-
1
-
-
34248200744
-
Specific roles of α- and γ-tocopherol in abiotic stress responses of transgenic tobacco plants
-
Abbasi AR, Hajirezaei M, Hofius D, Sonnewald U, Voll LM (2007) Specific roles of α- and γ-tocopherol in abiotic stress responses of transgenic tobacco plants. Plant Physiol 143: 720-738.
-
(2007)
Plant Physiol
, vol.143
, pp. 720-738
-
-
Abbasi, A.R.1
Hajirezaei, M.2
Hofius, D.3
Sonnewald, U.4
Voll, L.M.5
-
3
-
-
33344476119
-
Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development
-
Alba R, Payton P, Fei Z, McQuinn R, Debbie P, Martin GB, Tanksley SD, Giovannoni JJ (2005) Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development. Plant Cell 17: 2954-2965.
-
(2005)
Plant Cell
, vol.17
, pp. 2954-2965
-
-
Alba, R.1
Payton, P.2
Fei, Z.3
McQuinn, R.4
Debbie, P.5
Martin, G.B.6
Tanksley, S.D.7
Giovannoni, J.J.8
-
4
-
-
79959937810
-
Genetic dissection of vitamin E biosynthesis in tomato
-
Almeida J, Quadrana L, Asís R, Setta N, de Godoy F, Bermúdez L, Otaiza SN, Correa da Silva JV, Fernie AR, Carrari F, Rossi M (2011) Genetic dissection of vitamin E biosynthesis in tomato. J Exp Bot 62: 3781-3798.
-
(2011)
J Exp Bot
, vol.62
, pp. 3781-3798
-
-
Almeida, J.1
Quadrana, L.2
Asís, R.3
Setta, N.4
de Godoy, F.5
Bermúdez, L.6
Otaiza, S.N.7
Correa da Silva, J.V.8
Fernie, A.R.9
Carrari, F.10
Rossi, M.11
-
5
-
-
3442876969
-
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
-
Andersen CL, Jensen JL, Ørntoft TF (2004) Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res 64: 5245-5250.
-
(2004)
Cancer Res
, vol.64
, pp. 5245-5250
-
-
Andersen, C.L.1
Jensen, J.L.2
Ørntoft, T.F.3
-
6
-
-
3242715114
-
Reactive oxygen species: metabolism, oxidative stress, and signal transduction
-
Apel K, Hirt H (2004) Reactive oxygen species: metabolism, oxidative stress, and signal transduction. Annu Rev Plant Biol 55: 373-399.
-
(2004)
Annu Rev Plant Biol
, vol.55
, pp. 373-399
-
-
Apel, K.1
Hirt, H.2
-
7
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
Bailey TL, Elkan C (1994) Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc Int Conf Intell Syst Mol Biol 2: 28-36.
-
(1994)
Proc Int Conf Intell Syst Mol Biol
, vol.2
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
8
-
-
67849122320
-
MEME suite: tools for motif discovery and searching
-
Bailey TL, Bodén M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS (2009) MEME suite: tools for motif discovery and searching. Nucleic Acids Res 37: W202-W208.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Bailey, T.L.1
Bodén, M.2
Buske, F.A.3
Frith, M.4
Grant, C.E.5
Clementi, L.6
Ren, J.7
Li, W.W.8
Noble, W.S.9
-
9
-
-
77952992988
-
Characteristics of the tomato chromoplast revealed by proteomic analysis
-
Barsan C, Sanchez-Bel P, Rombaldi C, Egea I, Rossignol M, Kuntz M, Zouine M, Latché A, Bouzayen M, Pech JC (2010) Characteristics of the tomato chromoplast revealed by proteomic analysis. J Exp Bot 61: 2413-2431.
-
(2010)
J Exp Bot
, vol.61
, pp. 2413-2431
-
-
Barsan, C.1
Sanchez-Bel, P.2
Rombaldi, C.3
Egea, I.4
Rossignol, M.5
Kuntz, M.6
Zouine, M.7
Latché, A.8
Bouzayen, M.9
Pech, J.C.10
-
10
-
-
78651327629
-
The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl
-
Bombarely A, Menda N, Tecle IY, Buels RM, Strickler S, Fischer-York T, Pujar A, Leto J, Gosselin J, Mueller LA (2011) The Sol Genomics Network (solgenomics. net): growing tomatoes using Perl. Nucleic Acids Res 39: 1149-1155.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 1149-1155
-
-
Bombarely, A.1
Menda, N.2
Tecle, I.Y.3
Buels, R.M.4
Strickler, S.5
Fischer-York, T.6
Pujar, A.7
Leto, J.8
Gosselin, J.9
Mueller, L.A.10
-
11
-
-
6444240408
-
Regulation of carotenoid biosynthesis in plants: evidence for a key role of hydroxymethylbutenyl diphosphate reductase in controlling the supply of plastidial isoprenoid precursors
-
Botella-Pavía P, Besumbes O, Phillips MA, Carretero-Paulet L, Boronat A, Rodriguez-Concepcion M (2004) Regulation of carotenoid biosynthesis in plants: evidence for a key role of hydroxymethylbutenyl diphosphate reductase in controlling the supply of plastidial isoprenoid precursors. Plant J 40: 188-199.
-
(2004)
Plant J
, vol.40
, pp. 188-199
-
-
Botella-Pavía, P.1
Besumbes, O.2
Phillips, M.A.3
Carretero-Paulet, L.4
Boronat, A.5
Rodriguez-Concepcion, M.6
-
12
-
-
58149200922
-
AthaMap, integrating transcriptional and post-transcriptional data
-
Bülow L, Engelmann S, Schindler M, Hehl R (2009) AthaMap, integrating transcriptional and post-transcriptional data. Nucleic Acids Res 37: D983-D986.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Bülow, L.1
Engelmann, S.2
Schindler, M.3
Hehl, R.4
-
13
-
-
0032104856
-
Regulation of abscisic acid-induced transcription
-
Busk PK, Pages M (1998) Regulation of abscisic acid-induced transcription. Plant Mol Biol 37: 425-435.
-
(1998)
Plant Mol Biol
, vol.37
, pp. 425-435
-
-
Busk, P.K.1
Pages, M.2
-
14
-
-
64149097786
-
The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments
-
Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, Kubista M, Mueller R, Nolan T, Pfaffl MW, Shipley GL, Vandesompele J, Wittwer CT (2009) The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem 55: 611-622.
