Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote

BMC Genomics

Volumn 13, Issue 1, 2012, Pages

  Liu, Shikai ^a,b   Zhang, Yu ^a   Zhou, Zunchun ^a   Waldbieser, Geoff ^c   Sun, Fanyue ^a   Lu, Jianguo ^a   Zhang, Jiaren ^a   Jiang, Yanliang ^a   Zhang, Hao ^a   Wang, Xiuli ^a   Rajendran, K V ^a   Khoo, Lester ^d   Kucuktas, Huseyin ^a   Peatman, Eric ^a   Liu, Zhanjiang ^a  

^a AUBURN UNIVERSITY   (United States)

^b OCEAN UNIVERSITY OF CHINA   (China)

^c AGRICULTURAL RESEARCH SERVICE   (United States)

^d MISSISSIPPI STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTOME;

3' UNTRANSLATED REGION; 5' UNTRANSLATED REGION; ARTICLE; CATFISH; CHROMOSOME ANALYSIS; CONTROLLED STUDY; FISH GENETICS; GENE DUPLICATION; GENE IDENTIFICATION; GENETIC CODE; GENETIC TRANSCRIPTION; HAPLOIDY; HOMOZYGOSITY; NONHUMAN; OPEN READING FRAME; RNA SEQUENCE; SEQUENCE ANALYSIS; SINGLE NUCLEOTIDE POLYMORPHISM; START CODON; STOP CODON; TRANSCRIPTOMICS;

ANIMALS; BASE SEQUENCE; CATFISHES; CHROMOSOME MAPPING; CONTIG MAPPING; GENE DUPLICATION; GENE EXPRESSION PROFILING; GENETIC VARIATION; GENOME; HAPLOIDY; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HOMOZYGOTE; OPEN READING FRAMES; PHYLOGENY; RNA; SEQUENCE ANALYSIS, RNA; TRANSCRIPTOME;

ICTALURUS PUNCTATUS; TELEOSTEI;

EID: 84874199636     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-595     Document Type: Article

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