메뉴 건너뛰기




Volumn 14, Issue 1, 2013, Pages

Comparative genome analysis of Streptococcus infantarius subsp. infantarius CJ18, an African fermented camel milk isolate with adaptations to dairy environment

Author keywords

Africa; Camel; Dairy fermentation; Health risk; Lactose metabolism; Streptococcus bovis Streptococcus equinus complex; Streptococcus gallolyticus subsp. macedonicus; Streptococcus infantarius; Streptococcus thermophilus; Streptococcus virulence factors

Indexed keywords

BACTERIAL POLYSACCHARIDE; LACTOSE; TRANSPOSASE; VIRULENCE FACTOR;

EID: 84875126449     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-14-200     Document Type: Article
Times cited : (43)

References (99)
  • 1
    • 61549115001 scopus 로고    scopus 로고
    • Ecology and pathogenicity of gastrointestinal Streptococcus bovis
    • Herrera P, Min Kwon Y, Ricke SC. Ecology and pathogenicity of gastrointestinal Streptococcus bovis. Anaerobe 2009, 15:44-54.
    • (2009) Anaerobe , vol.15 , pp. 44-54
    • Herrera, P.1    Min Kwon, Y.2    Ricke, S.C.3
  • 2
    • 84858698714 scopus 로고    scopus 로고
    • Lactic acid bacteria diversity of African raw and fermented camel milk products reveals a highly competitive, potentially health-threatening predominant microflora
    • Jans C, Bugnard J, Njage PMK, Lacroix C, Meile L. Lactic acid bacteria diversity of African raw and fermented camel milk products reveals a highly competitive, potentially health-threatening predominant microflora. LWT-Food Sci Technol 2012, 47:371-379.
    • (2012) LWT-Food Sci Technol , vol.47 , pp. 371-379
    • Jans, C.1    Bugnard, J.2    Njage, P.M.K.3    Lacroix, C.4    Meile, L.5
  • 3
    • 0038316363 scopus 로고    scopus 로고
    • Reappraisal of the taxonomy of the Streptococcus bovis/Streptococcus equinus complex and related species: description of Streptococcus gallolyticus subsp. gallolyticus subsp. nov., S. gallolyticus subsp. macedonicus subsp. nov. and S. gallolyticus subsp. pasteurianus subsp. nov.
    • Schlegel L, Grimont F, Ageron E, Grimont PAD, Bouvet A. Reappraisal of the taxonomy of the Streptococcus bovis/Streptococcus equinus complex and related species: description of Streptococcus gallolyticus subsp. gallolyticus subsp. nov., S. gallolyticus subsp. macedonicus subsp. nov. and S. gallolyticus subsp. pasteurianus subsp. nov. Int J Syst Evol Microbiol 2003, 53:631-645.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 631-645
    • Schlegel, L.1    Grimont, F.2    Ageron, E.3    Grimont, P.A.D.4    Bouvet, A.5
  • 4
    • 0033854623 scopus 로고    scopus 로고
    • Streptococcus infantarius sp. nov., Streptococcus infantarius subsp. infantarius subsp. nov. and Streptococcus infantarius subsp. coli subsp. nov., isolated from humans and food
    • Schlegel L, Grimont F, Collins MD, Régnault B, Grimont PAD, Bouvet A. Streptococcus infantarius sp. nov., Streptococcus infantarius subsp. infantarius subsp. nov. and Streptococcus infantarius subsp. coli subsp. nov., isolated from humans and food. Int J Syst Evol Microbiol 2000, 50:1425-1434.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1425-1434
    • Schlegel, L.1    Grimont, F.2    Collins, M.D.3    Régnault, B.4    Grimont, P.A.D.5    Bouvet, A.6
  • 5
    • 84871792350 scopus 로고    scopus 로고
    • Analysis of lactic acid bacteria communities and their seasonal variations in a spontaneously fermented dairy product (Malian fènè) by applying a cultivation/genotype-based binary model
    • Wullschleger S, Lacroix C, Bonfoh B, Sissoko-Thiam A, Hugenschmidt S, Romanens E, Baumgartner S, Traoré I, Yaffee M, Jans C, Meile L. Analysis of lactic acid bacteria communities and their seasonal variations in a spontaneously fermented dairy product (Malian fènè) by applying a cultivation/genotype-based binary model. Int Dairy J 2013, 29:28-35.
