Erratum: Chromogenic chemical probe for protein structural characterization via ultraviolet photodissociation mass spectrometry (Analytical Chemistry (2013) 85:15 (7391-7397) DOI: 10.1021/ac401305f);Chromogenic chemical probe for protein structural characterization via ultraviolet photodissociation mass spectrometry

Analytical Chemistry

Volumn 85, Issue 15, 2013, Pages 7391-7397

  O'Brien, John P ^a   Pruet, Jeff M ^a   Brodbelt, Jennifer S ^a  

^a UNIVERSITY OF TEXAS AT AUSTIN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; CHROMOPHORES; MASS SPECTROMETRY; PHOTODISSOCIATION; PROBES;

BETA-LACTOGLOBULIN; COMPLEX MIXTURE; MASS SPECTROMETRY STRATEGIES; PROTEIN COMPLEXES; RELATIVE REACTIVITIES; STRUCTURAL CHARACTERIZATION; TRYPTIC DIGESTS; ULTRAVIOLET PHOTODISSOCIATION;

PEPTIDES;

EID: 84881327265     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac4034328     Document Type: Erratum

References (72)

1. Mendoza, V. L.; Vachet, R. W. Mass Spectrom. Rev. 2009, 28, 785-815
2. Fitzgerald, M. C.; West, G. M. J. Am. Soc. Mass Spectrom. 2009, 20, 1193-1206
3. Back, J. W.; de Jong, L.; Muijsers, A. O.; de Koster, C. G. J. Mol. Biol. 2003, 331, 303-313
4. Leitner, A.; Walzthoeni, T.; Kahraman, A.; Herzog, F.; Rinner, O.; Beck, M.; Aebersold, R. Mol. Cell Proteomics 2010, 9, 1634-1649
5. Petrotchenko, E. V.; Borchers, C. H. Mass Spectrom. Rev. 2010, 29, 862-876
6. Sinz, A. Anal. Bioanal. Chem. 2010, 397, 3433-3440
7. Rappsilber, J. J. Struct. Biol. 2011, 173, 530-540
8. Chen, J.; Rempel, D. L.; Gau, B. C.; Gross, M. L. J. Am. Chem. Soc. 2012, 134, 18724-18731
9. Pan, Y.; Konermann, L. The Analyst 2010, 135, 1191
10. Wang, L.; Chance, M. R. Anal. Chem. 2011, 83, 7234-7241
11. Zheng, X.; Wintrode, P. L.; Chance, M. R. Structure 2008, 16, 38-51
12. Takamoto, K.; Chance, M. R. Annu. Rev. Biophys. Biomol. Struct. 2006, 35, 251-276
13. Hambly, D. M.; Gross, M. L. J. Am. Soc. Mass Spectrom. 2005, 16, 2057-2063
14. Khanal, A.; Pan, Y.; Brown, L. S.; Konermann, L. J. Mass Spectrom. 2012, 47, 1620-1626
15. Vahidi, S.; Stocks, B. B.; Liaghati-Mobarhan, Y.; Konermann, L. Anal. Chem. 2012, 84, 9124-9130
16. Pan, Y.; Piyadasa, H.; O'Neil, J. D.; Konermann, L. J. Mol. Biol. 2012, 416, 400-413
17. Frantom, P. A.; Zhang, H.-M.; Emmett, M. R.; Marshall, A. G.; Blanchard, J. S. Biochemistry 2009, 48, 7457-7464
18. Katta, V.; Chait, B. T.; Carr, S. Rapid Commun. Mass Spectrom. 2005, 5, 214-217
