-
1
-
-
33644761306
-
Hydrogen exchange mass spectrometry for the analysis of protein dynamics
-
Wales, T.E., Engen, J.R.: Hydrogen exchange mass spectrometry for the analysis of protein dynamics. Mass Spectrom. Rev. 25, 158-170 (2006)
-
(2006)
Mass Spectrom. Rev.
, vol.25
, pp. 158-170
-
-
Wales, T.E.1
Engen, J.R.2
-
2
-
-
33750320427
-
Hydrogen exchange and mass spectrometry: A historical perspective
-
DOI 10.1016/j.jasms.2006.06.006, PII S1044030506005514
-
Englander, S.W.: Hydrogen exchange and mass spectrometry: A historical perspective. J. Am. Soc. Mass Spectrom. 17, 1481-1489 (2006) (Pubitemid 44635273)
-
(2006)
Journal of the American Society for Mass Spectrometry
, vol.17
, Issue.11
, pp. 1481-1489
-
-
Englander, S.W.1
-
3
-
-
35448956141
-
Hydrogen/deuterium exchange-mass spectrometry: A powerful tool for probing protein structure, dynamics and interactions
-
DOI 10.2174/092986707781745596
-
Tsutsui, Y., Wintrode, P.L.: Hydrogen/deuterium exchange-mass spectrometry: A powerful tool for probing protein structure, dynamics and interactions. Curr. Med. Chem. 14, 2344-2358 (2007) (Pubitemid 47618043)
-
(2007)
Current Medicinal Chemistry
, vol.14
, Issue.22
, pp. 2344-2358
-
-
Tsutsui, Y.1
Wintrode, P.L.2
-
4
-
-
70349613463
-
Analysis of protein conformation and dynamics by hydrogen/deuterium exchange MS
-
Engen, J.R.: Analysis of protein conformation and dynamics by hydrogen/deuterium exchange MS. Anal. Chem. 81, 7870-7875 (2009)
-
(2009)
Anal. Chem.
, vol.81
, pp. 7870-7875
-
-
Engen, J.R.1
-
5
-
-
77953480345
-
Hydrogen exchange mass spectrometry: What is it and what can it tell us?
-
Marcsisin, S.R., Engen, J.R.: Hydrogen exchange mass spectrometry: What is it and what can it tell us? Analyt. Bioanalyt. Chem. 397, 967-972 (2010)
-
(2010)
Analyt. Bioanalyt. Chem.
, vol.397
, pp. 967-972
-
-
Marcsisin, S.R.1
Engen, J.R.2
-
6
-
-
79960003359
-
Conformer-specific hydrogen exchange analysis of Aβ(1-42) oligomers by top-down electron capture dissociation mass spectrometry
-
Pan, J., Han, J., Borchers, C.H., Konermann, L.: Conformer-specific hydrogen exchange analysis of Aβ(1-42) oligomers by top-down electron capture dissociation mass spectrometry. Anal. Chem. 83, 5386-5393 (2011)
-
(2011)
Anal. Chem.
, vol.83
, pp. 5386-5393
-
-
Pan, J.1
Han, J.2
Borchers, C.H.3
Konermann, L.4
-
7
-
-
0036882288
-
Analysis of protein-nucleic acid interactions by photochemical cross-linking and mass spectrometry
-
Steen, H., Jensen, O.N.: Analysis of protein-nucleic acid interactions by photochemical cross-linking and mass spectrometry. Mass Spectrom. Rev. 21, 163-182 (2002)
-
(2002)
Mass Spectrom. Rev.