    • (2013) Int Dairy J , vol.29 , pp. 28-35
    • Wullschleger, S.1    Lacroix, C.2    Bonfoh, B.3    Sissoko-Thiam, A.4    Hugenschmidt, S.5    Romanens, E.6    Baumgartner, S.7    Traoré, I.8    Yaffee, M.9    Jans, C.10    Meile, L.11
  • 6
    • 53149148865 scopus 로고    scopus 로고
    • A traditional Sudanese fermented camel's milk product, Gariss, as a habitat of Streptococcus infantarius subsp. infantarius
    • Abdelgadir W, Nielsen DS, Hamad S, Jakobsen M. A traditional Sudanese fermented camel's milk product, Gariss, as a habitat of Streptococcus infantarius subsp. infantarius. Int J Food Microbiol 2008, 127:215-219.
    • (2008) Int J Food Microbiol , vol.127 , pp. 215-219
    • Abdelgadir, W.1    Nielsen, D.S.2    Hamad, S.3    Jakobsen, M.4
  • 7
    • 84859162556 scopus 로고    scopus 로고
    • Novel Streptococcus infantarius subsp. infantarius variants harboring lactose metabolism genes homologous to Streptococcus thermophilus
    • Jans C, Gerber A, Bugnard J, Njage PMK, Lacroix C, Meile L. Novel Streptococcus infantarius subsp. infantarius variants harboring lactose metabolism genes homologous to Streptococcus thermophilus. Food Microbiol 2012, 31:33-42.
    • (2012) Food Microbiol , vol.31 , pp. 33-42
    • Jans, C.1    Gerber, A.2    Bugnard, J.3    Njage, P.M.K.4    Lacroix, C.5    Meile, L.6
  • 8
    • 0042029638 scopus 로고    scopus 로고
    • Microbial and physiological characterization of weakly amylolytic but fast-growing lactic acid bacteria: a functional role in supporting microbial diversity in pozol, a Mexican fermented maize beverage
    • Díaz-Ruiz G, Guyot JP, Ruiz-Teran F, Morlon-Guyot J, Wacher C. Microbial and physiological characterization of weakly amylolytic but fast-growing lactic acid bacteria: a functional role in supporting microbial diversity in pozol, a Mexican fermented maize beverage. Appl Environ Microbiol 2003, 69:4367-4374.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 4367-4374
    • Díaz-Ruiz, G.1    Guyot, J.P.2    Ruiz-Teran, F.3    Morlon-Guyot, J.4    Wacher, C.5
  • 9
    • 0036022455 scopus 로고    scopus 로고
    • Taxonomic dissection of the Streptococcus bovis group by analysis of manganese-dependent superoxide dismutase gene (sodA) sequences: reclassification of 'Streptococcus infantarius subsp. coli' as Streptococcus lutetiensis sp. nov. and of Streptococcus bovis biotype II.2 as Streptococcus pasteurianus sp. nov
    • Poyart C, Quesne G, Trieu-Cuot P. Taxonomic dissection of the Streptococcus bovis group by analysis of manganese-dependent superoxide dismutase gene (sodA) sequences: reclassification of 'Streptococcus infantarius subsp. coli' as Streptococcus lutetiensis sp. nov. and of Streptococcus bovis biotype II.2 as Streptococcus pasteurianus sp. nov. Int J Syst Evol Microbiol 2002, 52:1247-1255.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1247-1255
    • Poyart, C.1    Quesne, G.2    Trieu-Cuot, P.3
  • 10
    • 53649096807 scopus 로고    scopus 로고
    • Comprehensive study of strains previously designated Streptococcus bovis consecutively isolated from human blood cultures and emended description of Streptococcus gallolyticus and Streptococcus infantarius subsp. coli
    • Beck M, Frodl R, Funke G. Comprehensive study of strains previously designated Streptococcus bovis consecutively isolated from human blood cultures and emended description of Streptococcus gallolyticus and Streptococcus infantarius subsp. coli. J Clin Microbiol 2008, 46:2966-2972.
    • (2008) J Clin Microbiol , vol.46 , pp. 2966-2972
    • Beck, M.1    Frodl, R.2    Funke, G.3
  • 12
    • 79651473958 scopus 로고    scopus 로고
    • Molecular detection, quantification, and isolation of Streptococcus gallolyticus bacteria colonizing colorectal tumors: inflammation-driven potential of carcinogenesis via IL-1, COX-2, and IL-8
    • Abdulamir AS, Hafidh RR, Abu Bakar F. Molecular detection, quantification, and isolation of Streptococcus gallolyticus bacteria colonizing colorectal tumors: inflammation-driven potential of carcinogenesis via IL-1, COX-2, and IL-8. Mol Cancer 2010, 9:249.
