-
1
-
-
0036966861
-
The role of conjugative transposons in spreading antibiotic resistance between bacteria that inhabit the gastrointestinal tract
-
PMID:12568333
-
Scott K P. The role of conjugative transposons in spreading antibiotic resistance between bacteria that inhabit the gastrointestinal tract. Cell Mol Life Sci 2002; 59:2071-2082; PMID:12568333; http://dx.doi. org/10.1007/s000180200007.
-
(2002)
Cell Mol Life Sci
, vol.59
, pp. 2071-2082
-
-
Scott, K.P.1
-
2
-
-
32944466887
-
Ecological and evolutionary forces shaping microbial diversity in the human intestine
-
PMID:16497592
-
Ley RE, Peterson DA, Gordon JI. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 2006; 124:837-848; PMID:16497592; http://dx.doi.org/10.1016/j.cell.2006.02.017.
-
(2006)
Cell
, vol.124
, pp. 837-848
-
-
Ley, R.E.1
Peterson, D.A.2
Gordon, J.I.3
-
3
-
-
4444382949
-
Human intestinal bacteria as reservoirs for antibiotic resistance genes
-
PMID:15337162
-
Salyers AA, Gupta A, Wang Y. Human intestinal bacteria as reservoirs for antibiotic resistance genes. Trends Microbiol 2004; 12:412-416; PMID:15337162; http:// dx.doi.org/10.1016/j.tim.2004.07.004.
-
(2004)
Trends Microbiol
, vol.12
, pp. 412-416
-
-
Salyers, A.A.1
Gupta, A.2
Wang, Y.3
-
4
-
-
79251559429
-
The human gut mobile metagenome: A metazoan perspective
-
PMID:21468227
-
Jones BV. The human gut mobile metagenome: a metazoan perspective. Gut Microbes 2010; 1:415-4131; PMID:21468227; http://dx.doi.org/10.4161/gmic.1.6.14087.
-
(2010)
Gut Microbes
, vol.1
, pp. 415-4131
-
-
Jones, B.V.1
-
5
-
-
80052445616
-
Assessment of bacterial antibiotic resistance transfer in the gut
-
PMID:21318188
-
Schjørring S, Krogfelt KA. Assessment of bacterial antibiotic resistance transfer in the gut. Int J Microbiol 2011; 2011:312956; PMID:21318188; http://dx.doi. org/10.1155/2011/312956.
-
(2011)
Int J Microbiol
, pp. 312956
-
-
Schjørring, S.1
Krogfelt, K.A.2
-
6
-
-
79959677612
-
The gut as reservoir of antibiotic resistance: Microbial diversity of tetracycline resistance in mother and infant
-
PMID:21738748
-
de Vries LE, Vallès Y, Agersø Y, Vaishampayan PA, García-Montaner A, Kuehl JV, et al. The gut as reservoir of antibiotic resistance: microbial diversity of tetracycline resistance in mother and infant. PLoS One 2011; 6:e21644; PMID:21738748; http://dx.doi. org/10.1371/journal.pone.0021644.
-
(2011)
PLoS One
, vol.e21644
, pp. 6
-
-
de Vries, L.E.1
Vallès, Y.2
Agersø, Y.3
Vaishampayan, P.A.4
García-Montaner, A.5
Kuehl, J.V.6
-
7
-
-
33845959386
-
Transposon-aided capture (TRACA) of plasmids resident in the human gut mobile metagenome
-
PMID:17128268
-
Jones BV, Marchesi JR. Transposon-aided capture (TRACA) of plasmids resident in the human gut mobile metagenome. Nat Methods 2007; 4:55-61; PMID:17128268; http://dx.doi.org/10.1038/nmeth964.
-
(2007)
Nat Methods
, vol.4
, pp. 55-61
-
-
Jones, B.V.1
Marchesi, J.R.2
-
8
-
-
33745594044
-
The gut flora as a forgotten organ
-
PMID:16819463
-
OHara AM, Shanahan F. The gut flora as a forgotten organ. EMBO Rep 2006; 7:688-93; PMID:16819463; http://dx.doi.org/10.1038/sj.embor.7400731.
-
(2006)
EMBO Rep
, vol.7
, pp. 688-693
-
-
Ohara, A.M.1
Shanahan, F.2
-
9
-
-
73449106108
-
The give-and-take of DNA: Horizontal gene transfer in plants
-
PMID:19910236
-
Bock R. The give-and-take of DNA: horizontal gene transfer in plants. Trends Plant Sci 2010; 15:11-22; PMID:19910236; http://dx.doi.org/10.1016/j. tplants.2009.10.001.
-
(2010)
Trends Plant Sci
, vol.15
, pp. 11-22
-
-
Bock, R.1
-
10
-
-
77950959077
-
Impact of transposable elements on the organization and function of allopolyploid genomes
-
PMID:20002321
-
Parisod C, Alix K, Just J, Petit M, Sarilar V, Mhiri C, et al. Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol 2010; 186:37-45; PMID:20002321; http://dx.doi. org/10.1111/j.1469-8137.2009.03096.x.
-
(2010)
New Phytol
, vol.186
, pp. 37-45
-
-
Parisod, C.1
Alix, K.2
Just, J.3
Petit, M.4
Sarilar, V.5
Mhiri, C.6
-
11
-
-
2942709486
-
Evolution of cell-cell signaling in animals: Did late horizontal gene transfer from bacteria have a role?
-
PMID:15219393
-
Iyer LM, Aravind L, Coon SL, Klein DC, Koonin E V. Evolution of cell-cell signaling in animals: did late horizontal gene transfer from bacteria have a role? Trends Genet 2004; 20:292-9; PMID:15219393; http://dx.doi.org/10.1016/j.tig.2004.05.007.
-
(2004)
Trends Genet
, vol.20
, pp. 292-299
-
-
Iyer, L.M.1
Aravind, L.2
Coon, S.L.3
Klein, D.C.4
Koonin, E.V.5
-
12
-
-
84866181273
-
The impact of transposable elements on eukaryotic genomes: From genome size increase to genetic adaptation to stressful environments
-
PMID:22921893
-
Chénais B, Caruso A, Hiard S, Casse N. The impact of transposable elements on eukaryotic genomes: from genome size increase to genetic adaptation to stressful environments. Gene 2012; 509:7-15; PMID:22921893; http://dx.doi.org/10.1016/j. gene.2012.07.042.
-
(2012)
Gene
, vol.509
, pp. 7-15
-
-
Chénais, B.1
Caruso, A.2
Hiard, S.3
Casse, N.4
-
13
-
-
0035843993
-
Commensal host-bacterial relationships in the gut
-
PMID:11352068
-
Hooper LV, Gordon JI. Commensal host-bacterial relationships in the gut. Science 2001; 292:1115-8; PMID:11352068; http://dx.doi.org/10.1126/sci-ence.1058709.
-
(2001)
Science
, vol.292
, pp. 1115-1118
-
-
Hooper, L.V.1
Gordon, J.I.2
-
14
-
-
84871868990
-
Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants
-
PMID:22934241
-
Arias MC, Danchin EG, Coutinho P, Henrissat B, Ball S. Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants. Mob Genet Elements 2012; 2:81-7; PMID:22934241; http://dx.doi.org/10.4161/mge.20375.
-
(2012)
Mob Genet Elements
, vol.2
, pp. 81-87
-
-
Arias, M.C.1
Danchin, E.G.2
Coutinho, P.3
Henrissat, B.4
Ball, S.5
-
15
-
-
77950847866
-
Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut micro-biota
-
PMID:20376150
-
Hehemann JH, Correc G, Barbeyron T, Helbert W, Czjzek M, Michel G. Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut micro-biota. Nature 2010; 464:908-12; PMID:20376150; http://dx.doi.org/10.1038/nature08937.
