-
1
-
-
20344370764
-
Allosteric mechanisms of signal transduction
-
Changeux, J. P., and Edelstein, S. J. (2005) Allosteric mechanisms of signal transduction. Science 308, 1424-1428
-
(2005)
Science
, vol.308
, pp. 1424-1428
-
-
Changeux, J.P.1
Edelstein, S.J.2
-
2
-
-
37249067732
-
The origin of protein interactions and allostery in colocalization
-
Kuriyan, J., and Eisenberg, D. (2007) The origin of protein interactions and allostery in colocalization. Nature 450, 983-990
-
(2007)
Nature
, vol.450
, pp. 983-990
-
-
Kuriyan, J.1
Eisenberg, D.2
-
3
-
-
68149157248
-
The origin of allosteric functional modulation. Multiple pre-existing pathways
-
del Sol, A., Tsai, C. J., Ma, B., and Nussinov, R. (2009) The origin of allosteric functional modulation. Multiple pre-existing pathways. Structure 17, 1042-1050
-
(2009)
Structure
, vol.17
, pp. 1042-1050
-
-
Del Sol, A.1
Tsai, C.J.2
Ma, B.3
Nussinov, R.4
-
4
-
-
79955472800
-
ARaf-induced allosteric transition of KSR stimulates phosphorylation of MEK
-
Brennan, D. F., Dar, A. C., Hertz, N. T., Chao, W. C., Burlingame, A. L., Shokat, K. M., and Barford, D. (2011)ARaf-induced allosteric transition of KSR stimulates phosphorylation of MEK. Nature 472, 366-369
-
(2011)
Nature
, vol.472
, pp. 366-369
-
-
Brennan, D.F.1
Dar, A.C.2
Hertz, N.T.3
Chao, W.C.4
Burlingame, A.L.5
Shokat, K.M.6
Barford, D.7
-
5
-
-
0014216883
-
Allosteric properties of phosphorylase b. II. Comparison with a kinetic model
-
Madsen, N. B., and Shechosky, S. (1967) Allosteric properties of phosphorylase b. II. Comparison with a kinetic model. J. Biol. Chem. 242, 3301-3307
-
(1967)
J. Biol. Chem.
, vol.242
, pp. 3301-3307
-
-
Madsen, N.B.1
Shechosky, S.2
-
6
-
-
59649092937
-
Allosteric regulation of proteases
-
Hauske, P., Ottmann, C., Meltzer, M., Ehrmann, M., and Kaiser, M. (2008) Allosteric regulation of proteases. Chembiochem 9, 2920-2928
-
(2008)
Chembiochem
, vol.9
, pp. 2920-2928
-
-
Hauske, P.1
Ottmann, C.2
Meltzer, M.3
Ehrmann, M.4
Kaiser, M.5
-
7
-
-
69249100500
-
Human caspases. Activation, specificity, and regulation
-
Pop, C., and Salvesen, G. S. (2009) Human caspases. Activation, specificity, and regulation. J. Biol. Chem. 284, 21777-21781
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 21777-21781
-
-
Pop, C.1
Salvesen, G.S.2
-
8
-
-
48749120889
-
An allosteric circuit in caspase-1
-
Datta, D., Scheer, J. M., Romanowski, M. J., and Wells, J. A. (2008) An allosteric circuit in caspase-1. J. Mol. Biol. 381, 1157-1167
-
(2008)
