Bivalvia-A discussion of known unknowns

American Malacological Bulletin

Volumn 31, Issue 1, 2013, Pages 123-133

  Bieler, Rüdiger ^a   Mikkelsen, Paula M ^b   Giribet, Gonzalo ^c  

^a FIELD MUSEUM OF NATURAL HISTORY   (United States)

^b Department of Obstetrics Gynecology   (United States)

^c HARVARD UNIVERSITY   (United States)

Author keywords

bivalves; phylogeny; systematics; taxonomy; technique

Indexed keywords

EID: 84874059451     PISSN: 07402783     EISSN: None     Source Type: Journal    
DOI: 10.4003/006.031.0105     Document Type: Conference Paper

References (161)

1. Adamkewicz, S. L., M. G. Harasewych, J. Blake, D. Saudek, and C. J. Bult. 1997. A molecular phylogeny of the bivalve mollusks. Molecular Biology and Evolution 14: 619-629.
2. Alejandrino, A., L. Puslednik, and J. M. Serb. 2011. Convergent and parallel evolution in life habit of the scallops (Bivalvia: Pec-tinidae). BMC Evolutionary Biology 11: 164. doi:10.1186/1471-2148-11-164
3. Ambrose, W. G., M. L. Carroll, M. Greenacre, S. R. Thorrold, and K. W. McMahon. 2006. Variation in Serripes groenlandicus (Bivalvia) growth in a Norwegian high-Arctic fjord: Evidence for local-and large-scale climatic forcing. Global Change Biology 12: 1595-1607.
4. Appeltans, W., P. Bouchet, G. A. Boxshall, K. Fauchald, D. P. Gordon, B. W. Hoeksema, G. C. B. Poore, R. W. M. van Soest, S. Stöhr, T. C. Walter, and M. J. Costello, eds. 2011. World Register of Marine Species (WoRMS). http://www.marinespecies.org, last accessed 22 January 2012.
5. Beesley, P. L., G. J. B. Ross, and A. Wells, eds. 1998. Mollusca: The Southern Synthesis. Fauna of Australia. Vol. 5 (in 2 parts). CSIRO Publishing, Melbourne, Australia, 1234 pp.
6. Bettencourt, R., M. Pinheiro, C. Egas, P. Gomes, M. Afonso, T. Shank, and R. S. Santos. 2010. High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus. BMC Ge-nomics 11: 559. doi:10.1186/1471-2164-11-559
7. Beukema, J. J. and R. Dekker. 2005. Decline of recruitment success in cockles and other bivalves in the Wadden Sea: Possible role of climate change, predation on postlarvae and fisheries. Marine Ecology Progress Series 287: 149-167.
8. Bieler, R., ed. 2006. Bivalvia-a look at the branches. Zoological Journal of the Linnean Society 148: 1-331.
9. Bieler, R., J. G. Carter, and E. V. Coan. 2010. Classification of bivalve families. In: P. Bouchet and J.-P. Rocroi, Nomenclator of bivalve families. Malacologia 52: 113-133.
10. Bieler, R., K. Chalermwat, P. M. Mikkelsen, K. S. Tan, and F. E. Wells, eds. 2008. Molluscs of Eastern Thailand (Proceedings of the International Marine Bivalve Workshop, Chantaburi, Thailand, August-September 2005, with contributions on other mol-luscan groups). Raffles Bulletin of Zoology Supplement 18: ii + 264 pp.
11. Bieler, R. and P. M. Mikkelsen, 1992. Preliminary phylogenetic analysis of the bivalve family Galeommatidae, with a discussion of taxonomic characters. American Malacological Bulletin 9: 157-164.
12. Bieler, R. and P. M. Mikkelsen. 2006. Bivalvia-a look at the branches. Zoological Journal of the Linnean Society 148: 223-235.
13. Boss, K. J. 1982. Mollusca. In: S. P. Parker, ed., Synopsis & Classification of Living Organisms, vol. 1, McGraw-Hill, New York. Pp. 945-1166.
14. Bouchet, P. and J.-P. Rocroi. 2010. Nomenclator of bivalve families; with a classification of bivalve families by R. Bieler, J. G. Carter and E. V. Coan. Malacologia 52: 1-184.
15. Bouchet, P., P. Lozouet, P. Maestrati, and V. Heros. 2002. Assessing the magnitude of species richness in tropical marine environments: Exceptionally high numbers of molluscs at a New Caledonia site. Biological Journal of the Linnean Society 75: 421-436.
16. Breton, S., H. Doucet-Beaupré, D. T. Stewart, W. R. Hoeh, and P. U. Blier. 2007. The unusual system of doubly uniparental inheritance of mtDNA: Isn't one enough? Trends in Genetics 23: 465-474.
17. Bretsky, S. S. 1971. Evaluation of the efficacy of numerical taxonom-ic methods: An example from the bivalve mollusks. Systematic Zoology 20: 204-222.
18. Butler, P. G., C. A. Richardson, J. D. Scourse, A. D. Wanamaker, Jr., T. M. Shammon, and J. D. Bennell. 2010. Marine climate in the Irish Sea: Analysis of a 489-year marine master chronology derived from growth increments in the shell of the clam Arctica islandica. Quaternary Science Reviews 29: 1614-1632.