    • (2010) Mol Cancer , vol.9 , pp. 249
    • Abdulamir, A.S.1    Hafidh, R.R.2    Abu Bakar, F.3
  • 15
    • 54249169167 scopus 로고    scopus 로고
    • Adherence characteristics of endocarditis-derived Streptococcus gallolyticus ssp. gallolyticus (Streptococcus bovis biotype I) isolates to host extracellular matrix proteins
    • Sillanpää J, Nallapareddy SR, Singh KV, Ferraro MJ, Murray BE. Adherence characteristics of endocarditis-derived Streptococcus gallolyticus ssp. gallolyticus (Streptococcus bovis biotype I) isolates to host extracellular matrix proteins. FEMS Microbiol Lett 2008, 289:104-109.
    • (2008) FEMS Microbiol Lett , vol.289 , pp. 104-109
    • Sillanpää, J.1    Nallapareddy, S.R.2    Singh, K.V.3    Ferraro, M.J.4    Murray, B.E.5
  • 16
    • 77950397758 scopus 로고    scopus 로고
    • Interactions between endocarditis-derived Streptococcus gallolyticus subsp gallolyticus isolates and human endothelial cells
    • Vollmer T, Hinse D, Kleesiek K, Dreier J. Interactions between endocarditis-derived Streptococcus gallolyticus subsp gallolyticus isolates and human endothelial cells. BMC Microbiol 2010, 10:78.
    • (2010) BMC Microbiol , vol.10 , pp. 78
    • Vollmer, T.1    Hinse, D.2    Kleesiek, K.3    Dreier, J.4
  • 17
    • 84877591343 scopus 로고    scopus 로고
    • Characterisation of Streptococcus gallolyticus subsp gallolyticus virulence factors
    • Hinse D, Vollmer T, Kleesiek K, Dreier J. Characterisation of Streptococcus gallolyticus subsp gallolyticus virulence factors. Int J Med Microbiol 2008, 298:64.
    • (2008) Int J Med Microbiol , vol.298 , pp. 64
    • Hinse, D.1    Vollmer, T.2    Kleesiek, K.3    Dreier, J.4
  • 18
    • 0032896501 scopus 로고    scopus 로고
    • Glucansucrases: mechanism of action and structure-function relationships
    • Monchois V, Willemot RM, Monsan P. Glucansucrases: mechanism of action and structure-function relationships. FEMS Microbiol Rev 1999, 23:131-151.
    • (1999) FEMS Microbiol Rev , vol.23 , pp. 131-151
    • Monchois, V.1    Willemot, R.M.2    Monsan, P.3
  • 19
    • 19744367811 scopus 로고    scopus 로고
    • Glucosyltransferases of viridans streptococci are modulins of interleukin-6 induction in infective endocarditis
    • Shun CT, Lu SY, Yeh CY, Chiang CP, Chia JS, Chen JY. Glucosyltransferases of viridans streptococci are modulins of interleukin-6 induction in infective endocarditis. Infect Immun 2005, 73:3261-3270.
    • (2005) Infect Immun , vol.73 , pp. 3261-3270
    • Shun, C.T.1    Lu, S.Y.2    Yeh, C.Y.3    Chiang, C.P.4    Chia, J.S.5    Chen, J.Y.6
  • 21
    • 84868626643 scopus 로고    scopus 로고
    • Virulence or niche factors: what's in a name?
    • Hill C. Virulence or niche factors: what's in a name?. J Bacteriol 2012, 194:5725-5727.
    • (2012) J Bacteriol , vol.194 , pp. 5725-5727
    • Hill, C.1
  • 22
    • 42449112980 scopus 로고    scopus 로고
    • Association between Streptococcus infantarius (formerly S. bovis II/I) bacteremia and noncolonic cancer
    • Corredoira J, Alonso MP, Coira A, Varela J. Association between Streptococcus infantarius (formerly S. bovis II/I) bacteremia and noncolonic cancer. J Clin Microbiol 2008, 46:1570.
