-
1
-
-
0036299092
-
The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly
-
Ahmad K., and Henikoff S. The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly. Mol. Cell 9 (2002) 1191-1200
-
(2002)
Mol. Cell
, vol.9
, pp. 1191-1200
-
-
Ahmad, K.1
Henikoff, S.2
-
2
-
-
37349043972
-
Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends
-
Azzalin C.M., Reichenbach P., Khoriauli L., Giulotto E., and Lingner J. Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends. Science 318 (2007) 798-801
-
(2007)
Science
, vol.318
, pp. 798-801
-
-
Azzalin, C.M.1
Reichenbach, P.2
Khoriauli, L.3
Giulotto, E.4
Lingner, J.5
-
3
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A., Cuddapah S., Cui K., Roh T.Y., Schones D.E., Wang Z., Wei G., Chepelev I., and Zhao K. High-resolution profiling of histone methylations in the human genome. Cell 129 (2007) 823-837
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
4
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein B.E., Mikkelsen T.S., Xie X., Kamal M., Huebert D.J., Cuff J., Fry B., Meissner A., Wernig M., Plath K., et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 125 (2006) 315-326
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
-
6
-
-
35948990898
-
The essential role of Drosophila HIRA for de novo assembly of paternal chromatin at fertilization
-
Bonnefoy E., Orsi G.A., Couble P., and Loppin B. The essential role of Drosophila HIRA for de novo assembly of paternal chromatin at fertilization. PLoS Genet. 3 (2007) 1991-2006
-
(2007)
PLoS Genet.
, vol.3
, pp. 1991-2006
-
-
Bonnefoy, E.1
Orsi, G.A.2
Couble, P.3
Loppin, B.4
-
7
-
-
0036709213
-
Signalling, cell cycle and pluripotency in embryonic stem cells
-
Burdon T., Smith A., and Savatier P. Signalling, cell cycle and pluripotency in embryonic stem cells. Trends Cell Biol. 12 (2002) 432-438
-
(2002)
Trends Cell Biol.
, vol.12
, pp. 432-438
-
-
Burdon, T.1
Smith, A.2
Savatier, P.3
-
8
-
-
55549129245
-
Progress and prospects: zinc-finger nucleases as gene therapy agents
-
Carroll D. Progress and prospects: zinc-finger nucleases as gene therapy agents. Gene Ther. 15 (2008) 1463-1468
-
(2008)
Gene Ther.
, vol.15
, pp. 1463-1468
-
-
Carroll, D.1
-
9
-
-
44649117905
-
Integration of external signaling pathways with the core transcriptional network in embryonic stem cells
-
Chen X., Xu H., Yuan P., Fang F., Huss M., Vega V.B., Wong E., Orlov Y.L., Zhang W., Jiang J., et al. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133 (2008) 1106-1117
-
(2008)
Cell
, vol.133
, pp. 1106-1117
-
-
Chen, X.1
Xu, H.2
Yuan, P.3
Fang, F.4
Huss, M.5
Vega, V.B.6
Wong, E.7
Orlov, Y.L.8
Zhang, W.9
Jiang, J.10
-
10
-
-
46249103973
-
Stem cell transcriptome profiling via massive-scale mRNA sequencing
-
Cloonan N., Forrest A.R., Kolle G., Gardiner B.B., Faulkner G.J., Brown M.K., Taylor D.F., Steptoe A.L., Wani S., Bethel G., et al. Stem cell transcriptome profiling via massive-scale mRNA sequencing. Nat. Methods 5 (2008) 613-619
-
(2008)
Nat. Methods
, vol.5
, pp. 613-619
-
-
Cloonan, N.1
Forrest, A.R.2
Kolle, G.3
Gardiner, B.B.4
Faulkner, G.J.5
Brown, M.K.6
Taylor, D.F.7
Steptoe, A.L.8
Wani, S.9
Bethel, G.10
-
11
-
-
24944484633
-
Niche-independent symmetrical self-renewal of a mammalian tissue stem cell
-
Conti L., Pollard S.M., Gorba T., Reitano E., Toselli M., Biella G., Sun Y., Sanzone S., Ying Q.L., Cattaneo E., and Smith A. Niche-independent symmetrical self-renewal of a mammalian tissue stem cell. PLoS Biol. 3 (2005) e283
-
(2005)
PLoS Biol.
