-
1
-
-
77949874234
-
Histone variants. Ancient wrap artists of the epigenome
-
Talbert, P. B., and Henikoff, S. (2010) Histone variants. Ancient wrap artists of the epigenome. Nat. Rev. Mol. Cell Biol. 11, 264-275
-
(2010)
Nat. Rev. Mol. Cell Biol
, vol.11
, pp. 264-275
-
-
Talbert, P.B.1
Henikoff, S.2
-
2
-
-
69849107380
-
The life and miracles of kinetochores
-
Santaguida, S., and Musacchio, A. (2009) The life and miracles of kinetochores. EMBO J. 28, 2511-2531
-
(2009)
EMBO J.
, vol.28
, pp. 2511-2531
-
-
Santaguida, S.1
Musacchio, A.2
-
3
-
-
84859467582
-
Evolution of histone H3. Emergence of variants and conservation of post-translational modification sites
-
Waterborg, J. H. (2012) Evolution of histone H3. Emergence of variants and conservation of post-translational modification sites. Biochem. Cell Biol. 90, 79-95
-
(2012)
Biochem. Cell Biol
, vol.90
, pp. 79-95
-
-
Waterborg, J.H.1
-
4
-
-
0036299092
-
The histone variant H3.3 marks active chromatin by replication- independent nucleosome assembly
-
Ahmad, K., and Henikoff, S. (2002) The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly. Mol. Cell 9, 1191-1200
-
(2002)
Mol. Cell
, vol.9
, pp. 1191-1200
-
-
Ahmad, K.1
Henikoff, S.2
-
5
-
-
17044394787
-
Transcriptional activation triggers deposition and removal of the histone variant H3.3
-
Schwartz, B. E., and Ahmad, K. (2005) Transcriptional activation triggers deposition and removal of the histone variant H3.3. Genes Dev. 19, 804-814
-
(2005)
Genes Dev
, vol.19
, pp. 804-814
-
-
Schwartz, B.E.1
Ahmad, K.2
-
6
-
-
79952536146
-
The double face of the histone variant H3.3
-
Szenker, E., Ray-Gallet, D., and Almouzni, G. (2011) The double face of the histone variant H3.3. Cell Res. 21, 421-434
-
(2011)
Cell Res
, vol.21
, pp. 421-434
-
-
Szenker, E.1
Ray-Gallet, D.2
Almouzni, G.3
-
7
-
-
77954490394
-
New chaps in the histone chaperone arena
-
Campos, E. I., and Reinberg, D. (2010) New chaps in the histone chaperone arena. Genes Dev. 24, 1334-1338
-
(2010)
Genes Dev
, vol.24
, pp. 1334-1338
-
-
Campos, E.I.1
Reinberg, D.2
-
8
-
-
77952241644
-
New functions for an old variant. No substitute for histone H3.3
-
Elsaesser, S. J., Goldberg, A. D., and Allis, C. D. (2010) New functions for an old variant. No substitute for histone H3.3. Curr. Opin. Genet. Dev. 20, 110-117
-
(2010)
Curr. Opin. Genet. Dev
, vol.20
, pp. 110-117
-
-
Elsaesser, S.J.1
Goldberg, A.D.2
Allis, C.D.3
-
9
-
-
84872015424
-
Single cell analysis of Daxx and ATRX-dependent transcriptional repression
-
Newhart, A., Rafalska-Metcalf, I. U., Yang, T., Negorev, D. G., and Janicki, S. M. (2012) Single cell analysis of Daxx and ATRX-dependent transcriptional repression. J. Cell Sci. 125, 5489-5501
-
(2012)
J. Cell Sci
, vol.125
, pp. 5489-5501
-
-
Newhart, A.1
Rafalska-Metcalf, I.U.2
Yang, T.3
Negorev, D.G.4
Janicki, S.M.5
-
10
-
-
77953955724
-
The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3
-
Drané, P., Ouararhni, K., Depaux, A., Shuaib, M., and Hamiche, A. (2010) The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3. Genes Dev. 24, 1253-1265
-
(2010)
Genes Dev
, vol.24
, pp. 1253-1265
-
-
Drané, P.1
Ouararhni, K.2
Depaux, A.3
Shuaib, M.4
Hamiche, A.5
-
11
-
-
77649099092
-
Distinct factors control histone variant H3.3 localization at specific genomic regions
-
Goldberg, A. D., Banaszynski, L. A., Noh, K. M., Lewis, P. W., Elsaesser, S. J., Stadler, S., Dewell, S., Law, M., Guo, X., Li, X., Wen, D., Chapgier, A., DeKelver, R. C., Miller, J. C., Lee, Y. L., Boydston, E. A., Holmes, M. C., Gregory, P. D., Greally, J. M., Rafii, S., Yang, C., Scambler, P. J., Garrick, D., Gibbons, R. J., Higgs, D. R., Cristea, I. M., Urnov, F. D., Zheng, D., and Allis, C. D. (2010) Distinct factors control histone variant H3.3 localization at specific genomic regions. Cell 140, 678-691
-
(2010)
Cell
, vol.140
, pp. 678-691
-
-
Goldberg, A.D.1
Banaszynski, L.A.2
Noh, K.M.3
Lewis, P.W.4
Elsaesser, S.J.5
Stadler, S.6
Dewell, S.7
Law, M.8
Guo, X.9
Li, X.10
Wen, D.11
Chapgier, A.12
Dekelver, R.C.13
Miller, J.C.14
Lee, Y.L.15
Boydston, E.A.16
Holmes, M.C.17
Gregory, P.D.18
Greally, J.M.19
Rafii, S.20
Yang, C.21
Scambler, P.J.22
Garrick, D.23
Gibbons, R.J.24
Higgs, D.R.25
Cristea, I.M.26
Urnov, F.D.27
Zheng, D.28
Allis, C.D.29
more..
