-
1
-
-
0019995020
-
The metabolic versatility of pseudomonads
-
10.1007/BF00405197, 6808915
-
Clarke PH. The metabolic versatility of pseudomonads. Antonie Van Leeuwenhoek 1982, 48(2):105-130. 10.1007/BF00405197, 6808915.
-
(1982)
Antonie Van Leeuwenhoek
, vol.48
, Issue.2
, pp. 105-130
-
-
Clarke, P.H.1
-
2
-
-
15944409255
-
Biological control of soil-borne pathogens by fluorescent pseudomonads
-
10.1038/nrmicro1129, 15759041
-
Haas D, Defago G. Biological control of soil-borne pathogens by fluorescent pseudomonads. Nat Rev Microbiol 2005, 3(4):307-319. 10.1038/nrmicro1129, 15759041.
-
(2005)
Nat Rev Microbiol
, vol.3
, Issue.4
, pp. 307-319
-
-
Haas, D.1
Defago, G.2
-
3
-
-
0033671879
-
Root colonization by phenazine-1-carboxamide-producing bacterium Pseudomonas chlororaphis PCL1391 is essential for biocontrol of tomato foot and root rot
-
10.1094/MPMI.2000.13.12.1340, 11106026
-
Chin AWTF, Bloemberg GV, Mulders IH, Dekkers LC, Lugtenberg BJ. Root colonization by phenazine-1-carboxamide-producing bacterium Pseudomonas chlororaphis PCL1391 is essential for biocontrol of tomato foot and root rot. Mol Plant Microbe Interact 2000, 13(12):1340-1345. 10.1094/MPMI.2000.13.12.1340, 11106026.
-
(2000)
Mol Plant Microbe Interact
, vol.13
, Issue.12
, pp. 1340-1345
-
-
Chin, A.W.T.F.1
Bloemberg, G.V.2
Mulders, I.H.3
Dekkers, L.C.4
Lugtenberg, B.J.5
-
4
-
-
0033046834
-
Effect of population density of Pseudomonas fluorescens on production of 2,4-diacetylphloroglucinol in the rhizosphere of wheat
-
10.1094/PHYTO.1999.89.6.470, 18944718
-
Raaijmakers JM, Bonsall RF, Weller DM. Effect of population density of Pseudomonas fluorescens on production of 2,4-diacetylphloroglucinol in the rhizosphere of wheat. Phytopathology 1999, 89(6):470-475. 10.1094/PHYTO.1999.89.6.470, 18944718.
-
(1999)
Phytopathology
, vol.89
, Issue.6
, pp. 470-475
-
-
Raaijmakers, J.M.1
Bonsall, R.F.2
Weller, D.M.3
-
5
-
-
0024058295
-
Role of a phenazine antibiotic from Pseudomonas fluorescens in biological control of Gaeumannomyces graminis var. tritici
-
211320, 2841289
-
Thomashow LS, Weller DM. Role of a phenazine antibiotic from Pseudomonas fluorescens in biological control of Gaeumannomyces graminis var. tritici. J Bacteriol 1988, 170(8):3499-3508. 211320, 2841289.
-
(1988)
J Bacteriol
, vol.170
, Issue.8
, pp. 3499-3508
-
-
Thomashow, L.S.1
Weller, D.M.2
-
6
-
-
39649088425
-
PltR expression modulated by the global regulators GacA, RsmA, LasI and RhlI in Pseudomonas sp. M18
-
10.1016/j.resmic.2007.10.006, 18248796
-
Huang X, Zhang X, Xu Y. PltR expression modulated by the global regulators GacA, RsmA, LasI and RhlI in Pseudomonas sp. M18. Res Microbiol 2008, 159(2):128-136. 10.1016/j.resmic.2007.10.006, 18248796.
-
(2008)
Res Microbiol
, vol.159
, Issue.2
, pp. 128-136
-
-
Huang, X.1
Zhang, X.2
Xu, Y.3
-
7
-
-
33947367822
-
Characterization of a phenazine-producing strain Pseudomonas chlororaphis GP72 with broad-spectrum antifungal activity from green pepper rhizosphere
-
10.1007/s00284-006-0444-4, 17334842
-
Liu H, He Y, Jiang H, Peng H, Huang X, Zhang X, Thomashow LS, Xu Y. Characterization of a phenazine-producing strain Pseudomonas chlororaphis GP72 with broad-spectrum antifungal activity from green pepper rhizosphere. Curr Microbiol 2007, 54(4):302-306. 10.1007/s00284-006-0444-4, 17334842.
-
(2007)
Curr Microbiol
, vol.54
, Issue.4
, pp. 302-306
-
-
Liu, H.1
He, Y.2
Jiang, H.3
Peng, H.4
Huang, X.5
Zhang, X.6
Thomashow, L.S.7
Xu, Y.8
-
8
-
-
0000625019
-
Suppression of Pythium ultimum-induced damping-off of cotton seedlings by Pseudomonas fluorescens and its antibiotic, pyoluteorin
-
Howell CR, Stipanovic RD. Suppression of Pythium ultimum-induced damping-off of cotton seedlings by Pseudomonas fluorescens and its antibiotic, pyoluteorin. Phytopathology 1980, 70:712-715.
-
(1980)
Phytopathology
, vol.70
, pp. 712-715
-
-
Howell, C.R.1
Stipanovic, R.D.2
-
9
-
-
0032936731
-
Characterization of the pyoluteorin biosynthetic gene cluster of Pseudomonas fluorescens Pf-5
-
93630, 10094695
-
Nowak-Thompson B, Chaney N, Wing JS, Gould SJ, Loper JE. Characterization of the pyoluteorin biosynthetic gene cluster of Pseudomonas fluorescens Pf-5. J Bacteriol 1999, 181(7):2166-2174. 93630, 10094695.
-
(1999)
J Bacteriol
, vol.181
, Issue.7
, pp. 2166-2174
-
-
Nowak-Thompson, B.1
Chaney, N.2
Wing, J.S.3
Gould, S.J.4
Loper, J.E.5
-
10
-
-
0030908709
-
Four genes from Pseudomonas fluorescens that encode the biosynthesis of pyrrolnitrin
-
168505, 9172332
-
Hammer PE, Hill DS, Lam ST, Van Pee KH, Ligon JM. Four genes from Pseudomonas fluorescens that encode the biosynthesis of pyrrolnitrin. Appl Environ Microbiol 1997, 63(6):2147-2154. 168505, 9172332.
-
(1997)
Appl Environ Microbiol
, vol.63
, Issue.6
, pp. 2147-2154
-
-
Hammer, P.E.1
Hill, D.S.2
Lam, S.T.3
Van Pee, K.H.4
Ligon, J.M.5
-
11
-
-
0031750270
-
Characterization of the hcnABC gene cluster encoding hydrogen cyanide synthase and anaerobic regulation by ANR in the strictly aerobic biocontrol agent Pseudomonas fluorescens CHA0
-
107821, 9620970
-
Laville J, Blumer C, Von Schroetter C, Gaia V, Defago G, Keel C, Haas D. Characterization of the hcnABC gene cluster encoding hydrogen cyanide synthase and anaerobic regulation by ANR in the strictly aerobic biocontrol agent Pseudomonas fluorescens CHA0. J Bacteriol 1998, 180(12):3187-3196. 107821, 9620970.
-
(1998)
J Bacteriol
, vol.180
, Issue.12
, pp. 3187-3196
-
-
Laville, J.1
Blumer, C.2
Von Schroetter, C.3
Gaia, V.4
Defago, G.5
Keel, C.6
Haas, D.7
-
12
-
-
0011354142
-
Biotechnology of biofertilization and phytostimulation
-
New York: Marcel Dekker, Altman A
-
Okon Y, Bloemberg GV, Lugtenberg BJJ. Biotechnology of biofertilization and phytostimulation. In Agricultural Biotechnology 1998, 327-349. New York: Marcel Dekker, Altman A.
-
(1998)
In Agricultural Biotechnology
, pp. 327-349
-
-
Okon, Y.1
Bloemberg, G.V.2
Lugtenberg, B.J.J.3
-
13
-
-
77957938106
-
Annotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour-inducing pathogen of woody hosts
-
Rodríguez-Palenzuela P, Matas IM, Murillo J, López-Solanilla E, Bardaji L, Pérez-Martínez I, Rodríguez-Moskera ME, Penyalver R, López MM, Quesada JM, Biehl BS, Perna NT, Glasner JD, Cabot EL, Neeno-Eckwall E, Ramos C. Annotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour-inducing pathogen of woody hosts. Environ Microbiol 2010, 12(6):1604-1620.
-
(2010)
Environ Microbiol
, vol.12
, Issue.6
, pp. 1604-1620
-
-
Rodríguez-Palenzuela, P.1
Matas, I.M.2
Murillo, J.3
López-Solanilla, E.4
Bardaji, L.5
Pérez-Martínez, I.6
Rodríguez-Moskera, M.E.7
Penyalver, R.8
López, M.M.9
Quesada, J.M.10
Biehl, B.S.11
Perna, N.T.12
Glasner, J.D.13
Cabot, E.L.14
Neeno-Eckwall, E.15
Ramos, C.16
-
14
-
-
67649653746
-
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens
-
10.1186/gb-2009-10-5-r51, 2718517, 19432983
-
Silby MW, Cerdeño-Tárraga AM, Vernikos GS, Giddens SR, Jackson RW, Preston GM, Zhang X, Moon CD, Gehrig SM, Godfrey SAC, Knight CG, Malone JG, Robinson Z, Spiers AJ, Harris S, Challis GL, Yaxley AM, Harris D, Seeger K, Murphy L, Rutter S, Squares R, Quail MA, Saunders E, Mavromatis K, Brettin TS, Bentley SD, Hothersall J, Stephens E, Thomas CM. Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens. Genome Biol 2009, 10(5):R51. 10.1186/gb-2009-10-5-r51, 2718517, 19432983.
-
(2009)
Genome Biol
, vol.10
, Issue.5
-
-
Silby, M.W.1
Cerdeño-Tárraga, A.M.2
Vernikos, G.S.3
Giddens, S.R.4
Jackson, R.W.5
Preston, G.M.6
Zhang, X.7
Moon, C.D.8
Gehrig, S.M.9
Godfrey, S.A.C.10
Knight, C.G.11
Malone, J.G.12
Robinson, Z.13
Spiers, A.J.14
Harris, S.15
Challis, G.L.16
Yaxley, A.M.17
Harris, D.18
Seeger, K.19
Murphy, L.20
Rutter, S.21
Squares, R.22
Quail, M.A.23
Saunders, E.24
Mavromatis, K.25
Brettin, T.S.26
Bentley, S.D.27
Hothersall, J.28
Stephens, E.29
Thomas, C.M.30
more..
-
15
-
-
79251593648
-
Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida
-
10.1111/j.1574-6976.2010.00249.x, 3056050, 20796030
-
Wu X, Monchy S, Taghavi S, Zhu W, Ramos J, van der Lelie D. Comparative genomics and functional analysis of niche-specific adaptation in Pseudomonas putida. FEMS Microbiol Rev 2011, 35(2):299-323. 10.1111/j.1574-6976.2010.00249.x, 3056050, 20796030.
-
(2011)
FEMS Microbiol Rev
, vol.35
, Issue.2
, pp. 299-323
-
-
Wu, X.1
Monchy, S.2
Taghavi, S.3
Zhu, W.4
Ramos, J.5
van der Lelie, D.6
-
16
-
-
0037464588
-
A vision for the future of genomics research
-
10.1038/nature01626, 12695777
-
Collins FS, Green ED, Guttmacher AE, Guyer MS. A vision for the future of genomics research. Nature 2003, 422(6934):835-847. 10.1038/nature01626, 12695777.
-
(2003)
Nature
, vol.422
, Issue.6934
, pp. 835-847
-
-
Collins, F.S.1
Green, E.D.2
Guttmacher, A.E.3
Guyer, M.S.4
-
17
-
-
23344440104
-
Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5
-
10.1038/nbt1110, 15980861
-
Paulsen IT, Press CM, Ravel J, Kobayashi DY, Myers GSA, Mavrodi DV, DeBoy RT, Seshadri R, Ren Q, Madupu R, Dodson RJ, Durkin AS, Brinkac LM, Daugherty SC, Sullivan SA, Rosovitz MJ, Gwinn ML, Zhou L, Schneider DJ, Cartinhour SW, Nelson WC, Weidman J, Watkins K, Tran K, Khouri H, Pierson EA, Pierson LS, Thomashow LS, Loper JE. Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5. Nat Biotechnol 2005, 23(7):873-878. 10.1038/nbt1110, 15980861.
-
(2005)
Nat Biotechnol
, vol.23
, Issue.7
, pp. 873-878
-
-
Paulsen, I.T.1
Press, C.M.2
Ravel, J.3
Kobayashi, D.Y.4
Myers, G.S.A.5
Mavrodi, D.V.6
DeBoy, R.T.7
Seshadri, R.8
Ren, Q.9
Madupu, R.10
Dodson, R.J.11
Durkin, A.S.12
Brinkac, L.M.13
Daugherty, S.C.14
Sullivan, S.A.15
Rosovitz, M.J.16
Gwinn, M.L.17
Zhou, L.18
Schneider, D.J.19
Cartinhour, S.W.20
Nelson, W.C.21
Weidman, J.22
Watkins, K.23
Tran, K.24
Khouri, H.25
Pierson, E.A.26
Pierson, L.S.27
Thomashow, L.S.28
Loper, J.E.29
more..
-
18
-
-
44949242637
-
Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501
-
10.1073/pnas.0801093105, 2396677, 18495935
-
Yan Y, Yang J, Dou Y, Chen M, Ping S, Peng J, Lu W, Zhang W, Yao Z, Li H, Liu W, He S, Geng L, Zhang X, Yang F, Yu H, Zhan Y, Li D, Lin Z, Wang Y, Elmerich C, Lin M, Jin Q. Nitrogen fixation island and rhizosphere competence traits in the genome of root-associated Pseudomonas stutzeri A1501. Proc Natl Acad Sci U S A 2008, 105(21):7564-7569. 10.1073/pnas.0801093105, 2396677, 18495935.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, Issue.21
, pp. 7564-7569
-
-
Yan, Y.1
Yang, J.2
Dou, Y.3
Chen, M.4
Ping, S.5
Peng, J.6
Lu, W.7
Zhang, W.8
Yao, Z.9
Li, H.10
Liu, W.11
He, S.12
Geng, L.13
Zhang, X.14
Yang, F.15
Yu, H.16
Zhan, Y.17
Li, D.18
Lin, Z.19
Wang, Y.20
Elmerich, C.21
Lin, M.22
Jin, Q.23
more..
-
19
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
10.1046/j.1462-2920.2002.00366.x, 12534463
-
Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VAP, Fouts DE, Gill SR, Pop M, Holmes M, Brinkac L, Beanan M, DeBoy RT, Daugherty S, Kolonay J, Madupu R, Nelson W, White O, Peterson J, Khouri H, Hance I, Chris Lee P, Holtzapple E, Scanlan D, Tran K, Moazzez A, Utterback T, Rizzo M, Lee K, Kosack D. Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 2002, 4(12):799-808. 10.1046/j.1462-2920.2002.00366.x, 12534463.
-
(2002)
Environ Microbiol
, vol.4
, Issue.12
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins dos Santos, V.A.P.6
Fouts, D.E.7
Gill, S.R.8
Pop, M.9
Holmes, M.10
Brinkac, L.11
Beanan, M.12
DeBoy, R.T.13
Daugherty, S.14
Kolonay, J.15
Madupu, R.16
Nelson, W.17
White, O.18
Peterson, J.19
Khouri, H.20
Hance, I.21
Chris Lee, P.22
Holtzapple, E.23
Scanlan, D.24
Tran, K.25
Moazzez, A.26
Utterback, T.27
Rizzo, M.28
Lee, K.29
Kosack, D.30
more..