-
(2010)
Nature
, vol.464
, pp. 908-912
-
-
Hehemann, J.H.1
Correc, G.2
Barbeyron, T.3
Helbert, W.4
Czjzek, M.5
Michel, G.6
-
16
-
-
75549086985
-
ACLAME: A CLAssification of Mobile genetic Elements, update 2010
-
PMID:19933762, Database issue
-
Leplae R, Lima-Mendez G, Toussaint A. ACLAME: a CLAssification of Mobile genetic Elements, update 2010. Nucleic Acids Res 2010; 38(Database issue):57-61; PMID:19933762; http://dx.doi. org/10.1093/nar/gkp938.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 57-61
-
-
Leplae, R.1
Lima-Mendez, G.2
Toussaint, A.3
-
17
-
-
0033854944
-
Paradigms of plasmid organization
-
PMID:10931342
-
Thomas CM. Paradigms of plasmid organization. Mol Microbiol 2000; 37:485-491; PMID:10931342; http://dx.doi.org/10.1046/j.1365-2958.2000.02006.x.
-
(2000)
Mol Microbiol
, vol.37
, pp. 485-491
-
-
Thomas, C.M.1
-
18
-
-
0022414518
-
Variable phenotypes of Providencia stuartii due to plasmid-encoded traits
-
PMID:4056008
-
Mobley HLT, Chippendale GR, Fraiman MH, Tenney JH, Warren J W. Variable phenotypes of Providencia stuartii due to plasmid-encoded traits. J Clin Microbiol 1985; 22:851-853; PMID:4056008.
-
(1985)
J Clin Microbiol
, vol.22
, pp. 851-853
-
-
Mobley, H.L.T.1
Chippendale, G.R.2
Fraiman, M.H.3
Tenney, J.H.4
Warren, J.W.5
-
19
-
-
0034114730
-
Characterization of plasmid-borne and chromosome-encoded traits of Agrobacterium biovar 1, 2, and 3 strains from France
-
PMID:10788345
-
Ridé M, Ridé S, Petit A, Bollet C, Dessaux Y, Gardan L. Characterization of plasmid-borne and chromosome-encoded traits of Agrobacterium biovar 1, 2, and 3 strains from France. Appl Environ Microbiol 2000; 66:1818-1825; PMID:10788345; http://dx.doi. org/10.1128/AEM.66.5.1818-1825.2000.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 1818-1825
-
-
Ridé, M.1
Ridé, S.2
Petit, A.3
Bollet, C.4
Dessaux, Y.5
Gardan, L.6
-
20
-
-
0000986446
-
Rhizobium plasmids in bacteria-legume interactions
-
Garcia-de los Santos A, Brom S, Romero D. Rhizobium plasmids in bacteria-legume interactions. World J Microbiol Biotechnol 1996; 12:119-125; http://dx.doi. org/10.1007/BF00364676.
-
(1996)
World J Microbiol Biotechnol
, vol.12
, pp. 119-125
-
-
Brom, S.1
Romero, D.2
-
21
-
-
33646232504
-
Multireplicon genome architecture of Lactobacillus salivarius
-
PMID:16617113
-
Claesson MJ, Li Y, Leahy S, Canchaya C, van Pijkeren J P, Cerdeño-Tárraga AM, et al. Multireplicon genome architecture of Lactobacillus salivarius. Proc Natl Acad Sci U S A 2006; 103:6718-23; PMID:16617113; http://dx.doi.org/10.1073/pnas.0511060103.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 6718-6723
-
-
Claesson, M.J.1
Li, Y.2
Leahy, S.3
Canchaya, C.4
van Pijkeren, J.P.5
Cerdeño-Tárraga, A.M.6
-
22
-
-
33845952434
-
Enteroaggregative Escherichia coli: Epidemiology, virulence and detection
-
PMID:17172509
-
Weintraub A. Enteroaggregative Escherichia coli: epidemiology, virulence and detection. J Med Microbiol 2007; 56:4-8; PMID:17172509; http://dx.doi. org/10.1099/jmm.0.46930-0.
-
(2007)
J Med Microbiol
, vol.56
, pp. 4-8
-
-
Weintraub, A.1
-
23
-
-
59149104994
-
Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult
-
PMID:18931093
-
Oshima K, Toh H, Ogura Y, Sasamoto H, Morita H, Park SH, et al. Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult. DNA Res 2008; 15:375-86; PMID:18931093; http://dx.doi.org/10.1093/dnares/dsn026.
-
(2008)
DNA Res
, vol.15
, pp. 375-386
-
-
Oshima, K.1
Toh, H.2
Ogura, Y.3
Sasamoto, H.4
Morita, H.5
Park, S.H.6
-
24
-
-
84856374839
-
Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae
-
PMID:22232693
-
Stecher B, Denzler R, Maier L, Bernet F, Sanders MJ, Pickard DJ, et al. Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae. Proc Natl Acad Sci U S A 2012; 109:1269-74; PMID:22232693; http://dx.doi. org/10.1073/pnas.1113246109.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 1269-1274
-
-
Stecher, B.1
Denzler, R.2
Maier, L.3
Bernet, F.4
Sanders, M.J.5
Pickard, D.J.6
-
25
-
-
40349089738
-
Plasmid encoded antibiotic resistance: Acquisition and transfer of antibiotic resistance genes in bacteria
-
PMID:18193080
-
Bennett PM. Plasmid encoded antibiotic resistance: acquisition and transfer of antibiotic resistance genes in bacteria. Br J Pharmacol 2008; 153(Suppl 1):S347-57; PMID:18193080; http://dx.doi.org/10.1038/ sj.bjp.0707607.
-
(2008)
Br J Pharmacol
, vol.153
, Issue.SUPPL. 1
, pp. 347-357
-
-
Bennett, P.M.1
-
26
-
-
77949727233
-
Antimicrobial resistance, class 1 integrons, and genom-ic island 1 in Salmonella isolates from Vietnam
-
PMID:20195474
-
Vo AT, van Duijkeren E, Gaastra W, Fluit AC. Antimicrobial resistance, class 1 integrons, and genom-ic island 1 in Salmonella isolates from Vietnam. PLoS One 2010; 5:e9440; PMID:20195474; http://dx.doi. org/10.1371/journal.pone.0009440.
-
(2010)
PLoS One
, vol.e9440
, pp. 5
-
-
Vo, A.T.1
van Duijkeren, E.2
Gaastra, W.3
Fluit, A.C.4
-
27
-
-
84869403068
-
Complete genome sequence of Acinetobacter baumannii MDR-TJ and insights into its mechanism of antibiotic resistance
-
PMID:22952140
-
Huang H, Yang ZL, Wu XM, Wang Y, Liu YJ, Luo H, et al. Complete genome sequence of Acinetobacter baumannii MDR-TJ and insights into its mechanism of antibiotic resistance. J Antimicrob Chemother 2012; 67:2825-32; PMID:22952140; http://dx.doi. org/10.1093/jac/dks327.