    • (2008) J Clin Microbiol , vol.46 , pp. 1570
    • Corredoira, J.1    Alonso, M.P.2    Coira, A.3    Varela, J.4
  • 27
    • 33750341148 scopus 로고    scopus 로고
    • Comparative genomics of the lactic acid bacteria
    • Makarova K. Comparative genomics of the lactic acid bacteria. Proc Natl Acad Sci U S A 2006, 103:15611-15616.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 15611-15616
    • Makarova, K.1
  • 29
    • 0020382854 scopus 로고
    • Nucleic acid hybridization of group N and group D streptococci
    • Kilpper-Bälz R, Fischer G, Schleifer KH. Nucleic acid hybridization of group N and group D streptococci. Curr Microbiol 1982, 7:245-250.
    • (1982) Curr Microbiol , vol.7 , pp. 245-250
    • Kilpper-Bälz, R.1    Fischer, G.2    Schleifer, K.H.3
  • 31
    • 84861215353 scopus 로고    scopus 로고
    • Complete genome sequence of the African dairy isolate Streptococcus infantarius subsp. infantarius strain CJ18
    • Jans C, Follador R, Lacroix C, Meile L, Stevens MJA. Complete genome sequence of the African dairy isolate Streptococcus infantarius subsp. infantarius strain CJ18. J Bacteriol 2012, 194:2105-2106.
    • (2012) J Bacteriol , vol.194 , pp. 2105-2106
    • Jans, C.1    Follador, R.2    Lacroix, C.3    Meile, L.4    Stevens, M.J.A.5
  • 32
    • 79957514960 scopus 로고    scopus 로고
    • Sequencing and comparative genome analysis of two pathogenic Streptococcus gallolyticus subspecies: genome plasticity, adaptation and virulence
    • Lin IH, Liu T-T, Teng Y-T, Wu H-L, Liu Y-M, Wu K-M, Chang C-H, Hsu M-T. Sequencing and comparative genome analysis of two pathogenic Streptococcus gallolyticus subspecies: genome plasticity, adaptation and virulence. PLoS One 2011, 6:e20519.
    • (2011) PLoS One , vol.6
    • Lin, I.H.1    Liu, T.-T.2    Teng, Y.-T.3    Wu, H.-L.4    Liu, Y.-M.5    Wu, K.-M.6    Chang, C.-H.7    Hsu, M.-T.8
  • 33
    • 79961123954 scopus 로고    scopus 로고
    • Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis
    • Hinse D, Vollmer T, Rückert C, Blom J, Kalinowski J, Knabbe C, Dreier J. Complete genome and comparative analysis of Streptococcus gallolyticus subsp gallolyticus, an emerging pathogen of infective endocarditis. BMC Genomics 2011, 12:400.
    • (2011) BMC Genomics , vol.12 , pp. 400
    • Hinse, D.1    Vollmer, T.2    Rückert, C.3    Blom, J.4    Kalinowski, J.5    Knabbe, C.6    Dreier, J.7
  • 34
    • 0037125989 scopus 로고    scopus 로고
    • Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae
    • Tettelin H. Complete genome sequence and comparative genomic analysis of an emerging human pathogen, serotype V Streptococcus agalactiae. Proc Natl Acad Sci U S A 2002, 99:12391-12396.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 12391-12396
    • Tettelin, H.1
  • 37
    • 79955583963 scopus 로고    scopus 로고
    • Screening for antimicrobial resistance genes and virulence factors via genome sequencing
    • Bennedsen M, Stuer-Lauridsen B, Danielsen M, Johansen E. Screening for antimicrobial resistance genes and virulence factors via genome sequencing. Appl Environ Microbiol 2011, 77:2785-2787.
    • (2011) Appl Environ Microbiol , vol.77 , pp. 2785-2787
    • Bennedsen, M.1    Stuer-Lauridsen, B.2    Danielsen, M.3    Johansen, E.4
  • 40
    • 78651084774 scopus 로고    scopus 로고
    • Complete genome sequencing and analysis of a Lancefield group G Streptococcus dysgalactiae subsp. equisimilis strain causing streptococcal toxic shock syndrome (STSS)
    • Shimomura Y, Okumura K, Murayama SY, Yagi J, Ubukata K, Kirikae T, Miyoshi-Akiyama T. Complete genome sequencing and analysis of a Lancefield group G Streptococcus dysgalactiae subsp. equisimilis strain causing streptococcal toxic shock syndrome (STSS). BMC Genomics 2011, 12:17.