-
(2009)
Clin Chem
, vol.55
, pp. 611-622
-
-
Bustin, S.A.1
Benes, V.2
Garson, J.A.3
Hellemans, J.4
Huggett, J.5
Kubista, M.6
Mueller, R.7
Nolan, T.8
Pfaffl, M.W.9
Shipley, G.L.10
Vandesompele, J.11
Wittwer, C.T.12
-
15
-
-
33745614596
-
Metabolic regulation underlying tomato fruit development
-
Carrari F, Fernie AR (2006) Metabolic regulation underlying tomato fruit development. J Exp Bot 57: 1883-1897.
-
(2006)
J Exp Bot
, vol.57
, pp. 1883-1897
-
-
Carrari, F.1
Fernie, A.R.2
-
16
-
-
33845665396
-
Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behaviour
-
Carrari F, Baxter C, Usadel B, Urbanczyk-Wochniak E, Zanor MI, Nunes-Nesi A, Nikiforova V, Centero D, Ratzka A, Pauly M, Sweetlove L, Fernie AR (2006) Integrated analysis of metabolite and transcript levels reveals the metabolic shifts that underlie tomato fruit development and highlight regulatory aspects of metabolic network behaviour. Plant Physiol 142: 1380-1396.
-
(2006)
Plant Physiol
, vol.142
, pp. 1380-1396
-
-
Carrari, F.1
Baxter, C.2
Usadel, B.3
Urbanczyk-Wochniak, E.4
Zanor, M.I.5
Nunes-Nesi, A.6
Nikiforova, V.7
Centero, D.8
Ratzka, A.9
Pauly, M.10
Sweetlove, L.11
Fernie, A.R.12
-
17
-
-
33750487491
-
Enhanced flux through the methylerythritol 4-phosphate pathway in Arabidopsis plants overexpressing deoxyxylulose 5-phosphate reductoisomerase
-
Carretero-Paulet L, Cairó A, Botella-Pavía P, Besumbes O, Campos N, Boronat A, Rodríguez-Concepción M (2006) Enhanced flux through the methylerythritol 4-phosphate pathway in Arabidopsis plants overexpressing deoxyxylulose 5-phosphate reductoisomerase. Plant Mol Biol 62: 683-695.
-
(2006)
Plant Mol Biol
, vol.62
, pp. 683-695
-
-
Carretero-Paulet, L.1
Cairó, A.2
Botella-Pavía, P.3
Besumbes, O.4
Campos, N.5
Boronat, A.6
Rodríguez-Concepción, M.7
-
18
-
-
0037316477
-
Rank order metrics for quantifying the association of sequence features with gene regulation
-
Clarke ND, Granek JA (2003) Rank order metrics for quantifying the association of sequence features with gene regulation. Bioinformatics 19: 212-218.
-
(2003)
Bioinformatics
, vol.19
, pp. 212-218
-
-
Clarke, N.D.1
Granek, J.A.2
-
19
-
-
67650915528
-
Unravelling the regulatory mechanisms that modulate the MEP pathway in higher plants
-
Córdoba E, Salmi M, León P (2009) Unravelling the regulatory mechanisms that modulate the MEP pathway in higher plants. J Exp Bot 60: 2933-2943.
-
(2009)
J Exp Bot
, vol.60
, pp. 2933-2943
-
-
Córdoba, E.1
Salmi, M.2
León, P.3
-
20
-
-
80051915965
-
Identification of genes in the phenylalanine metabolic pathway by ectopic expression of a MYB transcription factor in tomato fruit
-
Dal Cin V, Tiemana DM, Tohge T, McQuinn R, de Vos RCH, Osorio S, Schmelz EA, Taylor MG, Smits-Kroon MT, Schuurink RC, Haring MA, Giovannoni J, Fernie AR, Klee HJ (2011) Identification of genes in the phenylalanine metabolic pathway by ectopic expression of a MYB transcription factor in tomato fruit. Plant Cell 23: 2738-2753.
-
(2011)
Plant Cell
, vol.23
, pp. 2738-2753
-
-
Dal Cin, V.1
Tiemana, D.M.2
Tohge, T.3
McQuinn, R.4
de Vos, R.C.H.5
Osorio, S.6
Schmelz, E.A.7
Taylor, M.G.8
Smits-Kroon, M.T.9
Schuurink, R.C.10
Haring, M.A.11
Giovannoni, J.12
Fernie, A.R.13
Klee, H.J.14
-
21
-
-
80052736854
-
Vitamin E
-
J. C. Kader and M. Delseny (Eds.), London: Academic Press
-
DellaPenna D, Mène-Saffrané L (2011) Vitamin E. In: Kader JC, Delseny M (eds) Advances in botanical research, vol 59. Academic Press, London, pp 179-227.
-
(2011)
Advances in Botanical Research
, vol.59
, pp. 179-227
-
-
DellaPenna, D.1
Mène-Saffrané, L.2
-
22
-
-
27644474656
-
Metabolic engineering of the mevalonate and non-mevalonate isopentenyl diphosphate-forming pathways for the production of health-promoting isoprenoids in tomato
-
Enfissi EMA, Fraser PD, Lois LM, Boronat A, Schuch W, Bramley PM (2005) Metabolic engineering of the mevalonate and non-mevalonate isopentenyl diphosphate-forming pathways for the production of health-promoting isoprenoids in tomato. Plant Biotech J 3: 17-27.
-
(2005)
Plant Biotech J
, vol.3
, pp. 17-27
-
-
Enfissi, E.M.A.1
Fraser, P.D.2
Lois, L.M.3
Boronat, A.4
Schuch, W.5
Bramley, P.M.6
-
23
-
-
77953194787
-
Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit
-
Enfissi EM, Barneche F, Ahmed I, Lichtlé C, Gerrish C, McQuinn RP, Giovannoni JJ, Lopez-Juez E, Bowler C, Bramley PM, Fraser PD (2010) Integrative transcript and metabolite analysis of nutritionally enhanced DE-ETIOLATED1 downregulated tomato fruit. Plant Cell 22: 1190-1215.
-
(2010)
Plant Cell
, vol.22
, pp. 1190-1215
-
-
Enfissi, E.M.1
Barneche, F.2
Ahmed, I.3
Lichtlé, C.4
Gerrish, C.5
McQuinn, R.P.6
Giovannoni, J.J.7
Lopez-Juez, E.8
Bowler, C.9
Bramley, P.M.10
Fraser, P.D.11
-
24
-
-
58549086530
-
Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process
-
Expósito-Rodríguez M, Borges AA, Borges-Pérez A, Pérez JA (2008) Selection of internal control genes for quantitative real-time RT-PCR studies during tomato development process. BMC Plant Biol 8: 131.