19. Campbell, D. C., K. J. Hoekstra, and J. G. Carter. 1998. 18S ribo-somal DNA and evolutionary relationships within the Bivalvia. In: P. A. Johnston, and L. W. Haggart, eds., Bivalves: An Eon of Evolution-Palaeobiological Studies Honoring Norman D. Newell, University of Calgary Press, Calgary, Canada. Pp. 75-85.
20. Campbell, D. C. and C. Lydeard. 2012. The genera of Pleurobemini (Bivalvia: Unionidae: Ambleminae). American Malacological Bulletin 30: 19-38.
21. Campbell, M. R., G. Steiner, L. D. Campbell, and H. Dreyer. 2004. Recent Chamidae (Bivalvia) from the Western Atlantic Ocean. Malacologia 46: 381-415.
22. Canapa, A., S. Schiaparelli, I. Marota, and M. Barucca. 2003. Molecular data from the 16S rRNA gene for the phylogeny of Veneri-dae (Mollusca: Bivalvia). Marine Biology 142: 1125-1130.
23. Cannuel, R. and P. G. Beninger. 2006. Gill development, functional and evolutionary implications in the Pacific oyster Crassostrea gigas (Bivalvia: Ostreidae). Marine Biology 149: 547-563.
24. Cannuel, R., P. G. Beninger, H. McCombie, and P. Boudry. 2009. Gill development and its functional and evolutionary implications in the blue mussel Mytilus edulis (Bivalvia: Mytilidae). Biological Bulletin 217: 173-188.
25. Carter, J. G., C. R. Altaba, L. C. Anderson, R. Araujo, A. S. Biakov, A. E. Bogan, D. C. Campbell, M. Campbell, C. Jin-hua, J. C. W. Cope, G. Delvene, H. H. Dijkstra, F. Zong-jie, R. N. Gardner, V. A. Gavrilova, I. A. Goncharova, P. J. Harries, J. H. Hartman, M. Hautmann, W. R. Hoeh, J. Hylleberg, J. Bao-yu, P. Johnston, L. Kirkendale, K. Kleemann, J. Koppka, J. Kříž, D. Machado, N. Malchus, A. Márquez-Aliaga, J.-P. Masse, C. A. McRoberts, P. U. Middelfart, S. Mitchell, L. A. Nevesskaja, S. Özer, J. Pojeta Jr., I. V. Polubotko, J. M. Pons, S. Popov, T. Sánchez, A. F. Sartori, R. W. Scott, I. I. Sey, J. H. Signorelli, V. V. Silantiev, P. W. Skelton, T. Steuber, J. B. Waterhouse, G. L. Wingard, and T. Yancey. 2011. A synoptical classification of the Bivalvia (Mollusca). Paleontological Contributions 4: 1-47.
26. Carter, J. G., D. C. Campbell, and M. R. Campbell. 2000. Cladistic perspectives on early bivalve evolution. In: E. M. Harper, J. D. Taylor and J. A. Crame, eds. The Evolutionary Biology of the Bivalvia. The Geological Society of London, London, United Kingdom. Pp. 47-79.
27. Cartwright, J. H. and A. G. Checa. 2007. The dynamics of nacre self-assembly. Journal of the Royal Society Interface 4: 491-504.
28. Checa, A.G., J. Ramírez-Rico, A. González-Segura, and A. Sánchez-Navas. 2009. Nacre and false nacre (foliated aragonite) in extant monoplacophorans (= Tryblidiida: Mollusca). Naturwissenschaften 96: 111-122.
29. Clark, M. S., M. A. S. Thorne, F. A. Vieira, J. C. R. Cardoso, D. M. Power, and L. S. Peck. 2010. Insights into shell deposition in the Antarctic bivalve Laternula elliptica: Gene discovery in the mantle transcriptome using 454 pyrosequencing. BMC Ge-nomics 11: 362. doi: 10.1186/1471-2164-11-362
30. CLEMAM-Check List of European Marine Mollusca. 2012. http://www.somali. asso.fr/clemam, last accessed 22 January 2012.
31. Coan, E. V., P. Valentich-Scott, and F. R. Bernard. 2000. Bivalve Seashells of Western North America: Marine Bivalve Mollusks from Arctic Alaska to Baja California. Santa Barbara Museum of Natural History, Santa Barbara, California, viii + 764 pp.
32. Craft, J. A., J. A. Gilbert, B. Temperton, K. E. Dempsey, K. Ashelford, B. Tiwari, T. H. Hutchinson, and J. K. Chipman. 2010. Pyrosequencing of Mytilus galloprovincialis cDNAs: Tissue-specific expression patterns. PLoS ONE 5: e8875. doi:10.1371/journal.pone.0008875
33. Cragga, S. M., M.-C. Jumela, F. A. Al-Horanib, and I. W. Hendya. 2009. The life history characteristics of the wood-boring bivalve Teredo bartschi are suited to the elevated salinity, oligo-trophic circulation in the Gulf of Aqaba, Red Sea. Journal of Experimental Marine Biology and Ecology 375: 99-105.
34. Davis, G. M., Y.-H. Kuo, K. E. Hoagland, P.-L. Chen, H.-M. Yan, and D.-J. Chen. 1984. Kunmingia, a new genus of Triculinae (Gastropoda: Pomatiopsidae) from China: Phenetic and cla-distic relationship. Proceedings of the Academy of Natural Sciences of Philadelphia 136: 165-193.