    • (2011) BMC Genomics , vol.12 , pp. 17
    • Shimomura, Y.1    Okumura, K.2    Murayama, S.Y.3    Yagi, J.4    Ubukata, K.5    Kirikae, T.6    Miyoshi-Akiyama, T.7
  • 41
    • 67650658074 scopus 로고    scopus 로고
    • Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis
    • Holden MTG. Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis. PLoS One 2009, 4:e6072.
    • (2009) PLoS One , vol.4
    • Holden, M.T.G.1
  • 42
    • 51849112875 scopus 로고    scopus 로고
    • Genome sequence of a Lancefield group C Streptococcus zooepidemicus strain causing epidemic nephritis: new information about an old disease
    • Beres SB, Sesso R, Pinto SWL, Hoe NP, Porcella SF, DeLeo FR, Musser JM. Genome sequence of a Lancefield group C Streptococcus zooepidemicus strain causing epidemic nephritis: new information about an old disease. PLoS One 2008, 3:e3026.
    • (2008) PLoS One , vol.3
    • Beres, S.B.1    Sesso, R.2    Pinto, S.W.L.3    Hoe, N.P.4    Porcella, S.F.5    DeLeo, F.R.6    Musser, J.M.7
  • 46
    • 0034806849 scopus 로고    scopus 로고
    • Genome of the bacterium Streptococcus pneumoniae strain R6
    • Hoskins J. Genome of the bacterium Streptococcus pneumoniae strain R6. J Bacteriol 2001, 183:5709-5717.
    • (2001) J Bacteriol , vol.183 , pp. 5709-5717
    • Hoskins, J.1
  • 47
    • 0035919670 scopus 로고    scopus 로고
    • Complete genome sequence of a virulent isolate of Streptococcus pneumoniae
    • Tettelin H. Complete genome sequence of a virulent isolate of Streptococcus pneumoniae. Science 2001, 293:498-506.
    • (2001) Science , vol.293 , pp. 498-506
    • Tettelin, H.1
  • 48
    • 0036174588 scopus 로고    scopus 로고
    • Galactose and lactose genes from the galactose-positive bacterium Streptococcus salivarius and the phylogenetically related galactose-negative bacterium Streptococcus thermophilus: organization, sequence, transcription, and activity of the gal gene products
    • Vaillancourt K, Moineau S, Frenette M, Lessard C, Vadeboncoeur C. Galactose and lactose genes from the galactose-positive bacterium Streptococcus salivarius and the phylogenetically related galactose-negative bacterium Streptococcus thermophilus: organization, sequence, transcription, and activity of the gal gene products. J Bacteriol 2002, 184:785-793.
    • (2002) J Bacteriol , vol.184 , pp. 785-793
    • Vaillancourt, K.1    Moineau, S.2    Frenette, M.3    Lessard, C.4    Vadeboncoeur, C.5
  • 51
    • 0031943760 scopus 로고    scopus 로고
    • Construction of a food-grade multiple-copy integration system for Lactococcus lactis
    • Leenhouts K, Bolhuis A, Venema G, Kok J. Construction of a food-grade multiple-copy integration system for Lactococcus lactis. Appl Microbiol Biotechnol 1998, 49:417-423.
    • (1998) Appl Microbiol Biotechnol , vol.49 , pp. 417-423
    • Leenhouts, K.1    Bolhuis, A.2    Venema, G.3    Kok, J.4
  • 52
    • 0003065247 scopus 로고
    • Lactococcal plasmid vectors
    • Oxford, UK: IRL Press, Inc, Hardy KG, 2
    • Leenhouts K, Venema G. Lactococcal plasmid vectors. Plasmids: a practical approach 1993, 65-94. Oxford, UK: IRL Press, Inc, Hardy KG, 2.
    • (1993) Plasmids: a practical approach , pp. 65-94
    • Leenhouts, K.1    Venema, G.2
  • 53
    • 0026801262 scopus 로고
    • New thermosensitive plasmid for Gram-positive bacteria
    • Maguin E, Duwat P, Hege T, Ehrlich D, Gruss A. New thermosensitive plasmid for Gram-positive bacteria. J Bacteriol 1992, 174:5633-5638.
    • (1992) J Bacteriol , vol.174 , pp. 5633-5638
    • Maguin, E.1    Duwat, P.2    Hege, T.3    Ehrlich, D.4    Gruss, A.5
  • 54
    • 0242351930 scopus 로고    scopus 로고
    • Bacterial oligopeptide-binding proteins
    • Monnet V. Bacterial oligopeptide-binding proteins. Cell Mol Life Sci 2003, 60:2100-2114.