-
12
-
-
77956282773
-
Daxx is an H3.3-specific histone chaperone and cooperates with ATRX in replication-independent chromatin assembly at telomeres
-
Lewis, P. W., Elsaesser, S. J., Noh, K. M., Stadler, S. C., and Allis, C. D. (2010) Daxx is an H3.3-specific histone chaperone and cooperates with ATRX in replication-independent chromatin assembly at telomeres. Proc. Natl. Acad. Sci. U.S.A. 107, 14075-14080
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 14075-14080
-
-
Lewis, P.W.1
Elsaesser, S.J.2
Noh, K.M.3
Stadler, S.C.4
Allis, C.D.5
-
13
-
-
19944427674
-
Formation of MacroH2A-containing senescence-associated heterochromatin foci and senescence driven by ASF1a and HIRA
-
Zhang, R., Poustovoitov, M. V., Ye, X., Santos, H. A., Chen, W., Daganzo, S. M., Erzberger, J. P., Serebriiskii, I. G., Canutescu, A. A., Dunbrack, R. L., Pehrson, J. R., Berger, J. M., Kaufman, P. D., and Adams, P. D. (2005) Formation of MacroH2A-containing senescence-associated heterochromatin foci and senescence driven by ASF1a and HIRA. Dev. Cell 8, 19-30
-
(2005)
Dev. Cell
, vol.8
, pp. 19-30
-
-
Zhang, R.1
Poustovoitov, M.V.2
Ye, X.3
Santos, H.A.4
Chen, W.5
Daganzo, S.M.6
Erzberger, J.P.7
Serebriiskii, I.G.8
Canutescu, A.A.9
Dunbrack, R.L.10
Pehrson, J.R.11
Berger, J.M.12
Kaufman, P.D.13
Adams, P.D.14
-
14
-
-
80053581112
-
Human CABIN1 is a functional member of the human HIRA/UBN1/ASF1a histone H3.3 chaperone complex
-
Rai, T. S., Puri, A., McBryan, T., Hoffman, J., Tang, Y., Pchelintsev, N. A., van Tuyn, J., Marmorstein, R., Schultz, D. C., and Adams, P. D. (2011) Human CABIN1 is a functional member of the human HIRA/UBN1/ASF1a histone H3.3 chaperone complex. Mol. Cell Biol. 31, 4107-4118
-
(2011)
Mol. Cell Biol
, vol.31
, pp. 4107-4118
-
-
Rai, T.S.1
Puri, A.2
McBryan, T.3
Hoffman, J.4
Tang, Y.5
Pchelintsev, N.A.6
Van Tuyn, J.7
Marmorstein, R.8
Schultz, D.C.9
Adams, P.D.10
-
15
-
-
35948990898
-
The essential role of Drosophila HIRA for de novo assembly of paternal chromatin at fertilization
-
Bonnefoy, E., Orsi, G. A., Couble, P., and Loppin, B. (2007) The essential role of Drosophila HIRA for de novo assembly of paternal chromatin at fertilization. PLoS Genet. 3, 1991-2006
-
(2007)
PLoS Genet
, vol.3
, pp. 1991-2006
-
-
Bonnefoy, E.1
Orsi, G.A.2
Couble, P.3
Loppin, B.4
-
16
-
-
27644515513
-
The histone H3.3 chaperone HIRA is essential for chromatin assembly in the male pronucleus
-
Loppin, B., Bonnefoy, E., Anselme, C., Laurençon, A., Karr, T. L., and Couble, P. (2005) The histone H3.3 chaperone HIRA is essential for chromatin assembly in the male pronucleus. Nature 437, 1386-1390
-
(2005)
Nature
, vol.437
, pp. 1386-1390
-
-
Loppin, B.1
Bonnefoy, E.2
Anselme, C.3
Laurençon, A.4
Karr, T.L.5
Couble, P.6
-
17
-
-
34548272156
-
CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo
-
Konev, A. Y., Tribus, M., Park, S. Y., Podhraski, V., Lim, C. Y., Emelyanov, A. V., Vershilova, E., Pirrotta, V., Kadonaga, J. T., Lusser, A., and Fyodorov, D. V. (2007) CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo. Science 317, 1087-1090
-
(2007)
Science
, vol.317
, pp. 1087-1090
-
-
Konev, A.Y.1
Tribus, M.2
Park, S.Y.3
Podhraski, V.4
Lim, C.Y.5
Emelyanov, A.V.6
Vershilova, E.7
Pirrotta, V.8
Kadonaga, J.T.9
Lusser, A.10
Fyodorov, D.V.11
-
18
-
-
84863812324
-
Chd2 interacts with H3.3 to determine myogenic cell fate
-
Harada, A., Okada, S., Konno, D., Odawara, J., Yoshimi, T., Yoshimura, S., Kumamaru, H., Saiwai, H., Tsubota, T., Kurumizaka, H., Akashi, K., Tachibana, T., Imbalzano, A. N., and Ohkawa, Y. (2012) Chd2 interacts with H3.3 to determine myogenic cell fate. EMBO J. 31, 2994-3007
-
(2012)
EMBO J.
, vol.31
, pp. 2994-3007
-
-
Harada, A.1
Okada, S.2
Konno, D.3
Odawara, J.4
Yoshimi, T.5
Yoshimura, S.6
Kumamaru, H.7
Saiwai, H.8
Tsubota, T.9
Kurumizaka, H.10
Akashi, K.11
Tachibana, T.12
Imbalzano, A.N.13
Ohkawa, Y.14
-
19
-
-
27144510368
-
Genome-scale profiling of histone H3.3 replacement patterns
-
Mito, Y., Henikoff, J. G., and Henikoff, S. (2005) Genome-scale profiling of histone H3.3 replacement patterns. Nat. Genet. 37, 1090-1097
-
(2005)
Nat. Genet
, vol.37
, pp. 1090-1097
-
-
Mito, Y.1
Henikoff, J.G.2
Henikoff, S.3
-
20
-
-
23744460663
-
Variant histone H3.3 is deposited at sites of nucleosomal displacement throughout transcribed genes while active histone modifications show a promoter-proximal bias
-
Wirbelauer, C., Bell, O., and Schübeler, D. (2005) Variant histone H3.3 is deposited at sites of nucleosomal displacement throughout transcribed genes while active histone modifications show a promoter-proximal bias. Genes Dev. 19, 1761-1766
-
(2005)
Genes Dev
, vol.19
, pp. 1761-1766
-
-
Wirbelauer, C.1
Bell, O.2
Schübeler, D.3
-
21
-
-
84863706580
-
Dynamic deposition of histone variant H3.3 accompanies developmental remodeling of the Arabidopsis transcriptome
-
Wollmann, H., Holec, S., Alden, K., Clarke, N. D., Jacques, P. É ., and Berger, F. (2012) Dynamic deposition of histone variant H3.3 accompanies developmental remodeling of the Arabidopsis transcriptome. PLoS Genet. 8, e1002658
-
(2012)
PLoS Genet
, vol.8
-
-
Wollmann, H.1
Holec, S.2
Alden, K.3
Clarke, N.D.4
Jacques, P.É.5
Berger, F.6
-
22
-
-
31144445949
-
Dynamic regulation of replication independent deposition of histone H3 in fission yeast
-
Choi, E. S., Shin, J. A., Kim, H. S., and Jang, Y. K. (2005) Dynamic regulation of replication independent deposition of histone H3 in fission yeast. Nucleic Acids Res. 33, 7102-7110
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 7102-7110
-
-
Choi, E.S.1
Shin, J.A.2
Kim, H.S.3
Jang, Y.K.4
-
23
-
-
68149150830
-
H3.3/H2A.Z double variant-containing nucleosomes mark "nucleosome-free regions" of active promoters and other regulatory regions
-
Jin, C., Zang, C., Wei, G., Cui, K., Peng, W., Zhao, K., and Felsenfeld, G. (2009) H3.3/H2A.Z double variant-containing nucleosomes mark "nucleosome-free regions" of active promoters and other regulatory regions. Nat. Genet. 41, 941-945
-
(2009)
Nat. Genet
, vol.41
, pp. 941-945
-
-
Jin, C.1
Zang, C.2
Wei, G.3
Cui, K.4
Peng, W.5
Zhao, K.6