35. Dietl, G. P. 2003. Coevolution of a marine gastropod predator and its dangerous bivalve prey. Biological Journal of the Linnean Society 80: 409-436.
36. Distel, D. L. 2000. Phylogenetic relationships among Mytilidae (Bivalvia): 18S rRNA data suggest convergence in mytilid body plans. Molecular Phylogenetics and Evolution 15: 25-33.
37. Distel, D. L., M. Amin, A. Burgoyne, E. Litton, G. Mamangkey, W. Morrill, J. Nove, N. Wood, and J. Yang. 2011. Molecular phylog-eny of Pholadoidea Lamarck, 1809 supports a single origin for xy-lotrophy (wood feeding) and xylotrophic bacterial endosymbiosis in Bivalvia. Molecular Phylogenetics and Evolution 61: 245-254.
38. Dobzhansky, T. 1973. Biology, molecular and organismic. American Biology Teacher 4: 443-452.
39. Doucet-Beaupré, H., S. Breton, E. G. Chapman, P. U. Blier, A. E. Bogan, D. T. Stewart, and W. R. Hoeh. 2010. Mitochondrial phylogenomics of the Bivalvia (Mollusca): Searching for the origin and mitogenomic correlates of doubly uniparen-tal inheritance of mtDNA. BMC Evolutionary Biology 10: 50. doi:10.1186/1471-2148-10-50
40. Dreyer, H., G. Steiner, and E. M. Harper. 2003. Molecular phylogeny of Anomalodesmata (Mollusca: Bivalvia) inferred from 18S rRNA sequences. Zoological Journal of the Linnean Society 139: 229-246.
41. Dumbauld, B. R., J. L. Ruesink, and S. S. Rumrill. 2009. The ecological role of bivalve shellfish aquaculture in the estuarine environment: A review with application to oyster and clam culture in West Coast (USA) estuaries. Aquaculture 290: 196-223.
42. Dunca, E., H. Mutvei, P. Göransson, C. M. Mörth, B. R. Schöne, M. J. Whitehouse, M. Elfman, and S. P. Baden. 2009. Using ocean quahog (Arctica islandica) shells to reconstruct palaeoen-vironment in Öresund, Kattegat and Skagerrak, Sweden. International Journal of Earth Sciences 98: 3-17.
43. Dunn, C. W., A. Hejnol, D. Q. Matus, K. Pang, W. E. Browne, S. A. Smith, E. C. Seaver, G. W. Rouse, M. Obst, G. D. Edgecombe, M. V. Sørensen, S. H. D. Haddock, A. Schmidt-Rhaesa, A. Okusu, R. M. Kristensen, W. C. Wheeler, M. Q. Martindale, and G. Giribet. 2008. Broad taxon sampling improves resolution of the Animal Tree of Life. Nature 452: 745-749.
44. Eble, G. 2003. Morphological modularity and macroevolution: Conceptual and empirical aspects. In: W. Callebaut and D. Rasskin-Gutman, eds., Modularity: Understanding the Development and Evolution of Natural Complex Systems, MIT Press, Boston, Massachusetts. Pp. 221-238.
45. Ekblom, R. and J. Galindo. 2011. Applications of next generation sequencing in molecular ecology of non-model organisms. Heredity 107: 1-15.
46. Elicki, O. and S. Gursu. 2009. First record of Pojetaia runnegari Jell, 1980 and Fordilla Barrande, 1881 from the Middle East (Taurus Mountains, Turkey) and critical review of Cambrian bivalves. Palaeontologische Zeitschrift 83: 267-291.
47. Etter, R. J., E. E. Boyle, A. Glazier, R. M. Jennings, E. Dutra, and M. R. Chase. 2011. Phylogeography of a pan-Atlantic abyssal protobranch bivalve: Implications for evolution in the Deep Atlantic. Molecular Ecology 20: 829-843.
48. Etter, R. J., M. A. Rex, M. R. Chase, and J. M. Quattro. 2005. Population differentiation decreases with depth in deep-sea bivalves. Evolution 59: 1479-1491.
49. Giribet, G. and S. Carranza. 1999. What can 18S rDNA do for bivalve phylogeny? Journal of Molecular Evolution 48: 256-261.
50. Giribet, G. and D. L. Distel. 2003. Bivalve phylogeny and molecular data. In: C. Lydeard and D. R. Lindberg, eds., Molecular Sys-tematics and Phylogeography of Mollusks. Smithsonian Books, Washington, District of Columbia. Pp. 45-90.
51. Giribet, G., A. Okusu, A. Lindgren, S. Huff, M. Schrödl, and M. Nishiguchi. 2006. Evidence for a clade composed of molluscs with serially repeated structures: Monoplacophorans are related to chitons. Proceedings of the National Academy of Sciences of the United States of America A 103: 7723-7728.
52. Giribet, G. and W. Wheeler. 2002. On bivalve phylogeny: A highlevel analysis of the Bivalvia (Mollusca) based on combined morphology and DNA sequence data. Invertebrate Biology 121: 271-324.
