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Volumn 4, Issue 12, 2012, Pages 1213-1222

Estimating the rate of irreversibility in protein evolution

Author keywords

Ancestral state reconstruction; Epistasis; Genetic diseases; Irreversibility; Protein evolution

Indexed keywords

MAMMALIA;

EID: 84874768052     PISSN: None     EISSN: 17596653     Source Type: Journal    
DOI: 10.1093/gbe/evs096     Document Type: Article
Times cited : (30)

References (79)
  • 1
    • 27144491328 scopus 로고    scopus 로고
    • Adaptive evolution of non-coding DNA in Drosophila
    • Andolfatto P. 2005. Adaptive evolution of non-coding DNA in Drosophila. Nature 437(7062):1149-1153.
    • (2005) Nature , vol.437 , Issue.7062 , pp. 1149-1153
    • Andolfatto, P.1
  • 2
    • 2942529014 scopus 로고    scopus 로고
    • Mitogenomic analyses provide new insights into cetacean origin and evolution
    • Arnason U, Gullberg A, Janke A. 2004. Mitogenomic analyses provide new insights into cetacean origin and evolution. Gene 333:27-34.
    • (2004) Gene , vol.333 , pp. 27-34
    • Arnason, U.1    Gullberg, A.2    Janke, A.3
  • 4
    • 77953131796 scopus 로고    scopus 로고
    • Fourteen nuclear genes provide phylogenetic resolution for difficult nodes in the turtle tree of life
    • Barley AJ, Spinks PQ, Thomson RC, Shaffer HB. 2010. Fourteen nuclear genes provide phylogenetic resolution for difficult nodes in the turtle tree of life. Mol Phylogenet Evol. 55:1189-1194.
    • (2010) Mol Phylogenet Evol. , vol.55 , pp. 1189-1194
    • Barley, A.J.1    Spinks, P.Q.2    Thomson, R.C.3    Shaffer, H.B.4
  • 6
    • 44949129000 scopus 로고    scopus 로고
    • Assessing the evolutionary impact of amino acid mutations in the human genome
    • Boyko AR, et al. 2008. Assessing the evolutionary impact of amino acid mutations in the human genome. PLoS Genet. 4:1-13.
    • (2008) PLoS Genet. , vol.4 , pp. 1-13
    • Boyko, A.R.1
  • 7
    • 70349464621 scopus 로고    scopus 로고
    • An epistatic ratchet constrains the direction of glucocorticoid receptor evolution
    • Bridgham JT, Ortlund EA, Thornton JW. 2009. An epistatic ratchet constrains the direction of glucocorticoid receptor evolution. Nature 461: 515-519.
    • (2009) Nature , vol.461 , pp. 515-519
    • Bridgham, J.T.1    Ortlund, E.A.2    Thornton, J.W.3
  • 8
    • 0001426873 scopus 로고
    • On irreversible evolution
    • Bull JJ, Charnov EL. 1985. On irreversible evolution. Evolution 39: 1149-1155.
    • (1985) Evolution , vol.39 , pp. 1149-1155
    • Bull, J.J.1    Charnov, E.L.2
  • 9
    • 83055180178 scopus 로고    scopus 로고
    • Predicting mutation outcome from early stochastic variation in genetic interaction partners
    • Burga A, Casanueva MO, Lehner B. 2011. Predicting mutation outcome from early stochastic variation in genetic interaction partners. Nature 480:250-253.
    • (2011) Nature , vol.480 , pp. 250-253
    • Burga, A.1    Casanueva, M.O.2    Lehner, B.3
  • 10
    • 72149127147 scopus 로고    scopus 로고
    • Estimating the phylogeny and divergence times of primates using a supermatrix approach
    • Chatterjee HJ, Ho SY, Barnes I, Groves C. 2009. Estimating the phylogeny and divergence times of primates using a supermatrix approach. BMC Evol Biol. 9:259.