J. Mol. Biol.
, vol.381
, pp. 1157-1167
-
-
Datta, D.1
Scheer, J.M.2
Romanowski, M.J.3
Wells, J.A.4
-
9
-
-
0024551325
-
A pre-aspartate-specific protease from human leukocytes that cleaves pro-interleukin-1β
-
Black, R. A., Kronheim, S. R., Merriam, J. E., March, C. J., and Hopp, T. P. (1989) A pre-aspartate-specific protease from human leukocytes that cleaves pro-interleukin-1β. J. Biol. Chem. 264, 5323-5326
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 5323-5326
-
-
Black, R.A.1
Kronheim, S.R.2
Merriam, J.E.3
March, C.J.4
Hopp, T.P.5
-
10
-
-
0002928890
-
Identification of a monocyte specific pre-interleukin 1β convertase activity
-
Kostura, M. J., Tocci, M. J., Limjuco, G., Chin, J., Cameron, P., Hillman, A. G., Chartrain, N. A., and Schmidt, J. A. (1989) Identification of a monocyte specific pre-interleukin 1β convertase activity. Proc. Natl. Acad. Sci. U.S.A. 86, 5227-5231
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 5227-5231
-
-
Kostura, M.J.1
Tocci, M.J.2
Limjuco, G.3
Chin, J.4
Cameron, P.5
Hillman, A.G.6
Chartrain, N.A.7
Schmidt, J.A.8
-
11
-
-
0026517239
-
Molecular cloning of the interleukin-1β converting enzyme
-
Cerretti, D. P., Kozlosky, C. J., Mosley, B., Nelson, N., Van Ness, K., Greenstreet, T. A., March, C. J., Kronheim, S. R., Druck, T., and Cannizzaro, L. A. (1992) Molecular cloning of the interleukin-1β converting enzyme. Science 256, 97-100
-
(1992)
Science
, vol.256
, pp. 97-100
-
-
Cerretti, D.P.1
Kozlosky, C.J.2
Mosley, B.3
Nelson, N.4
Van Ness, K.5
Greenstreet, T.A.6
March, C.J.7
Kronheim, S.R.8
Druck, T.9
Cannizzaro, L.A.10
-
12
-
-
0026507126
-
A novel heterodimeric cysteine protease is required for interleukin-1β processing in monocytes
-
Thornberry, N. A., Bull, H. G., Calaycay, J. R., Chapman, K. T., Howard, A. D., Kostura, M. J., Miller, D. K., Molineaux, S. M., Weidner, J. R., and Aunins, J. (1992) A novel heterodimeric cysteine protease is required for interleukin-1β processing in monocytes. Nature 356, 768-774
-
(1992)
Nature
, vol.356
, pp. 768-774
-
-
Thornberry, N.A.1
Bull, H.G.2
Calaycay, J.R.3
Chapman, K.T.4
Howard, A.D.5
Kostura, M.J.6
Miller, D.K.7
Molineaux, S.M.8
Weidner, J.R.9
Aunins, J.10
-
13
-
-
0028170376
-
Structure and mechanism of interleukin-1 α converting enzyme
-
Wilson, K. P., Black, J. A., Thomson, J. A., Kim, E. E., Griffith, J. P., Navia, M. A., Murcko, M. A., Chambers, S. P., Aldape, R. A., and Raybuck, S. A. (1994) Structure and mechanism of interleukin-1 α converting enzyme. Nature 370, 270-275
-
(1994)
Nature
, vol.370
, pp. 270-275
-
-
Wilson, K.P.1
Black, J.A.2
Thomson, J.A.3
Kim, E.E.4
Griffith, J.P.5
Navia, M.A.6
Murcko, M.A.7
Chambers, S.P.8
Aldape, R.A.9
Raybuck, S.A.10
-
14
-
-
0029832699
-
Stability and oligomeric equilibria of refolded interleukin-1β converting enzyme
-
Talanian, R. V., Dang, L. C., Ferenz, C. R., Hackett, M. C., Mankovich, J. A., Welch, J. P., Wong, W. W., and Brady, K. D. (1996) Stability and oligomeric equilibria of refolded interleukin-1β converting enzyme. J. Biol. Chem. 271, 21853-21858
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 21853-21858
-
-
Talanian, R.V.1
Dang, L.C.2
Ferenz, C.R.3
Hackett, M.C.4
Mankovich, J.A.5
Welch, J.P.6
Wong, W.W.7
Brady, K.D.8
-
15
-
-
4143096903
-
Crystal structures of a ligand-free and malonate-bound human caspase-1. Implications for the mechanism of substrate binding
-
Romanowski, M. J., Scheer, J. M., O'Brien, T., and McDowell, R. S. (2004) Crystal structures of a ligand-free and malonate-bound human caspase-1. Implications for the mechanism of substrate binding. Structure 12, 1361-1371
-
(2004)
Structure
, vol.12
, pp. 1361-1371
-
-
Romanowski, M.J.1
Scheer, J.M.2
O'brien, T.3
McDowell, R.S.4
-
16
-
-
15744387616
-
Malonate-assisted purification of human caspases
-
Scheer, J. M., Wells, J. A., and Romanowski, M. J. (2005) Malonate-assisted purification of human caspases. Protein Expr. Purif. 41, 148-153
-
(2005)
Protein Expr. Purif.
, vol.41
, pp. 148-153
-
-
Scheer, J.M.1
Wells, J.A.2
Romanowski, M.J.3
-
17
-
-
0034009520
-
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling
-
Schuck, P. (2000) Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling. Biophys. J. 78, 1606-1619
-
(2000)
Biophys. J.
, vol.78
, pp. 1606-1619
-
-
Schuck, P.1
-
18
-
-
1442274756
-
Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition
-
Vistica, J., Dam, J., Balbo, A., Yikilmaz, E., Mariuzza, R. A., Rouault, T. A., and Schuck, P. (2004) Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition. Anal. Biochem. 326, 234-256
-
(2004)
Anal. Biochem.
