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Volumn 8, Issue 5, 2013, Pages

Genome-Wide Identification, Characterization and Phylogenetic Analysis of 50 Catfish ATP-Binding Cassette (ABC) Transporter Genes

Author keywords

[No Author keywords available]

Indexed keywords

ABC TRANSPORTER; ABC TRANSPORTER A1; ABC TRANSPORTER A12; ABC TRANSPORTER A1B; ABC TRANSPORTER A4; ABC TRANSPORTER A5; ABC TRANSPORTER A7; ABC TRANSPORTER B10; ABC TRANSPORTER B11; ABC TRANSPORTER B6; ABC TRANSPORTER B7; ABC TRANSPORTER B8; ABC TRANSPORTER B9; ABC TRANSPORTER C1; ABC TRANSPORTER C10; ABC TRANSPORTER C12; ABC TRANSPORTER C2; ABC TRANSPORTER C3; ABC TRANSPORTER C4; ABC TRANSPORTER C5; ABC TRANSPORTER C6; ABC TRANSPORTER C7; ABC TRANSPORTER C8; ABC TRANSPORTER C9; ABC TRANSPORTER CF; ABC TRANSPORTER D1; ABC TRANSPORTER D2; ABC TRANSPORTER G; MULTIDRUG RESISTANCE PROTEIN 1; UNCLASSIFIED DRUG; UNINDEXED DRUG;

EID: 84877795532     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0063895     Document Type: Article
Times cited : (60)

References (76)
  • 1
    • 34447258186 scopus 로고    scopus 로고
    • Towards the ictalurid catfish transcriptome: generation and analysis of 31,215 catfish ESTs
    • Li P, Peatman E, Wang S, Feng J, He C, et al. (2007) Towards the ictalurid catfish transcriptome: generation and analysis of 31,215 catfish ESTs. BMC Genomics 8: 177.
    • (2007) BMC Genomics , vol.8 , pp. 177
    • Li, P.1    Peatman, E.2    Wang, S.3    Feng, J.4    He, C.5
  • 2
    • 77349083472 scopus 로고    scopus 로고
    • Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
    • Wang S, Peatman E, Abernathy J, Waldbieser G, Lindquist E, et al. (2010) Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies. Genome Biol 11: R8.
    • (2010) Genome Biol , vol.11
    • Wang, S.1    Peatman, E.2    Abernathy, J.3    Waldbieser, G.4    Lindquist, E.5
  • 3
    • 84862786822 scopus 로고    scopus 로고
    • RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus
    • Li C, Zhang Y, Wang R, Lu J, Nandi S, et al. (2012) RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus. Fish Shellfish Immunol 32: 816-827.
    • (2012) Fish Shellfish Immunol , vol.32 , pp. 816-827
    • Li, C.1    Zhang, Y.2    Wang, R.3    Lu, J.4    Nandi, S.5
  • 4
    • 84874199636 scopus 로고    scopus 로고
    • Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote
    • Liu S, Zhang Y, Zhou Z, Waldbieser G, Sun F, et al. (2012) Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. BMC Genomics 13: 595.
    • (2012) BMC Genomics , vol.13 , pp. 595
    • Liu, S.1    Zhang, Y.2    Zhou, Z.3    Waldbieser, G.4    Sun, F.5
  • 5
    • 78651551997 scopus 로고    scopus 로고
    • Generation of genome-scale gene-associated SNPs in catfish for the construction of a high-density SNP array
    • Liu S, Zhou Z, Lu J, Sun F, Wang S, et al. (2011) Generation of genome-scale gene-associated SNPs in catfish for the construction of a high-density SNP array. BMC Genomics 12: 53.
    • (2011) BMC Genomics , vol.12 , pp. 53
    • Liu, S.1    Zhou, Z.2    Lu, J.3    Sun, F.4    Wang, S.5
  • 6
    • 84864377334 scopus 로고    scopus 로고
    • Transcriptomic signatures of attachment, NF-kappaB suppression and IFN stimulation in the catfish gill following columnaris bacterial infection
    • Sun F, Peatman E, Li C, Liu S, Jiang Y, et al. (2012) Transcriptomic signatures of attachment, NF-kappaB suppression and IFN stimulation in the catfish gill following columnaris bacterial infection. Dev Comp Immunol 38: 169-180.