    • (2009) BMC Evol Biol. , vol.9 , pp. 259
    • Chatterjee, H.J.1    Ho, S.Y.2    Barnes, I.3    Groves, C.4
  • 11
    • 67650085264 scopus 로고    scopus 로고
    • Comprehensive phylogeny of the family Sparidae (Perciformes: Teleostei) inferred from mitochondrial gene analyses
    • Chiba SN, Iwatski Y, Yoshino T, Hanzawa N. 2009. Comprehensive phylogeny of the family Sparidae (Perciformes: Teleostei) inferred from mitochondrial gene analyses. Genes Genet Syst. 84:153-170
    • (2009) Genes Genet Syst. , vol.84 , pp. 153-170
    • Chiba, S.N.1    Iwatski, Y.2    Yoshino, T.3    Hanzawa, N.4
  • 12
    • 11844257707 scopus 로고    scopus 로고
    • Phylogenetic evidence for a major reversal of life-history evolution in plethodontid salamanders
    • Chippindale PT, Bonett RM, Baldwin AS, Wiens JJ. 2004. Phylogenetic evidence for a major reversal of life-history evolution in plethodontid salamanders. Evolution 58:2809-2822.
    • (2004) Evolution , vol.58 , pp. 2809-2822
    • Chippindale, P.T.1    Bonett, R.M.2    Baldwin, A.S.3    Wiens, J.J.4
  • 13
    • 28444463255 scopus 로고    scopus 로고
    • Robust signals of coevolution of interacting residues in mammalian proteomes identified by phylogeny-aided structural analysis
    • Choi SS, Li W, Lahn BT. 2005. Robust signals of coevolution of interacting residues in mammalian proteomes identified by phylogeny-aided structural analysis. Nat Genet. 37:1367-1371.
    • (2005) Nat Genet. , vol.37 , pp. 1367-1371
    • Choi, S.S.1    Li, W.2    Lahn, B.T.3
  • 14
    • 53849099602 scopus 로고    scopus 로고
    • Reversing opinions on Dollo's law
    • Collin R, Miglietta MP. 2008. Reversing opinions on Dollo's law. Trends Ecol Evol. 23:602-609.
    • (2008) Trends Ecol Evol. , vol.23 , pp. 602-609
    • Collin, R.1    Miglietta, M.P.2
  • 15
    • 34547769282 scopus 로고    scopus 로고
    • Mutational reversions during adaptive protein evolution
    • DePristo MA, Hartl DL,Weinreich DM. 2007. Mutational reversions during adaptive protein evolution. Mol Biol Evol. 24:1608-1610.
    • (2007) Mol Biol Evol. , vol.24 , pp. 1608-1610
    • Depristo, M.A.1    Hartl, D.L.2    Weinreich, D.M.3
  • 16
    • 23944490117 scopus 로고    scopus 로고
    • Missense meanderings in sequence space: A biophysical view of protein evolution
    • DePristo MA, Weinreich DM, Hartl DL. 2005. Missense meanderings in sequence space: a biophysical view of protein evolution. Nat Rev Genet. 6:678-687.
    • (2005) Nat Rev Genet. , vol.6 , pp. 678-687
    • Depristo, M.A.1    Weinreich, D.M.2    Hartl, D.L.3
  • 17
    • 0001232092 scopus 로고
    • Studies on hybrid sterility. II. Localization of sterility factors in Drosophila pseudoobscura hybrids
    • Dobzhansky T. 1936. Studies on hybrid sterility. II. Localization of sterility factors in Drosophila pseudoobscura hybrids. Genetics 21:113-135.
    • (1936) Genetics , vol.21 , pp. 113-135
    • Dobzhansky, T.1
  • 19
    • 0036038208 scopus 로고    scopus 로고
    • Phylogeny of Tetraoninae and other galliformbirds usingmitochondrial 12S and ND2 genes
    • Dimcheff DE, Drovetski SV, Mindell DP. 2002. Phylogeny of Tetraoninae and other galliformbirds usingmitochondrial 12S and ND2 genes. Mol Phylogenet Evol. 24:203-215.