, vol.21
, pp. 163-182
-
-
Steen, H.1
Jensen, O.N.2
-
8
-
-
33745742438
-
Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions
-
DOI 10.1002/mas.20082
-
Sinz, A.: Chemical cross-linking and mass spectrometry to map threedimensional protein structures and protein-protein interactions. Mass Spectrom. Rev. 25, 663-682 (2006) (Pubitemid 44014105)
-
(2006)
Mass Spectrometry Reviews
, vol.25
, Issue.4
, pp. 663-682
-
-
Sinz, A.1
-
9
-
-
33646809337
-
Three dimensional structures of proteins and protein complexes from chemical cross-linking and mass spectrometry: A biochemical and computational overview
-
DOI 10.1016/j.ijrobp.2006.04.020
-
Chakravarti, B., Lewis, S.J., Chakravarti, D.N., Raval, A.: Three dimensional structures of proteins and protein complexes from chemical cross-linking and mass spectrometry: A biochemical and computational overview. Curr. Proteom. 3, 1-21 (2006) (Pubitemid 43764651)
-
(2006)
Current Proteomics
, vol.3
, Issue.1
, pp. 1-21
-
-
Chakravarti, B.1
Lewis, S.J.2
Chakravarti, D.N.3
Raval, A.4
-
10
-
-
78149438179
-
Crosslinking combined with mass spectrometry for structural proteomics
-
Petrotchenko, E.V., Borchers, C.H.: Crosslinking combined with mass spectrometry for structural proteomics. Mass Spectrom. Rev. 29, 862-876 (2010)
-
(2010)
Mass Spectrom. Rev.
, vol.29
, pp. 862-876
-
-
Petrotchenko, E.V.1
Borchers, C.H.2
-
11
-
-
77956058146
-
Investigation of protein-protein interactions in living cells by chemical crosslinking and mass spectrometry
-
Sinz, A.: Investigation of protein-protein interactions in living cells by chemical crosslinking and mass spectrometry. Analyt. Bioanalyt. Chem. 397, 3433-3440 (2010)
-
(2010)
Analyt. Bioanalyt. Chem.
, vol.397
, pp. 3433-3440
-
-
Sinz, A.1
-
12
-
-
77955381399
-
Probing native protein structures by chemical cross-linking, mass spectrometry and bioinformatics
-
Leitner, A., Walzthoeni, T., Kahraman, A., Herzog, F., Rinner, O., Beck, M., Aebersold, R.: Probing native protein structures by chemical cross-linking, mass spectrometry and bioinformatics. Mol. Cell. Proteom. 9, 1634-1649 (2010)
-
(2010)
Mol. Cell. Proteom.
, vol.9
, pp. 1634-1649
-
-
Leitner, A.1
Walzthoeni, T.2
Kahraman, A.3
Herzog, F.4
Rinner, O.5
Beck, M.6
Aebersold, R.7
-
13
-
-
77950415030
-
Chemical cross-linking and mass spectrometry as a low-resolution protein structure determination technique
-
Singh, P., Panchaud, A., Goodlett, D.R.: Chemical cross-linking and mass spectrometry as a low-resolution protein structure determination technique. Anal. Chem. 82, 2636-2642 (2010)
-
(2010)
Anal. Chem.
, vol.82
, pp. 2636-2642
-
-
Singh, P.1
Panchaud, A.2
Goodlett, D.R.3
-
14
-
-
34548337296
-
Hydroxyl radical-mediated modification of proteins as probes for structural proteomics
-
DOI 10.1021/cr0682047
-
Xu, G., Chance, M.R.: Hydroxyl radical-mediated modification of proteins as probes for structural proteomics. Chem. Rev. 107, 3514-3543 (2007) (Pubitemid 47333548)
-
(2007)
Chemical Reviews
, vol.107
, Issue.8
, pp. 3514-3543
-
-
Xu, G.1
Chance, M.R.2
-
15
-
-
78650717220
-
Future directions of structural mass spectrometry using hydroxyl radical footprinting
-
Kiselar, J.G., Chance, M.R.: Future directions of structural mass spectrometry using hydroxyl radical footprinting. J. Mass Spectrom. 45, 1373-1382 (2010)
-
(2010)
J. Mass Spectrom.
, vol.45
, pp. 1373-1382
-
-
Kiselar, J.G.1
Chance, M.R.2
-
16
-
-
84862833364
-
Structural mass spectrometry of proteins using hydroxyl radical based protein footprinting
-
Wang, L.-W., Chance, M.R.: Structural mass spectrometry of proteins using hydroxyl radical based protein footprinting. Anal. Chem. 83, 7234-7241 (2011)
-
(2011)
Anal. Chem.