, vol.3
-
-
Conti, L.1
Pollard, S.M.2
Gorba, T.3
Reitano, E.4
Toselli, M.5
Biella, G.6
Sun, Y.7
Sanzone, S.8
Ying, Q.L.9
Cattaneo, E.10
Smith, A.11
-
12
-
-
55549148715
-
H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment
-
Creyghton M.P., Markoulaki S., Levine S.S., Hanna J., Lodato M.A., Sha K., Young R.A., Jaenisch R., and Boyer L.A. H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment. Cell 135 (2008) 649-661
-
(2008)
Cell
, vol.135
, pp. 649-661
-
-
Creyghton, M.P.1
Markoulaki, S.2
Levine, S.S.3
Hanna, J.4
Lodato, M.A.5
Sha, K.6
Young, R.A.7
Jaenisch, R.8
Boyer, L.A.9
-
14
-
-
33646200267
-
Histone H3.3 deposition at E2F-regulated genes is linked to transcription
-
Daury L., Chailleux C., Bonvallet J., and Trouche D. Histone H3.3 deposition at E2F-regulated genes is linked to transcription. EMBO Rep. 7 (2006) 66-71
-
(2006)
EMBO Rep.
, vol.7
, pp. 66-71
-
-
Daury, L.1
Chailleux, C.2
Bonvallet, J.3
Trouche, D.4
-
16
-
-
44949155482
-
Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases
-
Doyon Y., McCammon J.M., Miller J.C., Faraji F., Ngo C., Katibah G.E., Amora R., Hocking T.D., Zhang L., Rebar E.J., et al. Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases. Nat. Biotechnol. 26 (2008) 702-708
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 702-708
-
-
Doyon, Y.1
McCammon, J.M.2
Miller, J.C.3
Faraji, F.4
Ngo, C.5
Katibah, G.E.6
Amora, R.7
Hocking, T.D.8
Zhang, L.9
Rebar, E.J.10
-
17
-
-
33646473832
-
Loss of Atrx affects trophoblast development and the pattern of X-inactivation in extraembryonic tissues
-
Garrick D., Sharpe J.A., Arkell R., Dobbie L., Smith A.J., Wood W.G., Higgs D.R., and Gibbons R.J. Loss of Atrx affects trophoblast development and the pattern of X-inactivation in extraembryonic tissues. PLoS Genet. 2 (2006) e58
-
(2006)
PLoS Genet.
, vol.2
-
-
Garrick, D.1
Sharpe, J.A.2
Arkell, R.3
Dobbie, L.4
Smith, A.J.5
Wood, W.G.6
Higgs, D.R.7
Gibbons, R.J.8
-
18
-
-
68949164755
-
Chd1 regulates open chromatin and pluripotency of embryonic stem cells
-
Gaspar-Maia A., Alajem A., Polesso F., Sridharan R., Mason M.J., Heidersbach A., Ramalho-Santos J., McManus M.T., Plath K., Meshorer E., and Ramalho-Santos M. Chd1 regulates open chromatin and pluripotency of embryonic stem cells. Nature 460 (2009) 863-868
-
(2009)
Nature
, vol.460
, pp. 863-868
-
-
Gaspar-Maia, A.1
Alajem, A.2
Polesso, F.3
Sridharan, R.4
Mason, M.J.5
Heidersbach, A.6
Ramalho-Santos, J.7
McManus, M.T.8
Plath, K.9
Meshorer, E.10
Ramalho-Santos, M.11
-
19
-
-
44849092682
-
Mutations in the chromatin-associated protein ATRX
-
Gibbons R.J., Wada T., Fisher C.A., Malik N., Mitson M.J., Steensma D.P., Fryer A., Goudie D.R., Krantz I.D., and Traeger-Synodinos J. Mutations in the chromatin-associated protein ATRX. Hum. Mutat. 29 (2008) 796-802
-
(2008)
Hum. Mutat.