-
(2012)
J Antimicrob Chemother
, vol.67
, pp. 2825-2832
-
-
Huang, H.1
Yang, Z.L.2
Wu, X.M.3
Wang, Y.4
Liu, Y.J.5
Luo, H.6
-
28
-
-
78649463875
-
New Delhi metallo-β-lactamase in Klebsiella pneumoniae and Escherichia coli, Canada
-
PMID:21192866
-
Mulvey MR, Grant JM, Plewes K, Roscoe D, Boyd DA. New Delhi metallo-β-lactamase in Klebsiella pneumoniae and Escherichia coli, Canada. Emerg Infect Dis 2011; 17:103-6; PMID:21192866; http:// dx.doi.org/10.3201/eid1701.101358.
-
(2011)
Emerg Infect Dis
, vol.17
, pp. 103-106
-
-
Mulvey, M.R.1
Grant, J.M.2
Plewes, K.3
Roscoe, D.4
Boyd, D.A.5
-
29
-
-
84869049412
-
Outbreak of carbapenem-resistant enterobacteriaceae containing blaNDM-1, Ontario, Canada
-
PMID:22997214
-
Borgia S, Lastovetska O, Richardson D, Eshaghi A, Xiong J, Chung C, et al. Outbreak of carbapenem-resistant enterobacteriaceae containing blaNDM-1, Ontario, Canada. Clin Infect Dis 2012; 55:e109-17; PMID:22997214; http://dx.doi.org/10.1093/cid/ cis737.
-
(2012)
Clin Infect Dis
, vol.55
, pp. 109-117
-
-
Borgia, S.1
Lastovetska, O.2
Richardson, D.3
Eshaghi, A.4
Xiong, J.5
Chung, C.6
-
30
-
-
28444471613
-
Antibiotic resistance in food lactic acid bacteria--a review
-
PMID:16289406
-
Mathur S, Singh R. Antibiotic resistance in food lactic acid bacteria--a review. Int J Food Microbiol 2005; 105:281-95; PMID:16289406; http://dx.doi. org/10.1016/j.ijfoodmicro.2005.03.008.
-
(2005)
Int J Food Microbiol
, vol.105
, pp. 281-295
-
-
Mathur, S.1
Singh, R.2
-
31
-
-
0028889420
-
Conjugative transposons: An unusual and diverse set of integrated gene transfer elements
-
PMID:8531886
-
Salyers AA, Shoemaker NB, Stevens AM, Li LY. Conjugative transposons: an unusual and diverse set of integrated gene transfer elements. Microbiol Rev 1995; 59:579-90; PMID:8531886.
-
(1995)
Microbiol Rev
, vol.59
, pp. 579-590
-
-
Salyers, A.A.1
Shoemaker, N.B.2
Stevens, A.M.3
Li, L.Y.4
-
32
-
-
0036439064
-
Conjugative transposons: The tip of the iceberg
-
PMID:12410819
-
Burrus V, Pavlovic G, Decaris B, Guédon G. Conjugative transposons: the tip of the iceberg. Mol Microbiol 2002; 46:601-10; PMID:12410819; http:// dx.doi.org/10.1046/j.1365-2958.2002.03191.x.
-
(2002)
Mol Microbiol
, vol.46
, pp. 601-610
-
-
Burrus, V.1
Pavlovic, G.2
Decaris, B.3
Guédon, G.4
-
33
-
-
38449088143
-
Comparative metagenomics revealed commonly enriched gene sets in human gut microbi-omes
-
PMID:17916580
-
Kurokawa K, Itoh T, Kuwahara T, Oshima K, Toh H, Toyoda A, et al. Comparative metagenomics revealed commonly enriched gene sets in human gut microbi-omes. DNA Res 2007; 14:169-81; PMID:17916580; http://dx.doi.org/10.1093/dnares/dsm018.
-
(2007)
DNA Res
, vol.14
, pp. 169-181
-
-
Kurokawa, K.1
Itoh, T.2
Kuwahara, T.3
Oshima, K.4
Toh, H.5
Toyoda, A.6
-
34
-
-
80051832374
-
Genetic organisation, mobility and predicted functions of genes on integrated, mobile genetic elements in sequenced strains of Clostridium difficile
-
PMID:21876735
-
Brouwer MS, Warburton PJ, Roberts A P, Mullany P, Allan E. Genetic organisation, mobility and predicted functions of genes on integrated, mobile genetic elements in sequenced strains of Clostridium difficile. PLoS One 2011; 6:e23014; PMID:21876735; http:// dx.doi.org/10.1371/journal.pone.0023014.
-
(2011)
PLoS One
, vol.e23014
, pp. 6
-
-
Brouwer, M.S.1
Warburton, P.J.2
Roberts, A.P.3
Mullany, P.4
Allan, E.5
-
35
-
-
84861220095
-
In silico analysis of sequenced strains of Clostridium difficile reveals a related set of conjugative transposons carrying a variety of accessory genes
-
PMID:22754747
-
Brouwer MS, Roberts A P, Mullany P, Allan E. In silico analysis of sequenced strains of Clostridium difficile reveals a related set of conjugative transposons carrying a variety of accessory genes. Mob Genet Elements 2012; 2:8-12; PMID:22754747; http:// dx.doi.org/10.4161/mge.19297.
-
(2012)
Mob Genet Elements
, vol.2
, pp. 8-12
-
-
Brouwer, M.S.1
Roberts, A.P.2
Mullany, P.3
Allan, E.4
-
36
-
-
44849140662
-
The Sorcerer II Global Ocean Sampling Expedition: Metagenomic characterization of viruses within aquatic microbial samples
-
PMID:18213365
-
Williamson SJ, Rusch DB, Yooseph S, Halpern AL, Heidelberg KB, Glass JI, et al. The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples. PLoS One 2008; 3:e1456; PMID:18213365; http:// dx.doi.org/10.1371/journal.pone.0001456.
-
(2008)
PLoS One
, vol.e1456
, pp. 3
-
-
Williamson, S.J.1
Rusch, D.B.2
Yooseph, S.3
Halpern, A.L.4
Heidelberg, K.B.5
Glass, J.I.6
-
37
-
-
77950251400
-
MetaHIT Consortium. A human gut microbial gene catalogue established by metagenomic sequencing
-
PMID:20203603
-
Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, et al.; MetaHIT Consortium. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 2010; 464:59-65; PMID:20203603; http://dx.doi.org/10.1038/ nature08821.
-
(2010)
Nature
, vol.464
, pp. 59-65
-
-
Qin, J.1
Li, R.2
Raes, J.3
Arumugam, M.4
Burgdorf, K.S.5
Manichanh, C.6
-
38
-
-
77955400127
-
Gut microbiota: Metagenom-ics to study complex ecology
-
PMID:20619812
-
Vacharaksa A, Finlay BB. Gut microbiota: metagenom-ics to study complex ecology. Curr Biol 2010; 20:R569-71; PMID:20619812; http://dx.doi.org/10.1016/j. cub.2010.05.020.
-
(2010)
Curr Biol
, vol.20
, pp. 569-571
-
-
Vacharaksa, A.1
Finlay, B.B.2
-
39
-
-
34547455844
-
The application of a recently isolated strain of Bacteroides (GB-124) to identify human sources of faecal pollution in a temperate river catchment
-
PMID:17275065
-
Ebdon J, Muniesa M, Taylor H. The application of a recently isolated strain of Bacteroides (GB-124) to identify human sources of faecal pollution in a temperate river catchment. Water Res 2007; 41:3683-90; PMID:17275065; http://dx.doi.org/10.1016/j. watres.2006.12.020.