, vol.83
, pp. 7234-7241
-
-
Wang, L.-W.1
Chance, M.R.2
-
17
-
-
27844593258
-
Laser flash photolysis of hydrogen peroxide to oxidize protein solvent-accessible residues on the microsecond timescale
-
DOI 10.1016/j.jasms.2005.09.008, PII S1044030505008159
-
Hambly, D.M., Gross, M.L.: Laser flash photolysis of hydrogen peroxide to oxidize protein solvent-accessible residues on the microsecond timescale. J. Am. Soc. Mass Spectrom. 16, 2057-2063 (2005) (Pubitemid 41642969)
-
(2005)
Journal of the American Society for Mass Spectrometry
, vol.16
, Issue.12
, pp. 2057-2063
-
-
Hambly, D.M.1
Gross, M.L.2
-
18
-
-
33750632747
-
Laser flash photochemical oxidation to locate Heme binding and conformational changes in myoglobin
-
Hambly, D.M., Gross, M.L.: Laser flash photochemical oxidation to locate Heme binding and conformational changes in myoglobin. Int. J. Mass Spectrom. 259, 124-129 (2007)
-
(2007)
Int J. Mass Spectrom.
, vol.259
, pp. 124-129
-
-
Hambly, D.M.1
Gross, M.L.2
-
19
-
-
68849107091
-
Fast photochemical oxidation of protein footprints faster than protein unfolding
-
Gau, B.C., Sharp, J.S., Rempel, D.L., Gross, M.L.: Fast photochemical oxidation of protein footprints faster than protein unfolding. Anal. Chem. 81, 6563-6571 (2009)
-
(2009)
Anal. Chem.
, vol.81
, pp. 6563-6571
-
-
Gau, B.C.1
Sharp, J.S.2
Rempel, D.L.3
Gross, M.L.4
-
20
-
-
78149244661
-
T-jump and fast photochemical oxidation probe sun millisecond protein folding
-
Chen, J., Rempel, D.L., Gross, M.L.: T-jump and fast photochemical oxidation probe sun millisecond protein folding. J. Am. Chem. Soc. 132, 15502-15504 (2010)
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 15502-15504
-
-
Chen, J.1
Rempel, D.L.2
Gross, M.L.3
-
21
-
-
69849100869
-
Probing protein structure by amino acidspecific covalent labeling and mass spectrometry
-
Mendoza, V.L., Vachet, R.W.: Probing protein structure by amino acidspecific covalent labeling and mass spectrometry. Mass Spectrom. Rev. 28, 785-815 (2009)
-
(2009)
Mass Spectrom. Rev.
, vol.28
, pp. 785-815
-
-
Mendoza, V.L.1
Vachet, R.W.2
-
22
-
-
42349091083
-
Protein surface mapping using diethylpyrocarbonate with mass spectrometric detection
-
DOI 10.1021/ac701999b
-
Mendoza, V.L., Vachet, R.W.: Protein surface mapping using diethylpyrocarbonate with mass spectrometric detection. Anal. Chem. 80, 2895-2904 (2008) (Pubitemid 351556454)
-
(2008)
Analytical Chemistry
, vol.80
, Issue.8
, pp. 2895-2904
-
-
Mendoza, V.L.1
Vachet, R.W.2
-
23
-
-
77955671120
-
Mass spectrometry combined with oxidative labeling for exploring protein structure and folding
-
Konermann, L., Stocks, B.B., Pan, Y., Tong, X.: Mass spectrometry combined with oxidative labeling for exploring protein structure and folding. Mass Spectrom. Rev. 29, 651-667 (2010)
-
(2010)
Mass Spectrom. Rev.