Felsenfeld, G.7
-
24
-
-
66449111160
-
Inducible deposition of the histone variant H3.3 in interferon-stimulated genes
-
Tamura, T., Smith, M., Kanno, T., Dasenbrock, H., Nishiyama, A., and Ozato, K. (2009) Inducible deposition of the histone variant H3.3 in interferon-stimulated genes. J. Biol. Chem. 284, 12217-12225
-
(2009)
J. Biol. Chem
, vol.284
, pp. 12217-12225
-
-
Tamura, T.1
Smith, M.2
Kanno, T.3
Dasenbrock, H.4
Nishiyama, A.5
Ozato, K.6
-
25
-
-
77951160864
-
A native chromatin purification system for epigenomic profiling in Caenorhabditis elegans
-
Ooi, S. L., Henikoff, J. G., and Henikoff, S. (2010) A native chromatin purification system for epigenomic profiling in Caenorhabditis elegans. Nucleic Acids Res. 38, e26
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Ooi, S.L.1
Henikoff, J.G.2
Henikoff, S.3
-
26
-
-
84859467840
-
Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana
-
Stroud, H., Otero, S., Desvoyes, B., Ramírez-Parra, E., Jacobsen, S. E., and Gutierrez, C. (2012) Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana. Proc. Natl. Acad. Sci. U.S.A. 109, 5370-5375
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 5370-5375
-
-
Stroud, H.1
Otero, S.2
Desvoyes, B.3
Ramírez-Parra, E.4
Jacobsen, S.E.5
Gutierrez, C.6
-
27
-
-
79960700556
-
Altered telomeres in tumors with ATRX and DAXX mutations
-
Heaphy, C. M., de Wilde, R. F., Jiao, Y., Klein, A. P., Edil, B. H., Shi, C., Bettegowda, C., Rodriguez, F. J., Eberhart, C. G., Hebbar, S., Offerhaus, G. J., McLendon, R., Rasheed, B. A., He, Y., Yan, H., Bigner, D. D., Oba-Shinjo, S. M., Marie, S. K., Riggins, G. J., Kinzler, K. W., Vogelstein, B., Hruban, R. H., Maitra, A., Papadopoulos, N., and Meeker, A. K. (2011) Altered telomeres in tumors with ATRX and DAXX mutations. Science 333, 425
-
(2011)
Science
, vol.333
, pp. 425
-
-
Heaphy, C.M.1
De Wilde, R.F.2
Jiao, Y.3
Klein, A.P.4
Edil, B.H.5
Shi, C.6
Bettegowda, C.7
Rodriguez, F.J.8
Eberhart, C.G.9
Hebbar, S.10
Offerhaus, G.J.11
McLendon, R.12
Rasheed, B.A.13
He, Y.14
Yan, H.15
Bigner, D.D.16
Oba-Shinjo, S.M.17
Marie, S.K.18
Riggins, G.J.19
Kinzler, K.W.20
Vogelstein, B.21
Hruban, R.H.22
Maitra, A.23
Papadopoulos, N.24
Meeker, A.K.25
more..
-
28
-
-
84864619205
-
Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway
-
Lovejoy, C. A., Li, W., Reisenweber, S., Thongthip, S., Bruno, J., de Lange, T., De, S., Petrini, J. H., Sung, P. A., Jasin, M., Rosenbluh, J., Zwang, Y., Weir, B. A., Hatton, C., Ivanova, E., Macconaill, L., Hanna, M., Hahn, W. C., Lue, N. F., Reddel, R. R., Jiao, Y., Kinzler, K., Vogelstein, B., Papadopoulos, N., and Meeker, A. K. (2012) Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway. PLoS Genet. 8, e1002772
-
(2012)
PLoS Genet
, vol.8
-
-
Lovejoy, C.A.1
Li, W.2
Reisenweber, S.3
Thongthip, S.4
Bruno, J.5
De Lange, T.6
De, S.7
Petrini, J.H.8
Sung, P.A.9
Jasin, M.10
Rosenbluh, J.11
Zwang, Y.12
Weir, B.A.13
Hatton, C.14
Ivanova, E.15
MacConaill, L.16
Hanna, M.17
Hahn, W.C.18
Lue, N.F.19
Reddel, R.R.20
Jiao, Y.21
Kinzler, K.22
Vogelstein, B.23
Papadopoulos, N.24
Meeker, A.K.25
more..
-
29
-
-
84869860972
-
Loss of wild-type ATRX expression in somatic cell hybrids segregates with activation of alternative lengthening of telomeres
-
Bower, K., Napier, C. E., Cole, S. L., Dagg, R. A., Lau, L. M., Duncan, E. L., Moy, E. L., and Reddel, R. R. (2012) Loss of wild-type ATRX expression in somatic cell hybrids segregates with activation of alternative lengthening of telomeres. PLoS One 7, e50062
-
(2012)
PLoS One
, vol.7
-
-
Bower, K.1
Napier, C.E.2
Cole, S.L.3
Dagg, R.A.4
Lau, L.M.5
Duncan, E.L.6
Moy, E.L.7
Reddel, R.R.8
-
30
-
-
77956409475
-
Heterochromatin formation in the mouse embryo requires critical residues of the histone variant H3.3
-
Santenard, A., Ziegler-Birling, C., Koch, M., Tora, L., Bannister, A. J., and Torres-Padilla, M. E. (2010) Heterochromatin formation in the mouse embryo requires critical residues of the histone variant H3.3. Nat. Cell Biol. 12, 853-862
-
(2010)
Nat. Cell Biol
, vol.12
, pp. 853-862
-
-
Santenard, A.1
Ziegler-Birling, C.2
Koch, M.3
Tora, L.4
Bannister, A.J.5
Torres-Padilla, M.E.6
-
31
-
-
84862777348
-
Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma
-
Schwartzentruber, J., Korshunov, A., Liu, X. Y., Jones, D. T., Pfaff, E., Jacob, K., Sturm, D., Fontebasso, A. M., Quang, D. A., Tönjes, M., Hovestadt, V., Albrecht, S., Kool, M., Nantel, A., Konermann, C., Lindroth, A., Jäger, N., Rausch, T., Ryzhova, M., Korbel, J. O., Hielscher, T., Hauser, P., Garami, M., Klekner, A., Bognar, L., Ebinger, M., Schuhmann, M. U., Scheurlen, W., Pekrun, A., Frühwald, M. C., Roggendorf, W., Kramm, C., Dürken, M., Atkinson, J., Lepage, P., Montpetit, A., Zakrzewska, M., Zakrzewski, K., Liberski, P. P., Dong, Z., Siegel, P., Kulozik, A. E., Zapatka, M., Guha, A., Malkin, D., Felsberg, J., Reifenberger, G., von Deimling, A., Ichimura, K., Collins, V. P., Witt, H., Milde, T., Witt, O., Zhang, C., Castelo-Branco, P., Lichter, P., Faury, D., Tabori, U., Plass, C., Majewski, J., Pfister, S. M., and Jabado, N. (2012) Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma. Nature 482, 226-231
-
(2012)
Nature
, vol.482
, pp. 226-231
-
-
Schwartzentruber, J.1
Korshunov, A.2
Liu, X.Y.3
Jones, D.T.4
Pfaff, E.5
Jacob, K.6
Sturm, D.7
Fontebasso, A.M.8
Quang, D.A.9
Tönjes, M.10
Hovestadt, V.11
Albrecht, S.12
Kool, M.13
Nantel, A.14
Konermann, C.15
Lindroth, A.16
Jäger, N.17
Rausch, T.18
Ryzhova, M.19
Korbel, J.O.20
Hielscher, T.21
Hauser, P.22
Garami, M.23
Klekner, A.24
Bognar, L.25
Ebinger, M.26
Schuhmann, M.U.27
Scheurlen, W.28
Pekrun, A.29
Frühwald, M.C.30
Roggendorf, W.31
Kramm, C.32
Dürken, M.33
Atkinson, J.34
Lepage, P.35
Montpetit, A.36
Zakrzewska, M.37
Zakrzewski, K.38
Liberski, P.P.39
Dong, Z.40
Siegel, P.41
Kulozik, A.E.42
Zapatka, M.43
Guha, A.44
Malkin, D.45
Felsberg, J.46
Reifenberger, G.47
Von Deimling, A.48
Ichimura, K.49
Collins, V.P.50
Witt, H.51
Milde, T.52
Witt, O.53
Zhang, C.54
Castelo-Branco, P.55
Lichter, P.56
Faury, D.57
Tabori, U.58
Plass, C.59
Majewski, J.60
Pfister, S.M.61
Jabado, N.62
more..
