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Volumn 49, Issue 3, 2011, Pages 393-398

Mucilaginibacter composti sp. nov., with ginsenoside converting activity, isolated from compost

Author keywords

16S rRNA gene; ginsenoside; Mucilaginibacter composti; polyphasic taxonomy

Indexed keywords

BACTERIAL DNA; BETA GLUCOSIDASE; GINSENOSIDE; GINSENOSIDE RE; RIBOSOME DNA; RNA 16S;

EID: 79959766078     PISSN: 12258873     EISSN: 12258873     Source Type: Journal    
DOI: 10.1007/s12275-011-1176-0     Document Type: Article
Times cited : (37)

References (28)
  • 2
    • 76849095200 scopus 로고    scopus 로고
    • Mucilaginibacter rigui sp. nov., isolated from wetland freshwater, and emended description of the genus Mucilaginibacter
    • Baik, K. S., S. C. Park, E. M. Kim, C. H. Lim, and C. N. Seong. 2010. Mucilaginibacter rigui sp. nov., isolated from wetland freshwater, and emended description of the genus Mucilaginibacter. Int. J. Syst. Evol. Microbiol. 60, 134-139.
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 134-139
    • Baik, K.S.1    Park, S.C.2    Kim, E.M.3    Lim, C.H.4    Seong, C.N.5
  • 3
    • 0020407158 scopus 로고
    • Nonstaining (KOH) method for determination of Gram reactions of marine bacteria
    • Buck, J. D. 1982. Nonstaining (KOH) method for determination of Gram reactions of marine bacteria. Appl. Environ. Microbiol. 44, 992-993.
    • (1982) Appl. Environ. Microbiol. , vol.44 , pp. 992-993
    • Buck, J.D.1
  • 5
    • 35648991375 scopus 로고    scopus 로고
    • EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
    • Chun, J., J. H. Lee, Y. Jung, M. Kim, S. Kim, B. K. Kim, and Y. W. Lim. 2007. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int. J. Syst. Evol. Microbiol. 57, 2259-2261.
    • (2007) Int. J. Syst. Evol. Microbiol. , vol.57 , pp. 2259-2261
    • Chun, J.1    Lee, J.H.2    Jung, Y.3    Kim, M.4    Kim, S.5    Kim, B.K.6    Lim, Y.W.7
  • 6
    • 0040460179 scopus 로고    scopus 로고
    • List of bacterial names with standing in nomenclature: a folder available on the Internet
    • Euzéby, J. P. 1997. List of bacterial names with standing in nomenclature: a folder available on the Internet. Int. J. Syst. Bacteriol. 47, 590-592. (http://www. bacterio. cict. fr).
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 590-592
    • Euzéby, J.P.1
  • 7
    • 0000461280 scopus 로고
    • Confidence limit on phylogenies: an approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limit on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
    • 84959747425 scopus 로고
    • Toward defining the course of evolution: minimum change for a specific tree topology
    • Fitch, W. M. 1971. Toward defining the course of evolution: minimum change for a specific tree topology. Syst. Zool. 20, 406-416.
    • (1971) Syst. Zool. , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41, 95-98.
    • (1999) Nucleic Acids Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 10
    • 0030435636 scopus 로고    scopus 로고
    • Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection
    • Hiraishi, A., Y. Ueda, J. Ishihara, and T. Mori. 1996. Comparative lipoquinone analysis of influent sewage and activated sludge by high-performance liquid chromatography and photodiode array detection. J. Gen. Appl. Microbiol. 42, 457-469.
    • (1996) J. Gen. Appl. Microbiol. , vol.42 , pp. 457-469
    • Hiraishi, A.1    Ueda, Y.2    Ishihara, J.3    Mori, T.4
  • 11
    • 78651286987 scopus 로고    scopus 로고
    • Nocardioides ginsengisegetis sp. nov., isolated from soil of a ginseng field
    • Im, W. T., S. Y. Kim, Q. M. Liu, J. E. Yang, S. T. Lee, and T. H. Yi. 2010. Nocardioides ginsengisegetis sp. nov., isolated from soil of a ginseng field. J. Microbiol. 48, 623-628.
    • (2010) J. Microbiol. , vol.48 , pp. 623-628
    • Im, W.T.1    Kim, S.Y.2    Liu, Q.M.3    Yang, J.E.4    Lee, S.T.5    Yi, T.H.6
  • 12
    • 77954733594 scopus 로고    scopus 로고
    • Mucilaginibacter dorajii sp. nov., isolated from the rhizosphere of Platycodon grandiflorum
    • Kim, B. C., K. H. Lee, M. N. Kim, J. Lee, and K. S. Shin. 2010. Mucilaginibacter dorajii sp. nov., isolated from the rhizosphere of Platycodon grandiflorum. FEMS Microbiol. Lett. 309, 130-135.
    • (2010) FEMS Microbiol. Lett. , vol.309 , pp. 130-135
    • Kim, B.C.1    Lee, K.H.2    Kim, M.N.3    Lee, J.4    Shin, K.S.5
  • 14
    • 0004046696 scopus 로고
    • Cambridge: Cambridge University Press, Cambridge, New York, NY, USA
    • Kimura, M. 1983. The Neutral Theory of Molecular Evolution. Cambridge: Cambridge University Press, Cambridge, New York, NY, USA.