-
(2008)
BMC Plant Biol
, vol.8
, pp. 131
-
-
Expósito-Rodríguez, M.1
Borges, A.A.2
Borges-Pérez, A.3
Pérez, J.A.4
-
25
-
-
0033167281
-
Interaction between composite elements in the napA promoter: both the B-box ABA-responsive complex and the RY/G complex are necessary for seed-specific expression
-
Ezcurra I, Ellerström M, Wycliffe P, Stalberg K, Rask L (1999) Interaction between composite elements in the napA promoter: both the B-box ABA-responsive complex and the RY/G complex are necessary for seed-specific expression. Plant Mol Biol 40: 699-709.
-
(1999)
Plant Mol Biol
, vol.40
, pp. 699-709
-
-
Ezcurra, I.1
Ellerström, M.2
Wycliffe, P.3
Stalberg, K.4
Rask, L.5
-
26
-
-
77951114666
-
Tocochromanol functions in plants: antioxidation and beyond
-
Falk J, Munné-Bosch S (2010) Tocochromanol functions in plants: antioxidation and beyond. J Exp Bot 61: 1549-1566.
-
(2010)
J Exp Bot
, vol.61
, pp. 1549-1566
-
-
Falk, J.1
Munné-Bosch, S.2
-
27
-
-
84859029671
-
Vitamin deficiencies in humans: can plant science help?
-
Fitzpatrick TB, Basset GJC, Borel P, Carrari F, DellaPenna D, Fraser PH, Hellmann H, Osorio S, Rothan C, Valpuesta V, Caris-Veyrat C, Fernie AR (2012) Vitamin deficiencies in humans: can plant science help? Plant Cell 24: 395-414.
-
(2012)
Plant Cell
, vol.24
, pp. 395-414
-
-
Fitzpatrick, T.B.1
Basset, G.J.C.2
Borel, P.3
Carrari, F.4
DellaPenna, D.5
Fraser, P.H.6
Hellmann, H.7
Osorio, S.8
Rothan, C.9
Valpuesta, V.10
Caris-Veyrat, C.11
Fernie, A.R.12
-
28
-
-
37249034649
-
Manipulation of phytoene levels in tomato fruit: effects on isoprenoids, plastids and intermediary metabolism
-
Fraser PD, Enfissi EM, Halket JH, Truesdale MR, Yu DM, Gerrish C, Bramley PM (2007) Manipulation of phytoene levels in tomato fruit: effects on isoprenoids, plastids and intermediary metabolism. Plant Cell 19: 3194-3211.
-
(2007)
Plant Cell
, vol.19
, pp. 3194-3211
-
-
Fraser, P.D.1
Enfissi, E.M.2
Halket, J.H.3
Truesdale, M.R.4
Yu, D.M.5
Gerrish, C.6
Bramley, P.M.7
-
29
-
-
79952334224
-
A new repeat-masking method enables specific detection of homologous sequences
-
Frith MC (2011) A new repeat-masking method enables specific detection of homologous sequences. Nucleic Acids Res 39: e23.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Frith, M.C.1
-
30
-
-
84859336922
-
Exploring tomato gene functions based on coexpression modules using graph clustering and differential coexpression approaches
-
Fukushima A, Nishizawa T, Hayakumo M, Hikosaka S, Saito K, Goto E, Kusano M (2012) Exploring tomato gene functions based on coexpression modules using graph clustering and differential coexpression approaches. Plant Physiol 158: 1487-1502.
-
(2012)
Plant Physiol
, vol.158
, pp. 1487-1502
-
-
Fukushima, A.1
Nishizawa, T.2
Hayakumo, M.3
Hikosaka, S.4
Saito, K.5
Goto, E.6
Kusano, M.7
-
31
-
-
26444516348
-
Characterization of the Arabidopsis clb6 mutant illustrates the importance of posttranscriptional regulation of the methyl-d-erythritol 4-phosphate pathway
-
Guevara-García A, San Roman C, Arroyo A, Cortes ME, De La Luz Gutierrez-Nava M, Leon P (2005) Characterization of the Arabidopsis clb6 mutant illustrates the importance of posttranscriptional regulation of the methyl-d-erythritol 4-phosphate pathway. Plant Cell 17: 628-643.
-
(2005)
Plant Cell
, vol.17
, pp. 628-643
-
-
Guevara-García, A.1
San Roman, C.2
Arroyo, A.3
Cortes, M.E.4
De La Luz Gutierrez-Nava, M.5
Leon, P.6
-
32
-
-
45449087921
-
qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data
-
Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J (2007) qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol 8: R19.
-
(2007)
Genome Biol
, vol.8
-
-
Hellemans, J.1
Mortier, G.2
De Paepe, A.3
Speleman, F.4
Vandesompele, J.5
-
33
-
-
0032918558
-
Plant cis-acting regulatory DNA elements (PLACE) database: 1999
-
Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res 27: 297-300.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 297-300
-
-
Higo, K.1
Ugawa, Y.2
Iwamoto, M.3
Korenaga, T.4
-
34
-
-
20144362242
-
Tocopherol content and activities of tyrosine aminotransferase and cystine lyase in Arabidopsis under stress conditions
-
Holländer-Czytko H, Grabowski J, Sandorf I, Weckermann K, Weiler EW (2005) Tocopherol content and activities of tyrosine aminotransferase and cystine lyase in Arabidopsis under stress conditions. J Plant Physiol 162: 767-770.
-
(2005)
J Plant Physiol
, vol.162
, pp. 767-770
-
-
Holländer-Czytko, H.1
Grabowski, J.2
Sandorf, I.3
Weckermann, K.4
Weiler, E.W.5
-
35
-
-
33745454670
-
Differential distribution of tocopherols and tocotrienols in photosynthetic and non-photosynthetic tissues
-
Horvath G, Wessjohann L, Bigirimana J, Jansen M, Guisez Y, Caubergs R, Horemans N (2006a) Differential distribution of tocopherols and tocotrienols in photosynthetic and non-photosynthetic tissues. Phytochemistry 67: 1185-1195.
-
(2006)
Phytochemistry
, vol.67
, pp. 1185-1195
-
-
Horvath, G.1
Wessjohann, L.2
Bigirimana, J.3
Jansen, M.4
Guisez, Y.5
Caubergs, R.6
Horemans, N.7
-
36
-
-
33845576611
-
Accumulation of tocopherols and tocotrienols during seed development of grape (Vitis vinifera L. cv. Albert Lavallee)
-
Horvath G, Wessjohann L, Bigirimana J, Monica H, Jansen M, Guisez Y, Caubergs R, Horemans N (2006b) Accumulation of tocopherols and tocotrienols during seed development of grape (Vitis vinifera L. cv. Albert Lavallee). Plant Physiol Biochem 44: 724-731.