53. Glover, E. A. and J. D. Taylor. 2010. Needles and pins: Acicular crystalline periostracal calcification in venerid bivalves (Bivalvia: Veneridae). Journal of Molluscan Studies 76: 157-179.
54. Gomez, M. del P., L. Espinosa, N. Ramirez, and E. Nasi. 2011. Arrestin in ciliary invertebrate photoreceptors: Molecular identi-fication and functional analysis in vivo. Journal of Neuroscience 31: 1811-1819.
55. Gosling, E. M. 2003. Bivalve Molluscs: Biology, Ecology and Culture. Blackwell Publishing, Oxford, United Kingdom.
56. Graf, D. L. and K. S. Cummings. 2006. Palaeoheterodont diversity (Mollusca: Trigonioida: Unionoida): What we know and what we wish we knew about freshwater mussel evolution. Zoological Journal of the Linnean Society 148: 343-394.
57. Grande, C. and N. H. Patel. 2009. Nodal signalling is involved in left-right asymmetry in snails. Nature 457: 1007-1011.
58. Harasewych, M. G. 1984. Comparative anatomy of four primitive muricacean gastropods: Implications for trophonine phylog-eny. American Malacological Bulletin 3: 11-26.
59. Harper, E. M., J. D. Taylor, and J. A. Crame, eds. 2000. The Evolutionary Biology of the Bivalvia. Geological Society special publication 177. The Geological Society, London, United Kingdom.
60. Harper, E., H. Dreyer, and G. Steiner. 2006. Reconstructing the Anomalodesmata (Mollusca: Bivalvia): Morphology and molecules. Zoological Journal of the Linnean Society 148: 395-420.
61. Haszprunar, G., C. Schander, and K. M. Halanych. 2008. Relationships of higher molluscan taxa. In: W. F. Ponder and D. R. Lindberg, eds., Phylogeny and Evolution of the Mollusca, University of California Press, Berkeley, California. Pp. 19-32.
62. Healy, J. M., R. Bieler, and P. M. Mikkelsen. 2008. Spermatozoa of the Anomalodesmata (Bivalvia, Mollusca) with special reference to relationships within the group. Acta Zoologica 88: 339-350.
63. Herbers, K. 1913. Entwicklungsgeschichte von Anodonta cellensis Schröt. Zeitschrift für Wissenschaftliche Zoologie 108 ("1914"): 1-174. [In German]
64. Houbrick, R. S. 1984. Revision of higher taxa in genus Cerithidea (Mesogastropoda: Potamididae) based on comparative morphology and biological data. American Malacological Bulletin 2: 1-20.
65. Huber, M. 2010. Compendium of Bivalves. Conchbooks, Hackenheim, Germany, 901 pp. + CD.
66. Huber, M. and F. Lorenz. 2007. Empressostrea kostini n. gen., n. sp. (Bivalvia: Ostreoidea), a mysterious giant from the Spratly Islands, South China Sea. Club Conchylia Informationen 38: 26-41.
67. Huff, S. W., D. Campbell, D. L. Gustafson, C. Lydeard, C. R. Altaba, and G. Giribet. 2004. Investigations into the phylogenetic relationships of the threatened freshwater pearlmussels (Bivalvia, Unionoidea, Margaritiferidae) based on molecular data: Implications for their taxonomy and biogeography. Journal of Mol-luscan Studies 70: 379-388.
68. Jablonski, D., K. Roy, and J. W. Valentine. 2006. Out of the tropics: Evolutionary dynamics of the latitudinal diversity gradient. Science 314: 102-106.
69. Jackson, D. J., G. Wörheide, and B. M. Degnan. 2007. Dynamic expression of ancient and novel molluscan shell genes during ecological transitions. BMC Evolutionary Biology 7: 160. doi:10.1186/1471-2148-7-160
70. Jackson, D. J., C. McDougall, B. Woodcroft, P. Moase, R. A. Rose, M. Kube, R. Reinhardt, D. S. Rokhsar, C. Montagnani, C. Joubert, D. Piquemal, and B. M. Degnan. 2010. Parallel evolution of nacre building gene sets in molluscs. Molecular Biology and Evolution, 27: 591-608.
71. Johnson, A. L. A., J. A. Hickson, A. Bird, B. R. Schöne, P. S. Balson, T. H. E. Heaton, and M. Williams. 2009. Comparative sclerochronology of modern and mid-Pliocene (c. 3.5 Ma) Aequipecten opercularis (Mollusca, Bivalvia): An insight into past and future climate change in the north-east Atlantic region, Palaeogeography Palaeoclimatology Palaeoecol-ogy 284: 164-179.
72. Johnston, P. A. and J. W. Haggart, eds. 1998. Bivalves: An Eon of Evolution. Paleobiological Studies Honoring Norman D. Newell. University of Calgary Press, Calgary, Alberta, Canada, 461 pp.
73. Kappner, I. and R. Bieler. 2006. Phylogeny of venus clams (Bivalvia: Venerinae) as inferred from nuclear and mitochondrial gene sequences. Molecular Phylogenetics and Evolution 40: 317-331.
74. Kirkendale, L. 2009. Their day in the sun: Molecular phylogenetics and origin of photosynthesis in the "other" group of photosyn-thetic marine bivalves (Cardiidae: Fraginae). Biological Journal of the Linnean Society 97: 448-465.