-
20
-
-
80053604142
-
Complete genome sequence of the nicotine-degrading Pseudomonas putida strain S16
-
10.1128/JB.05663-11, 3187465, 21914868
-
Yu H, Tang H, Wang L, Yao Y, Wu G, Xu P. Complete genome sequence of the nicotine-degrading Pseudomonas putida strain S16. J Bacteriol 2011, 193(19):5541-5542. 10.1128/JB.05663-11, 3187465, 21914868.
-
(2011)
J Bacteriol
, vol.193
, Issue.19
, pp. 5541-5542
-
-
Yu, H.1
Tang, H.2
Wang, L.3
Yao, Y.4
Wu, G.5
Xu, P.6
-
21
-
-
0034739007
-
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
-
10.1038/35023079, 10984043
-
Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S. Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature 2000, 406(6799):959-964. 10.1038/35023079, 10984043.
-
(2000)
Nature
, vol.406
, Issue.6799
, pp. 959-964
-
-
Stover, C.K.1
Pham, X.Q.2
Erwin, A.L.3
Mizoguchi, S.D.4
Warrener, P.5
Hickey, M.J.6
Brinkman, F.S.7
Hufnagle, W.O.8
Kowalik, D.J.9
Lagrou, M.10
Garber, R.L.11
Goltry, L.12
Tolentino, E.13
Westbrock-Wadman, S.14
Yuan, Y.15
Brody, L.L.16
Coulter, S.N.17
Folger, K.R.18
Kas, A.19
Larbig, K.20
Lim, R.21
Smith, K.22
Spencer, D.23
Wong, G.K.24
Wu, Z.25
Paulsen, I.T.26
Reizer, J.27
Saier, M.H.28
Hancock, R.E.29
Lory, S.30
more..
-
22
-
-
80052139487
-
Genomic analysis and temperature-dependent transcriptome profiles of the rhizosphere originating strain Pseudomonas aeruginosa M18
-
10.1186/1471-2164-12-438, 3189399, 21884571
-
Wu D, Ye J, Ou H, Wei X, Huang X, He Y, Xu Y. Genomic analysis and temperature-dependent transcriptome profiles of the rhizosphere originating strain Pseudomonas aeruginosa M18. BMC Genomics 2011, 12(1):438. 10.1186/1471-2164-12-438, 3189399, 21884571.
-
(2011)
BMC Genomics
, vol.12
, Issue.1
, pp. 438
-
-
Wu, D.1
Ye, J.2
Ou, H.3
Wei, X.4
Huang, X.5
He, Y.6
Xu, Y.7
-
23
-
-
0041335630
-
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000
-
10.1073/pnas.1731982100, 193536, 12928499
-
Buell CR, Joardar V, Lindeberg M, Selengut J, Paulsen IT, Gwinn ML, Dodson RJ, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Daugherty S, Brinkac L, Beanan MJ, Haft DH, Nelson WC, Davidsen T, Zafar N, Zhou L, Liu J, Yuan Q, Khouri H, Fedorova N, Tran B, Russell D, Berry K, Utterback T, Van Aken SE, Feldblyum TV, D'Ascenzo M. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proc Natl Acad Sci U S A 2003, 100(18):10181-10186. 10.1073/pnas.1731982100, 193536, 12928499.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, Issue.18
, pp. 10181-10186
-
-
Buell, C.R.1
Joardar, V.2
Lindeberg, M.3
Selengut, J.4
Paulsen, I.T.5
Gwinn, M.L.6
Dodson, R.J.7
Deboy, R.T.8
Durkin, A.S.9
Kolonay, J.F.10
Madupu, R.11
Daugherty, S.12
Brinkac, L.13
Beanan, M.J.14
Haft, D.H.15
Nelson, W.C.16
Davidsen, T.17
Zafar, N.18
Zhou, L.19
Liu, J.20
Yuan, Q.21
Khouri, H.22
Fedorova, N.23
Tran, B.24
Russell, D.25
Berry, K.26
Utterback, T.27
Van Aken, S.E.28
Feldblyum, T.V.29
D'Ascenzo, M.30
more..
-
24
-
-
33745087804
-
Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila
-
10.1038/nbt1212, 16699499
-
Vodovar N, Vallenet D, Cruveiller S, Rouy Z, Barbe V, Acosta C, Cattolico L, Jubin C, Lajus A, Segurens B, Vacherie B, Wincker P, Weissenbach J, Lemaitre B, Medigue C, Boccard F. Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila. Nat Biotechnol 2006, 24(6):673-679. 10.1038/nbt1212, 16699499.
-
(2006)
Nat Biotechnol
, vol.24
, Issue.6
, pp. 673-679
-
-
Vodovar, N.1
Vallenet, D.2
Cruveiller, S.3
Rouy, Z.4
Barbe, V.5
Acosta, C.6
Cattolico, L.7
Jubin, C.8
Lajus, A.9
Segurens, B.10
Vacherie, B.11
Wincker, P.12
Weissenbach, J.13
Lemaitre, B.14
Medigue, C.15
Boccard, F.16
-
25
-
-
48349144931
-
Phenazine-1-carboxylic acid biosynthesis in Pseudomonas chlororaphis GP72 is positively regulated by the sigma factor RpoN
-
Liu H, Yan A, Zhang X, Xu Y. Phenazine-1-carboxylic acid biosynthesis in Pseudomonas chlororaphis GP72 is positively regulated by the sigma factor RpoN. World J Microbiol Biotechnol 2008, 24(9):1961-1966.
-
(2008)
World J Microbiol Biotechnol
, vol.24
, Issue.9
, pp. 1961-1966
-
-
Liu, H.1
Yan, A.2
Zhang, X.3
Xu, Y.4
-
26
-
-
41949095282
-
Altering the ratio of phenazines in Pseudomonas chlororaphis (aureofaciens) strain 30-84: effects on biofilm formation and pathogen inhibition
-
10.1128/JB.01587-07, 2293254, 18263718
-
Maddula VSRK, Pierson EA, Pierson LS. Altering the ratio of phenazines in Pseudomonas chlororaphis (aureofaciens) strain 30-84: effects on biofilm formation and pathogen inhibition. J Bacteriol 2008, 190(8):2759-2766. 10.1128/JB.01587-07, 2293254, 18263718.
-
(2008)
J Bacteriol
, vol.190
, Issue.8
, pp. 2759-2766
-
-
Maddula, V.S.R.K.1
Pierson, E.A.2
Pierson, L.S.3
-
27
-
-
0344284610
-
Induced defence in tobacco by Pseudomonas chlororaphis strain O6 involves at least the ethylene pathway
-
Spencer M, Ryu CM, Yang KY, Kim YC, Kloepper JW, Anderson AJ. Induced defence in tobacco by Pseudomonas chlororaphis strain O6 involves at least the ethylene pathway. Physiol Molec Plant Pathol 2003, 63(1):27-34.
-
(2003)
Physiol Molec Plant Pathol
, vol.63
, Issue.1
, pp. 27-34
-
-
Spencer, M.1
Ryu, C.M.2
Yang, K.Y.3
Kim, Y.C.4
Kloepper, J.W.5
Anderson, A.J.6
-
28
-
-
84863295241
-
Genome sequence of Pseudomonas chlororaphis GP72, a root-colonizing biocontrol strain
-
10.1128/JB.06713-11, 3294805, 22328763
-
Shen X, Chen M, Hu H, Wang W, Peng H, Xu P, Zhang X. Genome sequence of Pseudomonas chlororaphis GP72, a root-colonizing biocontrol strain. J Bacteriol 2012, 194(5):1269-1270. 10.1128/JB.06713-11, 3294805, 22328763.
-
(2012)
J Bacteriol
, vol.194
, Issue.5
, pp. 1269-1270
-
-
Shen, X.1
Chen, M.2
Hu, H.3
Wang, W.4
Peng, H.5
Xu, P.6
Zhang, X.7
-
29
-
-
32344451280
-
Genetic diversity of phenazine- and pyoluteorin-producing pseudomonads isolated from green pepper rhizosphere
-
10.1007/s00203-005-0072-6, 16395554
-
Liu H, Dong D, Peng H, Zhang X, Xu Y. Genetic diversity of phenazine- and pyoluteorin-producing pseudomonads isolated from green pepper rhizosphere. Arch Microbiol 2006, 185(2):91-98. 10.1007/s00203-005-0072-6, 16395554.
-
(2006)
Arch Microbiol
, vol.185
, Issue.2
, pp. 91-98
-
-
Liu, H.1
Dong, D.2
Peng, H.3
Zhang, X.4
Xu, Y.5
-
30
-
-
78651064514
-
Enhanced production of 2-hydroxyphenazine in Pseudomonas chlororaphis GP72
-
Huang L, Chen M, Wang W, Hu H, Peng H, Xu Y, Zhang X. Enhanced production of 2-hydroxyphenazine in Pseudomonas chlororaphis GP72. Eur J Appl Microbiol Biotech 2010, 89(1):169-177.
-
(2010)
Eur J Appl Microbiol Biotech
, vol.89
, Issue.1
, pp. 169-177
-
-
Huang, L.1
Chen, M.2
Wang, W.3
Hu, H.4
Peng, H.5
Xu, Y.6
Zhang, X.7
-
31
-
-
0000625018
-
Control of Rhizoctonia solani on cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium
-
Howell C, Stipanovic R. Control of Rhizoctonia solani on cotton seedlings with Pseudomonas fluorescens and with an antibiotic produced by the bacterium. Phytopathology 1979, 69(5):480-482.
-
(1979)
Phytopathology
, vol.69
, Issue.5
, pp. 480-482
-
-
Howell, C.1
Stipanovic, R.2
-
32
-
-
3242784128
-
Phenazine-1-carboxylic acid is negatively regulated and pyoluteorin positively regulated by gacA in Pseudomonas sp. M18
-
10.1111/j.1574-6968.2004.tb09676.x, 15268936
-
Ge Y, Huang X, Wang S, Zhang X, Xu Y. Phenazine-1-carboxylic acid is negatively regulated and pyoluteorin positively regulated by gacA in Pseudomonas sp. M18. FEMS Microbiol Lett 2004, 237(1):41-47. 10.1111/j.1574-6968.2004.tb09676.x, 15268936.
-
(2004)
FEMS Microbiol Lett
, vol.237
, Issue.1
, pp. 41-47
-
-
Ge, Y.1
Huang, X.2
Wang, S.3
Zhang, X.4
Xu, Y.5
-
33
-
-
70349901073
-
Temperature-dependent expression of phzM and its regulatory genes lasI and ptsP in rhizosphere isolate Pseudomonas sp. strain M18
-
10.1128/AEM.01148-09, 2765144, 19717631
-
Huang J, Xu Y, Zhang H, Li Y, Huang X, Ren B, Zhang X. Temperature-dependent expression of phzM and its regulatory genes lasI and ptsP in rhizosphere isolate Pseudomonas sp. strain M18. Appl Environ Microbiol 2009, 75(20):6568-6580. 10.1128/AEM.01148-09, 2765144, 19717631.
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.20
, pp. 6568-6580
-
-
Huang, J.1
Xu, Y.2
Zhang, H.3
Li, Y.4
Huang, X.5
Ren, B.6
Zhang, X.7
-
34
-
-
0035685204
-
Functional analysis of genes for biosynthesis of pyocyanin and phenazine-1-carboxamide from Pseudomonas aeruginosa PAO1
-
10.1128/JB.183.21.6454-6465.2001, 100142, 11591691
-
Mavrodi DV, Bonsall RF, Delaney SM, Soule MJ, Phillips G, Thomashow LS. Functional analysis of genes for biosynthesis of pyocyanin and phenazine-1-carboxamide from Pseudomonas aeruginosa PAO1. J Bacteriol 2001, 183(21):6454-6465. 10.1128/JB.183.21.6454-6465.2001, 100142, 11591691.
-
(2001)
J Bacteriol
, vol.183
, Issue.21
, pp. 6454-6465
-
-
Mavrodi, D.V.1
Bonsall, R.F.2
Delaney, S.M.3
Soule, M.J.4
Phillips, G.5
Thomashow, L.S.6
-
35
-
-
58149389286
-
Pseudomonas aeruginosa-Candida albicans interactions: localization and fungal toxicity of a phenazine derivative
-
10.1128/AEM.01037-08, 2620721, 19011064
-
Gibson J, Sood A, Hogan DA. Pseudomonas aeruginosa-Candida albicans interactions: localization and fungal toxicity of a phenazine derivative. Appl Environ Microbiol 2009, 75(2):504-513. 10.1128/AEM.01037-08, 2620721, 19011064.
-
(2009)
Appl Environ Microbiol
, vol.75
, Issue.2
, pp. 504-513
-
-
Gibson, J.1
Sood, A.2
Hogan, D.A.3
-
36
-
-
45149086540
-
Investigation of dinitrogen fixation bacteria isolated from rice rhizosphere
-
Qiu Y, Mo X, You C, Wang D. Investigation of dinitrogen fixation bacteria isolated from rice rhizosphere. Chinese Sc bull (kexuetongbao) 1981, 26(26):383-384.
-
(1981)
Chinese Sc bull (kexuetongbao)
, vol.26
, Issue.26
, pp. 383-384
-
-
Qiu, Y.1
Mo, X.2
You, C.3
Wang, D.4
-
37
-
-
0033037891
-
The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri
-
10.1016/S0723-2020(99)80068-X, 10390872
-
Vermeiren H, Willems A, Schoofs G, de Mot R, Keijers V, Hai W, Vanderleyden J. The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri. Syst Appl Microbiol 1999, 22(2):215-224. 10.1016/S0723-2020(99)80068-X, 10390872.
-
(1999)
Syst Appl Microbiol
, vol.22
, Issue.2
, pp. 215-224
-
-
Vermeiren, H.1
Willems, A.2
Schoofs, G.3
de Mot, R.4
Keijers, V.5
Hai, W.6
Vanderleyden, J.7
-
38
-
-
77649257031
-
Genome-wide investigation and functional characterization of the beta-ketoadipate pathway in the nitrogen-fixing and root-associated bacterium Pseudomonas stutzeri A1501
-
10.1186/1471-2180-10-36, 2907835, 20137101
-
Li D, Yan Y, Ping S, Chen M, Zhang W, Li L, Lin W, Geng L, Liu W, Lu W, Lin M. Genome-wide investigation and functional characterization of the beta-ketoadipate pathway in the nitrogen-fixing and root-associated bacterium Pseudomonas stutzeri A1501. BMC Microbiol 2010, 10(1):36. 10.1186/1471-2180-10-36, 2907835, 20137101.
-
(2010)
BMC Microbiol
, vol.10
, Issue.1
, pp. 36
-
-
Li, D.1
Yan, Y.2
Ping, S.3
Chen, M.4
Zhang, W.5
Li, L.6
Lin, W.7
Geng, L.8
Liu, W.9
Lu, W.10
Lin, M.11
-
39
-
-
33644873697
-
The integrated microbial genomes (IMG) system
-
Markowitz VM, Korzeniewski F, Palaniappan K, Szeto E, Werner G, Padki A, Zhao X, Dubchak I, Hugenholtz P, Anderson I, Lykidis A, Mavromatis K, Ivanova N, Kyrpides NC. The integrated microbial genomes (IMG) system. Nucleic Acids Res 2006, 34(Database issue):344-348.