-
(2006)
Plant Physiol Biochem
, vol.44
, pp. 724-731
-
-
Horvath, G.1
Wessjohann, L.2
Bigirimana, J.3
Monica, H.4
Jansen, M.5
Guisez, Y.6
Caubergs, R.7
Horemans, N.8
-
38
-
-
0036943466
-
Changes in oxidative processes and components of the antioxidant system during tomato fruit ripening
-
Jiménez A, Creissen G, Kular B, Firmin J, Robinson S, Verhoeyen M, Mullineaux P (2002) Changes in oxidative processes and components of the antioxidant system during tomato fruit ripening. Planta 214: 751-758.
-
(2002)
Planta
, vol.214
, pp. 751-758
-
-
Jiménez, A.1
Creissen, G.2
Kular, B.3
Firmin, J.4
Robinson, S.5
Verhoeyen, M.6
Mullineaux, P.7
-
39
-
-
77954587801
-
Improving the flavor of fresh fruits: genomics, biochemistry, and biotechnology
-
Klee HJ (2010) Improving the flavor of fresh fruits: genomics, biochemistry, and biotechnology. New Phytol 187: 44-56.
-
(2010)
New Phytol
, vol.187
, pp. 44-56
-
-
Klee, H.J.1
-
40
-
-
49249124363
-
Tocopherol metabolism, oxidation and recycling under high light stress in Arabidopsis
-
Kobayashi N, DellaPenna D (2008) Tocopherol metabolism, oxidation and recycling under high light stress in Arabidopsis. Plant J 55: 607-618.
-
(2008)
Plant J
, vol.55
, pp. 607-618
-
-
Kobayashi, N.1
DellaPenna, D.2
-
41
-
-
33745606024
-
Tocopherol is the scavenger of singlet oxygen produced by the triplet states of chlorophyll in the PSII reaction centre
-
Krieger-Liszkay A, Trebst A (2006) Tocopherol is the scavenger of singlet oxygen produced by the triplet states of chlorophyll in the PSII reaction centre. J Exp Bot 57: 1677-1684.
-
(2006)
J Exp Bot
, vol.57
, pp. 1677-1684
-
-
Krieger-Liszkay, A.1
Trebst, A.2
-
42
-
-
0345403931
-
A phenylalanine ammonia-lyase gene from parsley: structure, regulation and identification of elicitor and light responsive cis-acting elements
-
Lois R, Dietrich A, Hahlbrock K, Schulz W (1989) A phenylalanine ammonia-lyase gene from parsley: structure, regulation and identification of elicitor and light responsive cis-acting elements. EMBO J 8: 1641-1648.
-
(1989)
EMBO J
, vol.8
, pp. 1641-1648
-
-
Lois, R.1
Dietrich, A.2
Hahlbrock, K.3
Schulz, W.4
-
43
-
-
0342505289
-
Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-D-xylulose 5-phosphate synthase
-
Lois LM, Rodríguez-Concepción M, Gallego F, Campos N, Boronat A (2000) Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-D-xylulose 5-phosphate synthase. Plant J 22: 503-513.
-
(2000)
Plant J
, vol.22
, pp. 503-513
-
-
Lois, L.M.1
Rodríguez-Concepción, M.2
Gallego, F.3
Campos, N.4
Boronat, A.5
-
44
-
-
82955237649
-
Plastidic isoprenoid biosynthesis in tomato: physiological and molecular analysis in genotypes resistant and sensitive to drought stress
-
Loyola J, Verdugo I, González E, Casaretto JA, Ruiz-Lara S (2012) Plastidic isoprenoid biosynthesis in tomato: physiological and molecular analysis in genotypes resistant and sensitive to drought stress. Plant Biol (Stuttg) 14: 149-156.
-
(2012)
Plant Biol (Stuttg)
, vol.14
, pp. 149-156
-
-
Loyola, J.1
Verdugo, I.2
González, E.3
Casaretto, J.A.4
Ruiz-Lara, S.5
-
45
-
-
82755171866
-
Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development
-
Lytovchenko A, Eickmeier I, Pons C, Osorio S, Szecowka M, Lehmberg K, Arrivault S, Tohge T, Pineda B, Anton MT, Hedtke B, Lu Y, Fisahn J, Bock R, Stitt M, Grimm B, Granell A, Fernie AR (2011) Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development. Plant Physiol 157: 1650-1663.
-
(2011)
Plant Physiol
, vol.157
, pp. 1650-1663
-
-
Lytovchenko, A.1
Eickmeier, I.2
Pons, C.3
Osorio, S.4
Szecowka, M.5
Lehmberg, K.6
Arrivault, S.7
Tohge, T.8
Pineda, B.9
Anton, M.T.10
Hedtke, B.11
Lu, Y.12
Fisahn, J.13
Bock, R.14
Stitt, M.15
Grimm, B.16
Granell, A.17
Fernie, A.R.18
-
46
-
-
34547569191
-
STAMP: a web tool for exploring DNA-binding motif similarities
-
Mahony S, Benos PV (2007) STAMP: a web tool for exploring DNA-binding motif similarities. Nucleic Acids Res 35: 253-258.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 253-258
-
-
Mahony, S.1
Benos, P.V.2
-
47
-
-
0002475609
-
Optimum sampling strategies in genetic conservation
-
O. H. Frankel and J. G. Hawkes (Eds.), Cambridge: Cambridge University Press
-
Marshall DR, Brown AHD (1975) Optimum sampling strategies in genetic conservation. In: Frankel OH, Hawkes JG (eds) Crop genetic resources today and tomorrow. Cambridge University Press, Cambridge, pp 15-36.
-
(1975)
Crop Genetic Resources Today and Tomorrow
, pp. 15-36
-
-
Marshall, D.R.1
Brown, A.H.D.2
-
48
-
-
77954217316
-
Accumulation of health promoting phytochemicals in wild relatives of tomato and their contribution to in vitro antioxidant activity
-
Meléndez-Martínez AJ, Fraser PD, Bramley PM (2010) Accumulation of health promoting phytochemicals in wild relatives of tomato and their contribution to in vitro antioxidant activity. Phytochemistry 71: 1104-1114.