75. Klingenberg, C., A. Badyaev, S. Sowry, and N. Beckwith. 2001. Inferring developmental modularity from morphological integration: Analysis of individual variation and asymmetry in bumblebee wings. American Naturalist 157: 11-23.
76. Kluge, A. G. 1989. A concern for evidence and a phylogenetic hypothesis of relationships among Epicrates (Boidae, Serpentes). Systematic Zoology 38: 7-25.
77. Kocot, K. M., J. T. Cannon, C. Todt, M. R. Citarella, A. B. Kohn, A. Meyer, S. R. Santos, C. Schander, L. L. Moroz, B. Lieb, and K. M. Halanych. 2011. Phylogenomics reveals deep molluscan relationships. Nature 477: 452-456.
78. Kraeuter, J. N and M. Castagna, eds. 2001. Biology of the Hard Clam. Elsevier Science, Amsterdam, The Netherlands.
79. Krug, A. Z., D. Jablonski, K. Roy, and A. G. Beu. 2010. Differential extinction and the contrasting structure of polar marine faunas. PLoS ONE 5: e15362. doi:10.1371/journal.pone.0015362
80. Kuroda, R., B. Endo, M. Abe, and M. Shimizu. 2009. Chiral blasto-mere arrangement dictates zygotic left-right asymmetry pathway in snails. Nature 462: 790-794.
81. Ladoukakis, E. D. and E. Zouros. 2001. Direct evidence for homologous recombination in mussel (Mytilus galloprovincialis) mi-tochondrial DNA. Molecular Phylogenetics and Evolution 18: 1168-1175.
82. Landman, N. H., P. M. Mikkelsen, R. Bieler, and B. Bronson. 2001. Pearls: A Natural History. Harry N. Abrams, New York. 232 pp.
83. Lee, T. and D. Ó Foighil. 2004. Hidden Floridian biodiversity: Mi-tochondrial and nuclear gene trees reveal four cryptic species within the scorched mussel, Brachidontes exustus, species complex. Molecular Ecology 13: 3527-3542.
84. Lee, T. and D. Ó Foighil. 2005. Placing the Floridian marine genetic disjunction into a regional evolutionary context using the "scorched mussel" Brachidontes exustus species complex. Evolution 59: 2139-2158.
85. Leitão, A. and R. Chaves. 2008. Banding for chromosomal identifi-cation in bivalves: A 20-year history. In: R. Russo, Aquaculture 1. Dynamic Biochemistry, Process Biotechnology and Molecular Biology. 2 (Special Issue 1): 44-49. Global Science Books.
86. Lorion, J., B. Buge, C. Cruaud, and S. Samadi. 2010. New insights into diversity and evolution of deep-sea Mytilidae (Mollusca: Bivalvia). Molecular Phylogenetics and Evolution 57: 71-83.
87. Lützen, J. and C. Nielsen. 2005. Galeommatid bivalves from Phuket, Thailand. Zoological Journal of the Linnean Society 144: 261-308.
88. Marko, P. B. and A. L. Moran. 2009. Out of sight, out of mind: High cryptic diversity obscures the identities and histories of geminate species in the marine bivalve subgenus Acar. Journal of Biogeography 36: 1861-1880.
89. Matsumoto, M. 2003. Phylogenetic analysis of the subclass Pterio-morphia (Bivalvia) from mtDNA COI sequences. Molecular Phylogenetics and Evolution 27: 429-440.
90. McDougall, C., K. Green, D. J. Jackson, and B. M. Degnan. 2011. Ultrastructure of the mantle of the gastropod Haliotis asinina and mechanisms of shell regionalization. Cells Tissues Organs 194: 103-107.
91. Middelfart, P. 2002. A revision of the Australian Condylocardiinae (Bivalvia: Carditoidea: Condylocardiidae). Molluscan Research 22: 23-85.
92. Mikkelsen, P. M. 2011. Speciation in modern marine bivalves (Mol-lusca: Bivalvia): Insights from the published record. American Malacological Bulletin 29: 217-245.
93. Mikkelsen, P. M. and R. Bieler. 2007 ("2008"). Seashells of Southern Florida: Living Marine Mollusks of the Florida Keys and Adjacent Regions. Bivalves. Princeton University Press, Princeton, New Jersey.
94. Mikkelsen, P. M., R. Bieler, I. Kappner, and T. A. Rawlings. 2006. Phylogeny of Veneroidea (Mollusca: Bivalvia) based on morphology and molecules. Zoological Journal of the Linnean Society 148: 439-521.
95. Milan, M., A. Coppe, R. Reinhardt, L. M. Cancela, R. B. Leite, C. Saavedra, C. Ciofi, G. Chelazzi, T. Patarnello, S. Bortoluzzi, and L. Bargelloni. 2011. Transcriptome sequencing and microarray development for the Manila clam, Ruditapes philippinarum: Genomic tools for environmental monitoring. BMC Genomics 12: 234.
96. Morton, B. 1990. The biology and functional morphology of Cor-bula crassa (Bivalvia: Corbulidae) with special reference to shell structure and formation. In: B. Morton, ed., The Marine Flora and Fauna of Hong Kong and Southern China II, vol. 3. Hong Kong University Press, Hong Kong. Pp. 1055-1073.