-
(2006)
Nucleic Acids Res
, vol.34
, Issue.DATABASE ISSUE
, pp. 344-348
-
-
Markowitz, V.M.1
Korzeniewski, F.2
Palaniappan, K.3
Szeto, E.4
Werner, G.5
Padki, A.6
Zhao, X.7
Dubchak, I.8
Hugenholtz, P.9
Anderson, I.10
Lykidis, A.11
Mavromatis, K.12
Ivanova, N.13
Kyrpides, N.C.14
-
40
-
-
0035162592
-
The COG database: new developments in phylogenetic classification of proteins from complete genomes
-
10.1093/nar/29.1.22, 29819, 11125040
-
Tatusov RL, Natale DA, Garkavtsev IV, Tatusova TA, Shankavaram UT, Rao BS, Kiryutin B, Galperin MY, Fedorova ND, Koonin EV. The COG database: new developments in phylogenetic classification of proteins from complete genomes. Nucleic Acids Res 2001, 29(1):22-28. 10.1093/nar/29.1.22, 29819, 11125040.
-
(2001)
Nucleic Acids Res
, vol.29
, Issue.1
, pp. 22-28
-
-
Tatusov, R.L.1
Natale, D.A.2
Garkavtsev, I.V.3
Tatusova, T.A.4
Shankavaram, U.T.5
Rao, B.S.6
Kiryutin, B.7
Galperin, M.Y.8
Fedorova, N.D.9
Koonin, E.V.10
-
41
-
-
24044433279
-
ACT: the Artemis Comparison Tool
-
10.1093/bioinformatics/bti553, 15976072
-
Carver TJ, Rutherford KM, Berriman M, Rajandream MA, Barrell BG, Parkhill J. ACT: the Artemis Comparison Tool. Bioinformatics 2005, 21(16):3422-3423. 10.1093/bioinformatics/bti553, 15976072.
-
(2005)
Bioinformatics
, vol.21
, Issue.16
, pp. 3422-3423
-
-
Carver, T.J.1
Rutherford, K.M.2
Berriman, M.3
Rajandream, M.A.4
Barrell, B.G.5
Parkhill, J.6
-
42
-
-
42149162147
-
The genome BLASTatlas - a GeneWiz extension for visualization of whole-genome homology
-
10.1039/b717118h, 18414733
-
Hallin PF, Binnewies TT, Ussery DW. The genome BLASTatlas - a GeneWiz extension for visualization of whole-genome homology. Mol Biosyst 2008, 4(5):363-371. 10.1039/b717118h, 18414733.
-
(2008)
Mol Biosyst
, vol.4
, Issue.5
, pp. 363-371
-
-
Hallin, P.F.1
Binnewies, T.T.2
Ussery, D.W.3
-
43
-
-
77954265673
-
MGenomeSubtractor: a web-based tool for parallel in silico subtractive hybridization analysis of multiple bacterial genomes
-
Shao Y, He X, Harrison EM, Tai C, Ou HY, Rajakumar K, Deng Z. mGenomeSubtractor: a web-based tool for parallel in silico subtractive hybridization analysis of multiple bacterial genomes. Nucleic Acids Res 2010, 38(Web Server issue):194-200.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.WEB SERVER ISSUE
, pp. 194-200
-
-
Shao, Y.1
He, X.2
Harrison, E.M.3
Tai, C.4
Ou, H.Y.5
Rajakumar, K.6
Deng, Z.7
-
44
-
-
0021119496
-
Alternative pathways of carbohydrate utilization in pseudomonads
-
10.1146/annurev.mi.38.100184.002043, 6388497
-
Lessie TG, Phibbs PV. Alternative pathways of carbohydrate utilization in pseudomonads. Annu Rev Microbiol 1984, 38:359-388. 10.1146/annurev.mi.38.100184.002043, 6388497.
-
(1984)
Annu Rev Microbiol
, vol.38
, pp. 359-388
-
-
Lessie, T.G.1
Phibbs, P.V.2
-
45
-
-
0016290249
-
Genetical analysis of fructose utilization by Escherichia coli
-
10.1098/rspb.1974.0066, 4154035
-
Jones-Mortimer MC, Kornberg HL. Genetical analysis of fructose utilization by Escherichia coli. Proc R Soc Lond B Biol Sci 1974, 187(1087):121-131. 10.1098/rspb.1974.0066, 4154035.
-
(1974)
Proc R Soc Lond B Biol Sci
, vol.187
, Issue.1087
, pp. 121-131
-
-
Jones-Mortimer, M.C.1
Kornberg, H.L.2
-
46
-
-
0006899947
-
Plant root exudates
-
Rovira AD. Plant root exudates. Bot Rev 1969, 35:35-57.
-
(1969)
Bot Rev
, vol.35
, pp. 35-57
-
-
Rovira, A.D.1
-
47
-
-
33745942317
-
The role of root exudates in rhizosphere interactions with plants and other organisms
-
10.1146/annurev.arplant.57.032905.105159, 16669762
-
Bais HP, Weir TL, Perry LG, Gilroy S, Vivanco JM. The role of root exudates in rhizosphere interactions with plants and other organisms. Annu Rev Plant Biol 2006, 57:233-266. 10.1146/annurev.arplant.57.032905.105159, 16669762.
-
(2006)
Annu Rev Plant Biol
, vol.57
, pp. 233-266
-
-
Bais, H.P.1
Weir, T.L.2
Perry, L.G.3
Gilroy, S.4
Vivanco, J.M.5
-
48
-
-
0034029015
-
Aromatic hydrocarbon dioxygenases in environmental biotechnology
-
10.1016/S0958-1669(00)00090-2, 10851146
-
Gibson DT, Parales RE. Aromatic hydrocarbon dioxygenases in environmental biotechnology. Curr Opin Biotechnol 2000, 11(3):236-243. 10.1016/S0958-1669(00)00090-2, 10851146.
-
(2000)
Curr Opin Biotechnol
, vol.11
, Issue.3
, pp. 236-243
-
-
Gibson, D.T.1
Parales, R.E.2
-
49
-
-
75549089640
-
The University of Minnesota biocatalysis/biodegradation database: improving public access
-
2810998, 19906698
-
Gao J, Ellis LB, Wackett LP. The University of Minnesota biocatalysis/biodegradation database: improving public access. Nucleic Acids Res 2010, 38(Database issue):488-491. 2810998, 19906698.
-
(2010)
Nucleic Acids Res
, vol.38
, Issue.DATABASE ISSUE
, pp. 488-491
-
-
Gao, J.1
Ellis, L.B.2
Wackett, L.P.3
-
50
-
-
0015190808
-
Catabolism of aromatic compounds by micro-organisms
-
Dagley S. Catabolism of aromatic compounds by micro-organisms. Adv Microb Physiol 1971, 6:1-46.
-
(1971)
Adv Microb Physiol
, vol.6
, pp. 1-46
-
-
Dagley, S.1
-
51
-
-
0036933805
-
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440
-
10.1046/j.1462-2920.2002.00370.x, 12534466
-
Jimenez JI, Minambres B, Garcia JL, Diaz E. Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440. Environ Microbiol 2002, 4(12):824-841. 10.1046/j.1462-2920.2002.00370.x, 12534466.
-
(2002)
Environ Microbiol
, vol.4
, Issue.12
, pp. 824-841
-
-
Jimenez, J.I.1
Minambres, B.2
Garcia, J.L.3
Diaz, E.4
-
52
-
-
0029795374
-
The beta-ketoadipate pathway and the biology of self-identity
-
10.1146/annurev.micro.50.1.553, 8905091
-
Harwood CS, Parales RE. The beta-ketoadipate pathway and the biology of self-identity. Annu Rev Microbiol 1996, 50:553-590. 10.1146/annurev.micro.50.1.553, 8905091.
-
(1996)
Annu Rev Microbiol
, vol.50
, pp. 553-590
-
-
Harwood, C.S.1
Parales, R.E.2
-
53
-
-
0142226990
-
Aerobic tryptophan degradation pathway in bacteria: novel kynurenine formamidase
-
10.1016/S0378-1097(03)00684-0, 14592712
-
Kurnasov O, Jablonski L, Polanuyer B, Dorrestein P, Begley T, Osterman A. Aerobic tryptophan degradation pathway in bacteria: novel kynurenine formamidase. FEMS Microbiol Lett 2003, 227(2):219-227. 10.1016/S0378-1097(03)00684-0, 14592712.
-
(2003)
FEMS Microbiol Lett
, vol.227
, Issue.2
, pp. 219-227
-
-
Kurnasov, O.1
Jablonski, L.2
Polanuyer, B.3
Dorrestein, P.4
Begley, T.5
Osterman, A.6
-
54
-
-
0026017943
-
Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1, 2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases
-
208249, 1885518
-
Neidle E, Hartnett C, Ornston L, Bairoch A, Rekik M, Harayama S. Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1, 2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases. J Bacteriol 1991, 173(17):5385-5395. 208249, 1885518.
-
(1991)
J Bacteriol
, vol.173
, Issue.17
, pp. 5385-5395
-
-
Neidle, E.1
Hartnett, C.2
Ornston, L.3
Bairoch, A.4
Rekik, M.5
Harayama, S.6
-
55
-
-
0035544025
-
Purification and characterization of a salicylate hydroxylase involved in 1-hydroxy-2-naphthoic acid hydroxylation from the naphthalene and phenanthrene-degrading bacterial strain Pseudomonas putida BS202-P1
-
10.1023/A:1013126723719, 11826899
-
Balashova NV, Stolz A, Knackmuss HJ, Kosheleva IA, Naumov AV, Boronin AM. Purification and characterization of a salicylate hydroxylase involved in 1-hydroxy-2-naphthoic acid hydroxylation from the naphthalene and phenanthrene-degrading bacterial strain Pseudomonas putida BS202-P1. Biodegradation 2001, 12(3):179-188. 10.1023/A:1013126723719, 11826899.
-
(2001)
Biodegradation
, vol.12
, Issue.3
, pp. 179-188
-
-
Balashova, N.V.1
Stolz, A.2
Knackmuss, H.J.3
Kosheleva, I.A.4
Naumov, A.V.5
Boronin, A.M.6
-
56
-
-
0027466130
-
Purification and properties of the physically associated meta-cleavage pathway enzymes 4-hydroxy-2-ketovalerate aldolase and aldehyde dehydrogenase (acylating) from Pseudomonas sp. strain CF600
-
196151, 8419288
-
Powlowski J, Sahlman L, Shingler V. Purification and properties of the physically associated meta-cleavage pathway enzymes 4-hydroxy-2-ketovalerate aldolase and aldehyde dehydrogenase (acylating) from Pseudomonas sp. strain CF600. J Bacteriol 1993, 175(2):377-385. 196151, 8419288.
-
(1993)
J Bacteriol
, vol.175
, Issue.2
, pp. 377-385
-
-
Powlowski, J.1
Sahlman, L.2
Shingler, V.3
-
57
-
-
33745219445
-
Coupled expression of MhpE aldolase and MhpF dehydrogenase in Escherichia coli
-
10.1016/j.bbrc.2006.06.009, 16782065
-
Lee SJ, Ko JH, Kang HY, Lee Y. Coupled expression of MhpE aldolase and MhpF dehydrogenase in Escherichia coli. Biochem Biophys Res Commun 2006, 346(3):1009-1015. 10.1016/j.bbrc.2006.06.009, 16782065.
-
(2006)
Biochem Biophys Res Commun
, vol.346
, Issue.3
, pp. 1009-1015
-
-
Lee, S.J.1
Ko, J.H.2
Kang, H.Y.3
Lee, Y.4
-
58
-
-
0028172818
-
Identification of the pcaRKF gene cluster from Pseudomonas putida: involvement in chemotaxis, biodegradation, and transport of 4-hydroxybenzoate
-
197001, 7961399
-
Harwood CS, Nichols NN, Kim MK, Ditty JL, Parales RE. Identification of the pcaRKF gene cluster from Pseudomonas putida: involvement in chemotaxis, biodegradation, and transport of 4-hydroxybenzoate. J Bacteriol 1994, 176(21):6479-6488. 197001, 7961399.
-
(1994)
J Bacteriol
, vol.176
, Issue.21
, pp. 6479-6488
-
-
Harwood, C.S.1
Nichols, N.N.2
Kim, M.K.3
Ditty, J.L.4
Parales, R.E.5
-
59
-
-
0030981938
-
Molecular characterization of genes of Pseudomonas sp. strain HR199 involved in bioconversion of vanillin to protocatechuate
-
179009, 9098058
-
Priefert H, Rabenhorst J, Steinbuchel A. Molecular characterization of genes of Pseudomonas sp. strain HR199 involved in bioconversion of vanillin to protocatechuate. J Bacteriol 1997, 179(8):2595-2607. 179009, 9098058.
-
(1997)
J Bacteriol
, vol.179
, Issue.8
, pp. 2595-2607
-
-
Priefert, H.1
Rabenhorst, J.2
Steinbuchel, A.3
-
60
-
-
3142723615
-
3-Dehydroquinate production by oxidative fermentation and further conversion of 3-dehydroquinate to the intermediates in the shikimate pathway
-
10.1271/bbb.67.2124, 14586099
-
Adachi O, Tanasupawat S, Yoshihara N, Toyama H, Matsushita K. 3-Dehydroquinate production by oxidative fermentation and further conversion of 3-dehydroquinate to the intermediates in the shikimate pathway. Biosci Biotechnol Biochem 2003, 67(10):2124-2131. 10.1271/bbb.67.2124, 14586099.
-
(2003)
Biosci Biotechnol Biochem
, vol.67
, Issue.10
, pp. 2124-2131
-
-
Adachi, O.1
Tanasupawat, S.2
Yoshihara, N.3
Toyama, H.4
Matsushita, K.5
-
62
-
-
0025117531
-
Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: interchangeability of the two anthranilate synthases and evolutionary implications
-
208517, 2153661
-
Essar DW, Eberly L, Hadero A, Crawford IP. Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: interchangeability of the two anthranilate synthases and evolutionary implications. J Bacteriol 1990, 172(2):884-900. 208517, 2153661.
-
(1990)
J Bacteriol
, vol.172
, Issue.2
, pp. 884-900
-
-
Essar, D.W.1
Eberly, L.2
Hadero, A.3
Crawford, I.P.4
-
63
-
-
0347721776
-
Biosynthesis of the enediyne antitumor antibiotic C-1027
-
10.1126/science.1072110, 12183628
-
Liu W, Christenson SD, Standage S, Shen B. Biosynthesis of the enediyne antitumor antibiotic C-1027. Science 2002, 297(5584):1170-1173. 10.1126/science.1072110, 12183628.
-
(2002)
Science
, vol.297
, Issue.5584
, pp. 1170-1173
-
-
Liu, W.1
Christenson, S.D.2
Standage, S.3
Shen, B.4
-
64
-
-
0033566995
-
Crystal structure of Pseudomonas fluorescens 4-hydroxyphenylpyruvate dioxygenase: an enzyme involved in the tyrosine degradation pathway
-
10.1016/S0969-2126(99)80124-5, 10467142
-
Serre L, Sailland A, Sy D, Boudec P, Rolland A, Pebay-Peyroula E, Cohen-Addad C. Crystal structure of Pseudomonas fluorescens 4-hydroxyphenylpyruvate dioxygenase: an enzyme involved in the tyrosine degradation pathway. Structure 1999, 7(8):977-988. 10.1016/S0969-2126(99)80124-5, 10467142.
-
(1999)
Structure
, vol.7
, Issue.8
, pp. 977-988
-
-
Serre, L.1
Sailland, A.2
Sy, D.3
Boudec, P.4
Rolland, A.5
Pebay-Peyroula, E.6
Cohen-Addad, C.7
-
65
-
-
3242813728
-
The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida
-
10.1128/JB.186.15.5062-5077.2004, 451635, 15262943
-
Arias-Barrau E, Olivera ER, Luengo JM, Fernández C, Galán B, García JL, Díaz E, Miñambres B. The homogentisate pathway: a central catabolic pathway involved in the degradation of L-phenylalanine, L-tyrosine, and 3-hydroxyphenylacetate in Pseudomonas putida. J Bacteriol 2004, 186(15):5062-5077. 10.1128/JB.186.15.5062-5077.2004, 451635, 15262943.