, vol.29
, pp. 651-667
-
-
Konermann, L.1
Stocks, B.B.2
Pan, Y.3
Tong, X.4
-
24
-
-
43949144960
-
Exploring the mechanism of selective noncovalent adduct protein probing mass spectrometry utilizing site-directed mutagenesis to examine ubiquitin
-
DOI 10.1021/ac800176u
-
Liu, Z.J., Cheng, S.J., Gailie, D.R., Julian, R.R.: Exploring the mechanism of selective noncovalent adduct protein probing mass spectrometry utilizing site-directed mutagenesis to examine ubiquitin. Anal. Chem. 80, 3846-3852 (2008) (Pubitemid 351705891)
-
(2008)
Analytical Chemistry
, vol.80
, Issue.10
, pp. 3846-3852
-
-
Liu, Z.1
Cheng, S.2
Gallie, D.R.3
Julian, R.R.4
-
25
-
-
55149085458
-
Protein-metal interactions of calmodulin and a-Synuclein monitored by selective noncovalent adduct protein probing mass spectrometry
-
Ly, T., Julian, R.R.: Protein-metal interactions of calmodulin and a-Synuclein monitored by selective noncovalent adduct protein probing mass spectrometry. J. Am. Soc. Mass Spectrom. 19, 1663-1672 (2008)
-
(2008)
J. Am. Soc. Mass Spectrom.
, vol.19
, pp. 1663-1672
-
-
Ly, T.1
Julian, R.R.2
-
26
-
-
33747882757
-
Using ESI-MS to Probe Protein Structure by Site-Specific Noncovalent Attachment of 18-Crown-6
-
DOI 10.1016/j.jasms.2006.05.007, PII S1044030506004843
-
Ly, T., Julian, R.R.: Using ESI-MS to probe protein structure by sitespecific noncovalent attachment of 18-Crown-6. J. Am. Soc. Mass Spectrom. 17, 1209-1215 (2006) (Pubitemid 44292006)
-
(2006)
Journal of the American Society for Mass Spectrometry
, vol.17
, Issue.9
, pp. 1209-1215
-
-
Ly, T.1
Julian, R.R.2
-
28
-
-
0026327663
-
N-acylation of aplysia egg-laying hormone with biotin
-
Knock, S.L., Miller, B.T., Blankenship, J.E., Nagle, G.T., Smith, J.S., Kurosky, A.: N-acylation of aplysia egg-laying hormone with biotin. J. Biol. Chem. 266, 24413-24419 (1991)
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 24413-24419
-
-
Knock, S.L.1
Miller, B.T.2
Blankenship, J.E.3
Nagle, G.T.4
Smith, J.S.5
Kurosky, A.6
-
29
-
-
0028183497
-
Molecular characterization of surface topology in protein tertiary structures by amino-acylation and mass spectrometric peptide mapping
-
Glocker, M.O., Borchers, C., Fiedler, W., Suckau, D., Przybylski, M.: Molecular characterization of surface topology in protein tertiary structures by amino-acylation and mass spectrometric peptide mapping. Bioconj. Chem. 5, 583-590 (1994)
-
(1994)
Bioconj. Chem.