    • (2002) Mol Phylogenet Evol. , vol.24 , pp. 203-215
    • Dimcheff, D.E.1    Drovetski, S.V.2    Mindell, D.P.3
  • 21
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: Multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 22
    • 54349086402 scopus 로고    scopus 로고
    • Development of a method for the genetic identification of flatfish species on the basis of mitochondrial DNA sequences
    • Espiñeira M, González-Lavín N, Vieites JM, Santaclara FJ. 2008. Development of a method for the genetic identification of flatfish species on the basis of mitochondrial DNA sequences. J Agric Food Chem. 56:8954-8961.
    • (2008) J Agric Food Chem. , vol.56 , pp. 8954-8961
    • Espiñeira, M.1    González-Lavín, N.2    Vieites, J.M.3    Santaclara, F.J.4
  • 23
    • 33748473348 scopus 로고    scopus 로고
    • The genomic rate of adaptive evolution
    • Eyre-Walker A. 2006. The genomic rate of adaptive evolution. Trends Ecol Evol. 21:569-575.
    • (2006) Trends Ecol Evol. , vol.21 , pp. 569-575
    • Eyre-Walker, A.1
  • 24
    • 68949202924 scopus 로고    scopus 로고
    • Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change
    • Eyre-Walker A, Keightley PD. 2009. Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change. Mol Biol Evol. 26:2097-2108.
    • (2009) Mol Biol Evol. , vol.26 , pp. 2097-2108
    • Eyre-Walker, A.1    Keightley, P.D.2
  • 25
    • 74949137624 scopus 로고    scopus 로고
    • Patterns of macroevolution among Primates inferred from a supermatrix of mitochondrial and nuclear DNA
    • Fabre PH, Rodrigues A, Douzery EJ. 2009. Patterns of macroevolution among Primates inferred from a supermatrix of mitochondrial and nuclear DNA. Mol Phylogenet Evol. 53:808-825.
    • (2009) Mol Phylogenet Evol. , vol.53 , pp. 808-825
    • Fabre, P.H.1    Rodrigues, A.2    Douzery, E.J.3
  • 26
    • 33751541671 scopus 로고    scopus 로고
    • Characterization of compensated mutations in terms of structural and physico-chemical properties
    • Ferrer-Costa C, Orozco M, de la Cruz X. 2007. Characterization of compensated mutations in terms of structural and physico-chemical properties. J Mol Biol. 365:249-256.
    • (2007) J Mol Biol. , vol.365 , pp. 249-256
    • Ferrer-Costa, C.1    Orozco, M.2    De La Cruz, X.3
  • 27
    • 0345293158 scopus 로고    scopus 로고
    • Why are some human disease-associated mutations fixed in mice?
    • Gao L, Zhang J. 2003. Why are some human disease-associated mutations fixed in mice? Trends Genet. 19:678-681.
    • (2003) Trends Genet. , vol.19 , pp. 678-681
    • Gao, L.1    Zhang, J.2
  • 28
    • 70350324667 scopus 로고    scopus 로고
    • Genus-level supertree of Cyprinidae (Actinopterygii: Cypriniformes), partitioned qualitative clade support and test of macro-evolutionary scenarios
    • Gaubert P, Denys G, Oberdorff T. 2009. Genus-level supertree of Cyprinidae (Actinopterygii: Cypriniformes), partitioned qualitative clade support and test of macro-evolutionary scenarios. Biol Rev Camb Philos Soc. 84:653-689.
    • (2009) Biol Rev Camb Philos Soc. , vol.84 , pp. 653-689
    • Gaubert, P.1    Denys, G.2    Oberdorff, T.3
  • 29
    • 34247248182 scopus 로고    scopus 로고
    • Adaptive evolution in humans revealed by the negative correlation between the polymorphism and fixation phases of evolution
    • Gojobori J, Tang H, Akey JM,Wu CI. 2007. Adaptive evolution in humans revealed by the negative correlation between the polymorphism and fixation phases of evolution. Proc Natl Acad Sci U S A. 104: 3907-3912.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 3907-3912
    • Gojobori, J.1    Tang, H.2    Akey Jmwu, C.I.3
  • 31
    • 19144369122 scopus 로고    scopus 로고
    • A complete estimate of the phylogenetic relationships in Ruminantia: A dated species-level supertree of the extant ruminants
    • Hernández Fernández M, Vrba ES. 2005. A complete estimate of the phylogenetic relationships in Ruminantia: a dated species-level supertree of the extant ruminants. Biol Rev Camb Philos Soc. 80: 269-302.