-
(2007)
Water Res
, vol.41
, pp. 3683-3690
-
-
Ebdon, J.1
Muniesa, M.2
Taylor, H.3
-
40
-
-
77049127826
-
Comparative metage-nomic analysis of plasmid encoded functions in the human gut microbiome
-
PMID:20085629
-
Jones BV, Sun F, Marchesi JR. Comparative metage-nomic analysis of plasmid encoded functions in the human gut microbiome. BMC Genomics 2010; 11:46; PMID:20085629; http://dx.doi.org/10.1186/1471-2164-11-46.
-
(2010)
BMC Genomics
, vol.11
, pp. 46
-
-
Jones, B.V.1
Sun, F.2
Marchesi, J.R.3
-
41
-
-
84865094411
-
Comparative (meta)genomic analysis and ecological profiling of human gut-specific bac-teriophage φB124-14
-
PMID:22558115
-
Ogilvie LA, Caplin J, Dedi C, Diston D, Cheek E, Bowler L, et al. Comparative (meta)genomic analysis and ecological profiling of human gut-specific bac-teriophage φB124-14. PLoS One 2012; 7:e35053; PMID:22558115; http://dx.doi.org/10.1371/journal. pone.0035053.
-
(2012)
PLoS One
, vol.e35053
, pp. 7
-
-
Ogilvie, L.A.1
Caplin, J.2
Dedi, C.3
Diston, D.4
Cheek, E.5
Bowler, L.6
-
42
-
-
84871860604
-
Movers and shakers: Influence of bacterio-phages in shaping the mammalian gut microbiota
-
PMID:23022738
-
Mills S, Shanahan F, Stanton C, Hill C, Coffey A, Ross R P. Movers and shakers: influence of bacterio-phages in shaping the mammalian gut microbiota. Gut Microbes 2013; 4:4-16; PMID:23022738; http:// dx.doi.org/10.4161/gmic.22371.
-
(2013)
Gut Microbes
, vol.4
, pp. 4-16
-
-
Mills, S.1
Shanahan, F.2
Stanton, C.3
Hill, C.4
Coffey, A.5
Ross, R.P.6
-
43
-
-
33847151750
-
The antibiotic resistome: The nexus of chemical and genetic diversity
-
PMID:17277795
-
Wright GD. The antibiotic resistome: the nexus of chemical and genetic diversity. Nat Rev Microbiol 2007; 5:175-86; PMID:17277795; http://dx.doi. org/10.1038/nrmicro1614.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 175-186
-
-
Wright, G.D.1
-
44
-
-
84860516573
-
Carbapenem resistance in Enterobacteriaceae: Here is the storm!
-
PMID:22480775
-
Nordmann P, Dortet L, Poirel L. Carbapenem resistance in Enterobacteriaceae: here is the storm! Trends Mol Med 2012; 18:263-72; PMID:22480775; http:// dx.doi.org/10.1016/j.molmed.2012.03.003.
-
(2012)
Trends Mol Med
, vol.18
, pp. 263-272
-
-
Nordmann, P.1
Dortet, L.2
Poirel, L.3
-
45
-
-
84875181975
-
Global spread of antibiotic resistance: The example of New Delhi metallo-β-lactamase (NDM)-mediated carbapenem resistance
-
PMID:23329317
-
Johnson A P, Woodford N. Global spread of antibiotic resistance: the example of New Delhi metallo-β-lactamase (NDM)-mediated carbapenem resistance. J Med Microbiol 2013; 62:499-513; PMID:23329317; http://dx.doi.org/10.1099/jmm.0.052555-0.
-
(2013)
J Med Microbiol
, vol.62
, pp. 499-513
-
-
Johnson, A.P.1
Woodford, N.2
-
46
-
-
84866172604
-
Natural transformation facilitates transfer of transposons, integrons and gene cassettes between bacterial species
-
PMID:22876180
-
Domingues S, Harms K, Fricke W F, Johnsen PJ, da Silva GJ, Nielsen KM. Natural transformation facilitates transfer of transposons, integrons and gene cassettes between bacterial species. PLoS Pathog 2012; 8:e1002837; PMID:22876180; http://dx.doi. org/10.1371/journal.ppat.1002837.
-
(2012)
PLoS Pathog
, vol.e1002837
, pp. 8
-
-
Domingues, S.1
Harms, K.2
Fricke, W.F.3
Johnsen, P.J.4
da Silva, G.J.5
Nielsen, K.M.6
-
47
-
-
47249130872
-
The evolution of class 1 integrons and the rise of antibiotic resistance
-
PMID:18487337
-
Gillings M, Boucher Y, Labbate M, Holmes A, Krishnan S, Holley M, et al. The evolution of class 1 integrons and the rise of antibiotic resistance. J Bacteriol 2008; 190:5095-100; PMID:18487337; http://dx.doi.org/10.1128/JB.00152-08.
-
(2008)
J Bacteriol
, vol.190
, pp. 5095-5100
-
-
Gillings, M.1
Boucher, Y.2
Labbate, M.3
Holmes, A.4
Krishnan, S.5
Holley, M.6
-
48
-
-
66749102064
-
Gene cassettes and cassette arrays in mobile resistance integrons
-
PMID:1941636
-
Partridge SR, Tsafnat G, Coiera E, Iredell JR. Gene cassettes and cassette arrays in mobile resistance integrons. FEMS Microbiol Rev 2009; 33:757-84; PMID:19416365; http://dx.doi.org/10.1111/j.1574-6976.2009.00175.x.
-
(2009)
FEMS Microbiol Rev
, vol.33
, pp. 757-784
-
-
Partridge, S.R.1
Tsafnat, G.2
Coiera, E.3
Iredell, J.R.4
-
49
-
-
0037350819
-
Comparative analysis of superintegrons: Engineering extensive genetic diversity in the Vibrionaceae
-
PMID:12618374
-
Rowe-Magnus DA, Guerout AM, Biskri L, Bouige P, Mazel D. Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae. Genome Res 2003; 13:428-42; PMID:12618374; http://dx.doi.org/10.1101/gr.617103.
-
(2003)
Genome Res
, vol.13
, pp. 428-442
-
-
Rowe-Magnus, D.A.1
Guerout, A.M.2
Biskri, L.3
Bouige, P.4
Mazel, D.5
-
50
-
-
84865998603
-
Integrons and gene cassettes: Hotspots of diversity in bacterial genomes
-
PMID:22954219
-
Hall RM. Integrons and gene cassettes: hotspots of diversity in bacterial genomes. Ann N Y Acad Sci 2012; 1267:71-8; PMID:22954219; http://dx.doi. org/10.1111/j.1749-6632.2012.06588.x.
-
(2012)
Ann N Y Acad Sci
, vol.1267
, pp. 71-78
-
-
Hall, R.M.1
-
51
-
-
80053130409
-
Antibiotic resistance is ancient
-
PMID:21881561
-
D'Costa VM, King CE, Kalan L, Morar M, Sung W W, Schwarz C, et al. Antibiotic resistance is ancient. Nature 2011; 477:457-61; PMID:21881561; http:// dx.doi.org/10.1038/nature10388.
-
(2011)
Nature
, vol.477
, pp. 457-461
-
-
D'Costa, V.M.1
King, C.E.2
Kalan, L.3
Morar, M.4
Sung, W.W.5
Schwarz, C.6
-
52
-
-
0000123301
-
An enzyme from bacteria able to destroy penicillin
-
Abraham E, Chain E. An enzyme from bacteria able to destroy penicillin. Nature 1940; 146:837; http://dx.doi.org/10.1038/146837a0.