    • (2012) Dev Comp Immunol , vol.38 , pp. 169-180
    • Sun, F.1    Peatman, E.2    Li, C.3    Liu, S.4    Jiang, Y.5
  • 7
    • 0035014565 scopus 로고    scopus 로고
    • The ABC of ABCS: a phylogenetic and functional classification of ABC systems in living organisms
    • Dassa E, Bouige P, (2001) The ABC of ABCS: a phylogenetic and functional classification of ABC systems in living organisms. Res Microbiol 152: 211-229.
    • (2001) Res Microbiol , vol.152 , pp. 211-229
    • Dassa, E.1    Bouige, P.2
  • 8
    • 25844487733 scopus 로고    scopus 로고
    • Evolution of the ATP-binding cassette (ABC) transporter superfamily in vertebrates
    • Dean M, Annilo T, (2005) Evolution of the ATP-binding cassette (ABC) transporter superfamily in vertebrates. Annu Rev Genomics Hum Genet 6: 123-142.
    • (2005) Annu Rev Genomics Hum Genet , vol.6 , pp. 123-142
    • Dean, M.1    Annilo, T.2
  • 9
    • 0034953105 scopus 로고    scopus 로고
    • The human ATP-binding cassette (ABC) transporter superfamily
    • Dean M, Hamon Y, Chimini G, (2001) The human ATP-binding cassette (ABC) transporter superfamily. J Lipid Res 42: 1007-1017.
    • (2001) J Lipid Res , vol.42 , pp. 1007-1017
    • Dean, M.1    Hamon, Y.2    Chimini, G.3
  • 10
    • 0034917716 scopus 로고    scopus 로고
    • The human ATP-binding cassette (ABC) transporter superfamily
    • Dean M, Rzhetsky A, Allikmets R, (2001) The human ATP-binding cassette (ABC) transporter superfamily. Genome Res 11: 1156-1166.
    • (2001) Genome Res , vol.11 , pp. 1156-1166
    • Dean, M.1    Rzhetsky, A.2    Allikmets, R.3
  • 11
    • 33748644877 scopus 로고    scopus 로고
    • Structure of a bacterial multidrug ABC transporter
    • Dawson RJ, Locher KP, (2006) Structure of a bacterial multidrug ABC transporter. Nature 443: 180-185.
    • (2006) Nature , vol.443 , pp. 180-185
    • Dawson, R.J.1    Locher, K.P.2
  • 12
    • 33947154878 scopus 로고    scopus 로고
    • Structure of an ABC transporter in complex with its binding protein
    • Hollenstein K, Frei DC, Locher KP, (2007) Structure of an ABC transporter in complex with its binding protein. Nature 446: 213-216.
    • (2007) Nature , vol.446 , pp. 213-216
    • Hollenstein, K.1    Frei, D.C.2    Locher, K.P.3
  • 13
    • 4444266487 scopus 로고    scopus 로고
    • The ABC transporter gene family of Caenorhabditis elegans has implications for the evolutionary dynamics of multidrug resistance in eukaryotes
    • Sheps JA, Ralph S, Zhao ZY, Baillie DL, Ling V (2004) The ABC transporter gene family of Caenorhabditis elegans has implications for the evolutionary dynamics of multidrug resistance in eukaryotes. Genome Biology 5.
    • (2004) Genome Biology , vol.5
    • Sheps, J.A.1    Ralph, S.2    Zhao, Z.Y.3    Baillie, D.L.4    Ling, V.5
  • 14
    • 0032951188 scopus 로고    scopus 로고
    • Getting in or out: Early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters
    • Saurin W, Hofnung M, Dassa E, (1999) Getting in or out: Early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Journal of Molecular Evolution 48: 22-41.
    • (1999) Journal of Molecular Evolution , vol.48 , pp. 22-41
    • Saurin, W.1    Hofnung, M.2    Dassa, E.3
  • 16
    • 33750384376 scopus 로고    scopus 로고
    • Modulation of Leishmania ABC protein gene expression through life stages and among drug-resistant parasites
    • Leprohon P, Legare D, Girard I, Papadopoulou B, Ouellette M, (2006) Modulation of Leishmania ABC protein gene expression through life stages and among drug-resistant parasites. Eukaryotic Cell 5: 1713-1725.
