-
1
-
-
79959771257
-
Protein-ligand docking
-
Bottegoni, G. Protein-ligand docking. Front. Biosci. 2012, 17, 2289-2306.
-
(2012)
Front. Biosci.
, vol.17
, pp. 2289-2306
-
-
Bottegoni, G.1
-
2
-
-
8844263008
-
Docking and scoring in virtual screening for drug discovery: Methods and applications
-
Kitchen, D.B.; Decornez, H.; Furr, J.R.; Bajorath, J. Docking and scoring in virtual screening for drug discovery: Methods and applications. Nat. Rev. Drug Discov. 2004, 3, 935-949.
-
(2004)
Nat. Rev. Drug Discov.
, vol.3
, pp. 935-949
-
-
Kitchen, D.B.1
Decornez, H.2
Furr, J.R.3
Bajorath, J.4
-
3
-
-
69549112280
-
A practical overview of Quantitative Structure-Activity Relationship
-
Nantasenamat, C.; Isarankura-Na-Ayudhya, C.; Naenna, T.; Prachayasittikul, V. A practical overview of Quantitative Structure-Activity Relationship. EXCLI Journal 2009, 8, 74-88.
-
(2009)
EXCLI Journal
, vol.8
, pp. 74-88
-
-
Nantasenamat, C.1
Isarankura-Na-Ayudhya, C.2
Naenna, T.3
Prachayasittikul, V.4
-
4
-
-
77949342214
-
3D-QSAR in drug design-A review
-
Verma, J.; Khedkar, V.M.; Coutinho, E.C. 3D-QSAR in drug design-A review. Curr. Top. Med. Chem. 2010, 10, 95-115.
-
(2010)
Curr. Top. Med. Chem.
, vol.10
, pp. 95-115
-
-
Verma, J.1
Khedkar, V.M.2
Coutinho, E.C.3
-
5
-
-
0036725277
-
Molecular dynamics simulations of biomolecules
-
Karplus, M.; McCammon, J.A. Molecular dynamics simulations of biomolecules. Nat. Struct. Biol. 2002, 9, 646-652.
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 646-652
-
-
Karplus, M.1
McCammon, J.A.2
-
6
-
-
0033654654
-
Molecular dynamics simulation of nucleic acids
-
Cheatham, T.E.; Kollman, P.A. Molecular dynamics simulation of nucleic acids. Annu. Rev. Phys. Chem. 2000, 51, 435-471.
-
(2000)
Annu. Rev. Phys. Chem.
, vol.51
, pp. 435-471
-
-
Cheatham, T.E.1
Kollman, P.A.2
-
7
-
-
33747200808
-
Combining docking and molecular dynamic simulations in drug design
-
Alonso, H.; Bliznyuk, A.A.; Gready, J.E. Combining docking and molecular dynamic simulations in drug design. Med. Res. Rev. 2006, 26, 531-568.
-
(2006)
Med. Res. Rev.
, vol.26
, pp. 531-568
-
-
Alonso, H.1
Bliznyuk, A.A.2
Gready, J.E.3
-
9
-
-
32544450674
-
Structural mechanism of plant aquaporin gating
-
Törnroth-Horsefield, S.; Wang, Y.; Hedfalk, K.; Johanson, U.; Karlsson, M.; Tajkhorshid, E.; Neutze, R.; Kjellbom, P. Structural mechanism of plant aquaporin gating. Nature 2006, 439, 688-694.
-
(2006)
Nature
, vol.439
, pp. 688-694
-
-
Törnroth-Horsefield, S.1
Wang, Y.2
Hedfalk, K.3
Johanson, U.4
Karlsson, M.5
Tajkhorshid, E.6
Neutze, R.7
Kjellbom, P.8
-
10
-
-
8844228899
-
Not ions alone: Barriers to ion permeation in nanopores and channels
-
Beckstein, O.; Tai, K.; Sansom, M.S. Not ions alone: Barriers to ion permeation in nanopores and channels. J. Am. Chem. Soc. 2007, 126, 14694-14695.
-
(2007)
J. Am. Chem. Soc.
, vol.126
, pp. 14694-14695
-
-
Beckstein, O.1
Tai, K.2
Sansom, M.S.3
-
12
-
-
50149103756
-
Synergies of virtual screening approaches
-
Muegge, I. Synergies of virtual screening approaches. Mini Rev. Med. Chem. 2008, 8, 927-933.