-
(2010)
Phytochemistry
, vol.71
, pp. 1104-1114
-
-
Meléndez-Martínez, A.J.1
Fraser, P.D.2
Bramley, P.M.3
-
49
-
-
77957007197
-
*omeSOM: a software for clustering and visualization of transcriptional and metabolite data mined from interspecific crosses of crop plants
-
Milone D, Stegmayer G, Kamenetzky L, Lopez M, Lee JM, Giovannoni JJ, Carrari F (2010) *omeSOM: a software for clustering and visualization of transcriptional and metabolite data mined from interspecific crosses of crop plants. BMC Bioinformatics 11: 438-447.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 438-447
-
-
Milone, D.1
Stegmayer, G.2
Kamenetzky, L.3
Lopez, M.4
Lee, J.M.5
Giovannoni, J.J.6
Carrari, F.7
-
50
-
-
40049099410
-
Tissue specialization at the metabolite level is perceived during the development of tomato fruit
-
Moco S, Capanoglu E, Tikunov Y, Bino RJ, Boyacioglu D, Hall RD, Vervoort J, De Vos CH (2007) Tissue specialization at the metabolite level is perceived during the development of tomato fruit. J Exp Bot 58: 4131-4146.
-
(2007)
J Exp Bot
, vol.58
, pp. 4131-4146
-
-
Moco, S.1
Capanoglu, E.2
Tikunov, Y.3
Bino, R.J.4
Boyacioglu, D.5
Hall, R.D.6
Vervoort, J.7
De Vos, C.H.8
-
51
-
-
0036166427
-
The function of tocopherols and tocotrienols in plants
-
Munné-Bosch S, Alegre L (2002) The function of tocopherols and tocotrienols in plants. Crit Rev Plant Sci 21: 31-57.
-
(2002)
Crit Rev Plant Sci
, vol.21
, pp. 31-57
-
-
Munné-Bosch, S.1
Alegre, L.2
-
52
-
-
78651394251
-
Simultaneous expression of Arabidopsis ρ-hydroxyphenylpyruvate dioxygenase and MPBQ methyltransferase in transgenic corn kernels triples the tocopherol content
-
Naqvi S, Farré G, Zhu C, Sandmann G, Capell T, Christou P (2010) Simultaneous expression of Arabidopsis ρ-hydroxyphenylpyruvate dioxygenase and MPBQ methyltransferase in transgenic corn kernels triples the tocopherol content. Transgenic Res 20: 177-181.
-
(2010)
Transgenic Res
, vol.20
, pp. 177-181
-
-
Naqvi, S.1
Farré, G.2
Zhu, C.3
Sandmann, G.4
Capell, T.5
Christou, P.6
-
53
-
-
0029556712
-
Genetic dissection of carotenoid synthesis in Arabidopsis defines plastoquinone as an essential component of phytoene desaturation
-
Norris SR, Barrette TR, DellaPenna D (1995) Genetic dissection of carotenoid synthesis in Arabidopsis defines plastoquinone as an essential component of phytoene desaturation. Plant Cell 7: 2139-2149.
-
(1995)
Plant Cell
, vol.7
, pp. 2139-2149
-
-
Norris, S.R.1
Barrette, T.R.2
DellaPenna, D.3
-
54
-
-
77957310003
-
The isogene 1-deoxy-D-xylulose 5-phosphate synthase II controls isoprenoid profiles, precursor pathway allocation and density of tomato trichomes
-
ssq032v1-ssq032
-
Paetzold H, Garms S, Bartram S, Wieczorek J, Uros-Gracia EM, Rodriguez-Concepción M, Boland W, Strack D, Hause B, Walter MH (2010) The isogene 1-deoxy-D-xylulose 5-phosphate synthase II controls isoprenoid profiles, precursor pathway allocation and density of tomato trichomes. Molecular Plant ssq032v1-ssq032.
-
(2010)
Molecular Plant
-
-
Paetzold, H.1
Garms, S.2
Bartram, S.3
Wieczorek, J.4
Uros-Gracia, E.M.5
Rodriguez-Concepción, M.6
Boland, W.7
Strack, D.8
Hause, B.9
Walter, M.H.10
-
55
-
-
43749099620
-
Using Weeder for the discovery of conserved transcription factor binding sites
-
Pavesi G, Pesole G (2006) Using Weeder for the discovery of conserved transcription factor binding sites. Curr Protoc Bioinformatics Chapter 2: Unit 2. 11.
-
(2006)
Curr Protoc Bioinformatics Chapter 2: Unit 2
, pp. 11
-
-
Pavesi, G.1
Pesole, G.2
-
56
-
-
0036581160
-
Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR
-
Pfaffl MW, Horgan GW, Dempfle L (2002) Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res 30: e36.
-
(2002)
Nucleic Acids Res
, vol.30
-
-
Pfaffl, M.W.1
Horgan, G.W.2
Dempfle, L.3
-
57
-
-
1842483281
-
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations
-
Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP (2004) Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations. Biotechnol Lett 26: 509-515.
-
(2004)
Biotechnol Lett
, vol.26
, pp. 509-515
-
-
Pfaffl, M.W.1
Tichopad, A.2
Prgomet, C.3
Neuvians, T.P.4
-
58
-
-
33847284023
-
Cloning and expression of the gene encoding solanesyl diphosphate synthase from Hevea brasiliensis
-
Phatthiyaa A, Takahashib S, Chareonthiphakornc N, Koyamab T, Wititsuwannakuld D, Wititsuwannakul R (2007) Cloning and expression of the gene encoding solanesyl diphosphate synthase from Hevea brasiliensis. Plant Sci 4: 824-831.
-
(2007)
Plant Sci
, vol.4
, pp. 824-831
-
-
Phatthiyaa, A.1
Takahashib, S.2
Chareonthiphakornc, N.3
Koyamab, T.4
Wititsuwannakuld, D.5
Wititsuwannakul, R.6
-
59
-
-
79960013658
-
Coupling virus induced gene silencing to exogenous green fluorescence protein expression provides a highly efficient system for functional genomics, in Arabidopsis and across all stages of tomato fruit development
-
Quadrana L, Rodriguez MC, Lopez M, Bermudez L, Nunes-Nesi A, Fernie AR, Descalzo A, Asis R, Rossi MM, Asurmendi S, Carrari F (2011) Coupling virus induced gene silencing to exogenous green fluorescence protein expression provides a highly efficient system for functional genomics, in Arabidopsis and across all stages of tomato fruit development. Plant Physiol 56: 1278-1291.
-
(2011)
Plant Physiol
, vol.56
, pp. 1278-1291
-
-
Quadrana, L.1
Rodriguez, M.C.2
Lopez, M.3
Bermudez, L.4
Nunes-Nesi, A.5
Fernie, A.R.6
Descalzo, A.7
Asis, R.8
Rossi, M.M.9
Asurmendi, S.10
Carrari, F.11
-
60
-
-
0032725627
-
Transgene-mediated and elicitor-induced perturbation of metabolic channeling at the entry point into the phenylpropanoid pathway
-
Rasmussen S, Dixon RA (1999) Transgene-mediated and elicitor-induced perturbation of metabolic channeling at the entry point into the phenylpropanoid pathway. Plant Cell 11: 1537-1551.