    • (2006) Eukaryotic Cell , vol.5 , pp. 1713-1725
    • Leprohon, P.1    Legare, D.2    Girard, I.3    Papadopoulou, B.4    Ouellette, M.5
  • 17
    • 79951988264 scopus 로고    scopus 로고
    • Genetic analysis of the xenobiotic resistance-associated ABC gene subfamilies of the Lepidoptera
    • Labbe R, Caveney S, Donly C, (2011) Genetic analysis of the xenobiotic resistance-associated ABC gene subfamilies of the Lepidoptera. Insect Molecular Biology 20: 243-256.
    • (2011) Insect Molecular Biology , vol.20 , pp. 243-256
    • Labbe, R.1    Caveney, S.2    Donly, C.3
  • 18
    • 4744350877 scopus 로고    scopus 로고
    • The essential ATP-binding cassette protein RLI1 functions in translation by promoting preinitiation complex assembly
    • Dong JS, Lai R, Nielsen K, Fekete CA, Qiu HF, et al. (2004) The essential ATP-binding cassette protein RLI1 functions in translation by promoting preinitiation complex assembly. Journal of Biological Chemistry 279: 42157-42168.
    • (2004) Journal of Biological Chemistry , vol.279 , pp. 42157-42168
    • Dong, J.S.1    Lai, R.2    Nielsen, K.3    Fekete, C.A.4    Qiu, H.F.5
  • 19
    • 80053587652 scopus 로고    scopus 로고
    • Genome-wide identification and characterization of ATP-binding cassette transporters in the silkworm, Bombyx mori
    • Liu SM, Zhou S, Tian L, Guo EN, Luan YX, et al. (2011) Genome-wide identification and characterization of ATP-binding cassette transporters in the silkworm, Bombyx mori. BMC Genomics 12.
    • (2011) BMC Genomics , vol.12
    • Liu, S.M.1    Zhou, S.2    Tian, L.3    Guo, E.N.4    Luan, Y.X.5
  • 20
    • 65649130849 scopus 로고    scopus 로고
    • The ABC transporter gene family of Daphnia pulex
    • Sturm A, Cunningham P, Dean M (2009) The ABC transporter gene family of Daphnia pulex. BMC Genomics 10.
    • (2009) BMC Genomics , vol.10
    • Sturm, A.1    Cunningham, P.2    Dean, M.3
  • 21
    • 84864288759 scopus 로고    scopus 로고
    • Genome-wide analysis of the ATP-binding cassette (ABC) transporter gene family in the silkworm, Bombyx mori
    • Xie XD, Cheng TC, Wang GH, Duan J, Niu WH, et al. (2012) Genome-wide analysis of the ATP-binding cassette (ABC) transporter gene family in the silkworm, Bombyx mori. Molecular Biology Reports 39: 7281-7291.
    • (2012) Molecular Biology Reports , vol.39 , pp. 7281-7291
    • Xie, X.D.1    Cheng, T.C.2    Wang, G.H.3    Duan, J.4    Niu, W.H.5
  • 22
    • 77958458748 scopus 로고    scopus 로고
    • Genome-wide identification and evolution of ATP-binding cassette transporters in the ciliate Tetrahymena thermophila: A case of functional divergence in a multigene family
    • Xiong J, Feng LF, Yuan DX, Fu CJ, Miao W (2010) Genome-wide identification and evolution of ATP-binding cassette transporters in the ciliate Tetrahymena thermophila: A case of functional divergence in a multigene family. Bmc Evolutionary Biology 10.
    • (2010) Bmc Evolutionary Biology , vol.10
    • Xiong, J.1    Feng, L.F.2    Yuan, D.X.3    Fu, C.J.4    Miao, W.5
  • 23
    • 34249037676 scopus 로고    scopus 로고
    • Comparative genomics and adaptive selection of the ATP-binding-cassette gene family in Caenorhabditis species
    • Zhao ZY, Thomas JH, Chen NS, Sheps JA, Baillie DL, (2007) Comparative genomics and adaptive selection of the ATP-binding-cassette gene family in Caenorhabditis species. Genetics 175: 1407-1418.
