Lactobacillus ginsenosidimutans sp. nov., isolated from kimchi with the ability to transform ginsenosides

Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology

Volumn 103, Issue 4, 2013, Pages 867-876

  Jung, Hae Min ^a   Liu, Qing Mei ^a   Kim, Jin Kwang ^a   Lee, Sung Taik ^a   Kim, Sun Chang ^a   Im, Wan Taek ^a  

^a Korea Advanced Institute of Science and Technology (KAIST)   (South Korea)

Author keywords

16S rRNA gene; Biotransformation; Ginsenoside; Lactobacillus ginsenosidimutans; Polyphasic taxonomy

Indexed keywords

BACTERIAL ENZYME; BETA GLUCOSIDASE; GINSENOSIDE; GINSENOSIDE F2; GINSENOSIDE MC1; GINSENOSIDE O; GINSENOSIDE RB 1; GINSENOSIDE RB 2; GINSENOSIDE RC; GINSENOSIDE RD; GINSENOSIDE Y; GYPENOSIDE; RIBOSOME RNA; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATION; BIOTRANSFORMATION; ENZYME ACTIVITY; LACTOBACILLUS; LACTOBACILLUS GINSENOSIDIMUTANS; LACTOBACILLUS VERSMOLDENSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; TAXONOMY;

BACTERIAL TYPING TECHNIQUES; BETA-GLUCOSIDASE; BIOTRANSFORMATION; CLUSTER ANALYSIS; DNA, BACTERIAL; DNA, RIBOSOMAL; FOOD MICROBIOLOGY; GINSENOSIDES; LACTOBACILLUS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS); LACTOBACILLUS; LACTOBACILLUS VERSMOLDENSIS; PANAX GINSENG; POSIBACTERIA;

EID: 84876695023     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-012-9868-y     Document Type: Article

References (40)