, vol.326
, pp. 234-256
-
-
Vistica, J.1
Dam, J.2
Balbo, A.3
Yikilmaz, E.4
Mariuzza, R.A.5
Rouault, T.A.6
Schuck, P.7
-
19
-
-
0032847318
-
Caspases. Preparation and characterization
-
Stennicke, H. R., and Salvesen, G. S. (1999) Caspases. Preparation and characterization. Methods 17, 313-319
-
(1999)
Methods
, vol.17
, pp. 313-319
-
-
Stennicke, H.R.1
Salvesen, G.S.2
-
20
-
-
0031080252
-
A combinatorial approach for determining protease specificities. Application to interleukin-1β converting enzyme (ICE)
-
Rano, T. A., Timkey, T., Peterson, E. P., Rotonda, J., Nicholson, D. W., Becker, J. W., Chapman, K. T., and Thornberry, N. A. (1997) A combinatorial approach for determining protease specificities. Application to interleukin-1β converting enzyme (ICE). Chem. Biol. 4, 149-155
-
(1997)
Chem. Biol.
, vol.4
, pp. 149-155
-
-
Rano, T.A.1
Timkey, T.2
Peterson, E.P.3
Rotonda, J.4
Nicholson, D.W.5
Becker, J.W.6
Chapman, K.T.7
Thornberry, N.A.8
-
21
-
-
0030948457
-
Substrate specificities of caspase family proteases
-
Talanian, R. V., Quinlan, C., Trautz, S., Hackett, M. C., Mankovich, J. A., Banach, D., Ghayur, T., Brady, K. D., and Wong, W. W. (1997) Substrate specificities of caspase family proteases. J. Biol. Chem. 272, 9677-9682
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 9677-9682
-
-
Talanian, R.V.1
Quinlan, C.2
Trautz, S.3
Hackett, M.C.4
Mankovich, J.A.5
Banach, D.6
Ghayur, T.7
Brady, K.D.8
Wong, W.W.9
-
22
-
-
0030849093
-
A combinatorial approach defines specificities of members of the caspase family and granzyme B. Functional relationships established for key mediators of apoptosis
-
Thornberry, N. A., Rano, T. A., Peterson, E. P., Rasper, D. M., Timkey, T., Garcia-Calvo, M., Houtzager, V. M., Nordstrom, P. A., Roy, S., Vaillancourt, J. P., Chapman, K. T., and Nicholson, D. W. (1997) A combinatorial approach defines specificities of members of the caspase family and granzyme B. Functional relationships established for key mediators of apoptosis. J. Biol. Chem. 272, 17907-17911
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 17907-17911
-
-
Thornberry, N.A.1
Rano, T.A.2
Peterson, E.P.3
Rasper, D.M.4
Timkey, T.5
Garcia-Calvo, M.6
Houtzager, V.M.7
Nordstrom, P.A.8
Roy, S.9
Vaillancourt, J.P.10
Chapman, K.T.11
Nicholson, D.W.12
-
23
-
-
79951578449
-
Inflammasomes. Current understanding and open questions
-
Bauernfeind, F., Ablasser, A., Bartok, E., Kim, S., Schmid-Burgk, J., Cavlar, T., and Hornung, V. (2011) Inflammasomes. Current understanding and open questions. Cell. Mol. Life Sci. 68, 765-783
-
(2011)
Cell. Mol. Life Sci.
, vol.68
, pp. 765-783
-
-
Bauernfeind, F.1
Ablasser, A.2
Bartok, E.3
Kim, S.4
Schmid-Burgk, J.5
Cavlar, T.6
Hornung, V.7
-
24
-
-
33646727594
-
A common allosteric site and mechanism in caspases
-
Scheer, J. M., Romanowski, M. J., and Wells, J. A. (2006) A common allosteric site and mechanism in caspases. Proc. Natl. Acad. Sci. U.S.A. 103, 7595-7600
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 7595-7600
-
-
Scheer, J.M.1
Romanowski, M.J.2
Wells, J.A.3
-
25
-
-
0028674139
-
Interleukin-1 β converting enzyme
-
Thornberry, N. A. (1994) Interleukin-1 β converting enzyme. Methods Enzymol. 244, 615-631
-
(1994)
Methods Enzymol.