-
(2004)
J Bacteriol
, vol.186
, Issue.15
, pp. 5062-5077
-
-
Arias-Barrau, E.1
Olivera, E.R.2
Luengo, J.M.3
Fernández, C.4
Galán, B.5
García, J.L.6
Díaz, E.7
Miñambres, B.8
-
66
-
-
0017087124
-
Catabolism of L-tyrosine by the homoprotocatechuate pathway in Gram-positive bacteria
-
233070, 931949
-
Sparnins VL, Chapman PJ. Catabolism of L-tyrosine by the homoprotocatechuate pathway in Gram-positive bacteria. J Bacteriol 1976, 127(1):362-366. 233070, 931949.
-
(1976)
J Bacteriol
, vol.127
, Issue.1
, pp. 362-366
-
-
Sparnins, V.L.1
Chapman, P.J.2
-
67
-
-
0019852736
-
Control of meta-cleavage degradation of 4-hydroxyphenylacetate in Pseudomonas putida
-
216120, 6895079
-
Barbour MG, Bayly RC. Control of meta-cleavage degradation of 4-hydroxyphenylacetate in Pseudomonas putida. J Bacteriol 1981, 147(3):844-850. 216120, 6895079.
-
(1981)
J Bacteriol
, vol.147
, Issue.3
, pp. 844-850
-
-
Barbour, M.G.1
Bayly, R.C.2
-
68
-
-
0025115933
-
Subcloning and nucleotide sequence of the 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase gene from Escherichia coli C
-
Roper DI, Cooper RA. Subcloning and nucleotide sequence of the 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase gene from Escherichia coli C. FEBS Lett 1990, 275(1-2):53-57.
-
(1990)
FEBS Lett
, vol.275
, Issue.1-2
, pp. 53-57
-
-
Roper, D.I.1
Cooper, R.A.2
-
69
-
-
0028180369
-
3, 4-Dihydroxyphenylacetate 2, 3-dioxygenase from Klebsiella pneumoniae, a Mg (2+)-containing dioxygenase involved in aromatic catabolism
-
1137154, 8037662
-
Gibello A, Ferrer E, Martin M, Garrido-Pertierra A. 3, 4-Dihydroxyphenylacetate 2, 3-dioxygenase from Klebsiella pneumoniae, a Mg (2+)-containing dioxygenase involved in aromatic catabolism. Biochem J 1994, 301(Pt 1):145. 1137154, 8037662.
-
(1994)
Biochem J
, vol.301
, Issue.PART 1
, pp. 145
-
-
Gibello, A.1
Ferrer, E.2
Martin, M.3
Garrido-Pertierra, A.4
-
70
-
-
1642264726
-
Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases
-
10.1128/JB.186.7.1945-1958.2004, 374394, 15028678
-
Vetting MW, Wackett LP, Que L, Lipscomb JD, Ohlendorf DH. Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases. J Bacteriol 2004, 186(7):1945-1958. 10.1128/JB.186.7.1945-1958.2004, 374394, 15028678.
-
(2004)
J Bacteriol
, vol.186
, Issue.7
, pp. 1945-1958
-
-
Vetting, M.W.1
Wackett, L.P.2
Que, L.3
Lipscomb, J.D.4
Ohlendorf, D.H.5
-
71
-
-
57049146277
-
Mechanism of extradiol aromatic ring-cleaving dioxygenases
-
10.1016/j.sbi.2008.11.001, 2614828, 19007887
-
Lipscomb JD. Mechanism of extradiol aromatic ring-cleaving dioxygenases. Curr Opin Struct Biol 2008, 18(6):644-649. 10.1016/j.sbi.2008.11.001, 2614828, 19007887.
-
(2008)
Curr Opin Struct Biol
, vol.18
, Issue.6
, pp. 644-649
-
-
Lipscomb, J.D.1
-
72
-
-
0031042775
-
2-Phenylethylamine catabolism by Escherichia coli K-12: gene organization and expression
-
10.1099/00221287-143-2-513, 9043126
-
Hanlon SP, Hill TK, Flavell MA, Stringfellow JM, Cooper RA. 2-Phenylethylamine catabolism by Escherichia coli K-12: gene organization and expression. Microbiology 1997, 143:513-518. 10.1099/00221287-143-2-513, 9043126.
-
(1997)
Microbiology
, vol.143
, pp. 513-518
-
-
Hanlon, S.P.1
Hill, T.K.2
Flavell, M.A.3
Stringfellow, J.M.4
Cooper, R.A.5
-
73
-
-
0141765938
-
Chemical and kinetic reaction mechanisms of quinohemoprotein amine dehydrogenase from Paracoccus denitrificans
-
10.1021/bi035062r, 12974623
-
Sun D, Ono K, Okajima T, Tanizawa K, Uchida M, Yamamoto Y, Mathews FS, Davidson VL. Chemical and kinetic reaction mechanisms of quinohemoprotein amine dehydrogenase from Paracoccus denitrificans. Biochemistry 2003, 42(37):10896-10903. 10.1021/bi035062r, 12974623.
-
(2003)
Biochemistry
, vol.42
, Issue.37
, pp. 10896-10903
-
-
Sun, D.1
Ono, K.2
Okajima, T.3
Tanizawa, K.4
Uchida, M.5
Yamamoto, Y.6
Mathews, F.S.7
Davidson, V.L.8
-
74
-
-
38049103665
-
Genetic analyses and molecular characterization of the pathways involved in the conversion of 2-phenylethylamine and 2-phenylethanol into phenylacetic acid in Pseudomonas putida U
-
10.1111/j.1462-2920.2007.01464.x, 18177365
-
Arias S, Olivera ER, Arcos M, Naharro G, Luengo JM. Genetic analyses and molecular characterization of the pathways involved in the conversion of 2-phenylethylamine and 2-phenylethanol into phenylacetic acid in Pseudomonas putida U. Environ Microbiol 2008, 10(2):413-432. 10.1111/j.1462-2920.2007.01464.x, 18177365.
-
(2008)
Environ Microbiol
, vol.10
, Issue.2
, pp. 413-432
-
-
Arias, S.1
Olivera, E.R.2
Arcos, M.3
Naharro, G.4
Luengo, J.M.5
-
75
-
-
0032568611
-
Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon
-
10.1073/pnas.95.11.6419, 27761, 9600981
-
Olivera ER, Minambres B, Garcia B, Muniz C, Moreno MA, Ferrandez A, Diaz E, Garcia JL, Luengo JM. Molecular characterization of the phenylacetic acid catabolic pathway in Pseudomonas putida U: the phenylacetyl-CoA catabolon. Proc Natl Acad Sci U S A 1998, 95(11):6419-6424. 10.1073/pnas.95.11.6419, 27761, 9600981.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, Issue.11
, pp. 6419-6424
-
-
Olivera, E.R.1
Minambres, B.2
Garcia, B.3
Muniz, C.4
Moreno, M.A.5
Ferrandez, A.6
Diaz, E.7
Garcia, J.L.8
Luengo, J.M.9
-
76
-
-
0035057115
-
The phenylacetyl-CoA catabolon: a complex catabolic unit with broad biotechnological applications
-
10.1046/j.1365-2958.2001.02344.x, 11260461
-
Luengo JM, Garcia JL, Olivera ER. The phenylacetyl-CoA catabolon: a complex catabolic unit with broad biotechnological applications. Mol Microbiol 2001, 39(6):1434-1442. 10.1046/j.1365-2958.2001.02344.x, 11260461.
-
(2001)
Mol Microbiol
, vol.39
, Issue.6
, pp. 1434-1442
-
-
Luengo, J.M.1
Garcia, J.L.2
Olivera, E.R.3
-
77
-
-
84920189466
-
Aromatic ring hydroxylating dioxygenases
-
Parales RE, Resnick SM. Aromatic ring hydroxylating dioxygenases. Pseudomonas 2006, 287:287-340.
-
(2006)
Pseudomonas
, vol.287
, pp. 287-340
-
-
Parales, R.E.1
Resnick, S.M.2
-
78
-
-
0344152353
-
The role of root exudates and allelochemicals in the rhizosphere
-
Bertin C, Yang X, Weston LA. The role of root exudates and allelochemicals in the rhizosphere. Plant Soil 2003, 256(1):67-83.
-
(2003)
Plant Soil
, vol.256
, Issue.1
, pp. 67-83
-
-
Bertin, C.1
Yang, X.2
Weston, L.A.3
-
79
-
-
70349551727
-
Plant-growth-promoting rhizobacteria
-
Lugtenberg B, Kamilova F. Plant-growth-promoting rhizobacteria. Annu Rev Microbioz 2009, 63(1):541-556.
-
(2009)
Annu Rev Microbioz
, vol.63
, Issue.1
, pp. 541-556
-
-
Lugtenberg, B.1
Kamilova, F.2
-
80
-
-
0001385558
-
The nature and role of metabolic leakage from root-knot nematode galls and infection by Rhizoctonia solani
-
2620222, 19305577
-
Van Gundy SD, Kirkpatrick JD, Golden J. The nature and role of metabolic leakage from root-knot nematode galls and infection by Rhizoctonia solani. J Nematol 1977, 9(2):113-121. 2620222, 19305577.
-
(1977)
J Nematol
, vol.9
, Issue.2
, pp. 113-121
-
-
Van Gundy, S.D.1
Kirkpatrick, J.D.2
Golden, J.3
-
81
-
-
48749123877
-
Biocontrol strain Pseudomonas fluorescens WCS365 inhibits germination of Fusarium oxysporum spores in tomato root exudate as well as subsequent formation of new spores
-
10.1111/j.1462-2920.2008.01638.x, 18430156
-
Kamilova F, Lamers G, Lugtenberg B. Biocontrol strain Pseudomonas fluorescens WCS365 inhibits germination of Fusarium oxysporum spores in tomato root exudate as well as subsequent formation of new spores. Environ Microbiol 2008, 10(9):2455-2461. 10.1111/j.1462-2920.2008.01638.x, 18430156.
-
(2008)
Environ Microbiol
, vol.10
, Issue.9
, pp. 2455-2461
-
-
Kamilova, F.1
Lamers, G.2
Lugtenberg, B.3
-
82
-
-
28444498829
-
Transcriptome profiling of bacterial responses to root exudates identifies genes involved in microbe-plant interactions
-
10.1073/pnas.0506407102, 1297666, 16301542
-
Mark GL, Dow JM, Kiely PD, Higgins H, Haynes J, Baysse C, Abbas A, Foley T, Franks A, Morrissey J, O'Gara F. Transcriptome profiling of bacterial responses to root exudates identifies genes involved in microbe-plant interactions. Proc Natl Acad Sci U S A 2005, 102(48):17454-17459. 10.1073/pnas.0506407102, 1297666, 16301542.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, Issue.48
, pp. 17454-17459
-
-
Mark, G.L.1
Dow, J.M.2
Kiely, P.D.3
Higgins, H.4
Haynes, J.5
Baysse, C.6
Abbas, A.7
Foley, T.8
Franks, A.9
Morrissey, J.10
O'Gara, F.11
-
83
-
-
0035877065
-
Type III protein secretion is associated with death in lower respiratory and systemic Pseudomonas aeruginosa infections
-
10.1086/320737, 11372029
-
Roy-Burman A, Savel RH, Racine S, Swanson BL, Revadigar NS, Fujimoto J, Sawa T, Frank DW, Wiener-Kronish JP. Type III protein secretion is associated with death in lower respiratory and systemic Pseudomonas aeruginosa infections. J Infect Dis 2001, 183(12):1767-1774. 10.1086/320737, 11372029.
-
(2001)
J Infect Dis
, vol.183
, Issue.12
, pp. 1767-1774
-
-
Roy-Burman, A.1
Savel, R.H.2
Racine, S.3
Swanson, B.L.4
Revadigar, N.S.5
Fujimoto, J.6
Sawa, T.7
Frank, D.W.8
Wiener-Kronish, J.P.9
-
84
-
-
0033408462
-
Damage to the cytoplasmic membrane of Escherichia coli by catechin-copper (II) complexes
-
Hoshino N, Kimura T, Yamaji A, Ando T. Damage to the cytoplasmic membrane of Escherichia coli by catechin-copper (II) complexes. Free Radic Biol Med 1999, 27(11-12):1245-1250.
-
(1999)
Free Radic Biol Med
, vol.27
, Issue.11-12
, pp. 1245-1250
-
-
Hoshino, N.1
Kimura, T.2
Yamaji, A.3
Ando, T.4
-
85
-
-
0037565061
-
Efflux-mediated heavy metal resistance in prokaryotes
-
Nies DH. Efflux-mediated heavy metal resistance in prokaryotes. FEMS Microbiol Rev 2003, 27(2-3):313-339.
-
(2003)
FEMS Microbiol Rev
, vol.27
, Issue.2-3
, pp. 313-339
-
-
Nies, D.H.1
-
86
-
-
0035253627
-
Metal-binding proteins and peptides in bioremediation and phytoremediation of heavy metals
-
10.1016/S0167-7799(00)01534-1, 11164556
-
Mejare M, Bulow L. Metal-binding proteins and peptides in bioremediation and phytoremediation of heavy metals. Trends Biotechnol 2001, 19(2):67-73. 10.1016/S0167-7799(00)01534-1, 11164556.
-
(2001)
Trends Biotechnol
, vol.19
, Issue.2
, pp. 67-73
-
-
Mejare, M.1
Bulow, L.2
-
87
-
-
0036158688
-
The elusive roles of bacterial glutathione S-transferases: new lessons from genomes
-
10.1007/s00253-001-0836-0, 11876405
-
Vuilleumier S, Pagni M. The elusive roles of bacterial glutathione S-transferases: new lessons from genomes. Appl Microbiol Biotechnol 2002, 58(2):138-146. 10.1007/s00253-001-0836-0, 11876405.
-
(2002)
Appl Microbiol Biotechnol
, vol.58
, Issue.2
, pp. 138-146
-
-
Vuilleumier, S.1
Pagni, M.2
-
88
-
-
0026094746
-
Copper resistance in Pseudomonas syringae mediated by periplasmic and outer membrane proteins
-
10.1073/pnas.88.20.8915, 52621, 1924351
-
Cha JS, Cooksey DA. Copper resistance in Pseudomonas syringae mediated by periplasmic and outer membrane proteins. Proc Natl Acad Sci U S A 1991, 88(20):8915-8919. 10.1073/pnas.88.20.8915, 52621, 1924351.
-
(1991)
Proc Natl Acad Sci U S A
, vol.88
, Issue.20
, pp. 8915-8919
-
-
Cha, J.S.1
Cooksey, D.A.2
-
89
-
-
55849141968
-
Regulation of copper homeostasis in Pseudomonas fluorescens SBW25
-
10.1111/j.1462-2920.2008.01720.x, 18707611
-
Zhang X, Rainey PB. Regulation of copper homeostasis in Pseudomonas fluorescens SBW25. Environ Microbiol 2008, 10(12):3284-3294. 10.1111/j.1462-2920.2008.01720.x, 18707611.
-
(2008)
Environ Microbiol
, vol.10
, Issue.12
, pp. 3284-3294
-
-
Zhang, X.1
Rainey, P.B.2
-
90
-
-
0033617578
-
Undetectable intracellular free copper: the requirement of a copper chaperone for superoxide dismutase
-
10.1126/science.284.5415.805, 10221913
-
Rae TD, Schmidt PJ, Pufahl RA, Culotta VC, O'Halloran TV. Undetectable intracellular free copper: the requirement of a copper chaperone for superoxide dismutase. Science 1999, 284(5415):805-808. 10.1126/science.284.5415.805, 10221913.