    • (2007) Genetics , vol.175 , pp. 1407-1418
    • Zhao, Z.Y.1    Thomas, J.H.2    Chen, N.S.3    Sheps, J.A.4    Baillie, D.L.5
  • 24
    • 33846842260 scopus 로고    scopus 로고
    • Evolutionary dynamics of the ABCA chromosome 17q24 cluster genes in vertebrates
    • Li G, Shi P, Wang YQ, (2007) Evolutionary dynamics of the ABCA chromosome 17q24 cluster genes in vertebrates. Genomics 89: 385-391.
    • (2007) Genomics , vol.89 , pp. 385-391
    • Li, G.1    Shi, P.2    Wang, Y.Q.3
  • 25
    • 12244262264 scopus 로고    scopus 로고
    • Evolutionary analysis of a cluster of ATP-binding cassette (ABC) genes
    • Annilo T, Chen ZQ, Shulenin S, Dean M, (2003) Evolutionary analysis of a cluster of ATP-binding cassette (ABC) genes. Mammalian Genome 14: 7-20.
    • (2003) Mammalian Genome , vol.14 , pp. 7-20
    • Annilo, T.1    Chen, Z.Q.2    Shulenin, S.3    Dean, M.4
  • 26
    • 79551550020 scopus 로고    scopus 로고
    • Molecular Evolutionary Analysis of ABCB5: The Ancestral Gene Is a Full Transporter with Potentially Deleterious Single Nucleotide Polymorphisms
    • Moitra K, Scally M, Mcgee K, Lancaster G, Gold B, et al. (2011) Molecular Evolutionary Analysis of ABCB5: The Ancestral Gene Is a Full Transporter with Potentially Deleterious Single Nucleotide Polymorphisms. Plos One 6.
    • (2011) Plos One , vol.6
    • Moitra, K.1    Scally, M.2    Mcgee, K.3    Lancaster, G.4    Gold, B.5
  • 27
    • 33744905217 scopus 로고    scopus 로고
    • Evolution of the vertebrate ABC gene family: Analysis of gene birth and death
    • Annilo T, Chen ZQ, Shulenin S, Costantino J, Thomas L, et al. (2006) Evolution of the vertebrate ABC gene family: Analysis of gene birth and death. Genomics 88: 1-11.
    • (2006) Genomics , vol.88 , pp. 1-11
    • Annilo, T.1    Chen, Z.Q.2    Shulenin, S.3    Costantino, J.4    Thomas, L.5
  • 28
    • 0032580152 scopus 로고    scopus 로고
    • A molecular timescale for vertebrate evolution
    • Kumar S, Hedges SB, (1998) A molecular timescale for vertebrate evolution. Nature 392: 917-920.
    • (1998) Nature , vol.392 , pp. 917-920
    • Kumar, S.1    Hedges, S.B.2
  • 29
    • 0345724724 scopus 로고    scopus 로고
    • The MRP family of drug efflux pumps
    • Kruh GD, Belinsky MG, (2003) The MRP family of drug efflux pumps. Oncogene 22: 7537-7552.
    • (2003) Oncogene , vol.22 , pp. 7537-7552
    • Kruh, G.D.1    Belinsky, M.G.2
  • 30
    • 33745835398 scopus 로고    scopus 로고
    • Transmembrane transport of endo- and xenobiotics by mammalian ATP-binding cassette multidrug resistance proteins
    • Deeley RG, Westlake C, Cole SPC, (2006) Transmembrane transport of endo- and xenobiotics by mammalian ATP-binding cassette multidrug resistance proteins. Physiological Reviews 86: 849-899.
    • (2006) Physiological Reviews , vol.86 , pp. 849-899
    • Deeley, R.G.1    Westlake, C.2    Cole, S.P.C.3
  • 31
    • 65549121495 scopus 로고    scopus 로고
    • Human ATP-binding cassette (ABC) transporter family
    • Vasiliou V, Vasiliou K, Nebert DW, (2009) Human ATP-binding cassette (ABC) transporter family. Hum Genomics 3: 281-290.