, vol.244
, pp. 615-631
-
-
Thornberry, N.A.1
-
26
-
-
0037291890
-
Insights into the regulatory mechanism for caspase-8 activation
-
Donepudi, M., Mac Sweeney, A., Briand, C., and Grütter, M. G. (2003) Insights into the regulatory mechanism for caspase-8 activation. Molecular Cell 11, 543-549
-
(2003)
Molecular Cell
, vol.11
, pp. 543-549
-
-
Donepudi, M.1
Mac Sweeney, A.2
Briand, C.3
Grütter, M.G.4
-
27
-
-
11144221992
-
PH effects on the stability and dimerization of procaspase-3
-
Bose, K., and Clark, A. C. (2005) pH effects on the stability and dimerization of procaspase-3. Protein Science 14, 24-36
-
(2005)
Protein Science
, vol.14
, pp. 24-36
-
-
Bose, K.1
Clark, A.C.2
-
28
-
-
70350107735
-
The crystal structure of caspase-6, a selective effector of axonal degeneration
-
Baumgartner, R., Meder, G., Briand, C., Decock, A., D'arcy, A., Hassiepen, U., Morse, R., and Renatus, M. (2009) The crystal structure of caspase-6, a selective effector of axonal degeneration. Biochem. J. 423, 429-439
-
(2009)
Biochem. J.
, vol.423
, pp. 429-439
-
-
Baumgartner, R.1
Meder, G.2
Briand, C.3
Decock, A.4
D'arcy, A.5
Hassiepen, U.6
Morse, R.7
Renatus, M.8
-
29
-
-
0037291737
-
Mechanism of XIAP-mediated inhibition of caspase-9
-
Shiozaki, E. N., Chai, J., Rigotti, D. J., Riedl, S. J., Li, P., Srinivasula, S. M., Alnemri, E. S., Fairman, R., and Shi, Y. (2003) Mechanism of XIAP-mediated inhibition of caspase-9. Mol. Cell 11, 519-527
-
(2003)
Mol. Cell
, vol.11
, pp. 519-527
-
-
Shiozaki, E.N.1
Chai, J.2
Rigotti, D.J.3
Riedl, S.J.4
Li, P.5
Srinivasula, S.M.6
Alnemri, E.S.7
Fairman, R.8
Shi, Y.9
-
30
-
-
79151469464
-
Substrate-induced conformational changes occur in all cleaved forms of caspase-6
-
Vaidya, S., Velázquez-Delgado, E. M., Abbruzzese, G., and Hardy, J. A. (2011) Substrate-induced conformational changes occur in all cleaved forms of caspase-6. J. Mol. Biol. 406, 75-91
-
(2011)
J. Mol. Biol.
, vol.406
, pp. 75-91
-
-
Vaidya, S.1
Velázquez-Delgado, E.M.2
Abbruzzese, G.3
Hardy, J.A.4
-
31
-
-
62549093913
-
Two-state selection of conformation-specific antibodies
-
Gao, J., Sidhu, S. S., and Wells, J. A. (2009) Two-state selection of conformation-specific antibodies. Proc. Natl. Acad. Sci. U.S.A. 106, 3071-3076
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 3071-3076
-
-
Gao, J.1
Sidhu, S.S.2
Wells, J.A.3
-
32
-
-
0035798361
-
Crystal structure of a procaspase-7 zymogen. Mechanisms of activation and substrate binding
-
Chai, J., Wu, Q., Shiozaki, E., Srinivasula, S. M., Alnemri, E. S., and Shi, Y. (2001) Crystal structure of a procaspase-7 zymogen. Mechanisms of activation and substrate binding. Cell 107, 399-407
-
(2001)
Cell
, vol.107
, pp. 399-407
-
-
Chai, J.1
Wu, Q.2
Shiozaki, E.3
Srinivasula, S.M.4
Alnemri, E.S.5
Shi, Y.6
-
33
-
-
8044252166
-
Expression of a dominant negative mutant of interleukin-1β -converting enzyme in transgenic mice prevents neuronal cell death induced by trophic factor withdrawal and ischemic brain injury
-
Friedlander, R. M., Gagliardini, V., Hara, H., Fink, K. B., Li, W., MacDonald, G., Fishman, M. C., Greenberg, A. H., Moskowitz, M. A., and Yuan, J. (1997) Expression of a dominant negative mutant of interleukin-1β -converting enzyme in transgenic mice prevents neuronal cell death induced by trophic factor withdrawal and ischemic brain injury. J. Exp. Med. 185, 933-940
-
(1997)