1. 1 into the rare gypenosides XVII and LXXV. Appl Environ Microbiol 76:5827-5836
2. Bae EA, Shin JE, Kim DH (2005) Metabolism of ginsenoside Re by human intestinal microflora and its estrogenic effect. Biol Pharm Bull 28:1903-1908 (Pubitemid 41437078)
3. Brashears MM, Amezquita A, Jaroni D (2005) Lactic acid bacteria and their uses in animal feeding to improve food safety. Adv Food Nutr Res 50:1-31 (Pubitemid 43588657)
4. Buck JD (1982) Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl Environ Microbiol 44:992-993 (Pubitemid 13213372)
5. Chenoll E, Macián MC, Aznar R (2005) Lactobacillus tucceti sp. nov., a new lactic acid bacterium isolated from sausage. Syst Appl Microbiol 29:389-395
6. 1 and Re from Panax ginseng by food microorganisms. Biotech Lett 27:765-771 (Pubitemid 41185999)
7. Chi H, Lee BH, You HJ, Park MS, Ji GE (2006) Differential transformation of ginsenosides from Panax ginseng by lactic acid bacteria. J Microbiol Biol 16:1629-1633 (Pubitemid 44755954)
8. 1, by human intestinal microflora. J Ginseng Res 35:301-307
9. Chun J, Lee JH, Jung Y, Kim M, Kim S, Kim BK, Lim YW (2007) EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57:2259-2261 (Pubitemid 350031697)
10. Cui CH, Choi TE, Yu H, Jin F, Lee ST, Kim SC, Im WT (2011) Mucilaginibacter composti sp. nov., with ginsenoside-converting activity, isolated from compost. J Microbiol 49:393-398
11. Ezaki T, Hashimoto Y, Yabuuchi E (1989) Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224-229
12. Felsenstein J (1985) Confidence limit on phylogenies: an approach using the bootstrap. Evolution 39:783-791
13. Fitch WM (1972) Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20:406-416
14. Haakensen M, Dobson CM, Hill JE, Ziola B (2009) Reclassification of Pediococcus dextrinicus (Coster and White 1964) Back 1978 (approved lists 1980) as Lactobacillus dextrinicus comb. nov., and emended description of the genus Lactobacillus. Int J Syst Evol Microbiol 59:615-621
15. Hall TA (1999) Bioedit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98
16. Im WT, Kim SY, Liu QM, Yang JE, Lee ST, Yi TH (2010) Nocardioides ginsengisegetis sp. nov., isolated from soil of a ginseng field. J Microbiol 48:623-628
17. Kandler O, Schillinger U, Weiss N (1983) Lactobacillus halotolerans sp. nov., nom. rev. And Lactobacillus minor sp. nov., nom. rev. Syst Appl Microbiol 4:280-285 (Pubitemid 13066315)
18. 2 in the stomach of rats. Chem Pharm Bull 39:400-404
19. Kashiwagi T, Suzuki T, Kamakura T (2009) Lactobacillus nodensis sp. nov., isolated from rice bran. Int J Syst Evol Microbiol 59:83-86
20. Kennedy DO, Scholey AB (2003) Ginseng: potential for the enhancement of cognitive performance and mood. Pharmacol Biochem Behav 75:687-700 (Pubitemid 36939174)
21. Kim DH (2009) Metabolism of ginsenosides to bioactive compounds by intestinal microflora and is industrial application. J Ginseng Res 33:165-176
22. Kim BG, Choi SY, Kim MR, Suh HJ, Park HJ (2010) Changes of ginsenosides in Korean red ginseng (Panax ginseng) fermented by Lactobacillus plantarum M1. Process Biochem 45:1319-1324
23. Kimura M (1983) The neutral theory of molecular evolution. Cambridge University Press, Cambridge
24. Kröckel L, Schillinger U, Franz CMAP, Bantleon A, Ludwig W (2003) Lactobacillus versmoldensis sp. nov., isolated from raw fermented sausage. Int J Syst Evol Microbiol 53:513-517 (Pubitemid 36416759)
25. Kumar S, Dudley J, Nei M, Tamura K (2008) MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinform 9:299-306 (Pubitemid 351890826)
26. Masood MI, Qadir MI, Shirazi JH, Khan IU (2011) Beneficial effects of lactic acid bacteria on human beings. Crit Rev Microbiol 37:91-98
27. Mesbah M, Premachandran U, Whitman WB (1989) Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159-167
28. Moore DD, Dowhan D (1995) Preparation and analysis of DNA. In: Ausubel FW, Bren R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K (eds) Current protocols in molecular biology. Wiley, New York, pp 2-11
29. Park SY, Ji GE, Ko YT, Jung HK, Ustunol Z, Pestka JJ (1999) Potentiation of hydrogen peroxide, nitric oxide, and cytokine production in RAW 264.7 macrophage cells exposed to human and commercial isolates of Bifidobacterium. Int J Food Microbiol 46:231-241 (Pubitemid 29104877)
30. 1-metabolizing β-glucosidase from fusobacterium K-60, a human intestinal anaerobic bacterium. Biosci Biotechnol Biochem 65:1163-1169 (Pubitemid 33665973)
31. Park CS, Yoo MH, Noh KH, Oh DK (2010) Biotransformation of ginsenosides by hydrolyzing the sugar moieties of ginsenosides using microbial glycosidases. Appl Microbiol Biotechnol 87:9-19
32. Quan LH, Cheng LQ, Kim HB, Kim JH, Son NR, Kim SY, Jin HO, Yang DC (2010) Bioconversion of ginsenoside Rd into compound K by Lactobacillus pentosus DC101 isolated from kimchi. J Ginseng Res 34:288-295
33. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
34. Schillinger U, Lücke FK (1987) Identification of lactobacilli from meat and meat products. Food Microbiol 4:199-208 (Pubitemid 18085853)
35. Schleifer KH, Kandler O (1972) Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36:407-477
36. Shibata S, Tanaka O, Soma K, Iita Y, Ando T, Nakamura H (1965) Studies on saponins and sapogenins of ginseng: the structure of panaxatriol. Tetrahedron Lett 3:207-213
37. Shin HY, Lee JH, Lee JY, Han YO, Han MJ, Kim DH (2003) Purification and characterization of ginsenoside Ra-hydrolyzing β-D-xylosidase from Bifidobacterium breve K-110, a human intestinal anaerobic bacterium. Biol Pharm Bull 26:1170-1173 (Pubitemid 40012584)
38. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882 (Pubitemid 28022245)
39. 2, Rc and Rd by novel beta-glucosidase hydrolyzing outer 3-O glycoside from Sphingomonas sp. 2F2: cloning, expression, and enzyme characterization. J Biotechnol 156:125-133
40. Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O, Krichevsky MI, Moore LH, Moore WEC, Murray RGE, Stackebrandt E, Starr MP, Trüper HG (1987) Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463-464