, vol.29
, pp. 796-802
-
-
Gibbons, R.J.1
Wada, T.2
Fisher, C.A.3
Malik, N.4
Mitson, M.J.5
Steensma, D.P.6
Fryer, A.7
Goudie, D.R.8
Krantz, I.D.9
Traeger-Synodinos, J.10
-
20
-
-
33847047461
-
Epigenetics: a landscape takes shape
-
Goldberg A.D., Allis C.D., and Bernstein E. Epigenetics: a landscape takes shape. Cell 128 (2007) 635-638
-
(2007)
Cell
, vol.128
, pp. 635-638
-
-
Goldberg, A.D.1
Allis, C.D.2
Bernstein, E.3
-
21
-
-
34447098370
-
A chromatin landmark and transcription initiation at most promoters in human cells
-
Guenther M.G., Levine S.S., Boyer L.A., Jaenisch R., and Young R.A. A chromatin landmark and transcription initiation at most promoters in human cells. Cell 130 (2007) 77-88
-
(2007)
Cell
, vol.130
, pp. 77-88
-
-
Guenther, M.G.1
Levine, S.S.2
Boyer, L.A.3
Jaenisch, R.4
Young, R.A.5
-
22
-
-
62249133709
-
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
-
Guttman M., Amit I., Garber M., French C., Lin M.F., Feldser D., Huarte M., Zuk O., Carey B.W., Cassady J.P., et al. Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals. Nature 458 (2009) 223-227
-
(2009)
Nature
, vol.458
, pp. 223-227
-
-
Guttman, M.1
Amit, I.2
Garber, M.3
French, C.4
Lin, M.F.5
Feldser, D.6
Huarte, M.7
Zuk, O.8
Carey, B.W.9
Cassady, J.P.10
-
23
-
-
33646239638
-
Histone H3 variants and their potential role in indexing mammalian genomes: the "H3 barcode hypothesis"
-
Hake S.B., and Allis C.D. Histone H3 variants and their potential role in indexing mammalian genomes: the "H3 barcode hypothesis". Proc. Natl. Acad. Sci. USA 103 (2006) 6428-6435
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 6428-6435
-
-
Hake, S.B.1
Allis, C.D.2
-
24
-
-
33644853355
-
Expression patterns and post-translational modifications associated with mammalian histone H3 variants
-
Hake S.B., Garcia B.A., Duncan E.M., Kauer M., Dellaire G., Shabanowitz J., Bazett-Jones D.P., Allis C.D., and Hunt D.F. Expression patterns and post-translational modifications associated with mammalian histone H3 variants. J. Biol. Chem. 281 (2006) 559-568
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 559-568
-
-
Hake, S.B.1
Garcia, B.A.2
Duncan, E.M.3
Kauer, M.4
Dellaire, G.5
Shabanowitz, J.6
Bazett-Jones, D.P.7
Allis, C.D.8
Hunt, D.F.9
-
25
-
-
33847334699
-
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
-
Heintzman N.D., Stuart R.K., Hon G., Fu Y., Ching C.W., Hawkins R.D., Barrera L.O., Van Calcar S., Qu C., Ching K.A., et al. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nat. Genet. 39 (2007) 311-318
-
(2007)
Nat. Genet.
, vol.39
, pp. 311-318
-
-
Heintzman, N.D.1
Stuart, R.K.2
Hon, G.3
Fu, Y.4
Ching, C.W.5
Hawkins, R.D.6
Barrera, L.O.7
Van Calcar, S.8
Qu, C.9
Ching, K.A.10
-
26
-
-
37249012276
-
Nucleosome destabilization in the epigenetic regulation of gene expression
-
Henikoff S. Nucleosome destabilization in the epigenetic regulation of gene expression. Nat. Rev. Genet. 9 (2008) 15-26
-
(2008)
Nat. Rev. Genet.
, vol.9
, pp. 15-26
-
-
Henikoff, S.1
-
27
-
-
61849170193
-
Genome-wide profiling of salt fractions maps physical properties of chromatin
-
Henikoff S., Henikoff J.G., Sakai A., Loeb G.B., and Ahmad K. Genome-wide profiling of salt fractions maps physical properties of chromatin. Genome Res. 19 (2009) 460-469
-
(2009)
Genome Res.
, vol.19
, pp. 460-469
-
-
Henikoff, S.1
Henikoff, J.G.2
Sakai, A.3
Loeb, G.B.4
Ahmad, K.5
-
28
-
-
67650960676
-
Transcription in the absence of histone H3.3
-
Hödl M., and Basler K. Transcription in the absence of histone H3.3. Curr. Biol. 19 (2009) 1221-1226
-
(2009)
Curr. Biol.
