-
1
-
-
67349112357
-
A decade of improvements in quantification of gene expression and internal standard selection
-
Thellin O, ElMoualij B, Heinen E, Zorzi W. 2009. A decade of improvements in quantification of gene expression and internal standard selection. Biotechnol. Adv. 27:323-333.
-
(2009)
Biotechnol. Adv.
, vol.27
, pp. 323-333
-
-
Thellin, O.1
Elmoualij, B.2
Heinen, E.3
Zorzi, W.4
-
2
-
-
1842483281
-
Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations
-
Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP. 2004. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations. Biotechnol. Lett. 26:509-515.
-
(2004)
Biotechnol. Lett.
, vol.26
, pp. 509-515
-
-
Pfaffl, M.W.1
Tichopad, A.2
Prgomet, C.3
Neuvians, T.P.4
-
3
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F. 2002. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3:0034.1-0034.11.
-
(2002)
Genome Biol.
, vol.3
-
-
Vandesompele, J.1
Preter, K.D.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
Paepe, A.D.6
Speleman, F.7
-
4
-
-
60849114472
-
A simple and rapid method for the disruption of Staphylococcus aureus, optimized for quantitative reverse transcriptase applications: application for the examination of Camembert cheese
-
Ablain W, Hallier Soulier S, Causeur D, Gautier M, Baron F. 2009. A simple and rapid method for the disruption of Staphylococcus aureus, optimized for quantitative reverse transcriptase applications: application for the examination of Camembert cheese. Dairy Sci. Technol. 89:69-81.
-
(2009)
Dairy Sci. Technol.
, vol.89
, pp. 69-81
-
-
Ablain, W.1
Hallier Soulier, S.2
Causeur, D.3
Gautier, M.4
Baron, F.5
-
5
-
-
79952898812
-
Comparison of culture-dependent and -independent methods for bacterial community monitoring during Montasio cheese manufacturing
-
Carraro L, Maifreni M, Bartolomeoli I, Martino ME, Novelli E, Frigo F, Marino M, Cardazzo B. 2011. Comparison of culture-dependent and -independent methods for bacterial community monitoring during Montasio cheese manufacturing. Res. Microbiol. 162:231-239.
-
(2011)
Res. Microbiol.
, vol.162
, pp. 231-239
-
-
Carraro, L.1
Maifreni, M.2
Bartolomeoli, I.3
Martino, M.E.4
Novelli, E.5
Frigo, F.6
Marino, M.7
Cardazzo, B.8
-
6
-
-
79251622771
-
Dynamic analysis of the Lactococcus lactis transcriptome in cheeses made from milk concentrated by ultrafiltration reveals multiple strategies of adaptation to stresses
-
Cretenet M, Laroute V, Ulvé V, Jeanson S, Nouaille S, Even S, Piot M, Girbal L, Le Loir Y, Loubiere P, Lortal S, Cocaign-Bousquet M. 2011. Dynamic analysis of the Lactococcus lactis transcriptome in cheeses made from milk concentrated by ultrafiltration reveals multiple strategies of adaptation to stresses. Appl. Environ. Microbiol. 77:247-257.
-
(2011)
Appl. Environ. Microbiol
, vol.77
, pp. 247-257
-
-
Cretenet, M.1
Laroute, V.2
Ulvé, V.3
Jeanson, S.4
Nouaille, S.5
Even, S.6
Piot, M.7
Girbal, L.8
Le Loir, Y.9
Loubiere, P.10
Lortal, S.11
Cocaign-bousquet, M.12
-
7
-
-
77649208951
-
Tool for quantification of staphylococcal enterotoxin gene expression in cheese
-
Duquenne M, Fleurot I, Aigle M, Darrigo C, Borezee-Durant E, Derzelle S, Bouix M, Deperrois-Lafarge V, Delacroix-Buchet A. 2010. Tool for quantification of staphylococcal enterotoxin gene expression in cheese. Appl. Environ. Microbiol. 76:1367-1374.
-
(2010)
Appl. Environ. Microbiol
, vol.76
, pp. 1367-1374
-
-
Duquenne, M.1
Fleurot, I.2
Aigle, M.3
Darrigo, C.4
Borezee-durant, E.5
Derzelle, S.6
Bouix, M.7
Deperrois-lafarge, V.8
Delacroix-buchet, A.9
-
8
-
-
80054922666
-
Reverse transcription quantitative PCR revealed persistency of thermophilic lactic acid bacteria metabolic activity until the end of the ripening of Emmental cheese
-
Falentin H, Henaff N, Le Bivic P, Deutsch S-M, Parayre S, Richoux R, Sohier D, Thierry A, Lortal S, Postollec F. 2012. Reverse transcription quantitative PCR revealed persistency of thermophilic lactic acid bacteria metabolic activity until the end of the ripening of Emmental cheese. Food Microbiol. 29:132-140.