    • (1983) The Neutral Theory of Molecular Evolution
    • Kimura, M.1
  • 15
    • 45949109669 scopus 로고    scopus 로고
    • MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
    • Kumar, S., J. Dudley, M. Nei, and K. Tamura. 2008. MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief Bioinf. 9, 299-306.
    • (2008) Brief Bioinf. , vol.9 , pp. 299-306
    • Kumar, S.1    Dudley, J.2    Nei, M.3    Tamura, K.4
  • 16
    • 77954737653 scopus 로고    scopus 로고
    • Mucilaginibacter frigoritolerans sp. nov., Mucilaginibacter lappiensis sp. nov. and Mucilaginibacter mallensis sp. nov., isolated from soil and lichen samples
    • Männistö, M. K., M. Tiirola, J. McConnell, and M. M. Häggblom. 2010. Mucilaginibacter frigoritolerans sp. nov., Mucilaginibacter lappiensis sp. nov. and Mucilaginibacter mallensis sp. nov., isolated from soil and lichen samples. Int. J. Syst. Evol. Microbiol. 60, 2849-2856.
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 2849-2856
    • Männistö, M.K.1    Tiirola, M.2    McConnell, J.3    Häggblom, M.M.4
  • 17
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography
    • Mesbah, M., U. Premachandran, and W. Whitman. 1989. Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. Int. J. Syst. Bacteriol. 39, 159-167.
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.3
  • 18
    • 0003174184 scopus 로고
    • Preparation and analysis of DNA
    • F. W. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl (Eds.), New York, NY, USA: Wiley
    • Moore, D. D. and D. Dowhan. 1995. Preparation and analysis of DNA, pp. 2-11. In F. W. Ausubel, R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. (eds.), Current Protocols in Molecular Biology. Wiley, New York, NY, USA.
    • (1995) Current Protocols in Molecular Biology , pp. 2-11
    • Moore, D.D.1    Dowhan, D.2
  • 19
    • 35648957676 scopus 로고    scopus 로고
    • Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic sphagnum peat bog
    • Pankratov, T. A., B. J. Tindall, W. Liesack, and S. N. Dedysh. 2007. Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic sphagnum peat bog. Int. J. Syst. Evol. Microbiol. 57, 2349-2354.
    • (2007) Int. J. Syst. Evol. Microbiol. , vol.57 , pp. 2349-2354
    • Pankratov, T.A.1    Tindall, B.J.2    Liesack, W.3    Dedysh, S.N.4
  • 20
    • 77952890538 scopus 로고    scopus 로고
    • Biotransformation of ginsenosides by hydrolyzing the sugar moieties of ginsenosides using microbial glycosidases
    • Park, C. S., M. H. Yoo, K. H. Noh, and D. K. Oh. 2010. Biotransformation of ginsenosides by hydrolyzing the sugar moieties of ginsenosides using microbial glycosidases. Appl. Microbiol. Biotechnol. 87, 9-19.
    • (2010) Appl. Microbiol. Biotechnol. , vol.87 , pp. 9-19
    • Park, C.S.1    Yoo, M.H.2    Noh, K.H.3    Oh, D.K.4
  • 21
    • 0015909084 scopus 로고
    • Gliding motility in some non-spreading flexibacteria
    • Perry, L. B. 1973. Gliding motility in some non-spreading flexibacteria. J. Appl. Bacteriol. 36, 227-232.
    • (1973) J. Appl. Bacteriol. , vol.36 , pp. 227-232
    • Perry, L.B.1
  • 22
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou, N. and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. and B. M. Goebel. 1994. Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44, 846-849.
    • (1994) Int. J. Syst. Bacteriol. , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 25
    • 1142273245 scopus 로고    scopus 로고
    • Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates
    • Ten, L. N., W. T. Im, M. K. Kim, M. S. Kang, and S. T. Lee. 2004. Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates. J. Microbiol. Methods 56, 375-382.
    • (2004) J. Microbiol. Methods , vol.56 , pp. 375-382
    • Ten, L.N.1    Im, W.T.2    Kim, M.K.3    Kang, M.S.4    Lee, S.T.5
  • 26
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24, 4876-4882.
    • (1997) Nucleic Acids Res. , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 28
    • 67349263443 scopus 로고    scopus 로고
    • Highly selective biotransformation of ginsenoside Rb1 to Rd by the phytopathogenic fungus Cladosporium fulvum (syn. Fulvia fulva)
    • Zhao, X., J. Wang, J. Li, L. Fu, J. Gao, X. Du, H. Bi, Y. Zhou, and G. Tai. 2009. Highly selective biotransformation of ginsenoside Rb1 to Rd by the phytopathogenic fungus Cladosporium fulvum (syn. Fulvia fulva). J. Ind. Microbiol. Biotechnol. 36, 721-726.
    • (2009) J. Ind. Microbiol. Biotechnol. , vol.36 , pp. 721-726
    • Zhao, X.1    Wang, J.2    Li, J.3    Fu, L.4    Gao, J.5    Du, X.6    Bi, H.7    Zhou, Y.8    Tai, G.9


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