, vol.5
, pp. 583-590
-
-
Glocker, M.O.1
Borchers, C.2
Fiedler, W.3
Suckau, D.4
Przybylski, M.5
-
30
-
-
0030458684
-
Selective biochemical modification of functional residues in recombinant human macrophage colony-stimulating factor β (rhM-CSF β): Identification by mass spectrometry
-
Glocker, M.O., Kalkum, M., Yamamoto, R., Schreurs, J.: Selective biochemical modification of functional residues in recombinant human macrophage colony-stimulating factor β (rhM-CSF β): Identification by mass spectrometry. Biochemistry 35, 14625-14633 (1996)
-
(1996)
Biochemistry
, vol.35
, pp. 14625-14633
-
-
Glocker, M.O.1
Kalkum, M.2
Yamamoto, R.3
Schreurs, J.4
-
31
-
-
0032521065
-
1-acid glycoprotein by high-performance liquid chromatography electrospray ionization-mass spectrometry and matrix-assisted laser desorption/ionization time-of-flight-mass spectrometry
-
DOI 10.1006/abio.1997.2552
-
Dage, J.L., Sun, H., Halsall, H.B.: Determination of diethylpyrocarbonate-modified amino acid residues in a1-acid glycoprotein by high performance liquid chromatography electrospray ionization-mass spectrometry and matrix-assisted laser desorption/ionization time-of-flightmass spectrometry. Analyt. Biochem. 257, 176-185 (1998) (Pubitemid 28128980)
-
(1998)
Analytical Biochemistry
, vol.257
, Issue.2
, pp. 176-185
-
-
Dage, J.L.1
Sun, H.2
Halsall, H.B.3
-
32
-
-
0032031804
-
Structure characterization of functional histidine residues and carbethoxylated derivatives in peptides and proteins by mass spectrometry
-
DOI 10.1021/bc970162t
-
Kalkum, M., Przybylski, M., Glocker, M.O.: Structure characterization of functional histidine residues and carbethoxylated derivatives in peptides and proteins by mass spectrometry. Bioconj. Chem. 9, 226-235 (1998) (Pubitemid 28147140)
-
(1998)
Bioconjugate Chemistry
, vol.9
, Issue.2
, pp. 226-235
-
-
Kalkum, M.1
Przybylski, M.2
Glocker, M.O.3
-
33
-
-
0034724254
-
561 from ascorbate but does not influence electron donation to monodehydroascorbate radical: Identification of the modification sites by mass spectrometric analysis
-
DOI 10.1021/bi991883d
-
Tsubaki, M., Kobayashi, K., Ichise, T., Takeuchi, F., Tagawa, S.: Diethyl pyrocarbonate modification abolishes fast electron accepting ability of cytochrome b561 from ascorbate but does not influence electron donation to monodehydroascorbate radical: Identification of the modification sites by mass spectrometric analysis. Biochemistry 39, 3276-3284 (2000) (Pubitemid 30169996)
-
(2000)
Biochemistry
, vol.39
, Issue.12
, pp. 3276-3284
-
-
Tsubaki, M.1
Kobayashi, K.2
Ichise, T.3
Takeuchi, F.4
Tagawa, S.5
-
34
-
-
0242507462
-
Histidine-834 of Human Erythrocyte Band 3 Has an Essential Role in the Conformational Changes That Occur during the Band 3-Mediated Anion Exchange
-
DOI 10.1021/bi0350809
-
Jin, X.R., Abe, Y., Li, C.Y., Hamasaki, N.: Histidine-834 of human erythrocyte band 3 has an essential role in the conformational changes that occur during the band 3-mediated anion exchange. Biochemistry 42, 12927-12932 (2003) (Pubitemid 37385824)
-
(2003)
Biochemistry
, vol.42
, Issue.44
, pp. 12927-12932
-
-
Jin, X.R.1
Abe, Y.2
Li, C.Y.3
Hamasaki, N.4
-
35
-
-
0037127206
-