-
(1999)
Science
, vol.284
, Issue.5415
, pp. 805-808
-
-
Rae, T.D.1
Schmidt, P.J.2
Pufahl, R.A.3
Culotta, V.C.4
O'Halloran, T.V.5
-
91
-
-
0043192605
-
Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR
-
10.1126/science.1085950, 12958362
-
Changela A, Chen K, Xue Y, Holschen J, Outten CE, O'Halloran TV, Mondragon A. Molecular basis of metal-ion selectivity and zeptomolar sensitivity by CueR. Science 2003, 301(5638):1383-1387. 10.1126/science.1085950, 12958362.
-
(2003)
Science
, vol.301
, Issue.5638
, pp. 1383-1387
-
-
Changela, A.1
Chen, K.2
Xue, Y.3
Holschen, J.4
Outten, C.E.5
O'Halloran, T.V.6
Mondragon, A.7
-
92
-
-
0034681143
-
CopA: an Escherichia coli Cu(I)-translocating P-type ATPase
-
10.1073/pnas.97.2.652, 15385, 10639134
-
Rensing C, Fan B, Sharma R, Mitra B, Rosen BP. CopA: an Escherichia coli Cu(I)-translocating P-type ATPase. Proc Natl Acad Sci U S A 2000, 97(2):652-656. 10.1073/pnas.97.2.652, 15385, 10639134.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, Issue.2
, pp. 652-656
-
-
Rensing, C.1
Fan, B.2
Sharma, R.3
Mitra, B.4
Rosen, B.P.5
-
93
-
-
0037022682
-
Crystal structure and electron transfer kinetics of CueO, a multicopper oxidase required for copper homeostasis in Escherichia coli
-
10.1073/pnas.052710499, 122422, 11867755
-
Roberts SA, Weichsel A, Grass G, Thakali K, Hazzard JT, Tollin G, Rensing C, Montfort WR. Crystal structure and electron transfer kinetics of CueO, a multicopper oxidase required for copper homeostasis in Escherichia coli. Proc Natl Acad Sci U S A 2002, 99(5):2766-2771. 10.1073/pnas.052710499, 122422, 11867755.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, Issue.5
, pp. 2766-2771
-
-
Roberts, S.A.1
Weichsel, A.2
Grass, G.3
Thakali, K.4
Hazzard, J.T.5
Tollin, G.6
Rensing, C.7
Montfort, W.R.8
-
94
-
-
0037701544
-
Molecular analysis of the copper-transporting efflux system CusCFBA of Escherichia coli
-
10.1128/JB.185.13.3804-3812.2003, 161567, 12813074
-
Franke S, Grass G, Rensing C, Nies DH. Molecular analysis of the copper-transporting efflux system CusCFBA of Escherichia coli. J Bacteriol 2003, 185(13):3804-3812. 10.1128/JB.185.13.3804-3812.2003, 161567, 12813074.
-
(2003)
J Bacteriol
, vol.185
, Issue.13
, pp. 3804-3812
-
-
Franke, S.1
Grass, G.2
Rensing, C.3
Nies, D.H.4
-
95
-
-
67650436140
-
Alternative periplasmic copper-resistance mechanisms in Gram-negative bacteria
-
10.1111/j.1365-2958.2009.06763.x, 19538445
-
Pontel LB, Soncini FC. Alternative periplasmic copper-resistance mechanisms in Gram-negative bacteria. Mol Microbiol 2009, 73(2):212-225. 10.1111/j.1365-2958.2009.06763.x, 19538445.
-
(2009)
Mol Microbiol
, vol.73
, Issue.2
, pp. 212-225
-
-
Pontel, L.B.1
Soncini, F.C.2
-
96
-
-
0031734733
-
A chromosomal ars operon homologue of Pseudomonas aeruginosa confers increased resistance to arsenic and antimony in Escherichia coli
-
Cai J, Salmon K, DuBow MS. A chromosomal ars operon homologue of Pseudomonas aeruginosa confers increased resistance to arsenic and antimony in Escherichia coli. Microbiology 1998, 144(Pt 10):2705-2713.
-
(1998)
Microbiology
, vol.144
, Issue.PART 10
, pp. 2705-2713
-
-
Cai, J.1
Salmon, K.2
DuBow, M.S.3
-
97
-
-
0028796058
-
Dual mode of energy coupling by the oxyanion-translocating ArsB protein
-
176602, 7814328
-
Dey S, Rosen BP. Dual mode of energy coupling by the oxyanion-translocating ArsB protein. J Bacteriol 1995, 177(2):385-389. 176602, 7814328.
-
(1995)
J Bacteriol
, vol.177
, Issue.2
, pp. 385-389
-
-
Dey, S.1
Rosen, B.P.2
-
98
-
-
0029016714
-
The cobalt, zinc, and cadmium efflux system CzcABC from Alcaligenes eutrophus functions as a cation-proton antiporter in Escherichia coli
-
176940, 7751279
-
Nies DH. The cobalt, zinc, and cadmium efflux system CzcABC from Alcaligenes eutrophus functions as a cation-proton antiporter in Escherichia coli. J Bacteriol 1995, 177(10):2707-2712. 176940, 7751279.
-
(1995)
J Bacteriol
, vol.177
, Issue.10
, pp. 2707-2712
-
-
Nies, D.H.1
-
99
-
-
0037008121
-
Efflux of chromate by Pseudomonas aeruginosa cells expressing the ChrA protein
-
10.1111/j.1574-6968.2002.tb11274.x, 12113942
-
Pimentel BE, Moreno-Sanchez R, Cervantes C. Efflux of chromate by Pseudomonas aeruginosa cells expressing the ChrA protein. FEMS Microbiol Lett 2002, 212(2):249-254. 10.1111/j.1574-6968.2002.tb11274.x, 12113942.
-
(2002)
FEMS Microbiol Lett
, vol.212
, Issue.2
, pp. 249-254
-
-
Pimentel, B.E.1
Moreno-Sanchez, R.2
Cervantes, C.3
-
100
-
-
80055065227
-
New roles for bacterial siderophores in metal transport and tolerance
-
10.1111/j.1462-2920.2011.02556.x, 21883800
-
Schalk IJ, Hannauer M, Braud A. New roles for bacterial siderophores in metal transport and tolerance. Environ Microbiol 2011, 13(11):2844-2854. 10.1111/j.1462-2920.2011.02556.x, 21883800.
-
(2011)
Environ Microbiol
, vol.13
, Issue.11
, pp. 2844-2854
-
-
Schalk, I.J.1
Hannauer, M.2
Braud, A.3
-
101
-
-
77955357322
-
Efflux pumps expression and its association with porin down-regulation and β-lactamase production among Pseudomonas aeruginosa causing bloodstream infections in Brazil
-
10.1186/1471-2180-10-217, 2927533, 20704733
-
Xavier D, Picão R, Girardello R, Fehlberg L, Gales A. Efflux pumps expression and its association with porin down-regulation and β-lactamase production among Pseudomonas aeruginosa causing bloodstream infections in Brazil. BMC Microbiol 2010, 10(1):217. 10.1186/1471-2180-10-217, 2927533, 20704733.
-
(2010)
BMC Microbiol
, vol.10
, Issue.1
, pp. 217
-
-
Xavier, D.1
Picão, R.2
Girardello, R.3
Fehlberg, L.4
Gales, A.5
-
102
-
-
33947260230
-
Molecular mechanisms of antibacterial multidrug resistance
-
10.1016/j.cell.2007.03.004, 17382878
-
Alekshun MN, Levy SB. Molecular mechanisms of antibacterial multidrug resistance. Cell 2007, 128(6):1037-1050. 10.1016/j.cell.2007.03.004, 17382878.
-
(2007)
Cell
, vol.128
, Issue.6
, pp. 1037-1050
-
-
Alekshun, M.N.1
Levy, S.B.2
-
103
-
-
1642422948
-
Efflux-mediated multiresistance in Gram-negative bacteria
-
10.1111/j.1469-0691.2004.00763.x, 14759229
-
Poole K. Efflux-mediated multiresistance in Gram-negative bacteria. Clin Microbiol Infect 2004, 10(1):12-26. 10.1111/j.1469-0691.2004.00763.x, 14759229.
-
(2004)
Clin Microbiol Infect
, vol.10
, Issue.1
, pp. 12-26
-
-
Poole, K.1
-
104
-
-
0027381457
-
Penicillin-binding proteins and bacterial resistance to beta-lactams
-
10.1128/AAC.37.10.2045, 192226, 8257121
-
Georgopapadakou NH. Penicillin-binding proteins and bacterial resistance to beta-lactams. Antimicrob Agents Chemother 1993, 37(10):2045-2053. 10.1128/AAC.37.10.2045, 192226, 8257121.
-
(1993)
Antimicrob Agents Chemother
, vol.37
, Issue.10
, pp. 2045-2053
-
-
Georgopapadakou, N.H.1
-
105
-
-
0035782865
-
Phylogeny of multidrug transporters
-
10.1006/scdb.2000.0246, 11428913
-
Saier MH, Paulsen IT. Phylogeny of multidrug transporters. Semin Cell Dev Biol 2001, 12(3):205-213. 10.1006/scdb.2000.0246, 11428913.
-
(2001)
Semin Cell Dev Biol
, vol.12
, Issue.3
, pp. 205-213
-
-
Saier, M.H.1
Paulsen, I.T.2
-
106
-
-
0033957645
-
A set of genes encoding a second toluene efflux system in Pseudomonas putida DOT-T1E is linked to the tod genes for toluene metabolism
-
10.1128/JB.182.4.937-943.2000, 94367, 10648517
-
Mosqueda G, Ramos JL. A set of genes encoding a second toluene efflux system in Pseudomonas putida DOT-T1E is linked to the tod genes for toluene metabolism. J Bacteriol 2000, 182(4):937-943. 10.1128/JB.182.4.937-943.2000, 94367, 10648517.
-
(2000)
J Bacteriol
, vol.182
, Issue.4
, pp. 937-943
-
-
Mosqueda, G.1
Ramos, J.L.2
-
107
-
-
78751684152
-
MexEF-oprN multidrug efflux operon of Pseudomonas aeruginosa: regulation by the MexT activator in response to nitrosative stress and chloramphenicol
-
10.1128/AAC.00830-10, 3028769, 21078928
-
Fetar H, Gilmour C, Klinoski R, Daigle DM, Dean CR, Poole K. mexEF-oprN multidrug efflux operon of Pseudomonas aeruginosa: regulation by the MexT activator in response to nitrosative stress and chloramphenicol. Antimicrob Agents Chemother 2011, 55(2):508-514. 10.1128/AAC.00830-10, 3028769, 21078928.
-
(2011)
Antimicrob Agents Chemother
, vol.55
, Issue.2
, pp. 508-514
-
-
Fetar, H.1
Gilmour, C.2
Klinoski, R.3
Daigle, D.M.4
Dean, C.R.5
Poole, K.6
-
108
-
-
0034871821
-
Overexpression of the MexEF-OprN multidrug efflux system affects cell-to-cell signaling in Pseudomonas aeruginosa
-
10.1128/JB.183.18.5213-5222.2001, 95401, 11514502
-
Kohler T, van Delden C, Curty LK, Hamzehpour MM, Pechere JC. Overexpression of the MexEF-OprN multidrug efflux system affects cell-to-cell signaling in Pseudomonas aeruginosa. J Bacteriol 2001, 183(18):5213-5222. 10.1128/JB.183.18.5213-5222.2001, 95401, 11514502.
-
(2001)
J Bacteriol
, vol.183
, Issue.18
, pp. 5213-5222
-
-
Kohler, T.1
van Delden, C.2
Curty, L.K.3
Hamzehpour, M.M.4
Pechere, J.C.5
-
109
-
-
77951074736
-
Mechanism of recognition of compounds of diverse structures by the multidrug efflux pump AcrB of Escherichia coli
-
10.1073/pnas.1001460107, 2872455, 20212112
-
Takatsuka Y, Chen C, Nikaido H. Mechanism of recognition of compounds of diverse structures by the multidrug efflux pump AcrB of Escherichia coli. Proc Natl Acad Sci U S A 2010, 107(15):6559-6565. 10.1073/pnas.1001460107, 2872455, 20212112.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, Issue.15
, pp. 6559-6565
-
-
Takatsuka, Y.1
Chen, C.2
Nikaido, H.3
-
110
-
-
0030023489
-
The local repressor AcrR plays a modulating role in the regulation of acrAB genes of Escherichia coli by global stress signals
-
10.1046/j.1365-2958.1996.357881.x, 8821940
-
Ma D, Alberti M, Lynch C, Nikaido H, Hearst JE. The local repressor AcrR plays a modulating role in the regulation of acrAB genes of Escherichia coli by global stress signals. Mol Microbiol 1996, 19(1):101-112. 10.1046/j.1365-2958.1996.357881.x, 8821940.
-
(1996)
Mol Microbiol
, vol.19
, Issue.1
, pp. 101-112
-
-
Ma, D.1
Alberti, M.2
Lynch, C.3
Nikaido, H.4
Hearst, J.E.5
-
111
-
-
0242500347
-
Reactive oxygen species produced by NADPH oxidase regulate plant cell growth
-
10.1038/nature01485, 12660786
-
Foreman J, Demidchik V, Bothwell JHF, Mylona P, Miedema H, Torres MA, Linstead P, Costa S, Brownlee C, Jones JDG, Davies JM, Dolan L. Reactive oxygen species produced by NADPH oxidase regulate plant cell growth. Nature 2003, 422(6930):442-446. 10.1038/nature01485, 12660786.
-
(2003)
Nature
, vol.422
, Issue.6930
, pp. 442-446
-
-
Foreman, J.1
Demidchik, V.2
Bothwell, J.H.F.3
Mylona, P.4
Miedema, H.5
Torres, M.A.6
Linstead, P.7
Costa, S.8
Brownlee, C.9
Jones, J.D.G.10
Davies, J.M.11
Dolan, L.12
-
112
-
-
0031448239
-
Mechanisms for the generation of reactive oxygen species in plant defence - a broad perspective
-
Bolwell G, Wojtaszek P. Mechanisms for the generation of reactive oxygen species in plant defence - a broad perspective. Physiol Molec Plant Pathol 1997, 51(6):347-366.
-
(1997)
Physiol Molec Plant Pathol
, vol.51
, Issue.6
, pp. 347-366
-
-
Bolwell, G.1
Wojtaszek, P.2
-
113
-
-
0033118910
-
Oxidative stress
-
10.1016/S1369-5274(99)80033-2, 10322176
-
Storz G, Imlay JA. Oxidative stress. Curr Opin Microbiol 1999, 2(2):188-194. 10.1016/S1369-5274(99)80033-2, 10322176.
-
(1999)
Curr Opin Microbiol
, vol.2
, Issue.2
, pp. 188-194
-
-
Storz, G.1
Imlay, J.A.2
-
114
-
-
0032436624
-
The two-component regulators GacS and GacA influence accumulation of the stationary-phase sigma factor σS and the stress response in Pseudomonas fluorescens Pf-5
-
107767, 9852008
-
Whistler CA, Corbell NA, Sarniguet A, Ream W, Loper JE. The two-component regulators GacS and GacA influence accumulation of the stationary-phase sigma factor σS and the stress response in Pseudomonas fluorescens Pf-5. J Bacteriol 1998, 180(24):6635-6641. 107767, 9852008.
