PCR-RFLP analysis using capillary electrophoresis for species identification of Cyprinidae-related products

Food Control

Volumn 33, Issue 2, 2013, Pages 477-483

  Chen, Chien Hung ^a   Hsieh, Cheng Hong ^b   Hwang, Deng Fwu ^a,b  

^a NATIONAL TAIWAN OCEAN UNIVERSITY   (Taiwan)

^b ASIA UNIVERSITY   (Taiwan)

Author keywords

Capillary electrophoresis; Cyprinidae; Cytochrome b gene; DNA degradation; Mitochondria; PCR RFLP

Indexed keywords

CARASSIUS AURATUS; CARASSIUS AURATUS AURATUS; CTENOPHARYNGODON IDELLA; CYPRINIDAE; CYPRINIFORMES; CYPRINUS CARPIO CARPIO;

EID: 84877000205     PISSN: 09567135     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.foodcont.2013.03.036     Document Type: Article

References (26)

1. Callejas C., Ochando M.D. Recent radiation of Iberian barbel fish (Teleostei, Cyprinidae) inferred from cytochrome b genes. Journal of Heredity 2000, 91:283-288.
2. Calvo J.H., Zaragoza P., Osta R. Technical note A quick and more sensitive method to identify pork in processed and unprocessed food by PCR amplification of a new specific DNA fragment. Journal of Animal Science 2001, 79:2108-2112.
3. Cammà C., Di Domenico M., Monaco F. Development and validation of fast real-time PCR assays for species identification in raw and cooked meat mixtures. Food Control 2012, 23:400-404.
4. Chen C.H., Hsieh C.H., Hwang D.F. Species identification of Cyprinidae fish in Taiwan by FINS and PCR-RFLP analysis. Food Control 2012, 28:240-245.
5. Chen I.S., Wu J.H., Hsu C.H. The taxonomy and phylogeny of Candidia (Teleostei: Cyprinidae) from Taiwan, with description of a new species and comments on a new genus. The Raffles Bulletin of Zoology 2008, 19:203-214.
6. Chuang H.Y., Lur H.S., Hwu K.K., Chang M.C. Authentication of domestic Taiwan rice varieties based on fingerprinting analysis of microsatellite DNA markers. Botanical Studies 2011, 52:393-405.
7. ®) improves detection of celery (Apium graveolens L.) and sesame (Sesamum indicum L.) in foods. Food Research International 2010, 43:1237-1243.
8. Comi G., Iacumin L., Rantsiou K., Cantoni C., Cocolin L. Molecular methods for the differentiation of species used in production of cod fish can detect commercial frauds. Food Control 2005, 16:37-42.
9. Dooley J.J., Sage H.D., Brown H.M., Garrett S.D. Improved fish species identification by use of lab-on-a-chip technology. Food Control 2005, 16:601-607.
10. Dooley J.J., Sage H.D., Clarke M.A.L., Brown H.M., Garrett S.D. Fish species identification using PCR-RFLP analysis and lab on a chip capillary electrophoresis: application to detect white fish species in food products and an interlaboratory study. Journal of Agricultural and Food Chemistry 2005, 53:3348-3357.
11. Hsieh H.S., Chai T., Cheng C.A., Hsieh Y.W., Hwang D.F. Application of DNA technique for identifying the species of different processed products of swordfish meat. Journal of Food Science 2004, 69:1-6.
12. Hsieh C.H., Chang W.T., Chang H.C., Hsieh H.S., Chung Y.L., Hwang D.F. Puffer fish-based commercial fraud identification in a segment of cytochrome b region by PCR-RFLP analysis. Food Chemistry 2010, 121:1305-1311.
13. Huang Y.C., Jeng S.S., Chen H.M., Hwang D.F. Identification of nine species of moray eel by SDS-PAGE. The Raffles Bulletin of Zoology 2008, 19:123-129.
14. Infante C., Catanese G., Ponce M., Manchado M. Novel method for the authentication of frigate tunas (Auxis thazard and Auxis rochei) in commercial canned products. Journal of Agricultural and Food Chemistry 2004, 52:7425-7443.
15. Irwin D.M., Kocher T.D., Wilson A.C. Evolution of the cytochrome b gene of mammals. Journal of Molecular Evolution 1991, 32:128-144.
16. Itoi S., Nakaya M., Kaneko G., Kondo H., Sezaki K., Watabe S. Rapid identification of eels Anguilla japonica and Anguilla anguilla by polymerase chain reaction with single nucleotide polymorphism-based specific probes. Fisheries Science 2005, 71:1356-1364.
17. Lemer S., Aurelle D., Vigliola L., Durand J.D., Borsa P. Cytochrome b barcoding, molecular systematics and geographic differentiation in rabbitfishes (Siganidae). Comptes Rendus Biologies 2007, 330:86-94.
18. Mathies R.A., Huang X.C. Capillary array electrophoresis: an approach to high-speed, high-throughput DNA sequencing. Nature 1992, 359:167-169.
19. Pardo M.A., Perez-Villareal B. Identification of commercial canned tuna species by restriction site analysis of mitochondrial DNA products obtained by nested primer PCR. Food Control 2004, 86:143-150.
20. Rehbein H., Kress G., Schmidt T. Application of PCR-SSCP to species identification of fishery products. Journal of the Science of Food and Agriculture 1997, 74:35-41.
21. Trotta M., Schonhuth S., Pepe T., Cortesi M.L., Puyet A., Bautista J.M. Multiplex PCR method for use in real-time PCR for identification of fish fillets from grouper (Epinephelus and Mycteroperca species) and common substitute species. Journal of Agricultural and Food Chemistry 2005, 53:2039-2045.
22. Wang J.P., Hsu K.C., Chiang T.Y. Mitochondrial DNA phylogeography of Acrossocheilus paradoxus (Cyprinidae) in Taiwan. Molecular Ecology 2000, 9:1483-1494.
23. Wang X., Rinehart T.A., Wadl P.A., Spiers J.M., Hadziabdic D., Windham M.T., et al. Anew electrophoresis technique to separate microsatellite alleles. African Journal of Biotechnology 2009, 8:2432-2436.
24. Wen J., Hu C., Zhang L., Luo P., Zhao Z., Fan S., et al. The application of PCR-RFLP and FINS for species identification used in sea cucumbers (Aspidochirotida: Stichopodidae) products from the market. Food Control 2010, 21:403-407.
25. Yan P., Wu X.B., Shi Y., Gu C.M., Wang R.P., Wang C.L. Identification of Chinese alligators (Alligator sinenses) meat by diagnostic PCR of the mitochondrial cytochrome b gene. Conservation Biology 2005, 121:45-51.
26. Zhang J., Huang H., Cai Z., Huang L. Species identification in salted products of red snappers by semi-nested PCR-RFLP based on the mitochondria 12S rRNA gene sequence. Food Control 2007, 18:1331-1336.