Mapping Cu(II) binding sites in prion proteins by diethyl pyrocarbonate modification and matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometric footprinting
-
DOI 10.1074/jbc.M108744200
-
Qin, K., Yang, Y., Mastrangelo, P., Westaway, D.: Mapping Cu(II) binding sites in prion proteins by diethyl pyrocarbonate modification and matrix-assisted laser desorption ionization-time of flight (MALDITOF) mass spectrometric footprinting. J. Biol. Chem. 277, 1981-1990 (2002) (Pubitemid 34968778)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.3
, pp. 1981-1990
-
-
Qin, K.1
Yang, Y.2
Mastrangelo, P.3
Westaway, D.4
-
36
-
-
77449095000
-
Structure of the preamyloid dimer of β-2-Microglobulin fromcovalent labeling and mass spectrometry
-
Mendoza, V.L., Antwi, K., Baron-Rodriguez, M.A., Blanco, C., Vachet, R.W.: Structure of the preamyloid dimer of β-2-Microglobulin fromcovalent labeling and mass spectrometry. Biochemistry 49, 1522-1532 (2010)
-
(2010)
Biochemistry
, vol.49
, pp. 1522-1532
-
-
Mendoza, V.L.1
Antwi, K.2
Baron-Rodriguez, M.A.3
Blanco, C.4
Vachet, R.W.5
-
37
-
-
0001528720
-
Exact and efficient analytical calculation of the accessible surface areas and their gradients for macromolecules
-
Fraczkiewicz, R., Braun, W.: Exact and efficient analytical calculation of the accessible surface areas and their gradients for macromolecules. J. Comput. Chem. 19, 319-333 (1998) (Pubitemid 128592649)
-
(1998)
Journal of Computational Chemistry
, vol.19
, Issue.3
, pp. 319-333
-
-
Fraczkiewicz, R.1
Braun, W.2
-
38
-
-
18244378561
-
The solution structure of human β2-microglobulin reveals the prodromes of its amyloid transition
-
DOI 10.1110/ps.29002
-
Verdone, G., Corazza, A., Viglino, P., Pettirossi, F., Giorgetti, S., Mangione, P., Andreola, A., Stoppini, M., Bellotti, V., Esposito, G.: The solution structure of human β2-microglobulin reveals the prodromes of its amyloid transition. Protein Sci. 11, 487-499 (2002) (Pubitemid 34171254)
-
(2002)
Protein Science
, vol.11
, Issue.3
, pp. 487-499
-
-
Verdone, G.1
Corazza, A.2
Viglino, P.3
Pettirossi, F.4
Giorgetti, S.5
Mangione, P.6
Andreola, A.7
Stoppini, M.8
Bellotti, V.9
Esposito, G.10
-
39
-
-
70350045274
-
Copper binding to β-2-microglobulin and its pre-amyloid oligomers
-
Srikanth, R., Mendoza, V.L., Bridgewater, J.D., Zhang, G., Vachet, R. W.: Copper Binding to β-2-Microglobulin and Its Pre-Amyloid Oligomers. Biochemistry 48, 9871-9881 (2009)
-
(2009)
Biochemistry
, vol.48
, pp. 9871-9881
-
-
Srikanth, R.1
Mendoza, V.L.2
Bridgewater, J.D.3
Zhang, G.4
Vachet, R.W.5
-
40
-
-
79961041262
-
Structural insights into the Pre-Amyloid tetramer of β-2- Microglobulin from covalent labeling and mass spectrometry
-
Mendoza, V.L., Baron-Rodriguez, M.A., Blanco, C., Vachet, R.W.: Structural insights into the Pre-Amyloid tetramer of β-2-Microglobulin from covalent labeling and mass spectrometry. Biochemistry 50, 6711-6722 (2011)
-
(2011)
Biochemistry
, vol.50
, pp. 6711-6722
-
-
Mendoza, V.L.1
Baron-Rodriguez, M.A.2
Blanco, C.3
Vachet, R.W.4
-
41
-
-
0004192250
-
-
9th edn. John Wiley and Sons, New York
-
Solomons, T.W.G., Fryhle, C.: Organic Chemistry, 9th edn. John Wiley and Sons, New York, 854 (1998)
-
(1998)
Organic Chemistry
, vol.854
-
-
Solomons, T.W.G.1
Fryhle, C.2
|