    • (2003) Cell Mol Life Sci , vol.60 , pp. 2100-2114
    • Monnet, V.1
  • 55
    • 0037016736 scopus 로고    scopus 로고
    • Three oligopeptide-binding proteins are involved in the oligopeptide transport of Streptococcus thermophilus
    • Garault P, Le Bars D, Besset C, Monnet V. Three oligopeptide-binding proteins are involved in the oligopeptide transport of Streptococcus thermophilus. J Biol Chem 2002, 277:32-39.
    • (2002) J Biol Chem , vol.277 , pp. 32-39
    • Garault, P.1    Le Bars, D.2    Besset, C.3    Monnet, V.4
  • 56
    • 0033040620 scopus 로고    scopus 로고
    • Identification and characterization of the cps locus of Streptococcus suis serotype 2: the capsule protects against phagocytosis and is an important virulence factor
    • Smith HE, Damman M, van der Velde J, Wagenaar F, Wisselink HJ, Stockhofe-Zurwieden N, Smits MA. Identification and characterization of the cps locus of Streptococcus suis serotype 2: the capsule protects against phagocytosis and is an important virulence factor. Infect Immun 1999, 67:1750-1756.
    • (1999) Infect Immun , vol.67 , pp. 1750-1756
    • Smith, H.E.1    Damman, M.2    van der Velde, J.3    Wagenaar, F.4    Wisselink, H.J.5    Stockhofe-Zurwieden, N.6    Smits, M.A.7
  • 57
    • 0022993292 scopus 로고
    • Role of Streptococcus mutans in human dental decay
    • Loesche WJ. Role of Streptococcus mutans in human dental decay. Microbiol Rev 1986, 50:353-380.
    • (1986) Microbiol Rev , vol.50 , pp. 353-380
    • Loesche, W.J.1
  • 58
    • 55449128929 scopus 로고    scopus 로고
    • Stealth proteins: in silico identification of a novel protein family rendering bacterial pathogens invisible to host immune defense
    • Sperisen P, Schmid CD, Bucher P, Zilian O. Stealth proteins: in silico identification of a novel protein family rendering bacterial pathogens invisible to host immune defense. PLoS Comp Biol 2005, 1:492-499.
    • (2005) PLoS Comp Biol , vol.1 , pp. 492-499
    • Sperisen, P.1    Schmid, C.D.2    Bucher, P.3    Zilian, O.4
  • 59
    • 84877594227 scopus 로고    scopus 로고
    • Medically important beta-hemolytic streptococci
    • New York, NY, USA: Springer Verlag, Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E
    • Cleary P, Cheng Q. Medically important beta-hemolytic streptococci. The Prokaryotes, an evolving electronic resource for the microbiological community 2006, 108-148. New York, NY, USA: Springer Verlag, Dworkin M, Falkow S, Rosenberg E, Schleifer K-H, Stackebrandt E.
    • (2006) The Prokaryotes, an evolving electronic resource for the microbiological community , pp. 108-148
    • Cleary, P.1    Cheng, Q.2
  • 60
    • 38549107537 scopus 로고    scopus 로고
    • VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics
    • Yang J, Chen LH, Sun LL, Yu J, Jin Q. VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics. Nucleic Acids Res 2008, 36:D539-D542.
    • (2008) Nucleic Acids Res , vol.36
    • Yang, J.1    Chen, L.H.2    Sun, L.L.3    Yu, J.4    Jin, Q.5
  • 62
    • 64349108725 scopus 로고    scopus 로고
    • The genetic transformation machinery: composition, localization, and mechanism
    • Claverys JP, Martin B, Polard P. The genetic transformation machinery: composition, localization, and mechanism. FEMS Microbiol Rev 2009, 33:643-656.
    • (2009) FEMS Microbiol Rev , vol.33 , pp. 643-656
    • Claverys, J.P.1    Martin, B.2    Polard, P.3
  • 63
    • 77958555440 scopus 로고    scopus 로고
    • A novel double-tryptophan peptide pheromone controls competence in Streptococcus spp. via an Rgg regulator
    • Mashburn-Warren L, Morrison DA, Federle MJ. A novel double-tryptophan peptide pheromone controls competence in Streptococcus spp. via an Rgg regulator. Mol Microbiol 2010, 78:589-606.