    • (2005) Biol Rev Camb Philos Soc. , vol.80 , pp. 269-302
    • Hernández Fernández, M.1    Vrba, E.S.2
  • 32
    • 38649115646 scopus 로고    scopus 로고
    • Phylogeny and divergence of the pinnipeds (Carnivora: Mammalia) assessed using a multigene dataset
    • Higdon JW, Bininda-Emonds OR, Beck RM, Ferguson SH. 2007. Phylogeny and divergence of the pinnipeds (Carnivora: Mammalia) assessed using a multigene dataset. BMC Evol Biol. 7:216.
    • (2007) BMC Evol Biol. , vol.7 , pp. 216
    • Higdon, J.W.1    Bininda-Emonds, O.R.2    Beck, R.M.3    Ferguson, S.H.4
  • 33
    • 77958144056 scopus 로고    scopus 로고
    • Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): A mitogenomic perspective
    • Inoue JG, et al. 2010. Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): a mitogenomic perspective. Mol Biol Evol. 27:2576-2586.
    • (2010) Mol Biol Evol. , vol.27 , pp. 2576-2586
    • Inoue, J.G.1
  • 34
    • 27644556395 scopus 로고    scopus 로고
    • Bats, clocks, and rocks: Diversification patterns in Chiroptera
    • Jones KE, Bininda-Emonds OR, Gittleman JL. 2005. Bats, clocks, and rocks: diversification patterns in Chiroptera. Evolution 59:2243-2255.
    • (2005) Evolution , vol.59 , pp. 2243-2255
    • Jones, K.E.1    Bininda-Emonds, O.R.2    Gittleman, J.L.3
  • 36
    • 52449148668 scopus 로고
    • The role of compensatory neutral mutations in molecular evolution
    • Kimura M. 1985. The role of compensatory neutral mutations in molecular evolution. J Genet. 64:7-19.
    • (1985) J Genet. , vol.64 , pp. 7-19
    • Kimura, M.1
  • 39
    • 9444269272 scopus 로고    scopus 로고
    • Compensated deleterious mutations in insect genomes
    • Kulathinal RJ, Bettencourt BR, Hartl DL. 2004. Compensated deleterious mutations in insect genomes. Science 306:1553-1554.
    • (2004) Science , vol.306 , pp. 1553-1554
    • Kulathinal, R.J.1    Bettencourt, B.R.2    Hartl, D.L.3
  • 40
    • 77954424732 scopus 로고    scopus 로고
    • Evolutionary affinity of billfishes (Xiphiidae and Istiophoridae) and flatfishes (Plueronectiformes): Independent and trans-subordinal origins of endothermy in teleost fishes
    • Little AG, Lougheed SC,Moyes CD. 2010. Evolutionary affinity of billfishes (Xiphiidae and Istiophoridae) and flatfishes (Plueronectiformes): independent and trans-subordinal origins of endothermy in teleost fishes. Mol Phylogenet Evol. 56:897-904.
    • (2010) Mol Phylogenet Evol. , vol.56 , pp. 897-904
    • Little, A.G.1    Lougheed, S.C.2    Moyes, C.D.3
  • 41
    • 33846151652 scopus 로고    scopus 로고
    • Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion
    • Livezey BC, Zusi RL. 2007. Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion. Zool J Linn Soc. 149:1-95.
    • (2007) Zool J Linn Soc. , vol.149 , pp. 1-95
    • Livezey, B.C.1    Zusi, R.L.2
  • 42
    • 78449233935 scopus 로고    scopus 로고
    • Pervasive cryptic epistasis in molecular evolution
    • Lunzer M, Golding GB, Dean AM. 2010. Pervasive cryptic epistasis in molecular evolution. PLoS Genet. 6:e1001162.