-
(1999)
Plant Cell
, vol.11
, pp. 1537-1551
-
-
Rasmussen, S.1
Dixon, R.A.2
-
61
-
-
84865466282
-
A tyrosine aminotransferase involved in tocopherol synthesis in Arabidopsis
-
doi:10.1111/j.1365-313X.2012.05035.x
-
Riewe D, Koohi M, Lisec J, Pfeiffer M, Lippmann R, Schmeichel J, Willmitzer L, Altmann T (2012) A tyrosine aminotransferase involved in tocopherol synthesis in Arabidopsis. Plant J. doi: 10. 1111/j. 1365-313X. 2012. 05035. x.
-
(2012)
Plant J
-
-
Riewe, D.1
Koohi, M.2
Lisec, J.3
Pfeiffer, M.4
Lippmann, R.5
Schmeichel, J.6
Willmitzer, L.7
Altmann, T.8
-
62
-
-
0842285692
-
Engineering plant shikimate pathway for production of tocotrienol and improving herbicide resistance
-
Rippert P, Scimemi C, Dubald M, Matringe M (2004) Engineering plant shikimate pathway for production of tocotrienol and improving herbicide resistance. Plant Physiol 134: 92-100.
-
(2004)
Plant Physiol
, vol.134
, pp. 92-100
-
-
Rippert, P.1
Scimemi, C.2
Dubald, M.3
Matringe, M.4
-
63
-
-
70350480811
-
Phytoene synthase activity controls the biosynthesis of carotenoids and the supply of their metabolic precursors in dark-grown Arabidopsis seedlings
-
Rodríguez-Villalón A, Gas E, Rodriguez-Concepcion M (2009) Phytoene synthase activity controls the biosynthesis of carotenoids and the supply of their metabolic precursors in dark-grown Arabidopsis seedlings. Plant J 60: 424-435.
-
(2009)
Plant J
, vol.60
, pp. 424-435
-
-
Rodríguez-Villalón, A.1
Gas, E.2
Rodriguez-Concepcion, M.3
-
64
-
-
0034718562
-
An alternative pathway to ß-carotene formation in plant chromoplasts discovered by map-based cloning of Beta and old-gold color mutations in tomato
-
Ronen G, Carmel-Goren L, Zamir D, Hirschberg J (2000) An alternative pathway to ß-carotene formation in plant chromoplasts discovered by map-based cloning of Beta and old-gold color mutations in tomato. Proc Natl Acad Sci USA 97: 11102-11107.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 11102-11107
-
-
Ronen, G.1
Carmel-Goren, L.2
Zamir, D.3
Hirschberg, J.4
-
65
-
-
4544265213
-
Tackling the plant proteome: practical approaches, hurdles and experimental tools
-
Rose JKC, Bashir S, Giovannoni JJ, Jahn MM, Saravanan RS (2004) Tackling the plant proteome: practical approaches, hurdles and experimental tools. Plant J 39: 715-733.
-
(2004)
Plant J
, vol.39
, pp. 715-733
-
-
Rose, J.K.C.1
Bashir, S.2
Giovannoni, J.J.3
Jahn, M.M.4
Saravanan, R.S.5
-
66
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen S, Skaletsky H (2000) Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol 132: 365-386.
-
(2000)
Methods Mol Biol
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
67
-
-
64549150047
-
Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data
-
Ruijter JM, Ramakers C, Hoogaars WM, Karlen Y, Bakker O, van den Hoff MJ, Moorman AF (2009) Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data. Nucleic Acids Res 37: e45.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Ruijter, J.M.1
Ramakers, C.2
Hoogaars, W.M.3
Karlen, Y.4
Bakker, O.5
van den Hoff, M.J.6
Moorman, A.F.7
-
68
-
-
0027979217
-
A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes
-
Sablowski RW, Moyano E, Culianez-Macia FA, Schuch W, Martin C, Bevan M (1994) A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes. EMBO J 13: 128-137.
-
(1994)
EMBO J
, vol.13
, pp. 128-137
-
-
Sablowski, R.W.1
Moyano, E.2
Culianez-Macia, F.A.3
Schuch, W.4
Martin, C.5
Bevan, M.6
-
69
-
-
33748802545
-
Characterization of homogentisate prenyltransferases involved in plastoquinone-9 and tocochromanol biosynthesis
-
Sadre R, Gruber J, Frentzen M (2006) Characterization of homogentisate prenyltransferases involved in plastoquinone-9 and tocochromanol biosynthesis. FEBS Lett 580: 5357-5362.
-
(2006)
FEBS Lett
, vol.580
, pp. 5357-5362
-
-
Sadre, R.1
Gruber, J.2
Frentzen, M.3
-
70
-
-
2942672961
-
Vitamin E is essential for seed longevity and for preventing lipid peroxidation during germination
-
Sattler SE, Gilliland LU, Magallanes-Lundback M, Pollard M, DellaPenna D (2004) Vitamin E is essential for seed longevity and for preventing lipid peroxidation during germination. Plant Cell 16: 1419-1432.
-
(2004)
Plant Cell
, vol.16
, pp. 1419-1432
-
-
Sattler, S.E.1
Gilliland, L.U.2
Magallanes-Lundback, M.3
Pollard, M.4
DellaPenna, D.5
-
71
-
-
66449128543
-
Pheophytin pheophorbide hydrolase (pheophytinase) is involved in chlorophyll breakdown during leaf senescence in Arabidopsis
-
Schelbert S, Aubry S, Burla B, Agne B, Kessler F, Krupinska K, Hörtensteiner S (2009) Pheophytin pheophorbide hydrolase (pheophytinase) is involved in chlorophyll breakdown during leaf senescence in Arabidopsis. Plant Cell 21: 767-785.
-
(2009)
Plant Cell
, vol.21
, pp. 767-785
-
-
Schelbert, S.1
Aubry, S.2
Burla, B.3
Agne, B.4
Kessler, F.5
Krupinska, K.6
Hörtensteiner, S.7
-
72
-
-
79952189491
-
Ectopic expression of apple fruit homogentisate phytyltransferase gene (MdHPT1) increases tocopherol in transgenic tomato (Solanum lycopersicum cv. Micro-Tom) leaves and fruits
-
Seo YS, Kim SJ, Harn CH, Kim WT (2011) Ectopic expression of apple fruit homogentisate phytyltransferase gene (MdHPT1) increases tocopherol in transgenic tomato (Solanum lycopersicum cv. Micro-Tom) leaves and fruits. Phytochemistry 72: 321-329.