-
32
-
-
84862777410
-
Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas
-
Wu, G., Broniscer, A., McEachron, T. A., Lu, C., Paugh, B. S., Becksfort, J., Qu, C., Ding, L., Huether, R., Parker, M., Zhang, J., Gajjar, A., Dyer, M. A., Mullighan, C. G., Gilbertson, R. J., Mardis, E. R., Wilson, R. K., Downing, J. R., Ellison, D. W., Zhang, J., and Baker, S. J. (2012) Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas. Nat. Genet. 44, 251-253
-
(2012)
Nat. Genet
, vol.44
, pp. 251-253
-
-
Wu, G.1
Broniscer, A.2
McEachron, T.A.3
Lu, C.4
Paugh, B.S.5
Becksfort, J.6
Qu, C.7
Ding, L.8
Huether, R.9
Parker, M.10
Zhang, J.11
Gajjar, A.12
Dyer, M.A.13
Mullighan, C.G.14
Gilbertson, R.J.15
Mardis, E.R.16
Wilson, R.K.17
Downing, J.R.18
Ellison, D.W.19
Zhang, J.20
Baker, S.J.21
more..
-
33
-
-
12144289862
-
From silencing to gene expression. Real-time analysis in single cells
-
Janicki, S. M., Tsukamoto, T., Salghetti, S. E., Tansey, W. P., Sachidanandam, R., Prasanth, K. V., Ried, T., Shav-Tal, Y., Bertrand, E., Singer, R. H., and Spector, D. L. (2004) From silencing to gene expression. Real-time analysis in single cells. Cell 116, 683-698
-
(2004)
Cell
, vol.116
, pp. 683-698
-
-
Janicki, S.M.1
Tsukamoto, T.2
Salghetti, S.E.3
Tansey, W.P.4
Sachidanandam, R.5
Prasanth, K.V.6
Ried, T.7
Shav-Tal, Y.8
Bertrand, E.9
Singer, R.H.10
Spector, D.L.11
-
34
-
-
77956315085
-
Single cell analysis of transcriptional activation dynamics
-
Rafalska-Metcalf, I. U., Powers, S. L., Joo, L. M., LeRoy, G., and Janicki, S. M. (2010) Single cell analysis of transcriptional activation dynamics. PLoS One 5, e10272
-
(2010)
PLoS One
, vol.5
-
-
Rafalska-Metcalf, I.U.1
Powers, S.L.2
Joo, L.M.3
Leroy, G.4
Janicki, S.M.5
-
35
-
-
0037058948
-
Histone H3 variants specify modes of chromatin assembly
-
Ahmad, K., and Henikoff, S. (2002) Histone H3 variants specify modes of chromatin assembly. Proc. Natl. Acad. Sci. U.S.A. 99, 16477-16484
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 16477-16484
-
-
Ahmad, K.1
Henikoff, S.2
-
36
-
-
0035811009
-
RNA editing activity is associated with splicing factors in lnRNP particles. The nuclear pre-mRNA processing machinery
-
Raitskin, O., Cho, D. S., Sperling, J., Nishikura, K., and Sperling, R. (2001) RNA editing activity is associated with splicing factors in lnRNP particles. The nuclear pre-mRNA processing machinery. Proc. Natl. Acad. Sci. U.S.A. 98, 6571-6576
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 6571-6576
-
-
Raitskin, O.1
Cho, D.S.2
Sperling, J.3
Nishikura, K.4
Sperling, R.5
-
37
-
-
84877124213
-
Sp100A promotes chromatin decondensation at a CMV-promoter regulated transcription site
-
Newhart, A., Negorev, D. G., Rafalska-Metcalf, I. U., Yang, T., Maul, G. G., and Janicki, S. M. (2013) Sp100A promotes chromatin decondensation at a CMV-promoter regulated transcription site. Mol. Biol. Cell 24, 1454-1468
-
(2013)
Mol. Biol. Cell
, vol.24
, pp. 1454-1468
-
-
Newhart, A.1
Negorev, D.G.2
Rafalska-Metcalf, I.U.3
Yang, T.4
Maul, G.G.5
Janicki, S.M.6
-
38
-
-
0037286446
-
Visualization of single molecules of mRNA in situ
-
Femino, A. M., Fogarty, K., Lifshitz, L. M., Carrington, W., and Singer, R. H. (2003) Visualization of single molecules of mRNA in situ. Methods Enzymol. 361, 245-304
-
(2003)
Methods Enzymol
, vol.361
, pp. 245-304
-
-
Femino, A.M.1
Fogarty, K.2
Lifshitz, L.M.3
Carrington, W.4
Singer, R.H.5
-
39
-
-
33947236204
-
Molecular dissection of formation of senescence-associated heterochromatin foci
-
Zhang, R., Chen, W., and Adams, P. D. (2007) Molecular dissection of formation of senescence-associated heterochromatin foci. Mol. Cell Biol. 27, 2343-2358
-
(2007)
Mol. Cell Biol
, vol.27
, pp. 2343-2358
-
-
Zhang, R.1
Chen, W.2
Adams, P.D.3
-
40
-
-
40149085109
-
Replication of ICP0-null mutant herpes simplex virus type 1 is restricted by both PML and Sp100
-
Everett, R. D., Parada, C., Gripon, P., Sirma, H., and Orr, A. (2008) Replication of ICP0-null mutant herpes simplex virus type 1 is restricted by both PML and Sp100. J. Virol. 82, 2661-2672
-
(2008)
J. Virol
, vol.82
, pp. 2661-2672
-
-
Everett, R.D.1
Parada, C.2
Gripon, P.3
Sirma, H.4
Orr, A.5
-
41
-
-
0023832687
-
Cell cycle expression of RNA duplex unwindase activity in mammalian cells
-
Wagner, R. W., and Nishikura, K. (1988) Cell cycle expression of RNA duplex unwindase activity in mammalian cells. Mol. Cell Biol. 8, 770-777
-
(1988)
Mol. Cell Biol
, vol.8
, pp. 770-777
-
-
Wagner, R.W.1
Nishikura, K.2
-
42
-
-
77950515413
-
Regulation of ICP0-null mutant herpes simplex virus type 1 infection by ND10 components ATRX and hDaxx
-
Lukashchuk, V., and Everett, R. D. (2010) Regulation of ICP0-null mutant herpes simplex virus type 1 infection by ND10 components ATRX and hDaxx. J. Virol. 84, 4026-4040
-
(2010)
J. Virol
, vol.84
, pp. 4026-4040
-
-
Lukashchuk, V.1
Everett, R.D.2
-
43
-
-
55549113874
-
A quantitative model of transcription factor-activated gene expression
-
Kim, H. D., and O'Shea, E. K. (2008) A quantitative model of transcription factor-activated gene expression. Nat. Struct. Mol. Biol. 15, 1192-1198
-
(2008)
Nat. Struct. Mol. Biol
, vol.15
, pp. 1192-1198
-
-
Kim, H.D.1
O'Shea, E.K.2
-
44
-
-
77951916659
-
Antiviral response dictated by choreographed cascade of transcription factors
-
Zaslavsky, E., Hershberg, U., Seto, J., Pham, A. M., Marquez, S., Duke, J. L., Wetmur, J. G., Tenoever, B. R., Sealfon, S. C., and Kleinstein, S. H. (2010) Antiviral response dictated by choreographed cascade of transcription factors. J. Immunol. 184, 2908-2917