-
(2008)
Mini Rev. Med. Chem.
, vol.8
, pp. 927-933
-
-
Muegge, I.1
-
13
-
-
53349142711
-
Enhancing drug discovery through in silico screening: Strategies to increase true positives retrieval rates
-
Kirchmair, J.; Distinto, S.; Schuster, D.; Spitzer, G.; Langer, T.; Wolber, G. Enhancing drug discovery through in silico screening: Strategies to increase true positives retrieval rates. Curr. Med. Chem. 2008, 15, 2040-2053.
-
(2008)
Curr. Med. Chem.
, vol.15
, pp. 2040-2053
-
-
Kirchmair, J.1
Distinto, S.2
Schuster, D.3
Spitzer, G.4
Langer, T.5
Wolber, G.6
-
14
-
-
84872184691
-
-
Available online, (accessed on 12 December 2012)
-
Schrödinger Suite. Available online: http://www.schrodinger.com (accessed on 12 December 2012).
-
Schrödinger Suite
-
-
-
15
-
-
77956334858
-
-
Available online, (accessed on 12 December 2012)
-
Accelrys Discovery Studio. Available online: http://accelrys.com/products/discovery-studio (accessed on 12 December 2012).
-
Accelrys Discovery Studio
-
-
-
16
-
-
84872177473
-
-
Available online, (accessed on 12 December 2012)
-
SYBYL-X Suite. Available online: http://tripos.com (accessed on 12 December 2012).
-
SYBYL-X Suite
-
-
-
17
-
-
84855757480
-
-
Available online, (accessed on 12 December 2012)
-
Molecular Operating Environment. Available online: http://www.chemcomp.com (accessed on 12 December 2012).
-
Molecular Operating Environment
-
-
-
18
-
-
11644261806
-
Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function
-
Morris, G.M.; Goodsell, D.S.; Halliday, R.S.; Huey, R.; Hart, W.E.; Belew, R.K.; Olson, A.J. Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function. J. Comput. Chem. 1998, 19, 1639-1662.
-
(1998)
J. Comput. Chem.
, vol.19
, pp. 1639-1662
-
-
Morris, G.M.1
Goodsell, D.S.2
Halliday, R.S.3
Huey, R.4
Hart, W.E.5
Belew, R.K.6
Olson, A.J.7
-
19
-
-
0037161586
-
5D-QSAR: The key for simulating induced fit?
-
Vedani, A.; Dobler, M. 5D-QSAR: The key for simulating induced fit? J. Med. Chem. 2002, 45, 2139-2149.
-
(2002)
J. Med. Chem.
, vol.45
, pp. 2139-2149
-
-
Vedani, A.1
Dobler, M.2
-
20
-
-
34548283148
-
Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters
-
In, Tampa, FL, USA, 11-17 November
-
Bowers, K.J.; Chow, E.; Xu, H.; Dror, R.O.; Eastwood, M.P.; Gregersen, B.A.; Klepeis, J.L.; Kolossvary, I.; Moraes, M.A.; Sacerdoti, F.D.; et al. Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters. In Proceedings of the ACM/IEEE Conference on Supercomputing (SC06), Tampa, FL, USA, 11-17 November 2006.
-
(2006)
Proceedings of the ACM/IEEE Conference on Supercomputing (SC06)
-
-
Bowers, K.J.1
Chow, E.2
Xu, H.3
Dror, R.O.4
Eastwood, M.P.5
Gregersen, B.A.6
Klepeis, J.L.7
Kolossvary, I.8
Moraes, M.A.9
Sacerdoti, F.D.10
-
21
-
-
70349211752
-
Automated docking screens: A feasibility study
-
Irwin, J.J.; Shoichet, B.K.; Mysinger, M.M.; Huang, N.; Colizzi, F.; Wassam, P.; Cao, Y. Automated docking screens: A feasibility study. J. Med. Chem. 2009, 52, 5712-5720.