, vol.19
, pp. 1221-1226
-
-
Hödl, M.1
Basler, K.2
-
29
-
-
12144289862
-
From silencing to gene expression: real-time analysis in single cells
-
Janicki S.M., Tsukamoto T., Salghetti S.E., Tansey W.P., Sachidanandam R., Prasanth K.V., Ried T., Shav-Tal Y., Bertrand E., Singer R.H., and Spector D.L. From silencing to gene expression: real-time analysis in single cells. Cell 116 (2004) 683-698
-
(2004)
Cell
, vol.116
, pp. 683-698
-
-
Janicki, S.M.1
Tsukamoto, T.2
Salghetti, S.E.3
Tansey, W.P.4
Sachidanandam, R.5
Prasanth, K.V.6
Ried, T.7
Shav-Tal, Y.8
Bertrand, E.9
Singer, R.H.10
Spector, D.L.11
-
30
-
-
31444437043
-
Distribution of histone H3.3 in hematopoietic cell lineages
-
Jin C., and Felsenfeld G. Distribution of histone H3.3 in hematopoietic cell lineages. Proc. Natl. Acad. Sci. USA 103 (2006) 574-579
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 574-579
-
-
Jin, C.1
Felsenfeld, G.2
-
31
-
-
68149150830
-
H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions
-
Jin C., Zang C., Wei G., Cui K., Peng W., Zhao K., and Felsenfeld G. H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions. Nat. Genet. 41 (2009) 941-945
-
(2009)
Nat. Genet.
, vol.41
, pp. 941-945
-
-
Jin, C.1
Zang, C.2
Wei, G.3
Cui, K.4
Peng, W.5
Zhao, K.6
Felsenfeld, G.7
-
32
-
-
34548272156
-
CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo
-
Konev A.Y., Tribus M., Park S.Y., Podhraski V., Lim C.Y., Emelyanov A.V., Vershilova E., Pirrotta V., Kadonaga J.T., Lusser A., and Fyodorov D.V. CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo. Science 317 (2007) 1087-1090
-
(2007)
Science
, vol.317
, pp. 1087-1090
-
-
Konev, A.Y.1
Tribus, M.2
Park, S.Y.3
Podhraski, V.4
Lim, C.Y.5
Emelyanov, A.V.6
Vershilova, E.7
Pirrotta, V.8
Kadonaga, J.T.9
Lusser, A.10
Fyodorov, D.V.11
-
33
-
-
33845925394
-
Chromatin immunoprecipitation and microarray-based analysis of protein location
-
Lee T.I., Johnstone S.E., and Young R.A. Chromatin immunoprecipitation and microarray-based analysis of protein location. Nat. Protoc. 1 (2006) 729-748
-
(2006)
Nat. Protoc.
, vol.1
, pp. 729-748
-
-
Lee, T.I.1
Johnstone, S.E.2
Young, R.A.3
-
34
-
-
27644515513
-
The histone H3.3 chaperone HIRA is essential for chromatin assembly in the male pronucleus
-
Loppin B., Bonnefoy E., Anselme C., Laurençon A., Karr T.L., and Couble P. The histone H3.3 chaperone HIRA is essential for chromatin assembly in the male pronucleus. Nature 437 (2005) 1386-1390
-
(2005)
Nature
, vol.437
, pp. 1386-1390
-
-
Loppin, B.1
Bonnefoy, E.2
Anselme, C.3
Laurençon, A.4
Karr, T.L.5
Couble, P.6
-
35
-
-
34548433964
-
Marking histone H3 variants: how, when and why?
-
Loyola A., and Almouzni G. Marking histone H3 variants: how, when and why?. Trends Biochem. Sci. 32 (2007) 425-433
-
(2007)
Trends Biochem. Sci.
, vol.32
, pp. 425-433
-
-
Loyola, A.1
Almouzni, G.2
-
36
-
-
69849104275
-
TERRA: telomeric repeat-containing RNA
-
Luke B., and Lingner J. TERRA: telomeric repeat-containing RNA. EMBO J. 28 (2009) 2503-2510
-
(2009)
EMBO J.
