5
Katz, E.6
-
56
-
-
84879581724
-
Enzymatic and Logic Gate with Sigmoid Response Induced by Photochemically Controlled Oxidation of the Output
-
Privman, V.; Fratto, B. E.; Zavalov, O.; Halámek, J.; Katz, E. Enzymatic AND Logic Gate with Sigmoid Response Induced by Photochemically Controlled Oxidation of the Output J. Phys. Chem. B 2013, 117, 7559-7568
-
(2013)
J. Phys. Chem. B
, vol.117
, pp. 7559-7568
-
-
Privman, V.1
Fratto, B.E.2
Zavalov, O.3
Halámek, J.4
Katz, E.5
-
57
-
-
84855941304
-
Employing the Metabolic "branch Point Effect" to Generate an All-or-None, Digital-Like Response in Enzymatic Outputs and Enzyme-Based Sensors
-
Rafael, S. P.; Vallée-Bélisle, A.; Fabregas, E.; Plaxco, K.; Palleschi, G.; Ricci, F. Employing the Metabolic "Branch Point Effect" to Generate an All-or-None, Digital-Like Response in Enzymatic Outputs and Enzyme-Based Sensors Anal. Chem. 2012, 84, 1076-1082
-
(2012)
Anal. Chem.
, vol.84
, pp. 1076-1082
-
-
Rafael, S.P.1
Vallée-Bélisle, A.2
Fabregas, E.3
Plaxco, K.4
Palleschi, G.5
Ricci, F.6
-
58
-
-
84856834769
-
Engineering Biosensors with Extended, Narrowed, or Arbitrarily Edited Dynamic Range
-
Vallée-Bélisle, A.; Ricci, F.; Plaxco, K. W. Engineering Biosensors with Extended, Narrowed, or Arbitrarily Edited Dynamic Range J. Am. Chem. Soc. 2012, 134, 2876-2879
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 2876-2879
-
-
Vallée-Bélisle, A.1
Ricci, F.2
Plaxco, K.W.3
-
59
-
-
84863219385
-
Re-engineering Electrochemical Biosensors to Narrow or Extend Their Useful Dynamic Range
-
Kang, D.; Vallée-Bélisle, A.; Plaxco, K. W.; Ricci, F. Re-engineering Electrochemical Biosensors to Narrow or Extend Their Useful Dynamic Range Angew. Chem., Int. Ed. 2012, 51, 6717-6721
-
(2012)
Angew. Chem., Int. Ed.
, vol.51
, pp. 6717-6721
-
-
Kang, D.1
Vallée-Bélisle, A.2
Plaxco, K.W.3
Ricci, F.4
-
60
-
-
80055106927
-
High-Precision, in Vitro Validation of the Sequestration Mechanism for Generating Ultrasensitive Dose-Response Curves in Regulatory Networks
-
e1002171
-
Ricci, F.; Vallée-Bélisle, A.; Plaxco, K. W. High-Precision, In Vitro Validation of the Sequestration Mechanism for Generating Ultrasensitive Dose-Response Curves in Regulatory Networks PLoS Comput. Biol. 2011, 7 e1002171
-
(2011)
PLoS Comput. Biol.
, vol.7
-
-
Ricci, F.1
Vallée-Bélisle, A.2
Plaxco, K.W.3
-
61
-
-
70350393277
-
Enzymatic AND-Gate Based on Electrode-Immobilized Glucose-6-phosphate Dehydrogenase: Towards Digital Biosensors and Biochemical Logic Systems with Low Noise
-
Privman, V.; Pedrosa, V.; Melnikov, D.; Pita, M.; Simonian, A.; Katz, E. Enzymatic AND-Gate Based on Electrode-Immobilized Glucose-6-phosphate Dehydrogenase: Towards Digital Biosensors and Biochemical Logic Systems with Low Noise Biosens. Bioelectron. 2009, 25, 695-701
-
(2009)
Biosens. Bioelectron.
, vol.25
, pp. 695-701
-
-
Privman, V.1
Pedrosa, V.2
Melnikov, D.3
Pita, M.4
Simonian, A.5
Katz, E.6
-
62
-
-
79951758037
-
Enzymatic Logic Gates with Noise-Reducing Sigmoid Response
-
Pedrosa, V.; Melnikov, D.; Pita, M.; Halámek, J.; Privman, V.; Simonian, A.; Katz, E. Enzymatic Logic Gates with Noise-Reducing Sigmoid Response Int. J. Unconv. Comput. 2010, 6, 451-460
-
(2010)
Int. J. Unconv. Comput.