97. Morton, B. 2008. The evolution of eyes in the Bivalvia: New insights. American Malacological Bulletin 26: 35-45.
98. Neumayr, M. 1884. Zur Morphologie des Bivalvenschlosses. Sitzungsberichte der Akademie der Wissenschaften zu Wien 88: 385-418. [In German]
99. Newell, R. I. E. 2004. Ecosystem infl uences of natural and cultivated populations of suspension-feeding bivalve molluscs: A review. Journal of Shellfish Research 23: 51-61.
100. Okutani, T. and Y. Fujiwara. 2005. Four protobranch bivalves collected by the ROV Kaiko from hadal depths in the Japan Trench. Venus 63: 87-94.
101. Paalvast, P. and G. van der Velde. 2011. New threats of an old enemy: The distribution of the shipworm Teredo navalis L. (Bivalvia: Teredinidae) related to climate change in the Port of Rotterdam area, The Netherlands. Marine Pollution Bulletin 62: 1822-1829.
102. Parkhaev, P. Y. 2008. The Early Cambrian radiation of Mollusca. In: W. F. Ponder and D. R. Lindberg, eds., Phylogeny and Evolution of the Mollusca, University of California Press, Berkeley, California. Pp. 33-69.
103. PBDB (Paleobiology Database). 2012. http://paleodb.org/cgi-bin/bridge.pl, last accessed 9 September 2012.
104. Pelseneer, P. 1891. Contribution à l'étude des lamellibranches. Archives de Biologie 11: 147-312. [In French]
105. Pérez-García, C., J. Guerra-Varela, P. Morán, and J. J. Pasantes. 2010. Chromosomal mapping of rRNA genes, core histone genes and telomeric sequences in Brachidontes puniceus and Brachidontes rodriguezi (Bivalvia, Mytilidae). BMC Genetics 11: 109.
106. Plazzi, F. A. Ceregato, M. Taviani, and M. Passamonti. 2011. A molecular phylogeny of bivalve mollusks: Ancient radiations and divergences as revealed by mitochondrial genes. PLoS ONE 6: e27147. doi:10.1371/journal.pone.0027147
107. Plazzi, F. and M. Passamonti. 2010. Towards a molecular phylogeny of mollusks: Bivalves' early evolution as revealed by mitochon-drial genes. Molecular Phylogenetics and Evolution 57: 641-657.
108. Pojeta, J. 2000. Cambrian Pelecypoda (Mollusca). American Malaco-logical Bulletin 15: 157-166.
109. Poli, G. S. 1791-1795. Testacea Utriusque Siciliae Eorumque Historia et Anatome, 2 vols. Parma, Italy. [In Latin]
110. Porto, A., F. de Oliveira, L. Shirai, V. De Conto, and G. Marroig. 2009. The evolution of modularity in the mammalian skull I: Morphological integration patterns and magnitudes. Evolutionary Biology 36: 118-135.
111. Prendini, L. 2001. Species or supraspecific taxa as terminals in cla-distic analysis? Groundplans versus exemplars revisited. Systematic Biology 50: 290-300.
112. Purchon, R. D. 1959. Phylogenetic classification of the Lamellibran-chia, with special reference to the Protobranchia. Proceedings of the Malacological Society of London 33: 224-230.
113. Purchon, R. D. and D. Brown. 1969. Phylogenetic interrelationships among families of bivalve mollusks. Malacologia 9: 163-171.
114. Purchon, R. D. 1978. An analytical approach to a classification of the Bivalvia. Philosophical Transactions of the Royal Society of London B 284: 425-436.
115. Puslednik, L. and J. M. Serb. 2008. Molecular phylogenetics of the Pectinidae (Mollusca: Bivalvia) and effect of increased taxon sampling and outgroup selection on tree topology. Molecular Phylogenetics and Evolution 48: 1178-1188.
116. Ridewood, W. G. 1903. On the structure of the gills of the Lamellibran-chia. Philosophical Transactions of the Royal Society of London, Series B, Containing Papers of a Biological Character 195: 147-284.
117. Rosenberg, G. 2009. Malacolog 4.1.1: A Database of Western Atlantic Marine Mollusca http://www.malacolog.org/, last accessed 22 January 2012.
118. Roy, K., G. Hunt, D. Jablonski, A. Z. Krug, and J. W. Valentine. 2009. A macroevolutionary perspective on species range limits. Proceedings: Biological Sciences 276: 1485-1493. doi:10.1098/rspb.2008.1232
119. Salas, C., P. Marina, A. G. Checa, and J. L. Rueda. 2012. The perios-tracum of Digitaria digitaria (Bivalvia: Astartidae): Formation and structure. Journal of Molluscan Studies 78: 34-43.
120. Schneider, J. A. 1992. Preliminary cladistic analysis of the bivalve family Cardiidae. American Malacological Bulletin 9: 145-155.
121. Schneider, J. A. 2001. Bivalve systematics during the 20#sup#th#/sup# century. Journal of Paleontology 75: 1119-1127.
122. Schöne, B. R., J. Fiebig, M. Pfeiffer, R. Gleß, J. Hickson, A. L. A. Johnson, W. Dreyer, and W. Oschmann. 2005. Climate records from a bivalved Methuselah (Arctica islandica, Mollusca; Iceland). Palaeogeography Palaeoclimatology Palaeoecology 228: 130-148.