-
(1940)
Nature
, vol.146
, pp. 837
-
-
Abraham, E.1
Chain, E.2
-
54
-
-
0037417230
-
Vancomycin-Resistant Staphylococcus aureus Investigative Team. Infection with vancomycin-resistant Staphylococcus aureus containing the vanA resistance gene
-
PMID:12672861
-
Chang S, Sievert DM, Hageman JC, Boulton ML, Tenover FC, Downes F P, et al.; Vancomycin-Resistant Staphylococcus aureus Investigative Team. Infection with vancomycin-resistant Staphylococcus aureus containing the vanA resistance gene. N Engl J Med 2003; 348:1342-7; PMID:12672861; http://dx.doi. org/10.1056/NEJMoa025025.
-
(2003)
N Engl J Med
, vol.348
, pp. 1342-1347
-
-
Chang, S.1
Sievert, D.M.2
Hageman, J.C.3
Boulton, M.L.4
Tenover, F.C.5
Downes, F.P.6
-
55
-
-
39749192528
-
Vancomycin-resistant Staphylococcus aureus in the United States, 2002-2006
-
PMID:18257700
-
Sievert DM, Rudrik JT, Patel JB, McDonald LC, Wilkins MJ, Hageman JC. Vancomycin-resistant Staphylococcus aureus in the United States, 2002-2006. Clin Infect Dis 2008; 46:668-74; PMID:18257700; http://dx.doi.org/10.1086/527392.
-
(2008)
Clin Infect Dis
, vol.46
, pp. 668-674
-
-
Sievert, D.M.1
Rudrik, J.T.2
Patel, J.B.3
McDonald, L.C.4
Wilkins, M.J.5
Hageman, J.C.6
-
56
-
-
84863442671
-
Comparative genomics of vancomycin-resistant Staphylococcus aureus strains and their positions within the clade most commonly associated with Methicillin-resistant S. aureus hospital-acquired infection in the United States
-
PMID:22617140
-
Kos VN, Desjardins CA, Griggs A, Cerqueira G, Van Tonder A, Holden M T, et al. Comparative genomics of vancomycin-resistant Staphylococcus aureus strains and their positions within the clade most commonly associated with Methicillin-resistant S. aureus hospital-acquired infection in the United States. MBio 2012; 3:e00112-12; PMID:22617140; http://dx.doi. org/10.1128/mBio.00112-12.
-
(2012)
MBio
, vol.3
, pp. 112-122
-
-
Kos, V.N.1
Desjardins, C.A.2
Griggs, A.3
Cerqueira, G.4
van Tonder, A.5
Holden, M.T.6
-
57
-
-
84897918505
-
Participants of the 3rd World Healthcare-Associated Infections Forum. Ready for a world without antibiotics? The Pensières Antibiotic Resistance Call to Action
-
Carlet J, PMID:22958833
-
Carlet J, Jarlier V, Harbarth S, Voss A, Goossens H, Pittet D; Participants of the 3rd World Healthcare-Associated Infections Forum. Ready for a world without antibiotics? The Pensières Antibiotic Resistance Call to Action. Antimicrob Resist Infect Control 2012; 1:11; PMID:22958833; http://dx.doi.org/10.1186/2047-2994-1-11.
-
(2012)
Antimicrob Resist Infect Control
, vol.1
, pp. 11
-
-
Jarlier, V.1
Harbarth, S.2
Voss, A.3
Goossens, H.4
Pittet, D.5
-
58
-
-
84875264261
-
The heterogeneous evolution of multidrug-resistant Mycobacterium tuberculosis
-
PMID:23245857
-
Muller B, Borrell S, Rose G, Gagneux S. The heterogeneous evolution of multidrug-resistant Mycobacterium tuberculosis. Trends Genet 2012; 29:160-9; PMID:23245857; http://dx.doi.org/10.1016/j. tig.2012.11.005.
-
(2012)
Trends Genet
, vol.29
, pp. 160-169
-
-
Muller, B.1
Borrell, S.2
Rose, G.3
Gagneux, S.4
-
59
-
-
31144458334
-
Sampling the antibiotic resistome
-
PMID:16424339
-
D'Costa VM, McGrann KM, Hughes DW, Wright GD. Sampling the antibiotic resistome. Science 2006; 311:374-7; PMID:16424339; http://dx.doi. org/10.1126/science.1120800.
-
(2006)
Science
, vol.311
, pp. 374-377
-
-
D'Costa, V.M.1
McGrann, K.M.2
Hughes, D.W.3
Wright, G.D.4
-
60
-
-
84865531061
-
The shared antibiotic resistome of soil bacteria and human pathogens
-
PMID:22936781
-
Forsberg KJ, Reyes A, Wang B, Selleck EM, Sommer MO, Dantas G. The shared antibiotic resistome of soil bacteria and human pathogens. Science 2012; 337:1107-11; PMID:22936781; http://dx.doi. org/10.1126/science.1220761.
-
(2012)
Science
, vol.337
, pp. 1107-1111
-
-
Forsberg, K.J.1
Reyes, A.2
Wang, B.3
Selleck, E.M.4
Sommer, M.O.5
Dantas, G.6
-
61
-
-
56849106496
-
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing
-
PMID:19018661
-
Dethlefsen L, Huse S, Sogin ML, Relman DA. The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol 2008; 6:e280; PMID:19018661; http:// dx.doi.org/10.1371/journal.pbio.0060280.
-
(2008)
PLoS Biol
, vol.e280
, pp. 6
-
-
Dethlefsen, L.1
Huse, S.2
Sogin, M.L.3
Relman, D.A.4
-
62
-
-
78049494788
-
Short-term antibiotic treatment has differing long-term impacts on the human throat and gut microbiome
-
PMID:20352091
-
Jakobsson HE, Jernberg C, Andersson A F, Sjölund-Karlsson M, Jansson JK, Engstrand L. Short-term antibiotic treatment has differing long-term impacts on the human throat and gut microbiome. PLoS One 2010; 5:e9836; PMID:20352091; http://dx.doi. org/10.1371/journal.pone.0009836.
-
(2010)
PLoS One
, vol.e9836
, pp. 5
-
-
Jakobsson, H.E.1
Jernberg, C.2
Andersson, A.F.3
Sjölund-Karlsson, M.4
Jansson, J.K.5
Engstrand, L.6
-
63
-
-
84868036621
-
High-throughput sequencing reveals the incomplete, short-term recovery of infant gut microbiota following parenteral antibiotic treatment with ampicillin and gentamicin
-
PMID:22948872
-
Fouhy F, Guinane CM, Hussey S, Wall R, Ryan CA, Dempsey EM, et al. High-throughput sequencing reveals the incomplete, short-term recovery of infant gut microbiota following parenteral antibiotic treatment with ampicillin and gentamicin. Antimicrob Agents Chemother 2012; 56:5811-20; PMID:22948872; http://dx.doi.org/10.1128/AAC.00789-12.
-
(2012)
Antimicrob Agents Chemother
, vol.56
, pp. 5811-5820
-
-
Fouhy, F.1
Guinane, C.M.2
Hussey, S.3
Wall, R.4
Ryan, C.A.5
Dempsey, E.M.6
-
64
-
-
69549086653
-
Functional characterization of the antibiotic resistance reservoir in the human microflora
-
PMID:19713526
-
Sommer MO, Dantas G, Church GM. Functional characterization of the antibiotic resistance reservoir in the human microflora. Science 2009; 325:1128-31; PMID:19713526; http://dx.doi.org/10.1126/sci-ence.1176950.