19. Rozbesky, D.; Man, P.; Kavan, D.; Chmelik, J.; Cerny, J.; Bezouska, K.; Novak, P. Anal. Chem. 2012, 84, 867-870
20. Kaltashov, I. A.; Bobst, C. E.; Abzalimov, R. R. Anal. Chem. 2009, 81, 7892-7899
21. Valeja, S.; Emmett, M.; Marshall, A. J. Am. Soc. Mass Spectrom. 2012, 23, 699-707
22. Zhang, Z.; Smith, D. L. Protein Sci. 2008, 2, 522-531
23. Liu, Z.; Julian, R. R. J. Am. Soc. Mass Spectrom. 2009, 20, 965-971
24. Diedrich, J. K.; Julian, R. R. Anal. Chem. 2010, 82, 4006-4014
25. Tao, Y.; Julian, R. R. Biochemistry 2012, 51, 1796-1802
26. Vasicek, L.; O'Brien, J. P.; Browning, K. S.; Tao, Z.; Liu, H.-W.; Brodbelt, J. S. Mol. Cell. Proteomics 2012, 11, O111.015826-O111.015826
27. Mendoza, V. L.; Barón-Rodríguez, M. A.; Blanco, C.; Vachet, R. W. Biochemistry 2011, 50, 6711-6722
28. Zhou, Y.; Vachet, R. W. J. Am. Soc. Mass Spectrom. 2012, 23, 899-907
29. Zhou, Y.; Vachet, R. J. Am. Soc. Mass Spectrom. 2012, 23, 708-717
30. Janecki, D. J.; Beardsley, R. L.; Reilly, J. P. Anal. Chem. 2005, 77, 7274-7281
31. Jaffee, E. G.; Lauber, M. A.; Running, W. E.; Reilly, J. P. Anal. Chem. 2012, 84, 9355-9361
32. Lauber, M. A.; Reilly, J. P. Anal. Chem. 2010, 82, 7736-7743
33. Lauber, M. A.; Reilly, J. P. J. Proteome Res. 2011, 10, 3604-3616
34. Lu, Y.; Tanasova, M.; Borhan, B.; Reid, G. E. Anal. Chem. 2008, 80, 9279-9287
35. Reid, G. E.; Roberts, K. D.; Simpson, R. J.; O'Hair, R. A. J. J. Am. Soc. Mass Spectrom. 2005, 16, 1131-1150
36. Roberts, K. D.; Reid, G. E. J. Mass Spectrom. 2007, 42, 187-198
37. Zhou, X.; Lu, Y.; Wang, W.; Borhan, B.; Reid, G. J. Am. Soc. Mass Spectrom. 2010, 21, 1339-1351
38. Liu, F.; Goshe, M. B. Anal. Chem. 2010, 82, 6215-6223
39. Petrotchenko, E. V.; Serpa, J. J.; Borchers, C. H. Mol. Cell. Proteomics 2011, 10.
40. Gabant, G.; Augier, J.; Armengaud, J. J. Mass Spectrom. 2008, 43, 360-370
41. Müller, M. Q.; Zeiser, J. J.; Dreiocker, F.; Pich, A.; Schäfer, M.; Sinz, A. Rapid Commun. Mass Spectrom. 2011, 25, 155-161
42. Dreiocker, F.; Müller, M. Q.; Sinz, A.; Schäfer, M. J. Mass Spectrom. 2010, 45, 178-189
43. He, Y.; Lauber, M. A.; Reilly, J. P. J. Am. Soc. Mass Spectrom. 2012, 23, 1046-1052
44. Müller, M. Q.; Dreiocker, F.; Ihling, C. H.; Schäfer, M.; Sinz, A. Anal. Chem. 2010, 82, 6958-6968
45. Clifford-Nunn, B.; Showalter, H. D. H.; Andrews, P. C. J. Am. Soc. Mass Spectrom. 2012, 23, 201-212
46. Liu, F.; Wu, C.; Sweedler, J. V.; Goshe, M. B. Proteomics 2012, 12, 401-405
47. Kao, A.; Chiu, C.-L.; Vellucci, D.; Yang, Y.; Patel, V. R.; Guan, S.; Randall, A.; Baldi, P.; Rychnovsky, S. D.; Huang, L. Mol. Cell. Proteomics 2011, 10.