-
(2010)
J. Immunol
, vol.184
, pp. 2908-2917
-
-
Zaslavsky, E.1
Hershberg, U.2
Seto, J.3
Pham, A.M.4
Marquez, S.5
Duke, J.L.6
Wetmur, J.G.7
Tenoever, B.R.8
Sealfon, S.C.9
Kleinstein, S.H.10
-
45
-
-
15744394192
-
Transcriptional regulation by the numbers
-
Bintu, L., Buchler, N. E., Garcia, H. G., Gerland, U., Hwa, T., Kondev, J., and Phillips, R. (2005) Transcriptional regulation by the numbers. Models. Curr. Opin. Genet. Dev. 15, 116-124
-
(2005)
Models. Curr. Opin. Genet. Dev
, vol.15
, pp. 116-124
-
-
Bintu, L.1
Buchler, N.E.2
Garcia, H.G.3
Gerland, U.4
Hwa, T.5
Kondev, J.6
Phillips, R.7
-
46
-
-
78651107675
-
Nucleosome-mediated cooperativity between transcription factors
-
Mirny, L. A. (2010) Nucleosome-mediated cooperativity between transcription factors. Proc. Natl. Acad. Sci. U.S.A. 107, 22534-22539
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 22534-22539
-
-
Mirny, L.A.1
-
47
-
-
0029875865
-
A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sites
-
Polach, K. J., and Widom, J. (1996) A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sites. J. Mol. Biol. 258, 800-812
-
(1996)
J. Mol. Biol
, vol.258
, pp. 800-812
-
-
Polach, K.J.1
Widom, J.2
-
48
-
-
0024562757
-
How RNA polymerase II terminates transcription in higher eukaryotes
-
Proudfoot, N. J. (1989) How RNA polymerase II terminates transcription in higher eukaryotes. Trends Biochem. Sci. 14, 105-110
-
(1989)
Trends Biochem. Sci
, vol.14
, pp. 105-110
-
-
Proudfoot, N.J.1
-
49
-
-
0022003636
-
Transcription unit of the rabbit β1 globin gene
-
Rohrbaugh, M. L., Johnson, J. E., 3rd, James, M. D., and Hardison, R. C. (1985) Transcription unit of the rabbit β1 globin gene. Mol. Cell Biol. 5, 147-160
-
(1985)
Mol. Cell Biol
, vol.5
, pp. 147-160
-
-
Rohrbaugh, M.L.1
Johnson Iii, J.E.2
James, M.D.3
Hardison, R.C.4
-
50
-
-
80052408033
-
HIRA and Daxx constitute two independent histone H3.3-containing predeposition complexes
-
Elsaesser, S. J., and Allis, C. D. (2010) HIRA and Daxx constitute two independent histone H3.3-containing predeposition complexes. Cold Spring Harb. Symp. Quant. Biol. 75, 27-34
-
(2010)
Cold Spring Harb. Symp. Quant. Biol
, vol.75
, pp. 27-34
-
-
Elsaesser, S.J.1
Allis, C.D.2
-
51
-
-
77952306453
-
Using soft x-rays for a detailed picture of divalent metal binding in the nucleosome
-
Wu, B., and Davey, C. A. (2010) Using soft x-rays for a detailed picture of divalent metal binding in the nucleosome. J. Mol. Biol. 398, 633-640
-
(2010)
J. Mol. Biol
, vol.398
, pp. 633-640
-
-
Wu, B.1
Davey, C.A.2
-
52
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 Å resolution
-
Luger, K., Mäder, A. W., Richmond, R. K., Sargent, D. F., and Richmond, T. J. (1997) Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature 389, 251-260
-
(1997)
Nature
, vol.389
, pp. 251-260
-
-
Luger, K.1
Mäder, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
53
-
-
84867897054
-
HIRA dependent H3.3 deposition is required for transcriptional reprogramming following nuclear transfer to Xenopus oocytes
-
Jullien, J., Astrand, C., Szenker, E., Garrett, N., Almouzni, G., and Gurdon, J. B. (2012) HIRA dependent H3.3 deposition is required for transcriptional reprogramming following nuclear transfer to Xenopus oocytes. Epigenetics Chromatin 5, 17
-
(2012)
Epigenetics Chromatin
, vol.5
, pp. 17
-
-
Jullien, J.1
Astrand, C.2
Szenker, E.3
Garrett, N.4
Almouzni, G.5
Gurdon, J.B.6
-
54
-
-
37749051130
-
Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription
-
Ng, R. K., and Gurdon, J. B. (2008) Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription. Nat. Cell Biol. 10, 102-109
-
(2008)
Nat. Cell Biol
, vol.10
, pp. 102-109
-
-
Ng, R.K.1
Gurdon, J.B.2
-
55
-
-
33749599697
-
Deposition and function of histone H3 variants in Tetrahymena thermophila
-
Cui, B., Liu, Y., and Gorovsky, M. A. (2006) Deposition and function of histone H3 variants in Tetrahymena thermophila. Mol. Cell Biol. 26, 7719-7730
-
(2006)
Mol. Cell Biol
, vol.26
, pp. 7719-7730
-
-
Cui, B.1
Liu, Y.2
Gorovsky, M.A.3
-
56
-
-
71849103121
-
Transcriptional and developmental functions of the H3.3 histone variant in Drosophila
-
Sakai, A., Schwartz, B. E., Goldstein, S., and Ahmad, K. (2009) Transcriptional and developmental functions of the H3.3 histone variant in Drosophila. Curr. Biol. 19, 1816-1820
-
(2009)
Curr. Biol
, vol.19
, pp. 1816-1820
-
-
Sakai, A.1
Schwartz, B.E.2
Goldstein, S.3
Ahmad, K.4
-
57
-
-
33846590537
-
Chromosome-wide nucleosome replacement and H3.3 incorporation during mammalian meiotic sex chromosome inactivation
-
van der Heijden, G. W., Derijck, A. A., Pósfai, E., Giele, M., Pelczar, P., Ramos, L., Wansink, D. G., van der Vlag, J., Peters, A. H., and de Boer, P. (2007) Chromosome-wide nucleosome replacement and H3.3 incorporation during mammalian meiotic sex chromosome inactivation. Nat. Genet. 39, 251-258
-
(2007)
Nat. Genet
, vol.39
, pp. 251-258
-
-
Van Der Heijden, G.W.1
Derijck, A.A.2
Pósfai, E.3
Giele, M.4
Pelczar, P.5
Ramos, L.6
Wansink, D.G.7
Van Der Vlag, J.8
Peters, A.H.9
De Boer, P.10
-
58
-
-
33744923452
-
Dynamic distribution of the replacement histone variant H3.3 in the mouse oocyte and preimplantation embryos
-
Torres-Padilla, M. E., Bannister, A. J., Hurd, P. J., Kouzarides, T., and Zernicka-Goetz, M. (2006) Dynamic distribution of the replacement histone variant H3.3 in the mouse oocyte and preimplantation embryos. Int. J. Dev. Biol. 50, 455-461