-
(2009)
Science
, vol.325
, pp. 1128-1131
-
-
Sommer, M.O.1
Dantas, G.2
Church, G.M.3
-
65
-
-
55849121558
-
A new tetracycline efflux gene, tet(40), is located in tandem with tet(O/32/O) in a human gut firmicute bacterium and in metage-nomic library clones
-
PMID:18779355
-
Kazimierczak KA, Rincon M T, Patterson AJ, Martin JC, Young P, Flint HJ, et al. A new tetracycline efflux gene, tet(40), is located in tandem with tet(O/32/O) in a human gut firmicute bacterium and in metage-nomic library clones. Antimicrob Agents Chemother 2008; 52:4001-9; PMID:18779355; http://dx.doi. org/10.1128/AAC.00308-08.
-
(2008)
Antimicrob Agents Chemother
, vol.52
, pp. 4001-4009
-
-
Kazimierczak, K.A.1
Rincon, M.T.2
Patterson, A.J.3
Martin, J.C.4
Young, P.5
Flint, H.J.6
-
66
-
-
0037197849
-
Antibiotics in agriculture: When is it time to close the barn door?
-
PMID:11983874
-
Lipsitch M, Singer RS, Levin BR. Antibiotics in agriculture: when is it time to close the barn door? Proc Natl Acad Sci U S A 2002; 99:5752-4; PMID:11983874; http://dx.doi.org/10.1073/pnas.092142499.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 5752-5754
-
-
Lipsitch, M.1
Singer, R.S.2
Levin, B.R.3
-
67
-
-
0036921935
-
Persistence of vancomycin-resistant enterococci (VRE) in broiler houses after the avoparcin ban
-
PMID:12523633
-
Heuer OE, Pedersen K, Jensen LB, Madsen M, Olsen JE. Persistence of vancomycin-resistant enterococci (VRE) in broiler houses after the avoparcin ban. Microb Drug Resist 2002; 8:355-61; PMID:12523633; http:// dx.doi.org/10.1089/10766290260469624.
-
(2002)
Microb Drug Resist
, vol.8
, pp. 355-361
-
-
Heuer, O.E.1
Pedersen, K.2
Jensen, L.B.3
Madsen, M.4
Olsen, J.E.5
-
68
-
-
1642316287
-
A vancomycin-resistant Enterococcus faecium isolate from a Danish healthy volunteer, detected 7 years after the ban of avopar-cin, is possibly related to pig isolates
-
PMID:14762053
-
Hammerum AM, Lester CH, Neimann J, Porsbo LJ, Olsen KE, Jensen LB, et al. A vancomycin-resistant Enterococcus faecium isolate from a Danish healthy volunteer, detected 7 years after the ban of avopar-cin, is possibly related to pig isolates. J Antimicrob Chemother 2004; 53:547-9; PMID:14762053; http:// dx.doi.org/10.1093/jac/dkh101.
-
(2004)
J Antimicrob Chemother
, vol.53
, pp. 547-549
-
-
Hammerum, A.M.1
Lester, C.H.2
Neimann, J.3
Porsbo, L.J.4
Olsen, K.E.5
Jensen, L.B.6
-
69
-
-
25144446965
-
Occurrence and relatedness of vancomycin-resistant enterococci in animals, humans, and the environment in different European regions
-
PMID:16151128
-
Kühn I, Iversen A, Finn M, Greko C, Burman LG, Blanch AR, et al. Occurrence and relatedness of vancomycin-resistant enterococci in animals, humans, and the environment in different European regions. Appl Environ Microbiol 2005; 71:5383-90; PMID:16151128; http://dx.doi.org/10.1128/ AEM.71.9.5383-5390.2005.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 5383-5390
-
-
Kühn, I.1
Iversen, A.2
Finn, M.3
Greko, C.4
Burman, L.G.5
Blanch, A.R.6
-
70
-
-
0032493115
-
Emergence of multidrug-resistant Salmonella enterica serotype typhimurium DT104 infections in the United States
-
PMID:9571252
-
Glynn MK, Bopp C, Dewitt W, Dabney P, Mokhtar M, Angulo FJ. Emergence of multidrug-resistant Salmonella enterica serotype typhimurium DT104 infections in the United States. N Engl J Med 1998; 338:1333-8; PMID:9571252; http://dx.doi. org/10.1056/NEJM199805073381901.
-
(1998)
N Engl J Med
, vol.338
, pp. 1333-1338
-
-
Glynn, M.K.1
Bopp, C.2
Dewitt, W.3
Dabney, P.4
Mokhtar, M.5
Angulo, F.J.6
-
71
-
-
33847611542
-
Antibiotic resistance of Campylobacter jejuni and Campylobacter coli clinical isolates from Poland
-
PMID:17210776
-
Wardak S, Szych J, Zasada AA, Gierczynski R. Antibiotic resistance of Campylobacter jejuni and Campylobacter coli clinical isolates from Poland. Antimicrob Agents Chemother 2007; 51:1123-5; PMID:17210776; http://dx.doi.org/10.1128/AAC.01187-06.
-
(2007)
Antimicrob Agents Chemother
, vol.51
, pp. 1123-1125
-
-
Wardak, S.1
Szych, J.2
Zasada, A.A.3
Gierczynski, R.4
-
72
-
-
40449100384
-
Comparison of antimicrobial resistance of Campylobacter jejuni and Campylobacter coli isolated from humans and chicken carcasses in Poland
-
PMID:18389707
-
Rozynek E, Dzierzanowska-Fangrat K, Korsak D, Konieczny P, Wardak S, Szych J, et al. Comparison of antimicrobial resistance of Campylobacter jejuni and Campylobacter coli isolated from humans and chicken carcasses in Poland. J Food Prot 2008; 71:602-7; PMID:18389707.
-
(2008)
J Food Prot
, vol.71
, pp. 602-607
-
-
Rozynek, E.1
Dzierzanowska-Fangrat, K.2
Korsak, D.3
Konieczny, P.4
Wardak, S.5
Szych, J.6
-
73
-
-
84857135712
-
In-feed antibiotic effects on the swine intestinal microbiome
-
PMID:22307632
-
Looft T, Johnson TA, Allen HK, Bayles DO, Alt D P, Stedtfeld RD, et al. In-feed antibiotic effects on the swine intestinal microbiome. Proc Natl Acad Sci U S A 2012; 109:1691-6; PMID:22307632; http://dx.doi. org/10.1073/pnas.1120238109.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 1691-1696
-
-
Looft, T.1
Johnson, T.A.2
Allen, H.K.3
Bayles, D.O.4
Alt, D.P.5
Stedtfeld, R.D.6
-
74
-
-
84865477413
-
Antibiotics in early life alter the murine colonic microbiome and adiposity
-
PMID:22914093
-
Cho I, Yamanishi S, Cox L, Methé BA, Zavadil J, Li K, et al. Antibiotics in early life alter the murine colonic microbiome and adiposity. Nature 2012; 488:621-6; PMID:22914093; http://dx.doi.org/10.1038/ nature11400.
-
(2012)
Nature
, vol.488
, pp. 621-626
-
-
Cho, I.1
Yamanishi, S.2
Cox, L.3
Methé, B.A.4
Zavadil, J.5
Li, K.6
-
75
-
-
84872116197
-
Infant antibiotic exposures and early-life body mass
-
PMID:22907693
-
Trasande L, Blustein J, Liu M, Corwin E, Cox LM, Blaser MJ. Infant antibiotic exposures and early-life body mass. Int J Obes (Lond) 2013; 37:16-23; PMID:22907693; http://dx.doi.org/10.1038/ ijo.2012.132.