-
(2009)
J. Med. Chem.
, vol.52
, pp. 5712-5720
-
-
Irwin, J.J.1
Shoichet, B.K.2
Mysinger, M.M.3
Huang, N.4
Colizzi, F.5
Wassam, P.6
Cao, Y.7
-
22
-
-
78650336427
-
FimH Antagonists for the oral treatment of urinary tract infections: From design and synthesis to in vitro and in vivo evaluation
-
Klein, T.; Abgottspon, D.; Wittwer, M.; Rabbani, S.; Herold, J.; Jiang, X.; Kleeb, S.; Luthi, C.; Scharenberg M.; Bezencon, J.; et al. FimH Antagonists for the oral treatment of urinary tract infections: From design and synthesis to in vitro and in vivo evaluation. J. Med. Chem. 2010, 53, 8627-8641.
-
(2010)
J. Med. Chem.
, vol.53
, pp. 8627-8641
-
-
Klein, T.1
Abgottspon, D.2
Wittwer, M.3
Rabbani, S.4
Herold, J.5
Jiang, X.6
Kleeb, S.7
Luthi, C.8
Scharenberg, M.9
Bezencon, J.10
-
23
-
-
80054965083
-
Design, synthesis and biological evaluation of mannosyl triazoles as FimH antagonists
-
Schwardt, O.; Rabbani, S.; Hartmann, M.; Abgottspon, D.; Wittwer, M.; Kleeb, S.; Zalewski, A.; Smieško, M.; Cutting, B.; Ernst, B. Design, synthesis and biological evaluation of mannosyl triazoles as FimH antagonists. Bioorg. Med. Chem. 2011, 19, 6454-6473.
-
(2011)
Bioorg. Med. Chem.
, vol.19
, pp. 6454-6473
-
-
Schwardt, O.1
Rabbani, S.2
Hartmann, M.3
Abgottspon, D.4
Wittwer, M.5
Kleeb, S.6
Zalewski, A.7
Smieško, M.8
Cutting, B.9
Ernst, B.10
-
24
-
-
84861499906
-
Antiadhesion therapy for urinary tract infections-A balanced PK/PD profile proved to be key for success
-
Jiang, X.; Abgottspon, D.; Kleeb, S.; Rabbani, S.; Scharenberg, M.; Wittwer, M.; Haug, M.; Schwardt, O.; Ernst, B. Antiadhesion therapy for urinary tract infections-A balanced PK/PD profile proved to be key for success. J. Med. Chem. 2012, 55, 4700-4713.
-
(2012)
J. Med. Chem.
, vol.55
, pp. 4700-4713
-
-
Jiang, X.1
Abgottspon, D.2
Kleeb, S.3
Rabbani, S.4
Scharenberg, M.5
Wittwer, M.6
Haug, M.7
Schwardt, O.8
Ernst, B.9
-
25
-
-
84857034198
-
-
Schrödinger, LLC: New York, NY, USA
-
QikProp, version 3.4; Schrödinger, LLC: New York, NY, USA, 2011.
-
(2011)
QikProp, version 3.4
-
-
-
26
-
-
84860999989
-
VirtualToxLab-A platform for estimating the toxic potential of drugs, chemicals and natural products
-
Vedani, A.; Dobler, M.; Smieško, M. VirtualToxLab-A platform for estimating the toxic potential of drugs, chemicals and natural products. Toxicol. Appl. Pharmacol. 2012, 261, 142-153.
-
(2012)
Toxicol. Appl. Pharmacol.
, vol.261
, pp. 142-153
-
-
Vedani, A.1
Dobler, M.2
Smieško, M.3
-
27
-
-
84872201442
-
-
Available online, (accessed on 12 December 2012)
-
VirtualToxLab Online Documentation. Available online: http://www.biograf.ch/downloads/VirtualToxLab.pdf (accessed on 12 December 2012).
-
VirtualToxLab Online Documentation
-
-
-
28
-
-
84857070934
-
-
Schrödinger, LLC: New York, NY, USA
-
MacroModel, version 9.9; Schrödinger, LLC: New York, NY, USA, 2011.
-
(2011)
MacroModel, version 9.9
-
-
-
29
-
-
0029248338
-
Class IV charge models: A new semiempirical approach in quantum chemistry
-
Storer, J.W.; Giesen, D.J.; Cramer, C.J.; Truhlar, D.G. Class IV charge models: A new semiempirical approach in quantum chemistry. J. Comput. Aided Mol. Des. 1995, 9, 87-110.