123. Schwartz, M. L. and R.V. Dimock Jr. 2001. Ultrastructural evidence for nutritional exchange between brooding unionid mussels and their glochidia larvae. Invertebrate Biology 120: 227-236.
124. Serb, J. M. 2008a. Introduction to the symposium "Molluscan Models: Advancing our Understanding of the Eye." American Mala-cological Bulletin 26: 1-2.
125. Serb, J. M. 2008b. Toward developing models to study the disease, ecology, and evolution of the eye in Mollusca. American Mala-cological Bulletin 26: 3-18.
126. Sharma, P. P., V. L. González, G. Y. Kawauchi, S. C. S. Andrade, A. Guzmán, T. M. Collins, E. A. Glover, E. M. Harper, J. M. Healy, P. M. Mikkelsen, J. D. Taylor, R. Bieler, and G. Giribet. 2012. The case against mitochondrial gene phylogenies for inferring ancient relationships: Phylogenetic analysis of four protein-encoding genes largely corroborates the traditional classification of Bivalvia (Mollusca). Molecular Phylogenetics and Evolution 65: 64-74.
127. Silverman, H. G. and F. F. Roberto. 2010. Byssus formation in Mytilus. In: J. Byern and I. Grunwald, eds., Biological Adhesive Systems: From Nature to Technical and Medical Applications, Springer-Verlag, Vienna, Austria. Pp. 273-282.
128. Smith, S., N. G. Wilson, F. Goetz, C. Feehery, S. C. S. Andrade, G. W. Rouse, G. Giribet, and C. W. Dunn. 2011. Resolving the evolutionary relationships of molluscs with phylogenomic tools. Nature 480: 364-367.
129. Speiser, D. L. and S. Johnsen. 2008. Comparative morphology of the concave mirror eyes of scallops (Pectinoidea). American Mala-cological Bulletin 26: 27-33.
130. Speiser, D. I., E. R. Loew, and S. Johnsen. 2011. Spectral sensitivity of the concave mirror eyes of scallops: Potential infl uences of habitat, self-screening and longitudinal chromatic aberration. Journal of Experimental Biology 214: 422-431.
131. Steiner, G. and M. Müller. 1996. What can 18S rDNA do for bivalve phylogeny? Journal of Molecular Evolution 43: 58-70.
132. Stuart, C. T., P. M. Arbizu, C. R. Smith, T. Molodtsova, A. Brandt, R. J. Etter, E. Escobar-Briones, M. C. Fabri, and M. A. Rex. 2008. CeDAMar global database of abyssal biological sampling. Aquatic Biology 4: 143-145.
133. Takeuchi T., T. Kawashima, R. Koyanagi, F. Gyoja, M. Tanaka, T. Ikuta, E. Shoguchi, M. Fujiwara, C. Shinzato, K. Hisata, M. Fujie, T. Usami, K. Nagai, K. Maeyama, K. Okamoto, H. Aoki, T. Ishikawa, T., Masaoka, A. Fujiwara, K. Endo, H. Endo, H. Nagasawa, S. Kinoshita, S. Asakawa, S. Watabe, and N. Satoh. 2012. Draft genome of the Pearl Oyster Pinctada fucata: A platform for understanding bivalve biology. DNA Research, 14 pp. doi:10.1093/dnares/dss005
134. Taylor, J. D. and E. A. Glover. 2010. Chemosymbiotic bivalves. In: S. Kiel, ed., The Vent and Seep Biota, Topics in Geobiology 33, Springer, New York. Pp. 107-135.
135. Taylor, J. D., ed. 1996. Origin and Evolutionary Radiation of the Mol-lusca. Oxford University Press, Oxford, United Kingdom, xiv + 392 pp.
136. Taylor, J. D. and E. A. Glover. 2006. Lucinidae (Bivalvia)-the most diverse group of chemosymbiotic molluscs. Zoological Journal of the Linnean Society 148: 421-438.
137. Taylor, J. D., E. A. Glover, L. Smith, P. Dyal, and S. T. Williams. 2011. Molecular phylogeny and classification of the chemo-symbiotic bivalve family Lucinidae (Mollusca: Bivalvia). Zoological Journal of the Linnean Society 163: 15-49.
138. Taylor, J. D., E. A. Glover, and S. T. Williams. 2005. Another bloody bivalve: Anatomy and relationships of Eucrassatella donacina from south western Australia (Mollusca: Bivalvia: Crassatelli-dae). In: F. E. Wells, D. I. Walker, and G. A. Kendrick, eds., The Marine Flora and Fauna of Esperance, Western Australia, Western Australian Museum, Perth, Australia. Pp. 261-288.
139. Taylor, J. D., E. A. Glover, and S. T. Williams. 2009. Phylogenetic position of the bivalve family Cyrenoididae-Removal from (and further dismantling of) the superfamily Lucinoidea. The Nautilus 123: 9-13.
140. Taylor, J. D., S. T. Williams, E. A. Glover, and P. Dyal. 2007. A molecular phylogeny of heterodont bivalves (Mollusca: Bival-via: Heterodonta): New analyses of 18S and 28S rRNA genes. Zoologica Scripta 36: 587-606.