    • (2010) Mol Microbiol , vol.78 , pp. 589-606
    • Mashburn-Warren, L.1    Morrison, D.A.2    Federle, M.J.3
  • 64
    • 79955435335 scopus 로고    scopus 로고
    • Clustered regularly interspaced short palindromic repeats (CRISPRs): the hallmark of an ingenious antiviral defense mechanism in prokaryotes
    • Al-Attar S, Westra ER, van der Oost J, Brouns SJJ. Clustered regularly interspaced short palindromic repeats (CRISPRs): the hallmark of an ingenious antiviral defense mechanism in prokaryotes. Biol Chem 2011, 392:277-289.
    • (2011) Biol Chem , vol.392 , pp. 277-289
    • Al-Attar, S.1    Westra, E.R.2    van der Oost, J.3    Brouns, S.J.J.4
  • 66
    • 33846913393 scopus 로고    scopus 로고
    • Bacteriocin diversity in Streptococcus and Enterococcus
    • Nes IF, Diep DB, Holo H. Bacteriocin diversity in Streptococcus and Enterococcus. J Bacteriol 2007, 189:1189-1198.
    • (2007) J Bacteriol , vol.189 , pp. 1189-1198
    • Nes, I.F.1    Diep, D.B.2    Holo, H.3
  • 67
    • 0031256337 scopus 로고    scopus 로고
    • Use of starter cultures in fermentation on a household scale
    • Holzapfel W. Use of starter cultures in fermentation on a household scale. Food Control 1997, 8:241-258.
    • (1997) Food Control , vol.8 , pp. 241-258
    • Holzapfel, W.1
  • 68
    • 0027409010 scopus 로고
    • Contaminated weaning food: a major risk factor for diarrhea and associated malnutrition
    • Motarjemi Y, Käferstein F, Moy G, Quevedo F. Contaminated weaning food: a major risk factor for diarrhea and associated malnutrition. Bull WHO 1993, 71:79-92.
    • (1993) Bull WHO , vol.71 , pp. 79-92
    • Motarjemi, Y.1    Käferstein, F.2    Moy, G.3    Quevedo, F.4
  • 69
    • 0031256751 scopus 로고    scopus 로고
    • Lactic fermented foods in Africa and their benefits
    • Oyewole OB. Lactic fermented foods in Africa and their benefits. Food Control 1997, 8:289-297.
    • (1997) Food Control , vol.8 , pp. 289-297
    • Oyewole, O.B.1
  • 72
    • 0003666478 scopus 로고
    • Cambridge, MA, USA: Harvard University Press
    • Bulliet RW. The camel and the wheel 1975, Cambridge, MA, USA: Harvard University Press.
    • (1975) The camel and the wheel
    • Bulliet, R.W.1
  • 73
    • 0342807764 scopus 로고
    • Notes on the dispersal of the dromedary
    • Mikesell MW. Notes on the dispersal of the dromedary. Southwest J Anthrop 1955, 11:231-245.
    • (1955) Southwest J Anthrop , vol.11 , pp. 231-245
    • Mikesell, M.W.1
  • 74
    • 76449099470 scopus 로고    scopus 로고
    • CRISPR analysis of bacteriophage-insensitive mutants (BIMs) of industrial Streptococcus thermophilus- implications for starter design
    • Mills S, Griffin C, Coffey A, Meijer WC, Hafkamp B, Ross RP. CRISPR analysis of bacteriophage-insensitive mutants (BIMs) of industrial Streptococcus thermophilus- implications for starter design. J Appl Microbiol 2010, 108:945-955.
    • (2010) J Appl Microbiol , vol.108 , pp. 945-955
    • Mills, S.1    Griffin, C.2    Coffey, A.3    Meijer, W.C.4    Hafkamp, B.5    Ross, R.P.6
  • 76
    • 33846904216 scopus 로고    scopus 로고
    • Extent of horizontal gene transfer in evolution of streptococci of the salivarius group
    • Delorme C, Poyart C, Ehrlich SD, Renault P. Extent of horizontal gene transfer in evolution of streptococci of the salivarius group. J Bacteriol 2007, 189:1330-1341.
    • (2007) J Bacteriol , vol.189 , pp. 1330-1341
    • Delorme, C.1    Poyart, C.2    Ehrlich, S.D.3    Renault, P.4
  • 78
    • 0016686551 scopus 로고
    • Improved medium for lactic streptococci and their bacteriophages
    • Terzaghi BE, Sandine WE. Improved medium for lactic streptococci and their bacteriophages. Appl Microbiol 1975, 29:807-813.