-
(1995)
J. Comput. Aided Mol. Des.
, vol.9
, pp. 87-110
-
-
Storer, J.W.1
Giesen, D.J.2
Cramer, C.J.3
Truhlar, D.G.4
-
30
-
-
84872184655
-
-
Schrödinger, LLC: New York, NY, USA
-
ConfGen, version 2.1; Schrödinger, LLC: New York, NY, USA, 2009.
-
(2009)
ConfGen, version 2.1
-
-
-
31
-
-
84872184697
-
-
Basel, Switzerland. Personal communication
-
Smieško, M. University of Basel, Basel, Switzerland. Personal communication, 2012.
-
(2012)
University of Basel
-
-
Smieško, M.1
-
32
-
-
78651478620
-
Probing small-molecule binding to cytochrome P450 2D6 and 2C9: An in silico protocol for generating toxicity alerts
-
Rossato, G.; Ernst, B.; Smiesko, M.; Spreafico, M.; Vedani, A. Probing small-molecule binding to cytochrome P450 2D6 and 2C9: An in silico protocol for generating toxicity alerts. ChemMedChem 2010, 5, 2088-2101.
-
(2010)
ChemMedChem
, vol.5
, pp. 2088-2101
-
-
Rossato, G.1
Ernst, B.2
Smiesko, M.3
Spreafico, M.4
Vedani, A.5
-
33
-
-
77953765576
-
Structure-based drug design and optimization of mannoside bacterial FimH antagonists
-
Han, Z.; Pinkner, J.S.; Ford, B.; Obermann, R.; Nolan, W.; Wildman, S.A.; Hobbs, D.; Ellenberger, T.; Cusumano, C.K.; Hultgren, S.J.; et al. Structure-based drug design and optimization of mannoside bacterial FimH antagonists. J. Med. Chem. 2010, 53, 4779-4792.
-
(2010)
J. Med. Chem.
, vol.53
, pp. 4779-4792
-
-
Han, Z.1
Pinkner, J.S.2
Ford, B.3
Obermann, R.4
Nolan, W.5
Wildman, S.A.6
Hobbs, D.7
Ellenberger, T.8
Cusumano, C.K.9
Hultgren, S.J.10
-
34
-
-
80054956766
-
-
Schrödinger, LLC: New York, NY, USA
-
Maestro, version 9.2; Schrödinger, LLC: New York, NY, USA, 2011.
-
(2011)
Maestro, version 9.2
-
-
-
35
-
-
20144371130
-
Combining protein modeling and 6D-QSAR. Simulating the binding of structurally diverse ligands to the estrogen receptor
-
Vedani, A.; Dobler, M.; Lill, M.A. Combining protein modeling and 6D-QSAR. Simulating the binding of structurally diverse ligands to the estrogen receptor. J. Med. Chem. 2005, 48, 3700-3703.
-
(2005)
J. Med. Chem.
, vol.48
, pp. 3700-3703
-
-
Vedani, A.1
Dobler, M.2
Lill, M.A.3
-
36
-
-
0025158237
-
A new force field for modeling metalloproteins
-
Vedani, A.; Huhta, D.W. A new force field for modeling metalloproteins. J. Amer. Chem. Soc. 1990, 112, 4759-4767.
-
(1990)
J. Amer. Chem. Soc.
, vol.112
, pp. 4759-4767
-
-
Vedani, A.1
Huhta, D.W.2
-
37
-
-
0025339420
-
Molecular dynamics study of secondary structure motions in proteins: Application to myohemerythrin
-
Rojewska, D.; Elber, R. Molecular dynamics study of secondary structure motions in proteins: application to myohemerythrin. Proteins 1990, 7, 265-279.
-
(1990)
Proteins
, vol.7
, pp. 265-279
-
-
Rojewska, D.1
Elber, R.2
-
38
-
-
37349112664
-
Toward an atomistic understanding of the immune synapse: Large-scale molecular dynamics simulation of a membrane-embedded TCR-pMHC-CD4 complex
-
Wan, S.; Flower, D.R.; Coveney, P.V. Toward an atomistic understanding of the immune synapse: Large-scale molecular dynamics simulation of a membrane-embedded TCR-pMHC-CD4 complex. Mol. Immunol. 2008, 45, 1221-1230.