-
(1998)
J Bacteriol
, vol.180
, Issue.24
, pp. 6635-6641
-
-
Whistler, C.A.1
Corbell, N.A.2
Sarniguet, A.3
Ream, W.4
Loper, J.E.5
-
115
-
-
0033874090
-
Role of the Pseudomonas aeruginosa oxyR-recG operon in oxidative stress defense and DNA repair: OxyR-dependent regulation of katB-ankB, ahpB, and ahpC-ahpF
-
10.1128/JB.182.16.4533-4544.2000, 94625, 10913087
-
Ochsner UA, Vasil ML, Alsabbagh E, Parvatiyar K, Hassett DJ. Role of the Pseudomonas aeruginosa oxyR-recG operon in oxidative stress defense and DNA repair: OxyR-dependent regulation of katB-ankB, ahpB, and ahpC-ahpF. J Bacteriol 2000, 182(16):4533-4544. 10.1128/JB.182.16.4533-4544.2000, 94625, 10913087.
-
(2000)
J Bacteriol
, vol.182
, Issue.16
, pp. 4533-4544
-
-
Ochsner, U.A.1
Vasil, M.L.2
Alsabbagh, E.3
Parvatiyar, K.4
Hassett, D.J.5
-
116
-
-
17644408447
-
Pseudomonas aeruginosa SoxR does not conform to the archetypal paradigm for SoxR-dependent regulation of the bacterial oxidative stress adaptive response
-
10.1128/IAI.73.5.2958-2966.2005, 1087365, 15845502
-
Palma M, Zurita J, Ferreras JA, Worgall S, Larone DH, Shi L, Campagne F, Quadri LE. Pseudomonas aeruginosa SoxR does not conform to the archetypal paradigm for SoxR-dependent regulation of the bacterial oxidative stress adaptive response. Infect Immun 2005, 73(5):2958-2966. 10.1128/IAI.73.5.2958-2966.2005, 1087365, 15845502.
-
(2005)
Infect Immun
, vol.73
, Issue.5
, pp. 2958-2966
-
-
Palma, M.1
Zurita, J.2
Ferreras, J.A.3
Worgall, S.4
Larone, D.H.5
Shi, L.6
Campagne, F.7
Quadri, L.E.8
-
117
-
-
66649117821
-
Influence of water limitation on endogenous oxidative stress and cell death within unsaturated Pseudomonas putida biofilms
-
10.1111/j.1462-2920.2009.01876.x, 19222541
-
Chang WS, Li X, Halverson LJ. Influence of water limitation on endogenous oxidative stress and cell death within unsaturated Pseudomonas putida biofilms. Environ Microbiol 2009, 11(6):1482-1492. 10.1111/j.1462-2920.2009.01876.x, 19222541.
-
(2009)
Environ Microbiol
, vol.11
, Issue.6
, pp. 1482-1492
-
-
Chang, W.S.1
Li, X.2
Halverson, L.J.3
-
118
-
-
84855475719
-
Reactive oxygen and oxidative stress tolerance in plant pathogenic Pseudomonas
-
10.1111/j.1574-6968.2011.02449.x, 22092667
-
Fones H, Preston GM. Reactive oxygen and oxidative stress tolerance in plant pathogenic Pseudomonas. FEMS Microbiol Lett 2012, 327(1):1-8. 10.1111/j.1574-6968.2011.02449.x, 22092667.
-
(2012)
FEMS Microbiol Lett
, vol.327
, Issue.1
, pp. 1-8
-
-
Fones, H.1
Preston, G.M.2
-
119
-
-
58149204233
-
Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14-3 during low temperature adaptation
-
10.1007/s00792-008-0197-z, 18931822
-
Ayub ND, Tribelli PM, Lopez NI. Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14-3 during low temperature adaptation. Extremophiles 2009, 13(1):59-66. 10.1007/s00792-008-0197-z, 18931822.
-
(2009)
Extremophiles
, vol.13
, Issue.1
, pp. 59-66
-
-
Ayub, N.D.1
Tribelli, P.M.2
Lopez, N.I.3
-
120
-
-
79960370892
-
Natural functions of bacterial polyhydroxyalkanoates
-
Berlin/Heidelberg: Springer, Chen GGQ
-
Castro-Sowinski S, Burdman S, Matan O, Okon Y. Natural functions of bacterial polyhydroxyalkanoates. In Plastics from Bacteria 2010, 39-61. Berlin/Heidelberg: Springer, Chen GGQ.
-
(2010)
In Plastics from Bacteria
, pp. 39-61
-
-
Castro-Sowinski, S.1
Burdman, S.2
Matan, O.3
Okon, Y.4
-
121
-
-
0345276491
-
Pyrroloquinoline-quinone synthesized in Escherichia coli by pyrroloquinoline-quinone synthase of Deinococcus radiodurans plays a role beyond mineral phosphate solubilization
-
10.1016/j.bbrc.2003.10.121, 14637137
-
Khairnar NP, Misra HS, Apte SK. Pyrroloquinoline-quinone synthesized in Escherichia coli by pyrroloquinoline-quinone synthase of Deinococcus radiodurans plays a role beyond mineral phosphate solubilization. Biochem Biophys Res Commun 2003, 312(2):303-308. 10.1016/j.bbrc.2003.10.121, 14637137.
-
(2003)
Biochem Biophys Res Commun
, vol.312
, Issue.2
, pp. 303-308
-
-
Khairnar, N.P.1
Misra, H.S.2
Apte, S.K.3
-
122
-
-
0035074011
-
Responses of Gram-negative bacteria to certain environmental stressors
-
10.1016/S1369-5274(00)00183-1, 11282472
-
Ramos JL, Gallegos MT, Marques S, Ramos-Gonzalez MI, Espinosa-Urgel M, Segura A. Responses of Gram-negative bacteria to certain environmental stressors. Curr Opin Microbiol 2001, 4(2):166-171. 10.1016/S1369-5274(00)00183-1, 11282472.
-
(2001)
Curr Opin Microbiol
, vol.4
, Issue.2
, pp. 166-171
-
-
Ramos, J.L.1
Gallegos, M.T.2
Marques, S.3
Ramos-Gonzalez, M.I.4
Espinosa-Urgel, M.5
Segura, A.6
-
123
-
-
0036867143
-
Bacterial cold-shock proteins
-
10.1007/PL00012513, 12530521
-
Ermolenko DN, Makhatadze GI. Bacterial cold-shock proteins. Cell Mol Life Sci 2002, 59(11):1902-1913. 10.1007/PL00012513, 12530521.
-
(2002)
Cell Mol Life Sci
, vol.59
, Issue.11
, pp. 1902-1913
-
-
Ermolenko, D.N.1
Makhatadze, G.I.2
-
124
-
-
0023770899
-
Heat shock response of Pseudomonas aeruginosa
-
211343, 3136146
-
Allan B, Linseman M, MacDonald LA, Lam JS, Kropinski AM. Heat shock response of Pseudomonas aeruginosa. J Bacteriol 1988, 170(8):3668-3674. 211343, 3136146.
-
(1988)
J Bacteriol
, vol.170
, Issue.8
, pp. 3668-3674
-
-
Allan, B.1
Linseman, M.2
MacDonald, L.A.3
Lam, J.S.4
Kropinski, A.M.5
-
125
-
-
0030044799
-
A cycle of binding and release of the DnaK, DnaJ and GrpE chaperones regulates activity of the Escherichia coli heat shock transcription factor sigma32
-
449979, 8599944
-
Gamer J, Multhaup G, Tomoyasu T, McCarty JS, Rudiger S, Schonfeld HJ, Schirra C, Bujard H, Bukau B. A cycle of binding and release of the DnaK, DnaJ and GrpE chaperones regulates activity of the Escherichia coli heat shock transcription factor sigma32. EMBO J 1996, 15(3):607-617. 449979, 8599944.
-
(1996)
EMBO J
, vol.15
, Issue.3
, pp. 607-617
-
-
Gamer, J.1
Multhaup, G.2
Tomoyasu, T.3
McCarty, J.S.4
Rudiger, S.5
Schonfeld, H.J.6
Schirra, C.7
Bujard, H.8
Bukau, B.9
-
126
-
-
0024557026
-
Physiological and genetic responses of bacteria to osmotic stress
-
372720, 2651863
-
Csonka LN. Physiological and genetic responses of bacteria to osmotic stress. Microbiol Rev 1989, 53(1):121-147. 372720, 2651863.
-
(1989)
Microbiol Rev
, vol.53
, Issue.1
, pp. 121-147
-
-
Csonka, L.N.1
-
127
-
-
33645236736
-
Microarray analysis of the osmotic stress response in Pseudomonas aeruginosa
-
10.1128/JB.188.7.2721-2725.2006, 1428433, 16547062
-
Aspedon A, Palmer K, Whiteley M. Microarray analysis of the osmotic stress response in Pseudomonas aeruginosa. J Bacteriol 2006, 188(7):2721-2725. 10.1128/JB.188.7.2721-2725.2006, 1428433, 16547062.
-
(2006)
J Bacteriol
, vol.188
, Issue.7
, pp. 2721-2725
-
-
Aspedon, A.1
Palmer, K.2
Whiteley, M.3
-
128
-
-
0017031867
-
Microbial water stress
-
413986, 1008746
-
Brown AD. Microbial water stress. Bacteriol Rev 1976, 40(4):803-846. 413986, 1008746.
-
(1976)
Bacteriol Rev
, vol.40
, Issue.4
, pp. 803-846
-
-
Brown, A.D.1
-
129
-
-
41949101593
-
Identification of two gene clusters and a transcriptional regulator required for Pseudomonas aeruginosa glycine betaine catabolism
-
10.1128/JB.01393-07, 2293255, 17951379
-
Wargo MJ, Szwergold BS, Hogan DA. Identification of two gene clusters and a transcriptional regulator required for Pseudomonas aeruginosa glycine betaine catabolism. J Bacteriol 2008, 190(8):2690-2699. 10.1128/JB.01393-07, 2293255, 17951379.
-
(2008)
J Bacteriol
, vol.190
, Issue.8
, pp. 2690-2699
-
-
Wargo, M.J.1
Szwergold, B.S.2
Hogan, D.A.3
-
130
-
-
0022510569
-
Selection, mapping, and characterization of osmoregulatory mutants of Escherichia coli blocked in the choline-glycine betaine pathway
-
214507, 3512526
-
Styrvold OB, Falkenberg P, Landfald B, Eshoo MW, Bjornsen T, Strom AR. Selection, mapping, and characterization of osmoregulatory mutants of Escherichia coli blocked in the choline-glycine betaine pathway. J Bacteriol 1986, 165(3):856-863. 214507, 3512526.
-
(1986)
J Bacteriol
, vol.165
, Issue.3
, pp. 856-863
-
-
Styrvold, O.B.1
Falkenberg, P.2
Landfald, B.3
Eshoo, M.W.4
Bjornsen, T.5
Strom, A.R.6
-
131
-
-
2942607385
-
Identification of mdoD, an mdoG paralog which encodes a twin-arginine-dependent periplasmic protein that controls osmoregulated periplasmic glucan backbone structures
-
10.1128/JB.186.12.3695-3702.2004, 419940, 15175282
-
Lequette Y, Odberg-Ferragut C, Bohin JP, Lacroix JM. Identification of mdoD, an mdoG paralog which encodes a twin-arginine-dependent periplasmic protein that controls osmoregulated periplasmic glucan backbone structures. J Bacteriol 2004, 186(12):3695-3702. 10.1128/JB.186.12.3695-3702.2004, 419940, 15175282.
-
(2004)
J Bacteriol
, vol.186
, Issue.12
, pp. 3695-3702
-
-
Lequette, Y.1
Odberg-Ferragut, C.2
Bohin, J.P.3
Lacroix, J.M.4
-
132
-
-
0029819774
-
Osmoadaptation by rhizosphere bacteria
-
10.1146/annurev.micro.50.1.101, 8905077
-
Miller KJ, Wood JM. Osmoadaptation by rhizosphere bacteria. Annu Rev Microbiol 1996, 50:101-136. 10.1146/annurev.micro.50.1.101, 8905077.
-
(1996)
Annu Rev Microbiol
, vol.50
, pp. 101-136
-
-
Miller, K.J.1
Wood, J.M.2
-
133
-
-
0025437968
-
Enteric bacteria and osmotic stress: intracellular potassium glutamate as a secondary signal of osmotic stress?
-
Booth IR, Higgins CF. Enteric bacteria and osmotic stress: intracellular potassium glutamate as a secondary signal of osmotic stress?. FEMS Microbiol Rev 1990, 6(2-3):239-246.
-
(1990)
FEMS Microbiol Rev
, vol.6
, Issue.2-3
, pp. 239-246
-
-
Booth, I.R.1
Higgins, C.F.2
-
134
-
-
0142183511
-
Interactions in the tomato rhizosphere of two Pseudomonas biocontrol strains with the phytopathogenic fungus Fusarium oxysporum f. sp. radicis-lycopersici
-
10.1094/MPMI.2003.16.11.983, 14601666
-
Bolwerk A, Lagopodi AL, Wijfjes AH, Lamers GE, Chin AWTF, Lugtenberg BJ, Bloemberg GV. Interactions in the tomato rhizosphere of two Pseudomonas biocontrol strains with the phytopathogenic fungus Fusarium oxysporum f. sp. radicis-lycopersici. Mol Plant Microbe Interact 2003, 16(11):983-993. 10.1094/MPMI.2003.16.11.983, 14601666.
-
(2003)
Mol Plant Microbe Interact
, vol.16
, Issue.11
, pp. 983-993
-
-
Bolwerk, A.1
Lagopodi, A.L.2
Wijfjes, A.H.3
Lamers, G.E.4
Chin, A.W.T.F.5
Lugtenberg, B.J.6
Bloemberg, G.V.7
-
135
-
-
0034788018
-
Molecular determinants of rhizosphere colonization by Pseudomonas
-
10.1146/annurev.phyto.39.1.461, 11701873
-
Lugtenberg BJ, Dekkers L, Bloemberg GV. Molecular determinants of rhizosphere colonization by Pseudomonas. Annu Rev Phytopathol 2001, 39:461-490. 10.1146/annurev.phyto.39.1.461, 11701873.
-
(2001)
Annu Rev Phytopathol
, vol.39
, pp. 461-490
-
-
Lugtenberg, B.J.1
Dekkers, L.2
Bloemberg, G.V.3
-
136
-
-
33745065812
-
Exploiting new systems-based strategies to elucidate plant-bacterial interactions in the rhizosphere
-
10.1007/s00248-006-9019-y, 16596439
-
Kiely PD, Haynes JM, Higgins CH, Franks A, Mark GL, Morrissey JP, O'Gara F. Exploiting new systems-based strategies to elucidate plant-bacterial interactions in the rhizosphere. Microb Ecol 2006, 51(3):257-266. 10.1007/s00248-006-9019-y, 16596439.
-
(2006)
Microb Ecol
, vol.51
, Issue.3
, pp. 257-266
-
-
Kiely, P.D.1
Haynes, J.M.2
Higgins, C.H.3
Franks, A.4
Mark, G.L.5
Morrissey, J.P.6
O'Gara, F.7
-
137
-
-
0020014666
-
Bacterial chemotaxis
-
10.1146/annurev.ph.44.030182.002441, 6280591
-
Boyd A, Simon M. Bacterial chemotaxis. Annu Rev Physiol 1982, 44(1):501-517. 10.1146/annurev.ph.44.030182.002441, 6280591.