-
(2013)
Int J Obes (Lond)
, vol.37
, pp. 16-23
-
-
Trasande, L.1
Blustein, J.2
Liu, M.3
Corwin, E.4
Cox, L.M.5
Blaser, M.J.6
-
76
-
-
84860668802
-
Lethal inflamma-some activation by a multidrug-resistant pathobiont upon antibiotic disruption of the microbiota
-
PMID:22522562
-
Ayres JS, Trinidad NJ, Vance RE. Lethal inflamma-some activation by a multidrug-resistant pathobiont upon antibiotic disruption of the microbiota. Nat Med 2012; 18:799-806; PMID:22522562; http://dx.doi. org/10.1038/nm.2729.
-
(2012)
Nat Med
, vol.18
, pp. 799-806
-
-
Ayres, J.S.1
Trinidad, N.J.2
Vance, R.E.3
-
77
-
-
4444382949
-
Human intestinal bacteria as reservoirs for antibiotic resistance genes
-
PMID:15337162
-
Salyers AA, Gupta A, Wang Y. Human intestinal bacteria as reservoirs for antibiotic resistance genes. Trends Microbiol 2004; 12:412-6; PMID:15337162; http:// dx.doi.org/10.1016/j.tim.2004.07.004.
-
(2004)
Trends Microbiol
, vol.12
, pp. 412-416
-
-
Salyers, A.A.1
Gupta, A.2
Wang, Y.3
-
78
-
-
0014682104
-
Transferable drug resistance in entero-bacteria isolated from urban infants
-
PMID:4889237
-
Moorhouse EC. Transferable drug resistance in entero-bacteria isolated from urban infants. Br Med J 1969; 2:405-7; PMID:4889237; http://dx.doi.org/10.1136/ bmj.2.5654.405.
-
(1969)
Br Med J
, vol.2
, pp. 405-407
-
-
Moorhouse, E.C.1
-
79
-
-
0015304256
-
Antibiotic resistance and transmissible R-factors in the intestinal coliform flora of healthy adults and children in an urban and a rural community
-
PMID:4552258
-
Linton KB, Lee PA, Richmond MH, Gillespie WA, Rowland AJ, Baker VN. Antibiotic resistance and transmissible R-factors in the intestinal coliform flora of healthy adults and children in an urban and a rural community. J Hyg (Lond) 1972; 70:99-104; PMID:4552258; http://dx.doi.org/10.1017/ S0022172400022130.
-
(1972)
J Hyg (Lond)
, vol.70
, pp. 99-104
-
-
Linton, K.B.1
Lee, P.A.2
Richmond, M.H.3
Gillespie, W.A.4
Rowland, A.J.5
Baker, V.N.6
-
80
-
-
0023794266
-
High frequency of antimicrobial resistance in human fecal flora
-
PMID:3266729
-
Levy SB, Marshall B, Schluederberg S, Rowse D, Davis J. High frequency of antimicrobial resistance in human fecal flora. Antimicrob Agents Chemother 1988; 32:1801-6; PMID:3266729; http://dx.doi. org/10.1128/AAC.32.12.1801.
-
(1988)
Antimicrob Agents Chemother
, vol.32
, pp. 1801-1806
-
-
Levy, S.B.1
Marshall, B.2
Schluederberg, S.3
Rowse, D.4
Davis, J.5
-
81
-
-
0025362001
-
The carriage of Escherichia coli resistant to antimicrobial agents by healthy children in Boston, in Caracas, Venezuela, and in Qin Pu, China
-
PMID:2195344
-
Lester SC, del Pilar Pla M, Wang F, Perez Schael I, Jiang H, O'Brien T F. The carriage of Escherichia coli resistant to antimicrobial agents by healthy children in Boston, in Caracas, Venezuela, and in Qin Pu, China. N Engl J Med 1990; 323:285-9; PMID:2195344; http://dx.doi.org/10.1056/NEJM199008023230501.
-
(1990)
N Engl J Med
, vol.323
, pp. 285-289
-
-
Lester, S.C.1
Del, P.P.M.2
Wang, F.3
Perez Schael, I.4
Jiang, H.5
O'Brien, T.F.6
-
82
-
-
0026674686
-
Antibiotic resistance of Escherichia coli in fecal samples of healthy people in two different areas in an industrialized country
-
PMID:1428182
-
Bonten M, Stobberingh E, Philips J, Houben A. Antibiotic resistance of Escherichia coli in fecal samples of healthy people in two different areas in an industrialized country. Infection 1992; 20:258-62; PMID:1428182; http://dx.doi.org/10.1007/ BF01710790.
-
(1992)
Infection
, vol.20
, pp. 258-262
-
-
Bonten, M.1
Stobberingh, E.2
Philips, J.3
Houben, A.4
-
83
-
-
0028228336
-
Carriage of antibiotic-resistant Escherichia coli by healthy volunteers during a 15-week period
-
PMID:7927814
-
London N, Nijsten R, van der Bogaard A, Stobberingh E. Carriage of antibiotic-resistant Escherichia coli by healthy volunteers during a 15-week period. Infection 1994; 22:187-92; PMID:7927814; http://dx.doi. org/10.1007/BF01716700.
-
(1994)
Infection
, vol.22
, pp. 187-192
-
-
London, N.1
Nijsten, R.2
van der Bogaard, A.3
Stobberingh, E.4
-
84
-
-
0029884810
-
Antimicrobial resistance in fecal flora: Longitudinal community-based surveillance of children from urban Mexico
-
PMID:8807065
-
Calva JJ, Sifuentes-Osornio J, Cerón C. Antimicrobial resistance in fecal flora: longitudinal community-based surveillance of children from urban Mexico. Antimicrob Agents Chemother 1996; 40:1699-702; PMID:8807065.
-
(1996)
Antimicrob Agents Chemother
, vol.40
, pp. 1699-1702
-
-
Calva, J.J.1
Sifuentes-Osornio, J.2
Cerón, C.3
-
85
-
-
0034036201
-
A between-species comparison of antimicrobial resistance in enterobac-teria in fecal flora
-
PMID:10817696;
-
Österblad M, Hakanen A, Manninen R, Leistevuo T, Peltonen R, Meurman O, et al. A between-species comparison of antimicrobial resistance in enterobac-teria in fecal flora. Antimicrob Agents Chemother 2000; 44:1479-84; PMID:10817696; http://dx.doi. org/10.1128/AAC.44.6.1479-1484.2000.
-
(2000)
Antimicrob Agents Chemother
, vol.44
, pp. 1479-1484
-
-
Österblad, M.1
Hakanen, A.2
Manninen, R.3
Leistevuo, T.4
Peltonen, R.5
Meurman, O.6
-
86
-
-
0035024940
-
ALSPAC Study Team. Avon Longitudinal Study of Pregnancy and Childhood. Carriage of antibiotic-resistant bacteria by healthy children
-
PMID:11328771
-
Millar MR, Walsh TR, Linton CJ, Zhang S, Leeming J P, Bennett PM; ALSPAC Study Team. Avon Longitudinal Study of Pregnancy and Childhood. Carriage of antibiotic-resistant bacteria by healthy children. J Antimicrob Chemother 2001; 47:605-10; PMID:11328771; http://dx.doi.org/10.1093/jac/47.5.605.
-
(2001)
J Antimicrob Chemother
, vol.47
, pp. 605-610
-
-
Millar, M.R.1
Walsh, T.R.2
Linton, C.J.3
Zhang, S.4
Leeming, J.P.5
Bennett, P.M.6
-
87
-
-
0034001488
-
Occurrence of the new tetracycline resistance gene tet(W) in bacteria from the human gut
-
PMID:10681357
-
Scott K P, Melville CM, Barbosa TM, Flint HJ. Occurrence of the new tetracycline resistance gene tet(W) in bacteria from the human gut. Antimicrob Agents Chemother 2000; 44:775-7; PMID:10681357; http://dx.doi.org/10.1128/AAC.44.3.775-777.2000.