    • (1975) Appl Microbiol , vol.29 , pp. 807-813
    • Terzaghi, B.E.1    Sandine, W.E.2
  • 79
    • 85010247051 scopus 로고
    • An agar culture medium for lactic acid streptococci and lactobacilli
    • Elliker PR, Anderson AW, Hannesson G. An agar culture medium for lactic acid streptococci and lactobacilli. J Dairy Sci 1956, 39:1611-1612.
    • (1956) J Dairy Sci , vol.39 , pp. 1611-1612
    • Elliker, P.R.1    Anderson, A.W.2    Hannesson, G.3
  • 80
    • 0015724466 scopus 로고
    • Carbohydrate metabolism in lactic streptococci: fate of galactose supplied in free or disaccharide form
    • Lee R, Molsknes T, Sandine WE, Elliker PR. Carbohydrate metabolism in lactic streptococci: fate of galactose supplied in free or disaccharide form. Appl Microbiol 1973, 26:951-958.
    • (1973) Appl Microbiol , vol.26 , pp. 951-958
    • Lee, R.1    Molsknes, T.2    Sandine, W.E.3    Elliker, P.R.4
  • 83
    • 0018800089 scopus 로고
    • Rapid alkaline extraction procedure for screening recombinant plasmid DNA
    • Birnboim HC, Doly J. Rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 1979, 7:1513-1523.
    • (1979) Nucleic Acids Res , vol.7 , pp. 1513-1523
    • Birnboim, H.C.1    Doly, J.2
  • 85
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith TF, Waterman MS. Identification of common molecular subsequences. J Mol Biol 1981, 147:195-197.
    • (1981) J Mol Biol , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 86
    • 41349112730 scopus 로고    scopus 로고
    • Ori-Finder: a web-based system for finding oriCs in unannotated bacterial genomes
    • Gao F, Zhang CT. Ori-Finder: a web-based system for finding oriCs in unannotated bacterial genomes. BMC Bioinformatics 2008, 9:79.
    • (2008) BMC Bioinformatics , vol.9 , pp. 79
    • Gao, F.1    Zhang, C.T.2
  • 87
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 2007, 24:1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 88
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 89
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4:406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 90
    • 3342920601 scopus 로고    scopus 로고
    • Prospects for inferring very large phylogenies by using the neighbor-joining method
    • Tamura K, Nei M, Kumar S. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc Natl Acad Sci U S A 2004, 101:11030-11035.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 11030-11035
    • Tamura, K.1    Nei, M.2    Kumar, S.3
  • 91
    • 0026458378 scopus 로고
    • Amino acid substitution matrices from protein blocks
    • Henikoff S, Henikoff JG. Amino acid substitution matrices from protein blocks. Proc Natl Acad Sci U S A 1992, 89:10915-10919.
    • (1992) Proc Natl Acad Sci U S A , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 92
    • 13244252316 scopus 로고    scopus 로고
    • Visualization of comparative genomic analyses by BLAST score ratio
    • Rasko DA, Myers GSA, Ravel J. Visualization of comparative genomic analyses by BLAST score ratio. BMC Bioinformatics 2005, 6:2.
    • (2005) BMC Bioinformatics , vol.6 , pp. 2
    • Rasko, D.A.1    Myers, G.S.A.2    Ravel, J.3
  • 93
    • 23144442407 scopus 로고    scopus 로고
    • Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies
    • van Hijum S, Zomer AL, Kuipers OP, Kok J. Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies. Nucleic Acids Res 2005, 33:W560-W566.
    • (2005) Nucleic Acids Res , vol.33
    • van Hijum, S.1    Zomer, A.L.2    Kuipers, O.P.3    Kok, J.4
  • 97
    • 34547579396 scopus 로고    scopus 로고
    • CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
    • Grissa I, Vergnaud G, Pourcel C. CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats. Nucleic Acids Res 2007, 35:W52-W57.
    • (2007) Nucleic Acids Res , vol.35
    • Grissa, I.1    Vergnaud, G.2    Pourcel, C.3
  • 98
    • 34250662138 scopus 로고    scopus 로고
    • The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
    • Grissa I, Vergnaud G, Pourcel C. The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats. BMC Bioinformatics 2007, 8:172.
    • (2007) BMC Bioinformatics , vol.8 , pp. 172
    • Grissa, I.1    Vergnaud, G.2    Pourcel, C.3
  • 99
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 1999, 41:95-98.
    • (1999) Nucl Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.