, vol.28
, pp. 2503-2510
-
-
Luke, B.1
Lingner, J.2
-
37
-
-
73449094521
-
Resolving the composition of protein complexes using a MALDI LTQ Orbitrap
-
Luo Y., Li T., Yu F., Kramer T., and Cristea I.M. Resolving the composition of protein complexes using a MALDI LTQ Orbitrap. J. Am. Soc. Mass Spectrom. 21 (2009) 34-46
-
(2009)
J. Am. Soc. Mass Spectrom.
, vol.21
, pp. 34-46
-
-
Luo, Y.1
Li, T.2
Yu, F.3
Kramer, T.4
Cristea, I.M.5
-
38
-
-
58949094552
-
Telomeres acquire embryonic stem cell characteristics in induced pluripotent stem cells
-
Marion R.M., Strati K., Li H., Tejera A., Schoeftner S., Ortega S., Serrano M., and Blasco M.A. Telomeres acquire embryonic stem cell characteristics in induced pluripotent stem cells. Cell Stem Cell 4 (2009) 141-154
-
(2009)
Cell Stem Cell
, vol.4
, pp. 141-154
-
-
Marion, R.M.1
Strati, K.2
Li, H.3
Tejera, A.4
Schoeftner, S.5
Ortega, S.6
Serrano, M.7
Blasco, M.A.8
-
39
-
-
55849109584
-
The epigenetics of rRNA genes: from molecular to chromosome biology
-
McStay B., and Grummt I. The epigenetics of rRNA genes: from molecular to chromosome biology. Annu. Rev. Cell Dev. Biol. 24 (2008) 131-157
-
(2008)
Annu. Rev. Cell Dev. Biol.
, vol.24
, pp. 131-157
-
-
McStay, B.1
Grummt, I.2
-
40
-
-
29744447772
-
Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells
-
Meshorer E., Yellajoshula D., George E., Scambler P.J., Brown D.T., and Misteli T. Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells. Dev. Cell 10 (2006) 105-116
-
(2006)
Dev. Cell
, vol.10
, pp. 105-116
-
-
Meshorer, E.1
Yellajoshula, D.2
George, E.3
Scambler, P.J.4
Brown, D.T.5
Misteli, T.6
-
41
-
-
0024436330
-
Conservation of the human telomere sequence (TTAGGG)n among vertebrates
-
Meyne J., Ratliff R.L., and Moyzis R.K. Conservation of the human telomere sequence (TTAGGG)n among vertebrates. Proc. Natl. Acad. Sci. USA 86 (1989) 7049-7053
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 7049-7053
-
-
Meyne, J.1
Ratliff, R.L.2
Moyzis, R.K.3
-
42
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen T.S., Ku M., Jaffe D.B., Issac B., Lieberman E., Giannoukos G., Alvarez P., Brockman W., Kim T.K., Koche R.P., et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 448 (2007) 553-560
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.K.9
Koche, R.P.10
-
43
-
-
27144510368
-
Genome-scale profiling of histone H3.3 replacement patterns
-
Mito Y., Henikoff J.G., and Henikoff S. Genome-scale profiling of histone H3.3 replacement patterns. Nat. Genet. 37 (2005) 1090-1097
-
(2005)
Nat. Genet.
, vol.37
, pp. 1090-1097
-
-
Mito, Y.1
Henikoff, J.G.2
Henikoff, S.3
-
44
-
-
33947098453
-
Histone replacement marks the boundaries of cis-regulatory domains
-
Mito Y., Henikoff J.G., and Henikoff S. Histone replacement marks the boundaries of cis-regulatory domains. Science 315 (2007) 1408-1411
-
(2007)
Science
, vol.315
, pp. 1408-1411
-
-
Mito, Y.1
Henikoff, J.G.2
Henikoff, S.3
-
45
-
-
33847682924
-
Targeted gene addition into a specified location in the human genome using designed zinc finger nucleases
-
Moehle E.A., Moehle E.A., Rock J.M., Rock J.M., Lee Y.L., Lee Y.L., Jouvenot Y., Jouvenot Y., DeKelver R.C., Dekelver R.C., et al. Targeted gene addition into a specified location in the human genome using designed zinc finger nucleases. Proc. Natl. Acad. Sci. USA 104 (2007) 3055-3060
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 3055-3060
-
-
Moehle, E.A.1
Moehle, E.A.2
Rock, J.M.3
Rock, J.M.4
Lee, Y.L.5
Lee, Y.L.6
Jouvenot, Y.7
Jouvenot, Y.8
DeKelver, R.C.9
Dekelver, R.C.10
-
46
-
-
33947138617
-
Drosophila GAGA factor directs histone H3.3 replacement that prevents the heterochromatin spreading
-
Nakayama T., Nishioka K., Dong Y.X., Shimojima T., and Hirose S. Drosophila GAGA factor directs histone H3.3 replacement that prevents the heterochromatin spreading. Genes Dev. 21 (2007) 552-561
-
(2007)
Genes Dev.