-
(2006)
Int. J. Dev. Biol
, vol.50
, pp. 455-461
-
-
Torres-Padilla, M.E.1
Bannister, A.J.2
Hurd, P.J.3
Kouzarides, T.4
Zernicka-Goetz, M.5
-
59
-
-
70349303348
-
The secret message of heterochromatin. New insights into the mechanisms and function of centromeric and pericentric repeat sequence transcription
-
Eymery, A., Callanan, M., and Vourc'h, C. (2009) The secret message of heterochromatin. New insights into the mechanisms and function of centromeric and pericentric repeat sequence transcription. Int. J. Dev. Biol. 53, 259-268
-
(2009)
Int. J. Dev. Biol
, vol.53
, pp. 259-268
-
-
Eymery, A.1
Callanan, M.2
Vourc'H, C.3
-
60
-
-
0036509836
-
Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component
-
Maison, C., Bailly, D., Peters, A. H., Quivy, J. P., Roche, D., Taddei, A., Lachner, M., Jenuwein, T., and Almouzni, G. (2002) Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component. Nat. Genet. 30, 329-334
-
(2002)
Nat. Genet
, vol.30
, pp. 329-334
-
-
Maison, C.1
Bailly, D.2
Peters, A.H.3
Quivy, J.P.4
Roche, D.5
Taddei, A.6
Lachner, M.7
Jenuwein, T.8
Almouzni, G.9
-
61
-
-
0036775704
-
Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1
-
Muchardt, C., Guilleme, M., Seeler, J. S., Trouche, D., Dejean, A., and Yaniv, M. (2002) Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1. EMBO Rep. 3, 975-981
-
(2002)
EMBO Rep
, vol.3
, pp. 975-981
-
-
Muchardt, C.1
Guilleme, M.2
Seeler, J.S.3
Trouche, D.4
Dejean, A.5
Yaniv, M.6
-
62
-
-
34249304470
-
Transcription andRNAinterference in the formation of heterochromatin
-
Grewal, S. I., and Elgin, S. C. (2007) Transcription andRNAinterference in the formation of heterochromatin. Nature 447, 399-406
-
(2007)
Nature
, vol.447
, pp. 399-406
-
-
Grewal, S.I.1
Elgin, S.C.2
-
63
-
-
0013801134
-
Histone-bound RNA, a component of native nucleohistone
-
Huang, R. C., and Bonner, J. (1965) Histone-bound RNA, a component of native nucleohistone. Proc. Natl. Acad. Sci. U.S.A. 54, 960-967
-
(1965)
Proc. Natl. Acad. Sci. U.S.A.
, vol.54
, pp. 960-967
-
-
Huang, R.C.1
Bonner, J.2
-
64
-
-
0019890073
-
Ribonucleic acid and other polyanions facilitate chromatin assembly in vitro
-
Nelson, T., Wiegand, R., and Brutlag, D. (1981) Ribonucleic acid and other polyanions facilitate chromatin assembly in vitro. Biochemistry 20, 2594-2601
-
(1981)
Biochemistry
, vol.20
, pp. 2594-2601
-
-
Nelson, T.1
Wiegand, R.2
Brutlag, D.3
-
65
-
-
49449118512
-
A comprehensive library of histone mutants identifies nucleosomal residues required for H3K4 methylation
-
Nakanishi, S., Sanderson, B. W., Delventhal, K. M., Bradford, W. D., Staehling-Hampton, K., and Shilatifard, A. (2008) A comprehensive library of histone mutants identifies nucleosomal residues required for H3K4 methylation. Nat. Struct. Mol. Biol. 15, 881-888
-
(2008)
Nat. Struct. Mol. Biol
, vol.15
, pp. 881-888
-
-
Nakanishi, S.1
Sanderson, B.W.2
Delventhal, K.M.3
Bradford, W.D.4
Staehling-Hampton, K.5
Shilatifard, A.6
-
66
-
-
77955893526
-
Systematic screen reveals new functional dynamics of histones H3 and H4 during gametogenesis
-
Govin, J., Dorsey, J., Gaucher, J., Rousseaux, S., Khochbin, S., and Berger, S. L. (2010) Systematic screen reveals new functional dynamics of histones H3 and H4 during gametogenesis. Genes Dev. 24, 1772-1786
-
(2010)
Genes Dev
, vol.24
, pp. 1772-1786
-
-
Govin, J.1
Dorsey, J.2
Gaucher, J.3
Rousseaux, S.4
Khochbin, S.5
Berger, S.L.6
-
67
-
-
84877785024
-
Iehibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma
-
Lewis, P. W.,Müller, M. M., Koletsky, M. S., Cordero, F., Lin, S., Banaszynski, L. A., Garcia, B. A., Muir, T. W., Becher, O. J., and Allis, C. D. (2013) Inhibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma. Science 340, 857-861
-
(2013)
Science
, vol.340
, pp. 857-861
-
-
Lewis, P.W.1
Müller, M.M.2
Koletsky, M.S.3
Cordero, F.4
Lin, S.5
Banaszynski, L.A.6
Garcia, B.A.7
Muir, T.W.8
Becher, O.J.9
Allis, C.D.10
-
68
-
-
84877299145
-
The histone H3.3K27M mutation in pediatric glioma reprograms H3K27 methylation and gene expression
-
Chan, K. M., Fang, D., Gan, H., Hashizume, R., Yu, C., Schroeder, M., Gupta, N., Mueller, S., James, C. D., Jenkins, R., Sarkaria, J., and Zhang, Z. (2013) The histone H3.3K27M mutation in pediatric glioma reprograms H3K27 methylation and gene expression. Genes Dev. 27, 985-990
-
(2013)
Genes Dev
, vol.27
, pp. 985-990
-
-
Chan, K.M.1
Fang, D.2
Gan, H.3
Hashizume, R.4
Yu, C.5
Schroeder, M.6
Gupta, N.7
Mueller, S.8
James, C.D.9
Jenkins, R.10
Sarkaria, J.11
Zhang, Z.12
-
69
-
-
34250160256
-
RNA maps reveal new RNA classes and a possible function for pervasive transcription
-
Kapranov, P., Cheng, J., Dike, S., Nix, D. A., Duttagupta, R., Willingham, A. T., Stadler, P. F., Hertel, J., Hackermüller, J., Hofacker, I. L., Bell, I., Cheung, E., Drenkow, J., Dumais, E., Patel, S., Helt, G., Ganesh, M., Ghosh, S., Piccolboni, A., Sementchenko, V., Tammana, H., and Gingeras, T. R. (2007) RNA maps reveal new RNA classes and a possible function for pervasive transcription. Science 316, 1484-1488
-
(2007)
Science
, vol.316
, pp. 1484-1488
-
-
Kapranov, P.1
Cheng, J.2
Dike, S.3
Nix, D.A.4
Duttagupta, R.5
Willingham, A.T.6
Stadler, P.F.7
Hertel, J.8
Hackermüller, J.9
Hofacker, I.L.10
Bell, I.11
Cheung, E.12
Drenkow, J.13
Dumais, E.14
Patel, S.15
Helt, G.16
Ganesh, M.17
Ghosh, S.18
Piccolboni, A.19
Sementchenko, V.20
Tammana, H.21
Gingeras, T.R.22
more..