J. Exp. Med.
, vol.185
, pp. 933-940
-
-
Friedlander, R.M.1
Gagliardini, V.2
Hara, H.3
Fink, K.B.4
Li, W.5
MacDonald, G.6
Fishman, M.C.7
Greenberg, A.H.8
Moskowitz, M.A.9
Yuan, J.10
-
34
-
-
0033587128
-
Inhibition of caspase-1 slows disease progression in a mouse model of Huntington's disease
-
Ona, V. O., Li, M., Vonsattel, J. P., Andrews, L. J., Khan, S. Q., Chung, W. M., Frey, A. S., Menon, A. S., Li, X. J., Stieg, P. E., Yuan, J., Penney, J. B., Young, A. B., Cha, J. H., and Friedlander, R. M. (1999) Inhibition of caspase-1 slows disease progression in a mouse model of Huntington's disease. Nature 399, 263-267
-
(1999)
Nature
, vol.399
, pp. 263-267
-
-
Ona, V.O.1
Li, M.2
Vonsattel, J.P.3
Andrews, L.J.4
Khan, S.Q.5
Chung, W.M.6
Frey, A.S.7
Menon, A.S.8
Li, X.J.9
Stieg, P.E.10
Yuan, J.11
Penney, J.B.12
Young, A.B.13
Cha, J.H.14
Friedlander, R.M.15
-
35
-
-
52649141086
-
Global sequencing of proteolytic cleavage sites in apoptosis by specific labeling of protein N termini
-
Mahrus, S., Trinidad, J. C., Barkan, D. T., Sali, A., Burlingame, A. L., and Wells, J. A. (2008) Global sequencing of proteolytic cleavage sites in apoptosis by specific labeling of protein N termini. Cell 134, 866-876
-
(2008)
Cell
, vol.134
, pp. 866-876
-
-
Mahrus, S.1
Trinidad, J.C.2
Barkan, D.T.3
Sali, A.4
Burlingame, A.L.5
Wells, J.A.6
-
36
-
-
77951805919
-
Inflammatory stimuli regulate caspase substrate profiles
-
Agard, N. J., Maltby, D., and Wells, J. A. (2010) Inflammatory stimuli regulate caspase substrate profiles. Mol. Cell. Proteomics 9, 880-893
-
(2010)
Mol. Cell. Proteomics
, vol.9
, pp. 880-893
-
-
Agard, N.J.1
Maltby, D.2
Wells, J.A.3
-
37
-
-
33646072818
-
The P2X7 receptor. A key player in IL-1 processing and release
-
Ferrari, D., Pizzirani, C., Adinolfi, E., Lemoli, R. M., Curti, A., Idzko, M., Panther, E., and Di Virgilio, F. (2006) The P2X7 receptor. A key player in IL-1 processing and release. J. Immunol. 176, 3877-3883
-
(2006)
J. Immunol.
, vol.176
, pp. 3877-3883
-
-
Ferrari, D.1
Pizzirani, C.2
Adinolfi, E.3
Lemoli, R.M.4
Curti, A.5
Idzko, M.6
Panther, E.7
Di Virgilio, F.8
-
38
-
-
3042800587
-
Phospholipases C and A2 control lysosome-mediated IL-1 β secretion. Implications for inflammatory processes
-
Andrei, C., Margiocco, P., Poggi, A., Lotti, L. V., Torrisi, M. R., and Rubartelli, A. (2004) Phospholipases C and A2 control lysosome-mediated IL-1 β secretion. Implications for inflammatory processes. Proc. Natl. Acad. Sci. U.S.A. 101, 9745-9750
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 9745-9750
-
-
Andrei, C.1
Margiocco, P.2
Poggi, A.3
Lotti, L.V.4
Torrisi, M.R.5
Rubartelli, A.6
-
39
-
-
0035655395
-
Rapid secretion of interleukin-1β by microvesicle shedding
-
MacKenzie, A., Wilson, H. L., Kiss-Toth, E., Dower, S. K., North, R. A., and Surprenant, A. (2001) Rapid secretion of interleukin-1β by microvesicle shedding. Immunity 15, 825-835
-
(2001)
Immunity
, vol.15
, pp. 825-835
-
-
MacKenzie, A.1
Wilson, H.L.2
Kiss-Toth, E.3
Dower, S.K.4
North, R.A.5
Surprenant, A.6
-
40
-
-
33747011616
-
Engineered hybrid dimers: Tracking the activation pathway of caspase-7
-
Denault, J.-B., Bekes, M., Scott, F. L., Sexton, K. M. B., Bogyo, M., and Salvesen, G. S. (2006) Engineered hybrid dimers: tracking the activation pathway of caspase-7. Mol. Cell 23, 523-533
-
(2006)
Mol. Cell
, vol.23
, pp. 523-533
-
-
Denault, J.-B.1
Bekes, M.2
Scott, F.L.3
Sexton, K.M.B.4
Bogyo, M.5
Salvesen, G.S.6
|