    • (2009) Hum Genomics , vol.3 , pp. 281-290
    • Vasiliou, V.1    Vasiliou, K.2    Nebert, D.W.3
  • 37
    • 4143134848 scopus 로고    scopus 로고
    • Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish
    • Hoegg S, Brinkmann H, Taylor JS, Meyer A, (2004) Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish. Journal of Molecular Evolution 59: 190-203.
    • (2004) Journal of Molecular Evolution , vol.59 , pp. 190-203
    • Hoegg, S.1    Brinkmann, H.2    Taylor, J.S.3    Meyer, A.4
  • 42
    • 0034879774 scopus 로고    scopus 로고
    • ABCA1: the gatekeeper for eliminating excess tissue cholesterol
    • Oram JF, Lawn RM, (2001) ABCA1: the gatekeeper for eliminating excess tissue cholesterol. Journal of Lipid Research 42: 1173-1179.
    • (2001) Journal of Lipid Research , vol.42 , pp. 1173-1179
    • Oram, J.F.1    Lawn, R.M.2
  • 43
    • 0033775698 scopus 로고    scopus 로고
    • Biochemical defects in ABCR protein variants associated with human retinopathies
    • Sun H, Smallwood PM, Nathans J, (2000) Biochemical defects in ABCR protein variants associated with human retinopathies. Nature Genetics 26: 242-246.
    • (2000) Nature Genetics , vol.26 , pp. 242-246
    • Sun, H.1    Smallwood, P.M.2    Nathans, J.3
  • 45
    • 4544336851 scopus 로고    scopus 로고
    • The ABCs of immunology: Structure and function of TAP, the transporter associated with antigen processing
    • Abele R, Tampe R, (2004) The ABCs of immunology: Structure and function of TAP, the transporter associated with antigen processing. Physiology 19: 216-224.
    • (2004) Physiology , vol.19 , pp. 216-224
    • Abele, R.1    Tampe, R.2
  • 46
    • 31944452502 scopus 로고    scopus 로고
    • Modulation of the antigen transport machinery TAP by friends and enemies
    • Abele R, Tampe R, (2006) Modulation of the antigen transport machinery TAP by friends and enemies. Febs Letters 580: 1156-1163.
    • (2006) Febs Letters , vol.580 , pp. 1156-1163
    • Abele, R.1    Tampe, R.2
  • 47
    • 84862893497 scopus 로고    scopus 로고
    • ABC Transporters and Immunity: Mechanism of Self-Defense
    • Hinz A, Tampe R, (2012) ABC Transporters and Immunity: Mechanism of Self-Defense. Biochemistry 51: 4981-4989.
    • (2012) Biochemistry , vol.51 , pp. 4981-4989
    • Hinz, A.1    Tampe, R.2
  • 48
    • 84862777314 scopus 로고    scopus 로고
    • ABCB6 is dispensable for erythropoiesis and specifies the new blood group system Langereis
    • Helias V, Saison C, Ballif BA, Peyrard T, Takahashi J, et al. (2012) ABCB6 is dispensable for erythropoiesis and specifies the new blood group system Langereis. Nature Genetics 44: 170-173.
    • (2012) Nature Genetics , vol.44 , pp. 170-173
    • Helias, V.1    Saison, C.2    Ballif, B.A.3    Peyrard, T.4    Takahashi, J.5
  • 49
    • 33749530252 scopus 로고    scopus 로고
    • Identification of a mammalian mitochondrial porphyrin transporter
    • Krishnamurthy PC, Du GQ, Fukuda Y, Sun DX, Sampath J, et al. (2006) Identification of a mammalian mitochondrial porphyrin transporter. Nature 443: 586-589.
    • (2006) Nature , vol.443 , pp. 586-589
    • Krishnamurthy, P.C.1    Du, G.Q.2    Fukuda, Y.3    Sun, D.X.4    Sampath, J.5
  • 50
    • 79953074548 scopus 로고    scopus 로고
    • The ATP-Binding Cassette Transporter ABCB6 Is Induced by Arsenic and Protects against Arsenic Cytotoxicity
    • Chavan H, Oruganti M, Krishnamurthy P, (2011) The ATP-Binding Cassette Transporter ABCB6 Is Induced by Arsenic and Protects against Arsenic Cytotoxicity. Toxicological Sciences 120: 519-528.