141. Tëmkin, I. 2006. Morphological perspective on the classification and evolution of Recent Pterioidea (Mollusca: Bivalvia). Zoological Journal of the Linnean Society 148: 253-312.
142. Tëmkin, I. 2010. Molecular phylogeny of pearl oysters and their relatives (Mollusca, Bivalvia, Pterioidea). BMC Evolutionary Biology 10: 342.
143. Thiriot-Quiévreux, C. 2002. Review of the literature on bivalve cytoge-netics in the last ten years. Cahiers de Biologie Marine 43: 17-26.
144. Todt, C. and A. Wanninger. 2010. Of tests, trochs, shells, and spic-ules: Development of the basal mollusk Wirenia argentea (So-lenogastres) and its bearing on the evolution of trochozoan larval key features. Frontiers in Zoology 7: 6.
145. Tsaousis, A. D., D. P. Martin, E. D. Ladoukakis, D. Posada, and E. Zouros. 2005. Widespread recombination in published animal mtDNA sequences. Molecular Biology and Evolution 22: 925-933.
146. Tsubaki, R., Y. Kameda, and M. Kato. 2011. Pattern and process of diversification in an ecologically diverse epifaunal bivalve group Pterioidea (Pteriomorphia, Bivalvia). Molecular Phyloge-netics and Evolution 58: 97-104.
147. Turgeon, D. D., J. F. Quinn Jr., A. E. Bogan, E. V. Coan, F. G. Hochberg, W. G. Lyons, P. M. Mikkelsen, R. J. Neves, C. F. E. Roper, G. Rosenberg, B. Roth, A. Scheltema, F. G. Thompson, M. Vecchione, and J. D. Williams. 1998. Common and Scien-tific Names of Aquatic Invertebrates from the United States and Canada: Mollusks, 2nd ed. American Fisheries Society, Special Publication 26, Bethesda, Maryland, 526 pp. + CD.
148. UCMP. 2001. University of California Museum of Paleontology: The Bivalvia. http://www.ucmp.berkeley.edu/taxa/inverts/mollusca/bivalvia.php, last accessed 29 February 2012.
149. Waller, T. R. 1978. Morphology, morphoclines and a new classifi-cation of the Pteriomorphia (Mollusca: Bivalvia). Philosophical Transactions of the Royal Society of London B 284: 345-365.
150. Waller, T. R. 1998. Origin of the molluscan class Bivalvia and a phy-logeny of major groups. In: P. A. Johnston and J. W. Haggart, eds. Bivalves: An Eon of evolution-Palaeobiological studies honoring Norman D. Newell. University of Calgary Press, Calgary, Canada. Pp. 1-45.
151. Waller, T. R. 2006. Phylogeny of families in the Pectinoidea (Mol-lusca: Bivalvia): Importance of the fossil record. Zoological Journal of the Linnean Society 148: 313-342.
152. Wanninger, A. and G. Haszprunar. 2003. The development of the serotonergic and FMRF-amidergic nervous system in Antalis entalis (Mollusca, Scaphopoda). Zoomorphology 122: 77-85.
153. Wanninger, A., D. Koop, S. Moshel-Lynch, and B. M. Degnan. 2008. Molluscan evolutionary development. In: W. F. Ponder and D. R. Lindberg, eds., Phylogeny and Evolution of the Mollusca, University of California Press, Berkeley and Los Angeles, California. Pp. 427-445.
154. Whelan, N. V., A. J. Geneva, and D. L. Graf. 2011. Molecular phylogenetic analysis of tropical freshwater mussels (Mollusca: Bivalvia: Unionoida) resolves the position of Coelatura and supports a monophyletic Unionidae. Molecular Phylogenetics and Evolution 61: 504-514.
155. Wilkens, L.A. 1986. The visual system of the giant clam Tridacna: Behavioral adaptations. Biological Bulletin 170: 393-408.
156. Wilkens, L.A. 2006. Neurobiology and behavior of the scallop. In: N. Shumway and G.J. Parson eds., Scallops: Biology, Ecology and Aquaculture, Second Edition, Elsevier Science Publ., Amsterdam, The Netherlands. Pp. 317-356.
157. Wilkens, L. A. 2008. Primary inhibition by light: A unique property of bivalve photoreceptors. American Malacological Bulletin 26: 101-109.
158. Wilkens, L.A. and B. W. Ache. 1977. Visual responses in the central nervous system of the scallop. Experientia 33: 1338-1340.
159. Williams, S. T., J. D. Taylor, and E. A. Glover. 2004. Molecular phy-logeny of the Lucinoidea (Bivalvia): Non-monophyly and separate acquisition of bacterial chemosymbiosis. Journal of Molluscan Studies 70: 187-202.
160. Wilson, N. G., G. W. Rouse, and G. Giribet. 2010. Assessing the mol-luscan hypothesis Serialia (Monoplacophora + Polyplacophora) using novel molecular data. Molecular Phylogenetics and Evolution 54: 187-193.
161. Zardus, J. D., R. J. Etter, M. R. Chase, M. A. Rex, and E. E. Boyle. 2006. Bathymetric and geographic population structure in the pan-Atlantic deep-sea bivalve Deminucula atacellana (Schenck, 1939). Molecular Ecology 15: 639-651.