, vol.21
, pp. 552-561
-
-
Nakayama, T.1
Nishioka, K.2
Dong, Y.X.3
Shimojima, T.4
Hirose, S.5
-
47
-
-
0029827343
-
ATRX encodes a novel member of the SNF2 family of proteins: mutations point to a common mechanism underlying the ATR-X syndrome
-
Picketts D.J., Higgs D.R., Bachoo S., Blake D.J., Quarrell O.W., and Gibbons R.J. ATRX encodes a novel member of the SNF2 family of proteins: mutations point to a common mechanism underlying the ATR-X syndrome. Hum. Mol. Genet. 5 (1996) 1899-1907
-
(1996)
Hum. Mol. Genet.
, vol.5
, pp. 1899-1907
-
-
Picketts, D.J.1
Higgs, D.R.2
Bachoo, S.3
Blake, D.J.4
Quarrell, O.W.5
Gibbons, R.J.6
-
48
-
-
67649669255
-
A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling
-
Ramirez-Carrozzi V.R., Braas D., Bhatt D.M., Cheng C.S., Hong C., Doty K.R., Black J.C., Hoffmann A., Carey M., and Smale S.T. A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling. Cell 138 (2009) 114-128
-
(2009)
Cell
, vol.138
, pp. 114-128
-
-
Ramirez-Carrozzi, V.R.1
Braas, D.2
Bhatt, D.M.3
Cheng, C.S.4
Hong, C.5
Doty, K.R.6
Black, J.C.7
Hoffmann, A.8
Carey, M.9
Smale, S.T.10
-
49
-
-
0036284794
-
HIRA is critical for a nucleosome assembly pathway independent of DNA synthesis
-
Ray-Gallet D., Quivy J.P., Scamps C., Martini E.M., Lipinski M., and Almouzni G. HIRA is critical for a nucleosome assembly pathway independent of DNA synthesis. Mol. Cell 9 (2002) 1091-1100
-
(2002)
Mol. Cell
, vol.9
, pp. 1091-1100
-
-
Ray-Gallet, D.1
Quivy, J.P.2
Scamps, C.3
Martini, E.M.4
Lipinski, M.5
Almouzni, G.6
-
50
-
-
0036124470
-
Targeted mutagenesis of the Hira gene results in gastrulation defects and patterning abnormalities of mesoendodermal derivatives prior to early embryonic lethality
-
Roberts C., Sutherland H.F., Farmer H., Kimber W., Halford S., Carey A., Brickman J.M., Wynshaw-Boris A., and Scambler P.J. Targeted mutagenesis of the Hira gene results in gastrulation defects and patterning abnormalities of mesoendodermal derivatives prior to early embryonic lethality. Mol. Cell. Biol. 22 (2002) 2318-2328
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 2318-2328
-
-
Roberts, C.1
Sutherland, H.F.2
Farmer, H.3
Kimber, W.4
Halford, S.5
Carey, A.6
Brickman, J.M.7
Wynshaw-Boris, A.8
Scambler, P.J.9
-
51
-
-
71849103121
-
Transcriptional and developmental functions of the H3.3 histone variant in Drosophila
-
Sakai A., Schwartz B.E., Goldstein S., and Ahmad K. Transcriptional and developmental functions of the H3.3 histone variant in Drosophila. Curr. Biol. 19 (2009) 1816-1820
-
(2009)
Curr. Biol.
, vol.19
, pp. 1816-1820
-
-
Sakai, A.1
Schwartz, B.E.2
Goldstein, S.3
Ahmad, K.4
-
52
-
-
31944432339
-
A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters
-
Saxonov S., Berg P., and Brutlag D.L. A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters. Proc. Natl. Acad. Sci. USA 103 (2006) 1412-1417
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 1412-1417
-
-
Saxonov, S.1
Berg, P.2
Brutlag, D.L.3
-
54
-
-
38849111756
-
Developmentally regulated transcription of mammalian telomeres by DNA-dependent RNA polymerase II
-
Schoeftner S., and Blasco M.A. Developmentally regulated transcription of mammalian telomeres by DNA-dependent RNA polymerase II. Nat. Cell Biol. 10 (2008) 228-236
-
(2008)
Nat. Cell Biol.