    • (2011) Toxicological Sciences , vol.120 , pp. 519-528
    • Chavan, H.1    Oruganti, M.2    Krishnamurthy, P.3
  • 51
    • 84859759571 scopus 로고    scopus 로고
    • ATP-dependent Mitochondrial Porphyrin Importer ABCB6 Protects against Phenylhydrazine Toxicity
    • Ulrich DL, Lynch J, Wang Y, Fukuda Y, Nachagari D, et al. (2012) ATP-dependent Mitochondrial Porphyrin Importer ABCB6 Protects against Phenylhydrazine Toxicity. Journal of Biological Chemistry 287: 12679-12690.
    • (2012) Journal of Biological Chemistry , vol.287 , pp. 12679-12690
    • Ulrich, D.L.1    Lynch, J.2    Wang, Y.3    Fukuda, Y.4    Nachagari, D.5
  • 52
    • 0036186107 scopus 로고    scopus 로고
    • The MRP4/ABCC4 gene encodes a novel apical organic anion transporter in human kidney proximal tubules: putative efflux pump for urinary cAMP and cGMP
    • van Aubel RA, Smeets PH, Peters JG, Bindels RJ, Russel FG, (2002) The MRP4/ABCC4 gene encodes a novel apical organic anion transporter in human kidney proximal tubules: putative efflux pump for urinary cAMP and cGMP. J Am Soc Nephrol 13: 595-603.
    • (2002) J Am Soc Nephrol , vol.13 , pp. 595-603
    • van Aubel, R.A.1    Smeets, P.H.2    Peters, J.G.3    Bindels, R.J.4    Russel, F.G.5
  • 54
    • 0032788372 scopus 로고    scopus 로고
    • Molecular biology of adenosine triphosphate-sensitive potassium channels
    • Aguilar-Bryan L, Bryan J, (1999) Molecular biology of adenosine triphosphate-sensitive potassium channels. Endocr Rev 20: 101-135.
    • (1999) Endocr Rev , vol.20 , pp. 101-135
    • Aguilar-Bryan, L.1    Bryan, J.2
  • 55
    • 0032720233 scopus 로고    scopus 로고
    • Sulfonylurea receptors: ABC transporters that regulate ATP-sensitive K+ channels
    • Bryan J, Aguilar-Bryan Z, (1999) Sulfonylurea receptors: ABC transporters that regulate ATP-sensitive K+ channels. Biochimica Et Biophysica Acta-Biomembranes 1461: 285-303.
    • (1999) Biochimica Et Biophysica Acta-Biomembranes , vol.1461 , pp. 285-303
    • Bryan, J.1    Aguilar-Bryan, Z.2
  • 56
    • 0029898253 scopus 로고    scopus 로고
    • A family of sulfonylurea receptors determines the pharmacological properties of ATP-sensitive K+ channels
    • Inagaki N, Gonoi T, Clement JP, Wang CZ, AguilarBryan L, et al. (1996) A family of sulfonylurea receptors determines the pharmacological properties of ATP-sensitive K+ channels. Neuron 16: 1011-1017.
    • (1996) Neuron , vol.16 , pp. 1011-1017
    • Inagaki, N.1    Gonoi, T.2    Clement, J.P.3    Wang, C.Z.4    AguilarBryan, L.5
  • 57
    • 0842308114 scopus 로고    scopus 로고
    • Sequence analysis of twin ATP binding cassette proteins involved in translational control, antibiotic resistance, and ribonuclease L inhibition
    • Kerr ID, (2004) Sequence analysis of twin ATP binding cassette proteins involved in translational control, antibiotic resistance, and ribonuclease L inhibition. Biochemical and Biophysical Research Communications 315: 166-173.
    • (2004) Biochemical and Biophysical Research Communications , vol.315 , pp. 166-173
    • Kerr, I.D.1
  • 60
    • 0034602140 scopus 로고    scopus 로고
    • ABC50 interacts with eukaryotic initiation factor 2 and associates with the ribosome in an ATP-dependent manner
    • Tyzack JK, Wang X, Belsham GJ, Proud CG, (2000) ABC50 interacts with eukaryotic initiation factor 2 and associates with the ribosome in an ATP-dependent manner. J Biol Chem 275: 34131-34139.