-
(2008)
Mol. Immunol.
, vol.45
, pp. 1221-1230
-
-
Wan, S.1
Flower, D.R.2
Coveney, P.V.3
-
39
-
-
64149087447
-
3-Layer-based analysis of peptide-MHC interaction: In silico prediction, peptide binding affinity and T cell activation in a relevant allergen-specific model
-
Knapp, B.; Omasits, U.; Bohle, B.; Maillere, B.; Ebner, C.; Schreiner, W.; Jahn-Schmid, B. 3-Layer-based analysis of peptide-MHC interaction: In silico prediction, peptide binding affinity and T cell activation in a relevant allergen-specific model. Mol. Immunol. 2009, 46, 1839-1844.
-
(2009)
Mol. Immunol.
, vol.46
, pp. 1839-1844
-
-
Knapp, B.1
Omasits, U.2
Bohle, B.3
Maillere, B.4
Ebner, C.5
Schreiner, W.6
Jahn-Schmid, B.7
-
40
-
-
34548205826
-
The distribution and conformation of very long-chain plant wax components in a lipid bilayer
-
Coll, E.P.; Kandt, C.; Bird, D.A.; Samuels, A.L.; Tieleman, D.P. The distribution and conformation of very long-chain plant wax components in a lipid bilayer. J. Phys. Chem. B 2007, 111, 8702-8704.
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 8702-8704
-
-
Coll, E.P.1
Kandt, C.2
Bird, D.A.3
Samuels, A.L.4
Tieleman, D.P.5
-
41
-
-
33947139278
-
Setting up and running molecular dynamics simulations of membrane proteins
-
Kandt, C.; Ash, W.L.; Tieleman, D.P. Setting up and running molecular dynamics simulations of membrane proteins. Methods 2007, 41, 475-488.
-
(2007)
Methods
, vol.41
, pp. 475-488
-
-
Kandt, C.1
Ash, W.L.2
Tieleman, D.P.3
-
42
-
-
0001008704
-
Molecular dynamics simulation of a bilayer of 200 lipids in the gel and in the liquid crystal phase
-
Heller, H.; Schaefer, M.; Schulten, K. Molecular dynamics simulation of a bilayer of 200 lipids in the gel and in the liquid crystal phase. J. Phys. Chem. 1993, 97, 8343-8360.
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 8343-8360
-
-
Heller, H.1
Schaefer, M.2
Schulten, K.3
-
43
-
-
0031577316
-
Theoretical studies of an exceptionally stable RNA tetraloop: Observation of convergence from an incorrect NMR structure to the correct one using unrestrained molecular dynamics
-
Miller, J.L.; Kollman, P.A. Theoretical studies of an exceptionally stable RNA tetraloop: Observation of convergence from an incorrect NMR structure to the correct one using unrestrained molecular dynamics. J. Mol. Biol. 1997, 270, 436-450.
-
(1997)
J. Mol. Biol.
, vol.270
, pp. 436-450
-
-
Miller, J.L.1
Kollman, P.A.2
-
44
-
-
0032542519
-
Nanosecond molecular dynamics of hybrid triplex and duplex of polycation deoxyribonucleic guanidine strands with a complimentary DNA strand
-
Luo, J.; Bruice, T.C. Nanosecond molecular dynamics of hybrid triplex and duplex of polycation deoxyribonucleic guanidine strands with a complimentary DNA strand. J. Amer. Chem. Soc. 1998, 120, 1115-1123.
-
(1998)
J. Amer. Chem. Soc.
, vol.120
, pp. 1115-1123
-
-
Luo, J.1
Bruice, T.C.2
-
45
-
-
23444454552
-
The Amber biomolecular simulation programs
-
Case, D.A.; Cheatham, T.E., III.; Darden, T.; Gohlke, H.; Luo, R.; Merz, K.M., Jr.; Onufriev, A.; Simmerling, C.; Wang, B.; Woods, R.J. The Amber biomolecular simulation programs. J. Comput. Chem. 2005, 26, 1668-1688.