-
(1982)
Annu Rev Physiol
, vol.44
, Issue.1
, pp. 501-517
-
-
Boyd, A.1
Simon, M.2
-
138
-
-
0036831819
-
Flagella-driven chemotaxis towards exudate components is an important trait for tomato root colonization by Pseudomonas fluorescens
-
10.1094/MPMI.2002.15.11.1173, 12423023
-
de Weert S, Vermeiren H, Mulders IH, Kuiper I, Hendrickx N, Bloemberg GV, Vanderleyden J, De Mot R, Lugtenberg BJ. Flagella-driven chemotaxis towards exudate components is an important trait for tomato root colonization by Pseudomonas fluorescens. Mol Plant Microbe Interact 2002, 15(11):1173-1180. 10.1094/MPMI.2002.15.11.1173, 12423023.
-
(2002)
Mol Plant Microbe Interact
, vol.15
, Issue.11
, pp. 1173-1180
-
-
de Weert, S.1
Vermeiren, H.2
Mulders, I.H.3
Kuiper, I.4
Hendrickx, N.5
Bloemberg, G.V.6
Vanderleyden, J.7
De Mot, R.8
Lugtenberg, B.J.9
-
139
-
-
10044252242
-
Making sense of it all: bacterial chemotaxis
-
10.1038/nrm1524, 15573139
-
Wadhams GH, Armitage JP. Making sense of it all: bacterial chemotaxis. Nat Rev Mol Cell Biol 2004, 5(12):1024-1037. 10.1038/nrm1524, 15573139.
-
(2004)
Nat Rev Mol Cell Biol
, vol.5
, Issue.12
, pp. 1024-1037
-
-
Wadhams, G.H.1
Armitage, J.P.2
-
140
-
-
0026572085
-
Correlation between phosphorylation of the chemotaxis protein CheY and its activity at the flagellar motor
-
10.1021/bi00121a034, 1737035
-
Barak R, Eisenbach M. Correlation between phosphorylation of the chemotaxis protein CheY and its activity at the flagellar motor. Biochemistry 1992, 31(6):1821-1826. 10.1021/bi00121a034, 1737035.
-
(1992)
Biochemistry
, vol.31
, Issue.6
, pp. 1821-1826
-
-
Barak, R.1
Eisenbach, M.2
-
141
-
-
0032949378
-
Type IV pili and cell motility
-
10.1046/j.1365-2958.1999.01339.x, 10216854
-
Wall D, Kaiser D. Type IV pili and cell motility. Mol Microbiol 1999, 32(1):1-10. 10.1046/j.1365-2958.1999.01339.x, 10216854.
-
(1999)
Mol Microbiol
, vol.32
, Issue.1
, pp. 1-10
-
-
Wall, D.1
Kaiser, D.2
-
142
-
-
0035132689
-
Mucoid mutants of the biocontrol strain Pseudomonas fluorescens CHA0 show increased ability in biofilm formation on mycorrhizal and nonmycorrhizal carrot roots
-
10.1094/MPMI.2001.14.2.255, 11204790
-
Bianciotto V, Andreotti S, Balestrini R, Bonfante P, Perotto S. Mucoid mutants of the biocontrol strain Pseudomonas fluorescens CHA0 show increased ability in biofilm formation on mycorrhizal and nonmycorrhizal carrot roots. Mol Plant Microbe Interact 2001, 14(2):255-260. 10.1094/MPMI.2001.14.2.255, 11204790.
-
(2001)
Mol Plant Microbe Interact
, vol.14
, Issue.2
, pp. 255-260
-
-
Bianciotto, V.1
Andreotti, S.2
Balestrini, R.3
Bonfante, P.4
Perotto, S.5
-
143
-
-
0034005123
-
Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds
-
10.1128/JB.182.9.2363-2369.2000, 111295, 10762233
-
Espinosa-Urgel M, Salido A, Ramos JL. Genetic analysis of functions involved in adhesion of Pseudomonas putida to seeds. J Bacteriol 2000, 182(9):2363-2369. 10.1128/JB.182.9.2363-2369.2000, 111295, 10762233.
-
(2000)
J Bacteriol
, vol.182
, Issue.9
, pp. 2363-2369
-
-
Espinosa-Urgel, M.1
Salido, A.2
Ramos, J.L.3
-
144
-
-
0036791036
-
HecA, a member of a class of adhesins produced by diverse pathogenic bacteria, contributes to the attachment, aggregation, epidermal cell killing, and virulence phenotypes of Erwinia chrysanthemi EC16 on Nicotiana clevelandii seedlings
-
10.1073/pnas.202358699, 130600, 12271135
-
Rojas CM, Ham JH, Deng WL, Doyle JJ, Collmer A. HecA, a member of a class of adhesins produced by diverse pathogenic bacteria, contributes to the attachment, aggregation, epidermal cell killing, and virulence phenotypes of Erwinia chrysanthemi EC16 on Nicotiana clevelandii seedlings. Proc Natl Acad Sci U S A 2002, 99(20):13142-13147. 10.1073/pnas.202358699, 130600, 12271135.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, Issue.20
, pp. 13142-13147
-
-
Rojas, C.M.1
Ham, J.H.2
Deng, W.L.3
Doyle, J.J.4
Collmer, A.5
-
145
-
-
0032146667
-
Role of the O-antigen of lipopolysaccharide, and possible roles of growth rate and of NADH:ubiquinone oxidoreductase (nuo) in competitive tomato root-tip colonization by Pseudomonas fluorescens WCS365
-
10.1094/MPMI.1998.11.8.763, 9675892
-
Dekkers LC, van der Bij AJ, Mulders IH, Phoelich CC, Wentwoord RA, Glandorf DC, Wijffelman CA, Lugtenberg BJ. Role of the O-antigen of lipopolysaccharide, and possible roles of growth rate and of NADH:ubiquinone oxidoreductase (nuo) in competitive tomato root-tip colonization by Pseudomonas fluorescens WCS365. Mol Plant Microbe Interact 1998, 11(8):763-771. 10.1094/MPMI.1998.11.8.763, 9675892.
-
(1998)
Mol Plant Microbe Interact
, vol.11
, Issue.8
, pp. 763-771
-
-
Dekkers, L.C.1
van der Bij, A.J.2
Mulders, I.H.3
Phoelich, C.C.4
Wentwoord, R.A.5
Glandorf, D.C.6
Wijffelman, C.A.7
Lugtenberg, B.J.8
-
146
-
-
34247221579
-
The tad locus: postcards from the widespread colonization island
-
10.1038/nrmicro1636, 17435791
-
Tomich M, Planet PJ, Figurski DH. The tad locus: postcards from the widespread colonization island. Nat Rev Microbiol 2007, 5(5):363-375. 10.1038/nrmicro1636, 17435791.
-
(2007)
Nat Rev Microbiol
, vol.5
, Issue.5
, pp. 363-375
-
-
Tomich, M.1
Planet, P.J.2
Figurski, D.H.3
-
147
-
-
79960586903
-
Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor
-
10.1073/pnas.1105380108, 3131351, 21690406
-
O'Connell Motherway M, Zomer A, Leahy SC, Reunanen J, Bottacini F, Claesson MJ, O'Brien F, Flynn K, Casey PG, Munoz JA, Kearney B, Houston AM, O'Mahony C, Higgins DG, Shanahan F, Palva A, de Vos WM, Fitzgerald GF, Ventura M, O'Toole PW, van Sinderen D. Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor. Proc Natl Acad Sci U S A 2011, 108(27):11217-11222. 10.1073/pnas.1105380108, 3131351, 21690406.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, Issue.27
, pp. 11217-11222
-
-
O'Connell Motherway, M.1
Zomer, A.2
Leahy, S.C.3
Reunanen, J.4
Bottacini, F.5
Claesson, M.J.6
O'Brien, F.7
Flynn, K.8
Casey, P.G.9
Munoz, J.A.10
Kearney, B.11
Houston, A.M.12
O'Mahony, C.13
Higgins, D.G.14
Shanahan, F.15
Palva, A.16
de Vos, W.M.17
Fitzgerald, G.F.18
Ventura, M.19
O'Toole, P.W.20
van Sinderen, D.21
more..
-
148
-
-
20444495696
-
Analysis of Pseudomonas putida KT2440 gene expression in the maize rhizosphere: in vivo expression technology capture and identification of root-activated promoters
-
10.1128/JB.187.12.4033-4041.2005, 1151710, 15937166
-
Ramos-Gonzalez MI, Campos MJ, Ramos JL. Analysis of Pseudomonas putida KT2440 gene expression in the maize rhizosphere: in vivo expression technology capture and identification of root-activated promoters. J Bacteriol 2005, 187(12):4033-4041. 10.1128/JB.187.12.4033-4041.2005, 1151710, 15937166.
-
(2005)
J Bacteriol
, vol.187
, Issue.12
, pp. 4033-4041
-
-
Ramos-Gonzalez, M.I.1
Campos, M.J.2
Ramos, J.L.3
-
149
-
-
0026827553
-
Genetic analysis of the aggA locus involved in agglutination and adherence of Pseudomonas putida, a beneficial fluorescent pseudomonad
-
10.1094/MPMI-5-154, 1617198
-
Buell CR, Anderson AJ. Genetic analysis of the aggA locus involved in agglutination and adherence of Pseudomonas putida, a beneficial fluorescent pseudomonad. Mol Plant Microbe Interact 1992, 5(2):154-162. 10.1094/MPMI-5-154, 1617198.
-
(1992)
Mol Plant Microbe Interact
, vol.5
, Issue.2
, pp. 154-162
-
-
Buell, C.R.1
Anderson, A.J.2
-
150
-
-
0032499721
-
A site-specific recombinase is required for competitive root colonization by Pseudomonas fluorescens WCS365
-
10.1073/pnas.95.12.7051, 22735, 9618537
-
Dekkers LC, Phoelich CC, van der Fits L, Lugtenberg BJ. A site-specific recombinase is required for competitive root colonization by Pseudomonas fluorescens WCS365. Proc Natl Acad Sci U S A 1998, 95(12):7051-7056. 10.1073/pnas.95.12.7051, 22735, 9618537.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, Issue.12
, pp. 7051-7056
-
-
Dekkers, L.C.1
Phoelich, C.C.2
van der Fits, L.3
Lugtenberg, B.J.4
-
151
-
-
0242709459
-
Genes encoding a cellulosic polymer contribute toward the ecological success of Pseudomonas fluorescens SBW25 on plant surfaces
-
10.1046/j.1365-294X.2003.01953.x, 14629390
-
Gal M, Preston GM, Massey RC, Spiers AJ, Rainey PB. Genes encoding a cellulosic polymer contribute toward the ecological success of Pseudomonas fluorescens SBW25 on plant surfaces. Mol Ecol 2003, 12(11):3109-3121. 10.1046/j.1365-294X.2003.01953.x, 14629390.
-
(2003)
Mol Ecol
, vol.12
, Issue.11
, pp. 3109-3121
-
-
Gal, M.1
Preston, G.M.2
Massey, R.C.3
Spiers, A.J.4
Rainey, P.B.5
-
152
-
-
0033028398
-
Pseudomonas syringae phytotoxins: mode of action, regulation, and biosynthesis by peptide and polyketide synthetases
-
98966, 10357851
-
Bender CL, Alarcon-Chaidez F, Gross DC. Pseudomonas syringae phytotoxins: mode of action, regulation, and biosynthesis by peptide and polyketide synthetases. Microbiol Mol Biol Rev 1999, 63(2):266-292. 98966, 10357851.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, Issue.2
, pp. 266-292
-
-
Bender, C.L.1
Alarcon-Chaidez, F.2
Gross, D.C.3
-
153
-
-
75749090020
-
Diversity and evolution of the phenazine biosynthesis pathway
-
10.1128/AEM.02009-09, 2813009, 20008172
-
Mavrodi DV, Peever TL, Mavrodi OV, Parejko JA, Raaijmakers JM, Lemanceau P, Mazurier S, Heide L, Blankenfeldt W, Weller DM, Thomashow LS. Diversity and evolution of the phenazine biosynthesis pathway. Appl Environ Microbiol 2010, 76(3):866-879. 10.1128/AEM.02009-09, 2813009, 20008172.
-
(2010)
Appl Environ Microbiol
, vol.76
, Issue.3
, pp. 866-879
-
-
Mavrodi, D.V.1
Peever, T.L.2
Mavrodi, O.V.3
Parejko, J.A.4
Raaijmakers, J.M.5
Lemanceau, P.6
Mazurier, S.7
Heide, L.8
Blankenfeldt, W.9
Weller, D.M.10
Thomashow, L.S.11
-
154
-
-
0035191632
-
PhzO, a gene for biosynthesis of 2-hydroxylated phenazine compounds in Pseudomonas aureofaciens 30-84
-
10.1128/JB.183.1.318-327.2001, 94881, 11114932
-
Delaney SM, Mavrodi DV, Bonsall RF, Thomashow LS. phzO, a gene for biosynthesis of 2-hydroxylated phenazine compounds in Pseudomonas aureofaciens 30-84. J Bacteriol 2001, 183(1):318-327. 10.1128/JB.183.1.318-327.2001, 94881, 11114932.
-
(2001)
J Bacteriol
, vol.183
, Issue.1
, pp. 318-327
-
-
Delaney, S.M.1
Mavrodi, D.V.2
Bonsall, R.F.3
Thomashow, L.S.4
-
155
-
-
33847068366
-
Structural and functional analysis of the pyocyanin biosynthetic protein PhzM from Pseudomonas aeruginosa
-
10.1021/bi6024403, 2572083, 17253782
-
Parsons JF, Greenhagen BT, Shi K, Calabrese K, Robinson H, Ladner JE. Structural and functional analysis of the pyocyanin biosynthetic protein PhzM from Pseudomonas aeruginosa. Biochemistry 2007, 46(7):1821-1828. 10.1021/bi6024403, 2572083, 17253782.
-
(2007)
Biochemistry
, vol.46
, Issue.7
, pp. 1821-1828
-
-
Parsons, J.F.1
Greenhagen, B.T.2
Shi, K.3
Calabrese, K.4
Robinson, H.5
Ladner, J.E.6
-
156
-
-
48749103307
-
Molecular analysis of a novel gene cluster encoding an insect toxin in plant-associated strains of Pseudomonas fluorescens
-
10.1111/j.1462-2920.2008.01662.x, 18484997
-
Pechy-Tarr M, Bruck DJ, Maurhofer M, Fischer E, Vogne C, Henkels MD, Donahue KM, Grunder J, Loper JE, Keel C. Molecular analysis of a novel gene cluster encoding an insect toxin in plant-associated strains of Pseudomonas fluorescens. Environ Microbiol 2008, 10(9):2368-2386. 10.1111/j.1462-2920.2008.01662.x, 18484997.
-
(2008)
Environ Microbiol
, vol.10
, Issue.9
, pp. 2368-2386
-
-
Pechy-Tarr, M.1
Bruck, D.J.2
Maurhofer, M.3
Fischer, E.4
Vogne, C.5
Henkels, M.D.6
Donahue, K.M.7
Grunder, J.8
Loper, J.E.9
Keel, C.10
-
157
-
-
0036678865
-
A single Photorhabdus gene, makes caterpillars floppy (mcf), allows Escherichia coli to persist within and kill insects
-
10.1073/pnas.102068099, 125031, 12136122
-
Daborn PJ, Waterfield N, Silva CP, Au CP, Sharma S, Ffrench-Constant RH. A single Photorhabdus gene, makes caterpillars floppy (mcf), allows Escherichia coli to persist within and kill insects. Proc Natl Acad Sci U S A 2002, 99(16):10742-10747. 10.1073/pnas.102068099, 125031, 12136122.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, Issue.16
, pp. 10742-10747
-
-
Daborn, P.J.1
Waterfield, N.2
Silva, C.P.3
Au, C.P.4
Sharma, S.5
Ffrench-Constant, R.H.6
-
158
-
-
0033626325
-
Pyoverdines: pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species
-
10.1007/s002030000188, 11041343
-
Meyer JM. Pyoverdines: pigments, siderophores and potential taxonomic markers of fluorescent Pseudomonas species. Arch Microbiol 2000, 174(3):135-142. 10.1007/s002030000188, 11041343.