    • (2000) J Biol Chem , vol.275 , pp. 34131-34139
    • Tyzack, J.K.1    Wang, X.2    Belsham, G.J.3    Proud, C.G.4
  • 61
    • 38049098102 scopus 로고    scopus 로고
    • ABCG1 and ABCG4 are coexpressed in neurons and astrocytes of the CNS and regulate cholesterol homeostasis through SREBP-2
    • Tarr PT, Edwards PA, (2008) ABCG1 and ABCG4 are coexpressed in neurons and astrocytes of the CNS and regulate cholesterol homeostasis through SREBP-2. Journal of Lipid Research 49: 169-182.
    • (2008) Journal of Lipid Research , vol.49 , pp. 169-182
    • Tarr, P.T.1    Edwards, P.A.2
  • 63
    • 80053436675 scopus 로고    scopus 로고
    • The ABCG family of membrane-associated transporters: you don't have to be big to be mighty
    • Kerr ID, Haider AJ, Gelissen IC, (2011) The ABCG family of membrane-associated transporters: you don't have to be big to be mighty. British Journal of Pharmacology 164: 1767-1779.
    • (2011) British Journal of Pharmacology , vol.164 , pp. 1767-1779
    • Kerr, I.D.1    Haider, A.J.2    Gelissen, I.C.3
  • 64
    • 59049084011 scopus 로고    scopus 로고
    • Physiological and pharmacological roles of ABCG2 (BCRP): Recent findings in Abcg2 knockout mice
    • Vlaming MLH, Lagas JS, Schinkel AH, (2009) Physiological and pharmacological roles of ABCG2 (BCRP): Recent findings in Abcg2 knockout mice. Advanced Drug Delivery Reviews 61: 14-25.
    • (2009) Advanced Drug Delivery Reviews , vol.61 , pp. 14-25
    • Vlaming, M.L.H.1    Lagas, J.S.2    Schinkel, A.H.3
  • 66
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • Burge C, Karlin S, (1997) Prediction of complete gene structures in human genomic DNA. Journal of Molecular Biology 268: 78-94.
    • (1997) Journal of Molecular Biology , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 68
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC, (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 69
    • 68049142320 scopus 로고    scopus 로고
    • Multiple alignment of DNA sequences with MAFFT
    • Katoh K, Asimenos G, Toh H, (2009) Multiple alignment of DNA sequences with MAFFT. Methods Mol Biol 537: 39-64.
    • (2009) Methods Mol Biol , vol.537 , pp. 39-64
    • Katoh, K.1    Asimenos, G.2    Toh, H.3
  • 70
    • 33747818327 scopus 로고    scopus 로고
    • Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignment
    • Lassmann T, Sonnhammer EL, (2006) Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignment. Nucleic Acids Res 34: W596-599.
    • (2006) Nucleic Acids Res , vol.34
    • Lassmann, T.1    Sonnhammer, E.L.2
  • 71
    • 34547489084 scopus 로고    scopus 로고
    • Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
    • Talavera G, Castresana J, (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Syst Biol 56: 564-577.
    • (2007) Syst Biol , vol.56 , pp. 564-577
    • Talavera, G.1    Castresana, J.2
  • 72
    • 79954529507 scopus 로고    scopus 로고
    • ProtTest 3: fast selection of best-fit models of protein evolution
    • Darriba D, Taboada GL, Doallo R, Posada D, (2011) ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27: 1164-1165.
    • (2011) Bioinformatics , vol.27 , pp. 1164-1165
    • Darriba, D.1    Taboada, G.L.2    Doallo, R.3    Posada, D.4
  • 73
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A, (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 74
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, et al. (2011) MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution 28: 2731-2739.
    • (2011) Molecular Biology and Evolution , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5
  • 75
    • 75149150388 scopus 로고    scopus 로고
    • TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses
    • Stover BC, Muller KF (2010) TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses. Bmc Bioinformatics 11.
    • (2010) Bmc Bioinformatics , vol.11
    • Stover, B.C.1    Muller, K.F.2
  • 76


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.