-
(2011)
Phytochemistry
, vol.72
, pp. 321-329
-
-
Seo, Y.S.1
Kim, S.J.2
Harn, C.H.3
Kim, W.T.4
-
73
-
-
0242490780
-
Cytoscape: a software environment for integrated models of biomolecular interaction networks
-
Shannon P, Markiel A, Ozier O, Baliga NS, Wang JT, Ramage D, Amin N, Schwikowski B, Ideker T (2003) Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 13: 2498-2504.
-
(2003)
Genome Res
, vol.13
, pp. 2498-2504
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.S.4
Wang, J.T.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
-
74
-
-
0029257141
-
Functional dissection of an abscisic acid(ABA)-inducible gene reveals two independent ABA-responsive complexes each containing a G-box and a novel cis-acting element
-
Shen Q, Ho TH (1995) Functional dissection of an abscisic acid(ABA)-inducible gene reveals two independent ABA-responsive complexes each containing a G-box and a novel cis-acting element. Plant Cell 7: 295-307.
-
(1995)
Plant Cell
, vol.7
, pp. 295-307
-
-
Shen, Q.1
Ho, T.H.2
-
75
-
-
79960264839
-
Activation of ethylene-responsive p-hydroxyphenylpyruvate dioxygenase leads to increased tocopherol levels during ripening in mango
-
Singh RK, Ali SA, Nath P, Sane VA (2011) Activation of ethylene-responsive p-hydroxyphenylpyruvate dioxygenase leads to increased tocopherol levels during ripening in mango. J Exp Bot 62: 3375-3385.
-
(2011)
J Exp Bot
, vol.62
, pp. 3375-3385
-
-
Singh, R.K.1
Ali, S.A.2
Nath, P.3
Sane, V.A.4
-
76
-
-
77950580571
-
Structural rules and complex regulatory circuitry constrain expression of a notch- and EGFR-regulated eye enhancer
-
Swanson CI, Evans NC, Barolo S (2010) Structural rules and complex regulatory circuitry constrain expression of a notch- and EGFR-regulated eye enhancer. Dev Cell 18: 359-370.
-
(2010)
Dev Cell
, vol.18
, pp. 359-370
-
-
Swanson, C.I.1
Evans, N.C.2
Barolo, S.3
-
77
-
-
78650964757
-
Photoprotection in plants: a new light on photosystem II damage
-
Takahashi S, Badger MR (2011) Photoprotection in plants: a new light on photosystem II damage. Trends Plant Sci 16: 53-60.
-
(2011)
Trends Plant Sci
, vol.16
, pp. 53-60
-
-
Takahashi, S.1
Badger, M.R.2
-
78
-
-
0036676186
-
Assignment of UVB-responsive cis-element and protoplastization-(dilution-) and elicitor-responsive ones in the promoter region of a carrot phenylalanine ammonia-lyase Gene (gDcPAL1)
-
Takeda J, It Y, Maeda K, Ozeki Y (2002) Assignment of UVB-responsive cis-element and protoplastization-(dilution-) and elicitor-responsive ones in the promoter region of a carrot phenylalanine ammonia-lyase Gene (gDcPAL1). Photochem Photobiol 76: 232-238.
-
(2002)
Photochem Photobiol
, vol.76
, pp. 232-238
-
-
Takeda, J.1
It, Y.2
Maeda, K.3
Ozeki, Y.4
-
79
-
-
29144442902
-
Alignments anchored on genomic landmarks can aid in the identification of regulatory elements
-
Tharakaraman K, Mariño-Ramírez L, Sheetlin S, Landsman D, Spouge JL (2005) Alignments anchored on genomic landmarks can aid in the identification of regulatory elements. Bioinformatics 21(Suppl 1): i440-i448.
-
(2005)
Bioinformatics
, vol.21
, Issue.SUPPL. 1
-
-
Tharakaraman, K.1
Mariño-Ramírez, L.2
Sheetlin, S.3
Landsman, D.4
Spouge, J.L.5
-
80
-
-
79960422847
-
Genome sequence and analysis of the tuber crop potato
-
The Potato Genome Sequencing Consortium
-
The Potato Genome Sequencing Consortium (2011) Genome sequence and analysis of the tuber crop potato. Nature 475: 189-197.
-
(2011)
Nature
, vol.475
, pp. 189-197
-
-
-
81
-
-
84863693752
-
The tomato genome sequence provides insights into fleshy fruit evolution
-
The Tomato Genome Consortium
-
The Tomato Genome Consortium (2012) The tomato genome sequence provides insights into fleshy fruit evolution. Nature 485: 635-641.
-
(2012)
Nature
, vol.485
, pp. 635-641
-
-
-
82
-
-
0036191009
-
INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling
-
Thijs G, Moreau Y, De Smet F, Mathys J, Lescot M, Rombauts S, Rouze P, De Moor B, Marchal K (2002) INCLUSive: integrated clustering, upstream sequence retrieval and motif sampling. Bioinformatics 18: 331-332.
-
(2002)
Bioinformatics
, vol.18
, pp. 331-332
-
-
Thijs, G.1
Moreau, Y.2
De Smet, F.3
Mathys, J.4
Lescot, M.5
Rombauts, S.6
Rouze, P.7
De Moor, B.8
Marchal, K.9
-
83
-
-
34548020261
-
The pds2 mutation is a lesion in the Arabidopsis homogentisate solanesyltransferase gene involved in plastoquinone biosynthesis
-
Tian L, DellaPenna D, Dixon RA (2007) The pds2 mutation is a lesion in the Arabidopsis homogentisate solanesyltransferase gene involved in plastoquinone biosynthesis. Planta 226: 1067-1073.
-
(2007)
Planta
, vol.226
, pp. 1067-1073
-
-
Tian, L.1
DellaPenna, D.2
Dixon, R.A.3
-
84
-
-
0029798873
-
Vitamin E in humans: demand and delivery
-
Traber MG, Sies H (1996) Vitamin E in humans: demand and delivery. Annual Rev Nut 16: 321-347.