, vol.6
, pp. 451-460
-
-
Pedrosa, V.1
Melnikov, D.2
Pita, M.3
Halámek, J.4
Privman, V.5
Simonian, A.6
Katz, E.7
-
63
-
-
65249133487
-
Fluctuating Enzyme and Its Biological Functions: Positive Cooperativity without Multiple States
-
Qian, H.; Shi, P.-Z. Fluctuating Enzyme and Its Biological Functions: Positive Cooperativity without Multiple States J. Phys. Chem. B 2009, 113, 2225-2230
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 2225-2230
-
-
Qian, H.1
Shi, P.-Z.2
-
64
-
-
44349141904
-
Dissecting Enzyme Regulation by Multiple Allosteric Effectors: Nucleotide Regulation of Aspartate Transcarbamoylase
-
Rabinowitz, J. D.; Hsiao, J. J.; Gryncel, K. R.; Kantrowitz, E. R.; Feng, X.-J. Dissecting Enzyme Regulation by Multiple Allosteric Effectors: Nucleotide Regulation of Aspartate Transcarbamoylase Biochemistry 2008, 47, 5881-5888
-
(2008)
Biochemistry
, vol.47
, pp. 5881-5888
-
-
Rabinowitz, J.D.1
Hsiao, J.J.2
Gryncel, K.R.3
Kantrowitz, E.R.4
Feng, X.-J.5
-
65
-
-
0037199968
-
Hierarchical Organization of Modularity in Metabolic Networks
-
Ravasz, E.; Somera, A. L.; Mongru, D. A.; Oltvai, Z. N.; Barabasi, A. L. Hierarchical Organization of Modularity in Metabolic Networks Science 2002, 297, 1551-1555
-
(2002)
Science
, vol.297
, pp. 1551-1555
-
-
Ravasz, E.1
Somera, A.L.2
Mongru, D.A.3
Oltvai, Z.N.4
Barabasi, A.L.5
-
66
-
-
81355154070
-
Identification of Biochemical Network Modules Based on Shortest Retroactive Distances
-
e1002262
-
Sridharan, G. V.; Hassoun, S.; Lee, K. Identification of Biochemical Network Modules Based on Shortest Retroactive Distances PLoS Comput. Biol. 2011, 7 e1002262
-
(2011)
PLoS Comput. Biol.
, vol.7
-
-
Sridharan, G.V.1
Hassoun, S.2
Lee, K.3
-
67
-
-
84879052409
-
The Evolutionary Origins of Modularity
-
20122863
-
Clune, J.; Mouret, J.-B.; Lipson, H. The Evolutionary Origins of Modularity Proc. R. Soc. London, Ser. B 2013, 280 20122863
-
(2013)
Proc. R. Soc. London, Ser. B
, vol.280
-
-
Clune, J.1
Mouret, J.-B.2
Lipson, H.3
-
68
-
-
84856913023
-
Error-Control and Digitalization Concepts for Chemical and Biomolecular Information Processing Systems
-
Privman, V. Error-Control and Digitalization Concepts for Chemical and Biomolecular Information Processing Systems J. Comput. Theor. Nanosci. 2011, 8, 490-502
-
(2011)
J. Comput. Theor. Nanosci.
, vol.8
, pp. 490-502
-
-
Privman, V.1
-
69
-
-
0002154654
-
Horseradish Peroxidase: Structure and Kinetic Properties
-
Everse, J. Everse, K. E. Grisham, M. B. CRC Press: Boca Raton, FL
-
Dunford, H. B. Horseradish Peroxidase: Structure and Kinetic Properties. In Peroxidases in Chemistry and Biology; Everse, J.; Everse, K. E.; Grisham, M. B., Eds.; CRC Press: Boca Raton, FL, 1991; Vol. 2, pp 1-24.
-
(1991)
Peroxidases in Chemistry and Biology
, vol.2
, pp. 1-24
-
-
Dunford, H.B.1
-
72
-
-
0020478887
-
The Horseradish Peroxidase-Catalyzed Oxidation of 3,5,3′,5′- Tetramethylbenzidine. Free Radical and Charge-Transfer Complex Intermediates
-
Josephy, P. D.; Eling, T.; Mason, R. P. The Horseradish Peroxidase-Catalyzed Oxidation of 3,5,3′,5′-Tetramethylbenzidine. Free Radical and Charge-Transfer Complex Intermediates J. Biol. Chem. 1982, 257, 3669-3675
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 3669-3675
-
-
Josephy, P.D.1
Eling, T.2
Mason, R.P.3
-
73
-
-
0030796009
-
Mechanism of the Oxidation of 3,5,3′,5′-Tetramethylbenzidine by Myeloperoxidase Determined by Transient- and Steady-State Kinetics
-
Marquez, L. A.; Dunford, H. B. Mechanism of the Oxidation of 3,5,3′,5′-Tetramethylbenzidine by Myeloperoxidase Determined by Transient- and Steady-State Kinetics Biochemistry 1997, 36, 9349-9355
-
(1997)
Biochemistry
, vol.36
, pp. 9349-9355
-
-
Marquez, L.A.1
Dunford, H.B.2
-
74
-
-
74349087313
-
Optimization of Enzymatic Logic Gates and Networks for Noise Reduction and Stability
-
Kent, K. B. Dini, P. Franza, O. Palacios, T. Reig, C. Maranon, J. E. Rostami, A. Zammit-Mangion, D. Hasenplaugh, W. C. Toran, F. Zafar, Y. IEEE Computer Society Conference Publishing Services: Los Alamitos, CA
-
Arugula, M. A.; Halámek, J.; Katz, E.; Melnikov, D.; Pita, M.; Privman, V.; Strack, G. Optimization of Enzymatic Logic Gates and Networks for Noise Reduction and Stability. In Proc. Conf. CENICS 2009; Kent, K. B.; Dini, P.; Franza, O.; Palacios, T.; Reig, C.; Maranon, J. E.; Rostami, A.; Zammit-Mangion, D.; Hasenplaugh, W. C.; Toran, F.; Zafar, Y., Eds.; IEEE Computer Society Conference Publishing Services: Los Alamitos, CA, 2009; pp 1-7.
-
(2009)
Proc. Conf. CENICS 2009
, pp. 1-7
-
-
Arugula, M.A.1
Halámek, J.2
Katz, E.3
Melnikov, D.4
Pita, M.5
Privman, V.6
Strack, G.7
|