-
(2000)
Arch Microbiol
, vol.174
, Issue.3
, pp. 135-142
-
-
Meyer, J.M.1
-
159
-
-
33847599810
-
Enhanced plant growth by siderophores produced by plant growth-promoting rhizobacteria
-
Kloepper JW, Leong J, Teintze M, Schroth MN. Enhanced plant growth by siderophores produced by plant growth-promoting rhizobacteria. Nature 1980, 286(5776):885-886.
-
(1980)
Nature
, vol.286
, Issue.5776
, pp. 885-886
-
-
Kloepper, J.W.1
Leong, J.2
Teintze, M.3
Schroth, M.N.4
-
160
-
-
0035122722
-
Extremophilic orgainisms as an unexplored source of antifungal compounds
-
10.7164/antibiotics.54.56, 11269715
-
Phoebe CH, Combie J, Albert FG, Van Tran K, Cabrera J, Correira HJ, Guo Y, Lindermuth J, Rauert N, Galbraith W, Selitrennikoff CP. Extremophilic orgainisms as an unexplored source of antifungal compounds. J Antibiot 2001, 54(1):56-65. 10.7164/antibiotics.54.56, 11269715.
-
(2001)
J Antibiot
, vol.54
, Issue.1
, pp. 56-65
-
-
Phoebe, C.H.1
Combie, J.2
Albert, F.G.3
Van Tran, K.4
Cabrera, J.5
Correira, H.J.6
Guo, Y.7
Lindermuth, J.8
Rauert, N.9
Galbraith, W.10
Selitrennikoff, C.P.11
-
161
-
-
12344310625
-
Erwinia chrysanthemi requires a second iron transport route dependent of the siderophore achromobactin for extracellular growth and plant infection
-
Franza T, Mahe B, Expert D. Erwinia chrysanthemi requires a second iron transport route dependent of the siderophore achromobactin for extracellular growth and plant infection. Mol Microbiol 2005, 55(1):261-275.
-
(2005)
Mol Microbiol
, vol.55
, Issue.1
, pp. 261-275
-
-
Franza, T.1
Mahe, B.2
Expert, D.3
-
162
-
-
80053459077
-
Characterization of pyoverdine and achromobactin in Pseudomonas syringae pv. phaseolicola1448a
-
10.1186/1471-2180-11-218, 3207962, 21967163
-
Owen JG, Ackerley DF. Characterization of pyoverdine and achromobactin in Pseudomonas syringae pv. phaseolicola1448a. BMC Microbiol 2011, 11:218. 10.1186/1471-2180-11-218, 3207962, 21967163.
-
(2011)
BMC Microbiol
, vol.11
, pp. 218
-
-
Owen, J.G.1
Ackerley, D.F.2
-
163
-
-
77952883471
-
Iron uptake and metabolism in pseudomonads
-
10.1007/s00253-010-2550-2, 20352420
-
Cornelis P. Iron uptake and metabolism in pseudomonads. Appl Microbiol Biotechnol 2010, 86(6):1637-1645. 10.1007/s00253-010-2550-2, 20352420.
-
(2010)
Appl Microbiol Biotechnol
, vol.86
, Issue.6
, pp. 1637-1645
-
-
Cornelis, P.1
-
164
-
-
78650490181
-
Comparative analysis of metabolic networks provides insight into the evolution of plant pathogenic and nonpathogenic lifestyles in Pseudomonas
-
Mithani A, Hein J, Preston GM. Comparative analysis of metabolic networks provides insight into the evolution of plant pathogenic and nonpathogenic lifestyles in Pseudomonas. Mol Biol Evol 2010, 28(1):483-499.
-
(2010)
Mol Biol Evol
, vol.28
, Issue.1
, pp. 483-499
-
-
Mithani, A.1
Hein, J.2
Preston, G.M.3
-
165
-
-
0242676112
-
Plant growth promoting rhizobacteria as biofertilizers
-
Vessey KJ. Plant growth promoting rhizobacteria as biofertilizers. Plant Soil 2003, 255:571-586.
-
(2003)
Plant Soil
, vol.255
, pp. 571-586
-
-
Vessey, K.J.1
-
166
-
-
0018167549
-
Regulation and characterization of protein products coded by the nif (nitrogen fixation) genes of Klebsiella pneumoniae
-
218657, 361694
-
Roberts GP, MacNeil T, MacNeil D, Brill WJ. Regulation and characterization of protein products coded by the nif (nitrogen fixation) genes of Klebsiella pneumoniae. J Bacteriol 1978, 136(1):267-279. 218657, 361694.
-
(1978)
J Bacteriol
, vol.136
, Issue.1
, pp. 267-279
-
-
Roberts, G.P.1
MacNeil, T.2
MacNeil, D.3
Brill, W.J.4
-
167
-
-
76749127102
-
Global transcriptional analysis of nitrogen fixation and ammonium repression in root-associated Pseudomonas stutzeri A1501
-
10.1186/1471-2164-11-11, 2820453, 20053297
-
Yan Y, Ping S, Peng J, Han Y, Li L, Yang J, Dou Y, Li Y, Fan H, Fan Y, Li D, Zhan Y, Chen M, Lu W, Zhang W, Cheng Q, Jin Q, Lin M. Global transcriptional analysis of nitrogen fixation and ammonium repression in root-associated Pseudomonas stutzeri A1501. BMC Genomics 2010, 11:11. 10.1186/1471-2164-11-11, 2820453, 20053297.
-
(2010)
BMC Genomics
, vol.11
, pp. 11
-
-
Yan, Y.1
Ping, S.2
Peng, J.3
Han, Y.4
Li, L.5
Yang, J.6
Dou, Y.7
Li, Y.8
Fan, H.9
Fan, Y.10
Li, D.11
Zhan, Y.12
Chen, M.13
Lu, W.14
Zhang, W.15
Cheng, Q.16
Jin, Q.17
Lin, M.18
-
168
-
-
0023991777
-
Identification and expression of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12
-
211006, 2832370
-
Stewart V, Parales J. Identification and expression of genes narL and narX of the nar (nitrate reductase) locus in Escherichia coli K-12. J Bacteriol 1988, 170(4):1589-1597. 211006, 2832370.
-
(1988)
J Bacteriol
, vol.170
, Issue.4
, pp. 1589-1597
-
-
Stewart, V.1
Parales, J.2
-
169
-
-
0017518469
-
Nitrous oxide as end product of denitrification by strains of fluorescent pseudomonads
-
10.1139/m77-133, 195699
-
Greenberg EP, Becker GE. Nitrous oxide as end product of denitrification by strains of fluorescent pseudomonads. Can J Microbiol 1977, 23(7):903-907. 10.1139/m77-133, 195699.
-
(1977)
Can J Microbiol
, vol.23
, Issue.7
, pp. 903-907
-
-
Greenberg, E.P.1
Becker, G.E.2
-
170
-
-
0020574962
-
Comparison of denitrification by Pseudomonas stutzeri, Pseudomonas aeruginosa, and Paracoccus denitrificans
-
242446, 6407395
-
Carlson CA, Ingraham JL. Comparison of denitrification by Pseudomonas stutzeri, Pseudomonas aeruginosa, and Paracoccus denitrificans. Appl Environ Microbiol 1983, 45(4):1247-1253. 242446, 6407395.
-
(1983)
Appl Environ Microbiol
, vol.45
, Issue.4
, pp. 1247-1253
-
-
Carlson, C.A.1
Ingraham, J.L.2
-
171
-
-
0024190240
-
Denitrification in freshwater and coastal marine ecosystems: ecological and geochemical significance
-
Seitzinger SP. Denitrification in freshwater and coastal marine ecosystems: ecological and geochemical significance. Limnol Oceanogr 1988, 702-724.
-
(1988)
Limnol Oceanogr
, pp. 702-724
-
-
Seitzinger, S.P.1
-
172
-
-
0343593686
-
Phosphate solubilizing bacteria and their role in plant growth promotion
-
Rodriguez H, Fraga R. Phosphate solubilizing bacteria and their role in plant growth promotion. Biotechnol Adv 1999, 17(4-5):319-339.
-
(1999)
Biotechnol Adv
, vol.17
, Issue.4-5
, pp. 319-339
-
-
Rodriguez, H.1
Fraga, R.2
-
173
-
-
0024614063
-
Cotranscription of genes encoding indoleacetic acid production in Pseudomonas syringae subsp. savastanoi
-
209694, 2644217
-
Palm CJ, Gaffney T, Kosuge T. Cotranscription of genes encoding indoleacetic acid production in Pseudomonas syringae subsp. savastanoi. J Bacteriol 1989, 171(2):1002-1009. 209694, 2644217.
-
(1989)
J Bacteriol
, vol.171
, Issue.2
, pp. 1002-1009
-
-
Palm, C.J.1
Gaffney, T.2
Kosuge, T.3
-
174
-
-
0033777448
-
Effect of transferring 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase genes into Pseudomonas fluorescens strain CHA0 and its gacA derivative CHA96 on their growth-promoting and disease-suppressive capacities
-
Wang C, Knill E, Glick BR, Defago G. Effect of transferring 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase genes into Pseudomonas fluorescens strain CHA0 and its gacA derivative CHA96 on their growth-promoting and disease-suppressive capacities. Can J Microbiol 2000, 46(10):898-907.
-
(2000)
Can J Microbiol
, vol.46
, Issue.10
, pp. 898-907
-
-
Wang, C.1
Knill, E.2
Glick, B.R.3
Defago, G.4
-
175
-
-
38949160533
-
Pyrroloquinoline quinone is a plant growth promotion factor produced by Pseudomonas fluorescens B16
-
2245851, 18055583
-
Choi O, Kim J, Kim JG, Jeong Y, Moon JS, Park CS, Hwang I. Pyrroloquinoline quinone is a plant growth promotion factor produced by Pseudomonas fluorescens B16. Plant Physiol 2008, 146(2):657-668. 2245851, 18055583.
-
(2008)
Plant Physiol
, vol.146
, Issue.2
, pp. 657-668
-
-
Choi, O.1
Kim, J.2
Kim, J.G.3
Jeong, Y.4
Moon, J.S.5
Park, C.S.6
Hwang, I.7
-
176
-
-
0031983856
-
PqqA is not required for biosynthesis of pyrroloquinoline quinone in Methylobacterium extorquens AM1
-
Toyama H, Lidstrom ME. pqqA is not required for biosynthesis of pyrroloquinoline quinone in Methylobacterium extorquens AM1. Microbiology 1998, 144(Pt 1):183-191.
-
(1998)
Microbiology
, vol.144
, Issue.PART 1
, pp. 183-191
-
-
Toyama, H.1
Lidstrom, M.E.2
-
177
-
-
43349086724
-
Two simple media for the demonstration of pyocyanin and fluorescin
-
King EO, Ward MK, Raney DE. Two simple media for the demonstration of pyocyanin and fluorescin. J lab clin Med 1954, 44(2):301-307.
-
(1954)
J lab clin Med
, vol.44
, Issue.2
, pp. 301-307
-
-
King, E.O.1
Ward, M.K.2
Raney, D.E.3
-
178
-
-
40549120596
-
The RAST server: rapid annotations using subsystems technology
-
10.1186/1471-2164-9-75, 2265698, 18261238
-
Aziz RK, Bartels D, Best AA, DeJongh M, Disz T, Edwards RA, Formsma K, Gerdes S, Glass EM, Kubal M, Meyer F, Olsen GJ, Olson R, Osterman AL, Overbeek RA, McNeil LK, Paarmann D, Paczian T, Parrello B, Pusch GD, Reich C, Stevens R, Vassieva O, Vonstein V, Wilke A, Zagnitko O. The RAST server: rapid annotations using subsystems technology. BMC Genomics 2008, 9:75. 10.1186/1471-2164-9-75, 2265698, 18261238.
-
(2008)
BMC Genomics
, vol.9
, pp. 75
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
DeJongh, M.4
Disz, T.5
Edwards, R.A.6
Formsma, K.7
Gerdes, S.8
Glass, E.M.9
Kubal, M.10
Meyer, F.11
Olsen, G.J.12
Olson, R.13
Osterman, A.L.14
Overbeek, R.A.15
McNeil, L.K.16
Paarmann, D.17
Paczian, T.18
Parrello, B.19
Pusch, G.D.20
Reich, C.21
Stevens, R.22
Vassieva, O.23
Vonstein, V.24
Wilke, A.25
Zagnitko, O.26
more..
-
179
-
-
69949116874
-
IMG ER: a system for microbial genome annotation expert review and curation
-
10.1093/bioinformatics/btp393, 19561336
-
Markowitz VM, Mavromatis K, Ivanova NN, Chen IM, Chu K, Kyrpides NC. IMG ER: a system for microbial genome annotation expert review and curation. Bioinformatics 2009, 25(17):2271-2278. 10.1093/bioinformatics/btp393, 19561336.
-
(2009)
Bioinformatics
, vol.25
, Issue.17
, pp. 2271-2278
-
-
Markowitz, V.M.1
Mavromatis, K.2
Ivanova, N.N.3
Chen, I.M.4
Chu, K.5
Kyrpides, N.C.6
-
180
-
-
38549126643
-
KEGG for linking genomes to life and the environment
-
Kanehisa M, Araki M, Goto S, Hattori M, Hirakawa M, Itoh M, Katayama T, Kawashima S, Okuda S, Tokimatsu T, Yamanishi Y. KEGG for linking genomes to life and the environment. Nucleic Acids Res 2008, 36(Database issue):480-484.
-
(2008)
Nucleic Acids Res
, vol.36
, Issue.DATABASE ISSUE
, pp. 480-484
-
-
Kanehisa, M.1
Araki, M.2
Goto, S.3
Hattori, M.4
Hirakawa, M.5
Itoh, M.6
Katayama, T.7
Kawashima, S.8
Okuda, S.9
Tokimatsu, T.10
Yamanishi, Y.11
-
181
-
-
84860490976
-
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
-
Caspi R, Altman T, Dreher K, Fulcher CA, Subhraveti P, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Pujar A, Shearer AG, Travers M, Weerasinghe D, Zhang P, Karp PD. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res 2012, 40(Database issue):742-753.
-
(2012)
Nucleic Acids Res
, vol.40
, Issue.DATABASE ISSUE
, pp. 742-753
-
-
Caspi, R.1
Altman, T.2
Dreher, K.3
Fulcher, C.A.4
Subhraveti, P.5
Keseler, I.M.6
Kothari, A.7
Krummenacker, M.8
Latendresse, M.9
Mueller, L.A.10
Ong, Q.11
Paley, S.12
Pujar, A.13
Shearer, A.G.14
Travers, M.15
Weerasinghe, D.16
Zhang, P.17
Karp, P.D.18
-
182
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
10.1093/nar/22.22.4673, 308517, 7984417
-
Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994, 22(22):4673-4680. 10.1093/nar/22.22.4673, 308517, 7984417.
-
(1994)
Nucleic Acids Res
, vol.22
, Issue.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
183
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4(4):406-425.
-
(1987)
Mol Biol Evol
, vol.4
, Issue.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
184
-
-
33845873289
-
Interactive tree of life (iTOL): an online tool for phylogenetic tree display and annotation
-
10.1093/bioinformatics/btl529, 17050570
-
Letunic I, Bork P. Interactive tree of life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics 2007, 23(1):127-128. 10.1093/bioinformatics/btl529, 17050570.
-
(2007)
Bioinformatics
, vol.23
, Issue.1
, pp. 127-128
-
-
Letunic, I.1
Bork, P.2
|