-
(2000)
Antimicrob Agents Chemother
, vol.44
, pp. 775-777
-
-
Scott, K.P.1
Melville, C.M.2
Barbosa, T.M.3
Flint, H.J.4
-
88
-
-
0030772052
-
High-frequency transfer of a naturally occurring chromosomal tetracycline resistance element in the ruminal anaerobe Butyrivibrio fibrisolvens
-
PMID:9292992
-
Scott K P, Barbosa TM, Forbes KJ, Flint HJ. High-frequency transfer of a naturally occurring chromosomal tetracycline resistance element in the ruminal anaerobe Butyrivibrio fibrisolvens. Appl Environ Microbiol 1997; 63:3405-11; PMID:9292992.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 3405-3411
-
-
Scott, K.P.1
Barbosa, T.M.2
Forbes, K.J.3
Flint, H.J.4
-
89
-
-
0034774482
-
Novel tetracycline resistance gene, tet(32), in the Clostridium-related human colonic anaerobe K10 and its transmission in vitro to the rumen anaerobe Butyrivibrio fibrisolvens
-
PMID:11600392
-
Melville CM, Scott K P, Mercer DK, Flint HJ. Novel tetracycline resistance gene, tet(32), in the Clostridium-related human colonic anaerobe K10 and its transmission in vitro to the rumen anaerobe Butyrivibrio fibrisolvens. Antimicrob Agents Chemother 2001; 45:3246-9; PMID:11600392; http://dx.doi. org/10.1128/AAC.45.11.3246-3249.2001.
-
(2001)
Antimicrob Agents Chemother
, vol.45
, pp. 3246-3249
-
-
Melville, C.M.1
Scott, K.P.2
Mercer, D.K.3
Flint, H.J.4
-
90
-
-
0035142427
-
Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colon
-
PMID:11157217
-
Shoemaker NB, Vlamakis H, Hayes K, Salyers AA. Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colon. Appl Environ Microbiol 2001; 67:561-8; PMID:11157217; http://dx.doi. org/10.1128/AEM.67.2.561-568.2001.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 561-568
-
-
Shoemaker, N.B.1
Vlamakis, H.2
Hayes, K.3
Salyers, A.A.4
-
91
-
-
0036966971
-
The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genes
-
PMID:12568330
-
Whittle G, Shoemaker NB, Salyers AA. The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genes. Cell Mol Life Sci 2002; 59:2044-54; PMID:12568330; http://dx.doi. org/10.1007/s000180200004.
-
(2002)
Cell Mol Life Sci
, vol.59
, pp. 2044-2054
-
-
Whittle, G.1
Shoemaker, N.B.2
Salyers, A.A.3
-
92
-
-
45749109086
-
Transfer of con-jugative elements from rumen and human Firmicutes bacteria to Roseburia inulinivorans
-
PMID:18456856
-
Scott K P, Martin JC, Mrazek J, Flint HJ. Transfer of con-jugative elements from rumen and human Firmicutes bacteria to Roseburia inulinivorans. Appl Environ Microbiol 2008; 74:3915-7; PMID:18456856; http:// dx.doi.org/10.1128/AEM.02807-07.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 3915-3917
-
-
Scott, K.P.1
Martin, J.C.2
Mrazek, J.3
Flint, H.J.4
-
93
-
-
69549086653
-
Functional characterization of the antibiotic resistance reservoir in the human microflora
-
PMID:19713526
-
Sommer MO, Dantas G, Church GM. Functional characterization of the antibiotic resistance reservoir in the human microflora. Science 2009; 325:1128-31; PMID:19713526; http://dx.doi.org/10.1126/sci-ence.1176950.
-
(2009)
Science
, vol.325
, pp. 1128-1131
-
-
Sommer, M.O.1
Dantas, G.2
Church, G.M.3
-
94
-
-
77951135447
-
The dissemination of C10 cysteine protease genes in Bacteroides fragilis by mobile genetic elements
-
PMID:20416045
-
Thornton RF, Kagawa TF, O'Toole PW, Cooney JC. The dissemination of C10 cysteine protease genes in Bacteroides fragilis by mobile genetic elements. BMC Microbiol 2010; 10:122; PMID:20416045; http:// dx.doi.org/10.1186/1471-2180-10-122.
-
(2010)
BMC Microbiol
, vol.10
, pp. 122
-
-
Thornton, R.F.1
Kagawa, T.F.2
O'Toole, P.W.3
Cooney, J.C.4
-
95
-
-
78650546259
-
Genetic analysis of mobile tetQ elements in oral Prevotella species
-
PMID:20826220
-
Tribble GD, Garza JJ, Yeung VL, Rigney TW, Dao DH, Rodrigues PH, et al. Genetic analysis of mobile tetQ elements in oral Prevotella species. Anaerobe 2010; 16:604-9; PMID:20826220; http://dx.doi. org/10.1016/j.anaerobe.2010.08.008.
-
(2010)
Anaerobe
, vol.16
, pp. 604-609
-
-
Tribble, G.D.1
Garza, J.J.2
Yeung, V.L.3
Rigney, T.W.4
Dao, D.H.5
Rodrigues, P.H.6
-
96
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
Consortium HMP; Human Microbiome Project Consortium, PMID:22699609;
-
Consortium HMP; Human Microbiome Project Consortium. Structure, function and diversity of the healthy human microbiome. Nature 2012; 486:207-14; PMID:22699609; http://dx.doi.org/10.1038/ nature11234.
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
-
97
-
-
58149183697
-
ARDB--Antibiotic Resistance Genes Database
-
PMID:18832362, Database issue
-
Liu B, Pop M. ARDB--Antibiotic Resistance Genes Database. Nucleic Acids Res 2009; 37(Database issue):D443-7; PMID:18832362; http://dx.doi. org/10.1093/nar/gkn656.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 443-447
-
-
Liu, B.1
Pop, M.2
-
98
-
-
79551622954
-
Strain-resolved community genomic analysis of gut microbial colonization in a premature infant
-
PMID:21191099
-
Morowitz MJ, Denef VJ, Costello EK, Thomas BC, Poroyko V, Relman DA, et al. Strain-resolved community genomic analysis of gut microbial colonization in a premature infant. Proc Natl Acad Sci U S A 2011; 108:1128-33; PMID:21191099; http://dx.doi. org/10.1073/pnas.1010992108.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 1128-1133
-
-
Morowitz, M.J.1
Denef, V.J.2
Costello, E.K.3
Thomas, B.C.4
Poroyko, V.5
Relman, D.A.6
-
99
-
-
84864037467
-
Metabolic reconstruction for metagenomic data and its application to the human microbiome
-
PMID:22719234
-
Abubucker S, Segata N, Goll J, Schubert AM, Izard J, Cantarel BL, et al. Metabolic reconstruction for metagenomic data and its application to the human microbiome. PLoS Comput Biol 2012; 8:e1002358; PMID:22719234; http://dx.doi.org/10.1371/journal. pcbi.1002358
-
(2012)
PLoS Comput Biol
, vol.e1002358
, pp. 8
-
-
Abubucker, S.1
Segata, N.2
Goll, J.3
Schubert, A.M.4
Izard, J.5
Cantarel, B.L.6
|