    • (2010) PLoS Genet. , vol.6
    • Lunzer, M.1    Golding, G.B.2    Dean, A.M.3
  • 43
    • 33847030645 scopus 로고    scopus 로고
    • Independent evolution of the specialized pharyngeal jaw apparatus in cichlid and labrid fishes
    • Mabuchi K, Miya M, Azuma Y, Nishida M. 2007. Independent evolution of the specialized pharyngeal jaw apparatus in cichlid and labrid fishes. BMC Evol Biol. 7:10.
    • (2007) BMC Evol Biol. , vol.7 , pp. 10
    • Mabuchi, K.1    Miya, M.2    Azuma, Y.3    Nishida, M.4
  • 44
    • 0014935646 scopus 로고
    • Natural selection and the concept of a protein space
    • Maynard Smith J. 1970. Natural selection and the concept of a protein space. Nature 225:563-564.
    • (1970) Nature , vol.225 , pp. 563-564
    • Maynard Smith, J.1
  • 45
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald JH, Kreitman M. 1991. Adaptive protein evolution at the Adh locus in Drosophila. Nature 351:652-654.
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 46
    • 77956231083 scopus 로고    scopus 로고
    • Molecular phylogenetic analyses of genus Crocodylus (Eusuchia, Crocodylia, Crocodylidae) and the taxonomic position of Crocodylus porosus
    • Meganathan PR, Dubey B, Batzer MA, Ray DA, Haque I. 2010. Molecular phylogenetic analyses of genus Crocodylus (Eusuchia, Crocodylia, Crocodylidae) and the taxonomic position of Crocodylus porosus. Mol Phylogenet Evol. 57:393-402.
    • (2010) Mol Phylogenet Evol. , vol.57 , pp. 393-402
    • Meganathan, P.R.1    Dubey, B.2    Batzer, M.A.3    Ray, D.A.4    Haque, I.5
  • 47
    • 77949423534 scopus 로고    scopus 로고
    • Compensatory evolution in mitochondrial tRNAs navigates valleys of low fitness
    • Meer MV, Kondrashov AS, Artzy-Randrup Y, Kondrashov FA. 2010. Compensatory evolution in mitochondrial tRNAs navigates valleys of low fitness. Nature 464:279-282.
    • (2010) Nature , vol.464 , pp. 279-282
    • Meer, M.V.1    Kondrashov, A.S.2    Artzy-Randrup, Y.3    Kondrashov, F.A.4
  • 48
    • 0028351760 scopus 로고
    • Recurrent origin of a sexually selected trait in Xiphophorus fishes inferred from a molecular phylogeny
    • Meyer A, Morrissey JM, Schartl M. 1994. Recurrent origin of a sexually selected trait in Xiphophorus fishes inferred from a molecular phylogeny. Nature 368:539-542.
    • (1994) Nature , vol.368 , pp. 539-542
    • Meyer, A.1    Morrissey, J.M.2    Schartl, M.3
  • 49
    • 0842344613 scopus 로고    scopus 로고
    • Recent advances in the (molecular) phylogeny of vertebrates
    • Meyer A, Zardoya R. 2003. Recent advances in the (molecular) phylogeny of vertebrates. Annu Rev Ecol Evol Syst. 34:311-338.
    • (2003) Annu Rev Ecol Evol Syst. , vol.34 , pp. 311-338
    • Meyer, A.1    Zardoya, R.2
  • 50
    • 77951952886 scopus 로고    scopus 로고
    • Easy retrieval of single amino-acid polymorphisms and phenotype information using SwissVar
    • Mottaz A, David FP, Veuthey AL, Yip YL. 2010. Easy retrieval of single amino-acid polymorphisms and phenotype information using SwissVar. Bioinformatics 26:851-852.
    • (2010) Bioinformatics , vol.26 , pp. 851-852
    • Mottaz, A.1    David, F.P.2    Veuthey, A.L.3    Yip, Y.L.4
  • 51
    • 84979134212 scopus 로고
    • Reversibility in evolution considered from the standpoint of genetics
    • Muller HJ. 1939. Reversibility in evolution considered from the standpoint of genetics. Biol Rev Camb Philos Soc. 14:261-280.