, vol.10
, pp. 228-236
-
-
Schoeftner, S.1
Blasco, M.A.2
-
55
-
-
39749145198
-
Dynamic regulation of nucleosome positioning in the human genome
-
Schones D.E., Cui K., Cuddapah S., Roh T.Y., Barski A., Wang Z., Wei G., and Zhao K. Dynamic regulation of nucleosome positioning in the human genome. Cell 132 (2008) 887-898
-
(2008)
Cell
, vol.132
, pp. 887-898
-
-
Schones, D.E.1
Cui, K.2
Cuddapah, S.3
Roh, T.Y.4
Barski, A.5
Wang, Z.6
Wei, G.7
Zhao, K.8
-
56
-
-
17044394787
-
Transcriptional activation triggers deposition and removal of the histone variant H3.3
-
Schwartz B.E., and Ahmad K. Transcriptional activation triggers deposition and removal of the histone variant H3.3. Genes Dev. 19 (2005) 804-814
-
(2005)
Genes Dev.
, vol.19
, pp. 804-814
-
-
Schwartz, B.E.1
Ahmad, K.2
-
57
-
-
67649635974
-
Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication
-
Sfeir A., Kosiyatrakul S.T., Hockemeyer D., MacRae S.L., Karlseder J., Schildkraut C.L., and de Lange T. Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication. Cell 138 (2009) 90-103
-
(2009)
Cell
, vol.138
, pp. 90-103
-
-
Sfeir, A.1
Kosiyatrakul, S.T.2
Hockemeyer, D.3
MacRae, S.L.4
Karlseder, J.5
Schildkraut, C.L.6
de Lange, T.7
-
58
-
-
65449138352
-
Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei
-
Siegel T.N., Hekstra D.R., Kemp L.E., Figueiredo L.M., Lowell J.E., Fenyo D., Wang X., Dewell S., and Cross G.A. Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei. Genes Dev. 23 (2009) 1063-1076
-
(2009)
Genes Dev.
, vol.23
, pp. 1063-1076
-
-
Siegel, T.N.1
Hekstra, D.R.2
Kemp, L.E.3
Figueiredo, L.M.4
Lowell, J.E.5
Fenyo, D.6
Wang, X.7
Dewell, S.8
Cross, G.A.9
-
59
-
-
0024372060
-
Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro
-
Smith S., and Stillman B. Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro. Cell 58 (1989) 15-25
-
(1989)
Cell
, vol.58
, pp. 15-25
-
-
Smith, S.1
Stillman, B.2
-
60
-
-
36749089980
-
Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells
-
Stock J.K., Giadrossi S., Casanova M., Brookes E., Vidal M., Koseki H., Brockdorff N., Fisher A.G., and Pombo A. Ring1-mediated ubiquitination of H2A restrains poised RNA polymerase II at bivalent genes in mouse ES cells. Nat. Cell Biol. 9 (2007) 1428-1435
-
(2007)
Nat. Cell Biol.
, vol.9
, pp. 1428-1435
-
-
Stock, J.K.1
Giadrossi, S.2
Casanova, M.3
Brookes, E.4
Vidal, M.5
Koseki, H.6
Brockdorff, N.7
Fisher, A.G.8
Pombo, A.9
-
61
-
-
63049103410
-
Dynamic histone variant exchange accompanies gene induction in T cells
-
Sutcliffe E.L., Parish I.A., He Y.Q., Juelich T., Tierney M.L., Rangasamy D., Milburn P.J., Parish C.R., Tremethick D.J., and Rao S. Dynamic histone variant exchange accompanies gene induction in T cells. Mol. Cell. Biol. 29 (2009) 1972-1986
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 1972-1986
-
-
Sutcliffe, E.L.1
Parish, I.A.2
He, Y.Q.3
Juelich, T.4
Tierney, M.L.5
Rangasamy, D.6
Milburn, P.J.7
Parish, C.R.8
Tremethick, D.J.9
Rao, S.10
-
62
-
-
0742304304
-
Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis
-
Tagami H., Ray-Gallet D., Almouzni G., and Nakatani Y. Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis. Cell 116 (2004) 51-61
-
(2004)
Cell
, vol.116
, pp. 51-61
-
-
Tagami, H.1
Ray-Gallet, D.2
Almouzni, G.3
Nakatani, Y.4
-
63
-
-
65449116505
-
Chromatin-based transcriptional punctuation
-
Talbert P.B., and Henikoff S. Chromatin-based transcriptional punctuation. Genes Dev. 23 (2009) 1037-1041
-
(2009)
Genes Dev.