-
70
-
-
57849105533
-
The antisense transcriptomes of human cells
-
He, Y., Vogelstein, B., Velculescu, V. E., Papadopoulos, N., and Kinzler, K. W. (2008) The antisense transcriptomes of human cells. Science 322, 1855-1857
-
(2008)
Science
, vol.322
, pp. 1855-1857
-
-
He, Y.1
Vogelstein, B.2
Velculescu, V.E.3
Papadopoulos, N.4
Kinzler, K.W.5
-
71
-
-
77955140071
-
New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism
-
Kapranov, P., Ozsolak, F., Kim, S. W., Foissac, S., Lipson, D., Hart, C., Roels, S., Borel, C., Antonarakis, S. E., Monaghan, A. P., John, B., and Milos, P. M. (2010) New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism. Nature 466, 642-646
-
(2010)
Nature
, vol.466
, pp. 642-646
-
-
Kapranov, P.1
Ozsolak, F.2
Kim, S.W.3
Foissac, S.4
Lipson, D.5
Hart, C.6
Roels, S.7
Borel, C.8
Antonarakis, S.E.9
Monaghan, A.P.10
John, B.11
Milos, P.M.12
-
72
-
-
60549115605
-
Post-transcriptional processing generates a diversity of 5-modified long and short RNAs
-
Affymetrix ENCODE Transcriptome Project, Cold Spring Harbor Laboratory ENCODE Transcriptome Project
-
Affymetrix ENCODE Transcriptome Project, Cold Spring Harbor Laboratory ENCODE Transcriptome Project (2009) Post-transcriptional processing generates a diversity of 5-modified long and short RNAs. Nature 457, 1028-1032
-
(2009)
Nature
, vol.457
, pp. 1028-1032
-
-
-
73
-
-
84866497062
-
Set2 methylation of histone H3 lysine 36 suppresses histone exchange on transcribed genes
-
Venkatesh, S., Smolle, M., Li, H., Gogol, M. M., Saint, M., Kumar, S., Natarajan, K., and Workman, J. L. (2012) Set2 methylation of histone H3 lysine 36 suppresses histone exchange on transcribed genes. Nature 489, 452-455
-
(2012)
Nature
, vol.489
, pp. 452-455
-
-
Venkatesh, S.1
Smolle, M.2
Li, H.3
Gogol, M.M.4
Saint, M.5
Kumar, S.6
Natarajan, K.7
Workman, J.L.8
-
74
-
-
76749150088
-
Asf1 can promote trimethylation of H3 K36 by Set2
-
Lin, L. J., Minard, L. V., Johnston, G. C., Singer, R. A., and Schultz, M. C. (2010) Asf1 can promote trimethylation of H3 K36 by Set2. Mol. Cell Biol. 30, 1116-1129
-
(2010)
Mol. Cell Biol
, vol.30
, pp. 1116-1129
-
-
Lin, L.J.1
Minard, L.V.2
Johnston, G.C.3
Singer, R.A.4
Schultz, M.C.5
-
75
-
-
27744577727
-
Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription
-
Carrozza, M. J., Li, B., Florens, L., Suganuma, T., Swanson, S. K., Lee, K. K., Shia, W. J., Anderson, S., Yates, J., Washburn, M. P., and Workman, J. L. (2005) Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription. Cell 123, 581-592
-
(2005)
Cell
, vol.123
, pp. 581-592
-
-
Carrozza, M.J.1
Li, B.2
Florens, L.3
Suganuma, T.4
Swanson, S.K.5
Lee, K.K.6
Shia, W.J.7
Anderson, S.8
Yates, J.9
Washburn, M.P.10
Workman, J.L.11
-
76
-
-
80455176844
-
RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II
-
Zaratiegui, M., Castel, S. E., Irvine, D. V., Kloc, A., Ren, J., Li, F., de Castro, E., Marín, L., Chang, A. Y., Goto, D., Cande, W. Z., Antequera, F., Arcangioli, B., and Martienssen, R. A. (2011) RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II. Nature 479, 135-138
-
(2011)
Nature
, vol.479
, pp. 135-138
-
-
Zaratiegui, M.1
Castel, S.E.2
Irvine, D.V.3
Kloc, A.4
Ren, J.5
Li, F.6
De Castro, E.7
Marín, L.8
Chang, A.Y.9
Goto, D.10
Cande, W.Z.11
Antequera, F.12
Arcangioli, B.13
Martienssen, R.A.14
-
77
-
-
78049386911
-
Molecular dissection of telomeric repeat-containing RNA biogenesis unveils the presence of distinct and multiple regulatory pathways
-
Porro, A., Feuerhahn, S., Reichenbach, P., and Lingner, J. (2010) Molecular dissection of telomeric repeat-containing RNA biogenesis unveils the presence of distinct and multiple regulatory pathways. Mol. Cell Biol. 30, 4808-4817
-
(2010)
Mol. Cell Biol
, vol.30
, pp. 4808-4817
-
-
Porro, A.1
Feuerhahn, S.2
Reichenbach, P.3
Lingner, J.4
-
78
-
-
55949106494
-
The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containingRNAand promotes telomere elongation in Saccharomyces cerevisiae
-
Luke, B., Panza, A., Redon, S., Iglesias, N., Li, Z., and Lingner, J. (2008) The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containingRNAand promotes telomere elongation in Saccharomyces cerevisiae. Mol. Cell 32, 465-477
-
(2008)
Mol. Cell
, vol.32
, pp. 465-477
-
-
Luke, B.1
Panza, A.2
Redon, S.3
Iglesias, N.4
Li, Z.5
Lingner, J.6
-
79
-
-
33846527241
-
Distinct populations of primary and secondary effectors during RNAi in C elegans
-
Pak, J., and Fire, A. (2007) Distinct populations of primary and secondary effectors during RNAi in C. elegans. Science 315, 241-244
-
(2007)
Science
, vol.315
, pp. 241-244
-
-
Pak, J.1
Fire, A.2
-
80
-
-
69549127823
-
Evolution of the RNA-dependent RNA polymerase (RdRP) genes. Duplications and possible losses before and after the divergence of major eukaryotic groups
-
Zong, J., Yao, X., Yin, J., Zhang, D., and Ma, H. (2009) Evolution of the RNA-dependent RNA polymerase (RdRP) genes. Duplications and possible losses before and after the divergence of major eukaryotic groups. Gene 447, 29-39
-
(2009)
Gene
, vol.447
, pp. 29-39
-
-
Zong, J.1
Yao, X.2