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1668-1688
-
-
Case, D.A.1
Cheatham III, T.E.2
Darden, T.3
Gohlke, H.4
Luo, R.5
Merz Jr., K.M.6
Onufriev, A.7
Simmerling, C.8
Wang, B.9
Woods, R.J.10
-
46
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization and dynamics calculations
-
Brooks, B.R.; Bruccoleri, R.E.; Olafson, B.D.; States, D.J.; Swaminathan, S.; Karplus, M. CHARMM: A program for macromolecular energy, minimization and dynamics calculations. J. Comput. Chem. 1983, 4, 187-217.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
47
-
-
30444448249
-
The GROMOS software for biomolecular simulation: GROMOS05
-
Christen, M.; Hünenberger, P.H.; Bakowies, D.; Baron, R.; Bürgi, R.; Geerke, D.P.; Heinz, T.N.; Kastenholz, M.A.; Kräutler, V.; Oostenbrink, C.; et al. The GROMOS software for biomolecular simulation: GROMOS05. J. Comp. Chem. 2005, 26, 1719-1751.
-
(2005)
J. Comp. Chem.
, vol.26
, pp. 1719-1751
-
-
Christen, M.1
Hünenberger, P.H.2
Bakowies, D.3
Baron, R.4
Bürgi, R.5
Geerke, D.P.6
Heinz, T.N.7
Kastenholz, M.A.8
Kräutler, V.9
Oostenbrink, C.10
-
48
-
-
46249092554
-
GROMACS 4: Algorithms for highly efficient, load-balanced and scalable molecular simulation
-
Hess, B.; Kutzner, C.; van der Spoel, D.; Lindahl, E. GROMACS 4: Algorithms for highly efficient, load-balanced and scalable molecular simulation. J. Chem. Theory Comput. 2008, 4, 435-447.
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
van der Spoel, D.3
Lindahl, E.4
-
49
-
-
0033954256
-
The protein data bank
-
Berman, H.M.; Westbrook, J.; Feng, Z.; Gilliland, G.; Bhat, T.N.; Weissig, H.; Shindyalov, I.N.; Bourne, P.E. The protein data bank. Nucleic Acids Res. 2000, 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
50
-
-
0029878720
-
VMD: Visual molecular dynamics
-
Humphrey, W.; Dalke, A.; Schulten, K. VMD: Visual molecular dynamics. J. Mol. Graph. 1996, 14, 33-38.
-
(1996)
J. Mol. Graph.
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
53
-
-
77957238759
-
Expression of the carbohydrate recognition domain of FimH and development of a competitive binding assay
-
Rabbani, S.; Jiang, X; Schwardt, O.; Ernst, B. Expression of the carbohydrate recognition domain of FimH and development of a competitive binding assay. Anal. Biochem. 2010, 407, 188-195.
-
(2010)
Anal. Biochem.
, vol.407
, pp. 188-195
-
-
Rabbani, S.1
Jiang, X.2
Schwardt, O.3
Ernst, B.4
-
54
-
-
9744281868
-
Raptor: Combining dual-shell representation, induced-fit simulation and hydrophobicity scoring in receptor modeling: Application toward the simulation of structurally diverse ligand sets
-
Lill, M.A.; Vedani, A.; Dobler, M. Raptor: Combining dual-shell representation, induced-fit simulation and hydrophobicity scoring in receptor modeling: Application toward the simulation of structurally diverse ligand sets. J. Med. Chem. 2004, 47, 6174-6186.
-
(2004)
J. Med. Chem.
, vol.47
, pp. 6174-6186
-
-
Lill, M.A.1
Vedani, A.2
Dobler, M.3
-
56
-
-
84861613380
-
Should medicinal chemists do molecular modelling?
-
Ritchie, T.J.; McLay, I.M. Should medicinal chemists do molecular modelling? Drug Discov. Today 2012, 17, 534-537.
-
(2012)
Drug Discov. Today
, vol.17
, pp. 534-537
-
-
Ritchie, T.J.1
McLay, I.M.2
-
57
-
-
84872178720
-
-
Available online, (accessed on 12 December 2012)
-
Open VirtualToxLab. Available online: http://www.virtualtoxlab.org (accessed on 12 December 2012).
-
Open VirtualToxLab
-
-
|