48. Calabrese, A. N.; Wang, T.; Bowie, J. H.; Pukala, T. L. Rapid Commun. Mass Spectrom. 2013, 27, 238-248
49. Calabrese, A. N.; Good, N. J.; Wang, T.; He, J.; Bowie, J. H.; Pukala, T. L. J. Am. Soc. Mass Spectrom. 2012, 23, 1364-1375
50. Tang, X.; Munske, G. R.; Siems, W. F.; Bruce, J. E. Anal. Chem. 2005, 77, 311-318
51. Back, J. W.; Hartog, A. F.; Dekker, H. L.; Muijsers, A. O.; Koning, L. J.; Jong, L. J. Am. Soc. Mass Spectrom. 2001, 12, 222-227
52. Petrotchenko, E. V.; Olkhovik, V. K.; Borchers, C. H. Mol. Cell. Proteomics 2005, 4, 1167-1179
53. Petrotchenko, E. V.; Xiao, K.; Cable, J.; Chen, Y.; Dokholyan, N. V.; Borchers, C. H. Mol. Cell. Proteomics 2009, 8, 273-286
54. Yang, L.; Tang, X.; Weisbrod, C. R.; Munske, G. R.; Eng, J. K.; von Haller, P. D.; Kaiser, N. K.; Bruce, J. E. Anal. Chem. 2010, 82, 3556-3566
55. Gardner, M. W.; Brodbelt, J. S. Anal. Chem. 2010, 82, 5751-5759
56. Gardner, M. W.; Vasicek, L. A.; Shabbir, S.; Anslyn, E. V.; Brodbelt, J. S. Anal. Chem. 2008, 80, 4807-4819
57. Gardner, M. W.; Brodbelt, J. S. Anal. Chem. 2009, 81, 4864-4872
58. Xu, H.; Freitas, M. A. BMC Bioinf. 2007, 8, 133
59. Xu, H.; Zhang, L.; Freitas, M. A. J. Proteome Res. 2008, 7, 138-144
60. Xu, H.; Freitas, M. A. Bioinformatics 2009, 25, 1341-1343
61. Fraczkiewicz, R.; Braun, W. J. Comput. Chem. 1998, 19, 319-333
62. Olsson, M. H. M.; Søndergaard, C. R.; Rostkowski, M.; Jensen, J. H. J. Chem. Theory Comput. 2011, 7, 525-537
63. Suckau, D.; Mak, M.; Przybylski, M. Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 5630-5634
64. Schnaible, V.; Przybylski, M. Bioconjugate Chem. 1999, 10, 861-866
65. Smales, C. M.; Moore, C. H.; Blackwell, L. F. Bioconjugate Chem. 1999, 10, 693-700
66. Callewaert, L.; Michiels, C. W. J. Biosciences 2010, 35, 127-160
67. Perkins, S. J.; Johnson, L. N.; Phillips, D. C.; Dwek, R. A. Biochem. J. 1981, 193, 553-572
68. Blake, C. C. F.; Johnson, L. N.; Mair, G. A.; North, A. C. T.; Phillips, D. C.; Sarma, V. R. Proc. R. Soc. B 1967, 167, 378-388
69. Sharon, N. Proc. R. Soc. London, Ser. B 1967, 167, 402-415
70. Kontopidis, G.; Holt, C.; Sawyer, L. J. Mol. Biol. 2002, 318, 1043-1055
71. Loch, J. I.; Polit, A.; Bonarek, P.; Olszewska, D.; Kurpiewska, K.; Dziedzicka-Wasylewska, M.; Lewiński, K. Int. J. Biol. Macromol. 2012, 50, 1095-1102
72. Qin, B. Y.; Bewley, M. C.; Creamer, L. K.; Baker, H. M.; Baker, E. N.; Jameson, G. B. Biochemistry 1998, 37, 14014-14023