Yin, J.3
Zhang, D.4
Ma, H.5
-
81
-
-
33744805985
-
Genome-wide analysis of mammalian promoter architecture and evolution
-
Carninci, P., Sandelin, A., Lenhard, B., Katayama, S., Shimokawa, K., Ponjavic, J., Semple, C. A., Taylor, M. S., Engström, P. G., Frith, M. C., Forrest, A. R., Alkema, W. B., Tan, S. L., Plessy, C., Kodzius, R., Ravasi, T., Kasukawa, T., Fukuda, S., Kanamori-Katayama, M., Kitazume, Y., Kawaji, H., Kai, C., Nakamura, M., Konno, H., Nakano, K., Mottagui-Tabar, S., Arner, P., Chesi, A., Gustincich, S., Persichetti, F., Suzuki, H., Grimmond, S. M., Wells, C. A., Orlando, V., Wahlestedt, C., Liu, E. T., Harbers, M., Kawai, J., Bajic, V. B., Hume, D. A., and Hayashizaki, Y. (2006) Genome-wide analysis of mammalian promoter architecture and evolution. Nat. Genet. 38, 626-635
-
(2006)
Nat. Genet
, vol.38
, pp. 626-635
-
-
Carninci, P.1
Sandelin, A.2
Lenhard, B.3
Katayama, S.4
Shimokawa, K.5
Ponjavic, J.6
Semple, C.A.7
Taylor, M.S.8
Engström, P.G.9
Frith, M.C.10
Forrest, A.R.11
Alkema, W.B.12
Tan, S.L.13
Plessy, C.14
Kodzius, R.15
Ravasi, T.16
Kasukawa, T.17
Fukuda, S.18
Kanamori-Katayama, M.19
Kitazume, Y.20
Kawaji, H.21
Kai, C.22
Nakamura, M.23
Konno, H.24
Nakano, K.25
Mottagui-Tabar, S.26
Arner, P.27
Chesi, A.28
Gustincich, S.29
Persichetti, F.30
Suzuki, H.31
Grimmond, S.M.32
Wells, C.A.33
Orlando, V.34
Wahlestedt, C.35
Liu, E.T.36
Harbers, M.37
Kawai, J.38
Bajic, V.B.39
Hume, D.A.40
Hayashizaki, Y.41
more..
-
82
-
-
70249114371
-
An RNA-dependent RNA polymerase formed by TERT and the RMRP RNA
-
Maida, Y., Yasukawa, M., Furuuchi, M., Lassmann, T., Possemato, R., Okamoto, N., Kasim, V., Hayashizaki, Y., Hahn, W. C., and Masutomi, K. (2009) An RNA-dependent RNA polymerase formed by TERT and the RMRP RNA. Nature 461, 230-235
-
(2009)
Nature
, vol.461
, pp. 230-235
-
-
Maida, Y.1
Yasukawa, M.2
Furuuchi, M.3
Lassmann, T.4
Possemato, R.5
Okamoto, N.6
Kasim, V.7
Hayashizaki, Y.8
Hahn, W.C.9
Masutomi, K.10
-
83
-
-
0346099349
-
Telomerase RNA accumulates in Cajal bodies in human cancer cells
-
Zhu, Y., Tomlinson, R. L., Lukowiak, A. A., Terns, R. M., and Terns, M. P. (2004) Telomerase RNA accumulates in Cajal bodies in human cancer cells. Mol. Biol. Cell 15, 81-90
-
(2004)
Mol. Biol. Cell
, vol.15
, pp. 81-90
-
-
Zhu, Y.1
Tomlinson, R.L.2
Lukowiak, A.A.3
Terns, R.M.4
Terns, M.P.5
-
84
-
-
0030697342
-
Evidence for an alternative mechanism for maintaining telomere length in human tumors and tumor-derived cell lines
-
Bryan, T. M., Englezou, A., Dalla-Pozza, L., Dunham, M. A., and Reddel, R. R. (1997) Evidence for an alternative mechanism for maintaining telomere length in human tumors and tumor-derived cell lines. Nat. Med. 3, 1271-1274
-
(1997)
Nat. Med
, vol.3
, pp. 1271-1274
-
-
Bryan, T.M.1
Englezou, A.2
Dalla-Pozza, L.3
Dunham, M.A.4
Reddel, R.R.5
-
85
-
-
77952236323
-
RNAi-dependent formation of heterochromatin and its diverse functions
-
Grewal, S. I. (2010) RNAi-dependent formation of heterochromatin and its diverse functions. Curr. Opin. Genet. Dev. 20, 134-141
-
(2010)
Curr. Opin. Genet. Dev
, vol.20
, pp. 134-141
-
-
Grewal, S.I.1
-
86
-
-
78650575533
-
Viral RNA silencing suppressors (RSS). Novel strategy of viruses to ablate the host RNA interference (RNAi) defense system
-
Bivalkar-Mehla, S., Vakharia, J., Mehla, R., Abreha, M., Kanwar, J. R., Tikoo, A., and Chauhan, A. (2011) Viral RNA silencing suppressors (RSS). Novel strategy of viruses to ablate the host RNA interference (RNAi) defense system. Virus Res. 155, 1-9
-
(2011)
Virus Res
, vol.155
, pp. 1-9
-
-
Bivalkar-Mehla, S.1
Vakharia, J.2
Mehla, R.3
Abreha, M.4
Kanwar, J.R.5
Tikoo, A.6
Chauhan, A.7
-
87
-
-
58249090017
-
The evolution of RNAi as a defence against viruses and transposable elements
-
Obbard, D. J., Gordon, K. H., Buck, A. H., and Jiggins, F. M. (2009) The evolution of RNAi as a defence against viruses and transposable elements. Philos. Trans. R. Soc. Lond. B Biol. Sci. 364, 99-115
-
(2009)
Philos. Trans. R. Soc. Lond. B Biol. Sci
, vol.364
, pp. 99-115
-
-
Obbard, D.J.1
Gordon, K.H.2
Buck, A.H.3
Jiggins, F.M.4
-
88
-
-
34249064319
-
RNA interference and innate immunity
-
Sioud, M. (2007) RNA interference and innate immunity. Adv. Drug Deliv. Rev. 59, 153-163
-
(2007)
Adv. Drug Deliv. Rev
, vol.59
, pp. 153-163
-
-
Sioud, M.1
-
89
-
-
78651471295
-
Role of promyelocytic leukemia protein in host antiviral defense
-
Geoffroy, M. C., and Chelbi-Alix, M. K. (2011) Role of promyelocytic leukemia protein in host antiviral defense. J. Interferon Cytokine Res. 31, 145-158
-
(2011)
J. Interferon Cytokine Res
, vol.31
, pp. 145-158
-
-
Geoffroy, M.C.1
Chelbi-Alix, M.K.2
-
90
-
-
84874628534
-
DAXXdependent supply of soluble (H3.3-H4) dimers into PML bodies pending deposition into chromatin
-
Delbarre, E., Ivanauskiene, K., Küntziger, T., and Collas, P. (2013) DAXXdependent supply of soluble (H3.3-H4) dimers into PML bodies pending deposition into chromatin. Genome Res. 23, 440-451
-
(2013)
Genome Res
, vol.23
, pp. 440-451
-
-
Delbarre, E.1
Ivanauskiene, K.2
Küntziger, T.3
Collas, P.4
|