    • (1939) Biol Rev Camb Philos Soc. , vol.14 , pp. 261-280
    • Muller, H.J.1
  • 52
    • 55049101153 scopus 로고    scopus 로고
    • Evolutionary relationships of marine turtles: A molecular phylogeny based on nuclear and mitochondrial genes
    • Naro-Maciel E, Le M, FitzSimmons NN, Amato G. 2008. Evolutionary relationships of marine turtles: a molecular phylogeny based on nuclear and mitochondrial genes. Mol Phylogenet Evol. 49:659-662.
    • (2008) Mol Phylogenet Evol. , vol.49 , pp. 659-662
    • Naro-Maciel, E.1    Le, M.2    Fitzsimmons, N.N.3    Amato, G.4
  • 53
    • 77955027318 scopus 로고    scopus 로고
    • Tracking marsupial evolution using archaic genomic retroposon insertions
    • Nilsson MA, et al. 2010. Tracking marsupial evolution using archaic genomic retroposon insertions. PLoS Biol. 8:e1000436.
    • (2010) PLoS Biol. , vol.8
    • Nilsson, M.A.1
  • 54
    • 84876527158 scopus 로고    scopus 로고
    • Baltimore (MD): McKusick- Nathans Institute of Genetic Medicine, Johns Hopkins University. (last accessed September 2011)
    • Online Mendelian Inheritance in Man, OMIM. Baltimore (MD): McKusick- Nathans Institute of Genetic Medicine, Johns Hopkins University. Available from: http://omim.org/ (last accessed September 2011).
  • 55
    • 0028942011 scopus 로고
    • The population genetics of speciation: The evolution of hybrid incompatibilities
    • Orr HA. 1995. The population genetics of speciation: the evolution of hybrid incompatibilities. Genetics 139:1805-1813.
    • (1995) Genetics , vol.139 , pp. 1805-1813
    • Orr, H.A.1
  • 56
    • 79961148205 scopus 로고    scopus 로고
    • Tradeoffs and optimality in the evolution of gene regulation
    • Poelwijk FJ, de Vos MG, Tans SJ. 2011. Tradeoffs and optimality in the evolution of gene regulation. Cell 146:462-470.
    • (2011) Cell , vol.146 , pp. 462-470
    • Poelwijk, F.J.1    De Vos, M.G.2    Tans, S.J.3
  • 57
    • 21044438202 scopus 로고    scopus 로고
    • The rate of compensatory mutation in the DNA bacteriophage phiX174
    • Poon A, Chao L. 2005. The rate of compensatory mutation in the DNA bacteriophage phiX174. Genetics 170:989-999.
    • (2005) Genetics , vol.170 , pp. 989-999
    • Poon, A.1    Chao, L.2
  • 58
    • 77953718211 scopus 로고    scopus 로고
    • Sequence space and the ongoing expansion of the protein universe
    • Povolotskaya IS, Kondrashov FA. 2010. Sequence space and the ongoing expansion of the protein universe. Nature 465:922-926.
    • (2010) Nature , vol.465 , pp. 922-926
    • Povolotskaya, I.S.1    Kondrashov, F.A.2
  • 59
    • 23144461098 scopus 로고    scopus 로고
    • A complete phylogeny of the whales, dolphins, and even-toed hoofed mammals (Cetartiodactyla)
    • Price SA, Bininda-Emonds OR, Gittleman JL. 2005. A complete phylogeny of the whales, dolphins, and even-toed hoofed mammals (Cetartiodactyla). Biol Rev Camb Philos Soc. 80:445-473.
    • (2005) Biol Rev Camb Philos Soc. , vol.80 , pp. 445-473
    • Price, S.A.1    Bininda-Emonds, O.R.2    Gittleman, J.L.3
  • 60
    • 33846250309 scopus 로고    scopus 로고
    • Molecular and karyological aspects of Batoidea (Chondrichthyes, Elasmobranchi) phylogeny
    • Rocco L, et al. 2007. Molecular and karyological aspects of Batoidea (Chondrichthyes, Elasmobranchi) phylogeny. Gene 389:80-86.