, vol.23
, pp. 1037-1041
-
-
Talbert, P.B.1
Henikoff, S.2
-
64
-
-
66449111160
-
Inducible deposition of the histone variant H3.3 in interferon-stimulated genes
-
Tamura T., Smith M., Kanno T., Dasenbrock H., Nishiyama A., and Ozato K. Inducible deposition of the histone variant H3.3 in interferon-stimulated genes. J. Biol. Chem. 284 (2009) 12217-12225
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 12217-12225
-
-
Tamura, T.1
Smith, M.2
Kanno, T.3
Dasenbrock, H.4
Nishiyama, A.5
Ozato, K.6
-
65
-
-
2442590725
-
A novel transcription regulatory complex containing death domain-associated protein and the ATR-X syndrome protein
-
Tang J., Wu S., Liu H., Stratt R., Barak O.G., Shiekhattar R., Picketts D.J., and Yang X. A novel transcription regulatory complex containing death domain-associated protein and the ATR-X syndrome protein. J. Biol. Chem. 279 (2004) 20369-20377
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 20369-20377
-
-
Tang, J.1
Wu, S.2
Liu, H.3
Stratt, R.4
Barak, O.G.5
Shiekhattar, R.6
Picketts, D.J.7
Yang, X.8
-
66
-
-
18944373328
-
Highly efficient endogenous human gene correction using designed zinc-finger nucleases
-
Urnov F.D., Miller J.C., Lee Y.L., Beausejour C.M., Rock J.M., Augustus S., Jamieson A.C., Porteus M.H., Gregory P.D., and Holmes M.C. Highly efficient endogenous human gene correction using designed zinc-finger nucleases. Nature 435 (2005) 646-651
-
(2005)
Nature
, vol.435
, pp. 646-651
-
-
Urnov, F.D.1
Miller, J.C.2
Lee, Y.L.3
Beausejour, C.M.4
Rock, J.M.5
Augustus, S.6
Jamieson, A.C.7
Porteus, M.H.8
Gregory, P.D.9
Holmes, M.C.10
-
67
-
-
46249112085
-
Combinatorial patterns of histone acetylations and methylations in the human genome
-
Wang Z., Zang C., Rosenfeld J.A., Schones D.E., Barski A., Cuddapah S., Cui K., Roh T.Y., Peng W., Zhang M.Q., and Zhao K. Combinatorial patterns of histone acetylations and methylations in the human genome. Nat. Genet. 40 (2008) 897-903
-
(2008)
Nat. Genet.
, vol.40
, pp. 897-903
-
-
Wang, Z.1
Zang, C.2
Rosenfeld, J.A.3
Schones, D.E.4
Barski, A.5
Cuddapah, S.6
Cui, K.7
Roh, T.Y.8
Peng, W.9
Zhang, M.Q.10
Zhao, K.11
-
68
-
-
61849118594
-
Histone H3.3 incorporation provides a unique and functionally essential telomeric chromatin in embryonic stem cells
-
Wong L.H., Ren H., Williams E., McGhie J., Ahn S., Sim M., Tam A., Earle E., Anderson M.A., Mann J., and Choo K.H. Histone H3.3 incorporation provides a unique and functionally essential telomeric chromatin in embryonic stem cells. Genome Res. 19 (2009) 404-414
-
(2009)
Genome Res.
, vol.19
, pp. 404-414
-
-
Wong, L.H.1
Ren, H.2
Williams, E.3
McGhie, J.4
Ahn, S.5
Sim, M.6
Tam, A.7
Earle, E.8
Anderson, M.A.9
Mann, J.10
Choo, K.H.11
-
69
-
-
0141703327
-
The ATRX syndrome protein forms a chromatin-remodeling complex with Daxx and localizes in promyelocytic leukemia nuclear bodies
-
Xue Y., Gibbons R., Yan Z., Yang D., McDowell T.L., Sechi S., Qin J., Zhou S., Higgs D., and Wang W. The ATRX syndrome protein forms a chromatin-remodeling complex with Daxx and localizes in promyelocytic leukemia nuclear bodies. Proc. Natl. Acad. Sci. USA 100 (2003) 10635-10640
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 10635-10640
-
-
Xue, Y.1
Gibbons, R.2
Yan, Z.3
Yang, D.4
McDowell, T.L.5
Sechi, S.6
Qin, J.7
Zhou, S.8
Higgs, D.9
Wang, W.10
|