-
(1996)
Annual Rev Nut
, vol.16
, pp. 321-347
-
-
Traber, M.G.1
Sies, H.2
-
85
-
-
84858751046
-
Expression of a bacterial feedback-insensitive 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase of the shikimate pathway in Arabidopsis elucidates potential metabolic bottlenecks between primary and secondary metabolism
-
Tzin V, Malitsky S, Zvi MMB, Bedair M, Sumner L, Aharoni A, Galili G (2012) Expression of a bacterial feedback-insensitive 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase of the shikimate pathway in Arabidopsis elucidates potential metabolic bottlenecks between primary and secondary metabolism. New Phytol 194: 301-598.
-
(2012)
New Phytol
, vol.194
, pp. 301-598
-
-
Tzin, V.1
Malitsky, S.2
Zvi, M.M.B.3
Bedair, M.4
Sumner, L.5
Aharoni, A.6
Galili, G.7
-
86
-
-
33645735298
-
The Arabidopsis vitamin E pathway gene5-1 mutant reveals a critical role for phytol kinase in seed tocopherol biosynthesis
-
Valentin HE, Lincoln K, Moshiri F, Jensen PK, Qi Q, Venkatesh TV, Karunanandaa B, Baszis SR, Norris SR, Savidge B, Gruys KJ, Last RL (2006) The Arabidopsis vitamin E pathway gene5-1 mutant reveals a critical role for phytol kinase in seed tocopherol biosynthesis. Plant Cell 18: 212-224.
-
(2006)
Plant Cell
, vol.18
, pp. 212-224
-
-
Valentin, H.E.1
Lincoln, K.2
Moshiri, F.3
Jensen, P.K.4
Qi, Q.5
Venkatesh, T.V.6
Karunanandaa, B.7
Baszis, S.R.8
Norris, S.R.9
Savidge, B.10
Gruys, K.J.11
Last, R.L.12
-
87
-
-
78651453850
-
GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments
-
van Heeringen SJ, Veenstra GJ (2011) GimmeMotifs: a de novo motif prediction pipeline for ChIP-sequencing experiments. Bioinformatics 27: 270-271.
-
(2011)
Bioinformatics
, vol.27
, pp. 270-271
-
-
van Heeringen, S.J.1
Veenstra, G.J.2
-
88
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
RESEARCH0034
-
Vandesompele J, De Preter K, Pattyn F, Poppe B, van Roy N, De Paepe A, Speleman F (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3. RESEARCH0034.
-
(2002)
Genome Biol
, pp. 3
-
-
Vandesompele, J.1
de Preter, K.2
Pattyn, F.3
Poppe, B.4
van Roy, N.5
de Paepe, A.6
Speleman, F.7
-
89
-
-
84859126293
-
Structure and dynamics of the isoprenoid pathway network
-
Vranová E, Coman D, Gruissem W (2012) Structure and dynamics of the isoprenoid pathway network. Molecular Plant 5: 318-333.
-
(2012)
Molecular Plant
, vol.5
, pp. 318-333
-
-
Vranová, E.1
Coman, D.2
Gruissem, W.3
-
90
-
-
0027292299
-
Phenetic relationships and levels of variability detected by restriction fragment length polymorphism and random amplified polymorphic DNA analysis of cultivated and wild accessions of Lycopersicon esculentum
-
Williams CE, St. Clair DA (1993) Phenetic relationships and levels of variability detected by restriction fragment length polymorphism and random amplified polymorphic DNA analysis of cultivated and wild accessions of Lycopersicon esculentum. Genome 36: 619-630.
-
(1993)
Genome
, vol.36
, pp. 619-630
-
-
Williams, C.E.1
St. Clair, D.A.2
-
91
-
-
0034979805
-
Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology
-
Winkel-Shirley B (2001) Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology. Plant Physiol 126: 485-493.
-
(2001)
Plant Physiol
, vol.126
, pp. 485-493
-
-
Winkel-Shirley, B.1
-
92
-
-
0001221305
-
Variation in cereals from the Himalayas and the optimum strategy for sampling germplasm
-
Witcombe JR, Gilani MM (1979) Variation in cereals from the Himalayas and the optimum strategy for sampling germplasm. J Appl Ecol 16: 633-640.
-
(1979)
J Appl Ecol
, vol.16
, pp. 633-640
-
-
Witcombe, J.R.1
Gilani, M.M.2
-
93
-
-
83855163414
-
Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence
-
Wittkopp PJ, Kalay G (2012) Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence. Nat Rev Genet 13: 59-69.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 59-69
-
-
Wittkopp, P.J.1
Kalay, G.2
-
94
-
-
0000672617
-
Sink metabolism in tomato fruit. IV. Genetic and biochemical analysis of sucrose accumulation
-
Yelle S, Chetelat RT, Dorais M, Deverna JW, Bennett AB (1991) Sink metabolism in tomato fruit. IV. Genetic and biochemical analysis of sucrose accumulation. Plant Physiol 95: 1026-1035.
-
(1991)
Plant Physiol
, vol.95
, pp. 1026-1035
-
-
Yelle, S.1
Chetelat, R.T.2
Dorais, M.3
Deverna, J.W.4
Bennett, A.B.5
-
95
-
-
78651339097
-
AGRIS: the Arabidopsis Gene Regulatory Information Server, an update
-
Yilmaz A, Mejia-Guerra MK, Kurz K, Liang X, Welch L, Grotewold E (2011) AGRIS: the Arabidopsis Gene Regulatory Information Server, an update. Nucleic Acids Res 39 (database issue).
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.Database issue
-
-
Yilmaz, A.1
Mejia-Guerra, M.K.2
Kurz, K.3
Liang, X.4
Welch, L.5
Grotewold, E.6
-
96
-
-
73849139031
-
Intersection of the tocopherol and plastoquinol metabolic pathways at the plastoglobule
-
Zbierzak AM, Kanwischer M, Wille C, Vidi PA, Giavalisco P, Lohmann A, Briesen I, Porfirova S, Bréhélin C, Kessler F, Dörmann P (2009) Intersection of the tocopherol and plastoquinol metabolic pathways at the plastoglobule. Biochem J 425: 389-399.
-
(2009)
Biochem J
, vol.425
, pp. 389-399
-
-
Zbierzak, A.M.1
Kanwischer, M.2
Wille, C.3
Vidi, P.A.4
Giavalisco, P.5
Lohmann, A.6
Briesen, I.7
Porfirova, S.8
Bréhélin, C.9
Kessler, F.10
Dörmann, P.11
-
97
-
-
23944458138
-
A general framework for weighted gene co-expression network analysis
-
Article 17
-
Zhang B, Horvath S (2005) A general framework for weighted gene co-expression network analysis. Stat Appl Genet Mol Biol 4. Article 17.
-
(2005)
Stat Appl Genet Mol Biol
, vol.4
-
-
Zhang, B.1
Horvath, S.2
|