    • (2007) Gene , vol.389 , pp. 80-86
    • Rocco, L.1
  • 61
    • 0035091156 scopus 로고    scopus 로고
    • Episodic evolution of pyrin in primates: Human mutations recapitulate ancestral amino acid states
    • Schaner P, et al. 2001. Episodic evolution of pyrin in primates: human mutations recapitulate ancestral amino acid states. Nat Genet. 27: 318-321.
    • (2001) Nat Genet. , vol.27 , pp. 318-321
    • Schaner, P.1
  • 62
    • 0035173378 scopus 로고    scopus 로고
    • DbSNP: The NCBI database of genetic variation
    • Sherry ST, et al. 2001. dbSNP: the NCBI database of genetic variation. Nucleic Acids Res. 29:308-311.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 308-311
    • Sherry, S.T.1
  • 63
    • 0037186564 scopus 로고    scopus 로고
    • Adaptive protein evolution in Drosophila
    • Smith NG, Eyre-Walker A. 2002. Adaptive protein evolution in Drosophila. Nature 415:1022-1024.
    • (2002) Nature , vol.415 , pp. 1022-1024
    • Smith, N.G.1    Eyre-Walker, A.2
  • 64
    • 15744380228 scopus 로고    scopus 로고
    • New DNA data from a transthyretin nuclear intron suggest an oligocene to miocene diversification of living South America opossums (Marsupialia: Didelphidae)
    • Steiner C, Tilak MK, Douzery EJ, Catzeflis FM. 2005. New DNA data from a transthyretin nuclear intron suggest an oligocene to miocene diversification of living South America opossums (Marsupialia: Didelphidae). Mol Phylogenet Evol. 35:363-379.
    • (2005) Mol Phylogenet Evol. , vol.35 , pp. 363-379
    • Steiner, C.1    Tilak, M.K.2    Douzery, E.J.3    Catzeflis, F.M.4
  • 65
    • 77953446523 scopus 로고    scopus 로고
    • The Human Gene Mutation Database: 2008 update
    • Stenson PD, et al. 2009. The Human Gene Mutation Database: 2008 update. Genome Med. 1:13.
    • (2009) Genome Med. , vol.1 , pp. 13
    • Stenson, P.D.1
  • 66
    • 79960624826 scopus 로고    scopus 로고
    • Hidden randomness between fitness landscapes limits reverse evolution
    • Tan L, Serene S, Chao HX, Gore J. 2011. Hidden randomness between fitness landscapes limits reverse evolution. Phys Rev Lett. 106: 198102.
    • (2011) Phys Rev Lett. , vol.106 , pp. 198102
    • Tan, L.1    Serene, S.2    Chao, H.X.3    Gore, J.4
  • 67
    • 79251481177 scopus 로고    scopus 로고
    • Polymorphisms in the bovine hemoglobin-beta gene provide evidence for gene-flow between wild species of Bos (Bibos) and domestic cattle in Southeast Asia
    • Tanaka K, et al. 2011. Polymorphisms in the bovine hemoglobin-beta gene provide evidence for gene-flow between wild species of Bos (Bibos) and domestic cattle in Southeast Asia. Anim Sci J. 82:36-45.
    • (2011) Anim Sci J. , vol.82 , pp. 36-45
    • Tanaka, K.1
  • 68
    • 77956230551 scopus 로고    scopus 로고
    • Systematics of the subfamily Danioninae (Teleostei: Cypriniformes: Cyprinidae)
    • Tang KL, et al. 2010. Systematics of the subfamily Danioninae (Teleostei: Cypriniformes: Cyprinidae). Mol Phylogenet Evol. 57:189-214.
    • (2010) Mol Phylogenet Evol. , vol.57 , pp. 189-214
    • Tang, K.L.1
  • 69
    • 0030660581 scopus 로고    scopus 로고
    • A genomic perspective on protein families
    • Tatusov RL, Koonin EV, Lipman DJ. 1997. A genomic perspective on protein families. Science 278:631-637.
    • (1997) Science , vol.278 , pp. 631-637
    • Tatusov, R.L.1    Koonin, E.V.2    Lipman, D.J.3
  • 70
    • 0038072991 scopus 로고    scopus 로고
    • Perspective: Reverse evolution
    • Teotónio H, Rose MR. 2001. Perspective: reverse evolution. Evolution 55: 653-660.
    • (2001) Evolution , vol.55 , pp. 653-660
    • Teotónio, H.1    Rose, M.R.2
  • 71
    • 84975742565 scopus 로고    scopus 로고
    • A map of human genome variation from population-scale sequencing
    • 1000 Genomes Project Consortium
    • 1000 Genomes Project Consortium. 2010. A map of human genome variation from population-scale sequencing. Nature 467:1061-1073.
    • (2010) Nature , vol.467 , pp. 1061-1073
  • 72
    • 66649132872 scopus 로고    scopus 로고
    • Chaperonin overexpression promotes genetic variation and enzyme evolution
    • Tokuriki N, Tawfik DS. 2009. Chaperonin overexpression promotes genetic variation and enzyme evolution. Nature 459:668-673.
    • (2009) Nature , vol.459 , pp. 668-673
    • Tokuriki, N.1    Tawfik, D.S.2
  • 73
    • 79951581466 scopus 로고    scopus 로고
    • Shark tales: A molecular species-level phylogeny of sharks (Selachimorpha, Chondrichthyes)
    • Vélez-Zuazo X, Agnarsson I. 2011. Shark tales: a molecular species-level phylogeny of sharks (Selachimorpha, Chondrichthyes). Mol Phylogenet Evol. 58:207-217.
    • (2011) Mol Phylogenet Evol. , vol.58 , pp. 207-217
    • Vélez-Zuazo, X.1    Agnarsson, I.2
  • 74
    • 20444386923 scopus 로고    scopus 로고
    • Phylogenetic relationships and evolutionary history of the reef fish family Labridae
    • Westneat MW, AlfaroME. 2005. Phylogenetic relationships and evolutionary history of the reef fish family Labridae. Mol Phylogenet Evol. 36: 370-390.
    • (2005) Mol Phylogenet Evol. , vol.36 , pp. 370-390
    • Westneat, M.W.1    Alfaro, M.E.2
  • 75
    • 0000907353 scopus 로고
    • The roles of mutation, inbreeding, crossbreeding, and selection in evolution
    • Jones DF, editor. Bethesda (MD): Genetics Society of America
    • Wright S. 1932. The roles of mutation, inbreeding, crossbreeding, and selection in evolution. In: Jones DF, editor. Proceedings of the Sixth International Congress on Genetics. Vol. 1. Bethesda (MD): Genetics Society of America. p. 356-366.
    • (1932) Proceedings of the Sixth International Congress on Genetics. , vol.1 , pp. 356-366
    • Wright, S.1
  • 76
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: Phylogenetic analysis by maximum likelihood
    • Yang Z. 2007. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24:1586-1591.
    • (2007) Mol Biol Evol. , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 77
    • 0029891261 scopus 로고    scopus 로고
    • Evolutionary relationships of the coelacanth, lungfishes, and tetrapods based on the 28S ribosomal RNA gene
    • Zardoya R, Meyer A. 1996. Evolutionary relationships of the coelacanth, lungfishes, and tetrapods based on the 28S ribosomal RNA gene. Proc Natl Acad Sci U S A. 93:5449-5454.
    • (1996) Proc Natl Acad Sci U S A , vol.93 , pp. 5449-5454
    • Zardoya, R.1    Meyer, A.2
  • 78
    • 0035912836 scopus 로고    scopus 로고
    • On the origin of and phylogenetic relationships among living amphibians
    • Zardoya R, Meyer A. 2001. On the origin of and phylogenetic relationships among living amphibians. Proc Natl Acad Sci U S A. 98: 7380-7383.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 7380-7383
    • Zardoya, R.1    Meyer, A.2
  • 79
    • 1942467024 scopus 로고    scopus 로고
    • Genetic changes associated with floral adaptation restrict future evolutionary potential
    • Zufall RA, Rausher MD. 2004. Genetic changes associated with floral adaptation restrict future evolutionary potential. Nature 428: 847-850.
    • (2004) Nature , vol.428 , pp. 847-850
    • Zufall, R.A.1    Rausher, M.D.2


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