-
(2012)
Food Microbiol
, vol.29
, pp. 132-140
-
-
Falentin, H.1
Henaff, N.2
Le Bivic, P.3
Deutsch, S.-M.4
Parayre, S.5
Richoux, R.6
Sohier, D.7
Thierry, A.8
Lortal, S.9
Postollec, F.10
-
9
-
-
78149464574
-
Specific metabolic activity of ripening bacteria quantified by real-time reverse transcription PCR throughout Emmental cheese manufacture
-
Falentin H, Postollec F, Parayre S, Henaff N, Le Bivic P, Richoux R, Thierry A, Sohier D. 2010. Specific metabolic activity of ripening bacteria quantified by real-time reverse transcription PCR throughout Emmental cheese manufacture. Int. J. Food Microbiol. 144:10-19.
-
(2010)
Int. J. Food Microbiol.
, vol.144
, pp. 10-19
-
-
Falentin, H.1
Postollec, F.2
Parayre, S.3
Henaff, N.4
Bivic, P.L.5
Richoux, R.6
Thierry, A.7
Sohier, D.8
-
10
-
-
79551494125
-
Identification of a tyrosine decarboxylase gene (tdcA) in Streptococcus thermophilus 1TT45 and analysis of its expression and tyramine production in milk
-
La Gioia F, Rizzotti L, Rossi F, Gardini F, Tabanelli G, Torriani S. 2011. Identification of a tyrosine decarboxylase gene (tdcA) in Streptococcus thermophilus 1TT45 and analysis of its expression and tyramine production in milk. Appl. Environ. Microbiol. 77:1140-1144.
-
(2011)
Appl. Environ. Microbiol
, vol.77
, pp. 1140-1144
-
-
Gioia, F.L.1
Rizzotti, L.2
Rossi, F.3
Gardini, F.4
Tabanelli, G.5
Torriani, S.6
-
11
-
-
84861120111
-
Growth of aerobic ripening bacteria at the cheese surface is limited by the availability of iron
-
Monnet C, Back A, Irlinger F. 2012. Growth of aerobic ripening bacteria at the cheese surface is limited by the availability of iron. Appl. Environ. Microbiol. 78:3185-3192.
-
(2012)
Appl. Environ. Microbiol
, vol.78
, pp. 3185-3192
-
-
Monnet, C.1
Back, A.2
Irlinger, F.3
-
12
-
-
84871895570
-
Application of PCR-based methods to dairy products and to non-dairy probiotic products
-
InTech, Rijeka, Croatia
-
Monnet C, Bogovic Matijasic B. 2012. Application of PCR-based methods to dairy products and to non-dairy probiotic products, p 11-51. In Hernandez-Rodriguez P, Ramirez Gomez AP (ed), Polymerase chain reaction. InTech, Rijeka, Croatia.
-
(2012)
Hernandez-Rodriguez P, Ramirez Gomez AP (ed), Polymerase chain reaction
, pp. 11-51
-
-
Monnet, C.1
Matijasic, B.B.2
-
14
-
-
79955619862
-
Quantitative analysis of histidine decarboxylase gene (hdcA) transcription and histamine production by Streptococcus thermophilus PRI60 under conditions relevant to cheese making
-
Rossi F, Gardini F, Rizzotti L, La Gioia F, Tabanelli G, Torriani S. 2011. Quantitative analysis of histidine decarboxylase gene (hdcA) transcription and histamine production by Streptococcus thermophilus PRI60 under conditions relevant to cheese making. Appl. Environ. Microbiol. 77:2817-2822.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 2817-2822
-
-
Rossi, F.1
Gardini, F.2
Rizzotti, L.3
Gioia, F.L.4
Tabanelli, G.5
Torriani, S.6
-
15
-
-
79954508234
-
Comparative transcriptome analysis of Lactococcus lactis subsp. cremoris strains under conditions simulating Cheddar cheese manufacture
-
Taïbi A, Dabour N, Lamoureux M, Roy D, LaPointe G. 2011. Comparative transcriptome analysis of Lactococcus lactis subsp. cremoris strains under conditions simulating Cheddar cheese manufacture. Int. J. Food Microbiol. 146:263-275.
-
(2011)
Int. J. Food Microbiol.
, vol.146
, pp. 263-275
-
-
Taïbi, A.1
Dabour, N.2
Lamoureux, M.3
Roy, D.4
Lapointe, G.5
-
16
-
-
80054082798
-
Characterization of Streptococcus thermophilus two-component systems: in silico analysis, functional analysis and expression of response regulator genes in pure or mixed culture with its yogurt partner, Lactobacillus delbrueckii subsp. bulgaricus
-
Thevenard B, Rasoava N, Fourcassié P, Monnet V, Boyaval P, Rul F. 2011. Characterization of Streptococcus thermophilus two-component systems: in silico analysis, functional analysis and expression of response regulator genes in pure or mixed culture with its yogurt partner, Lactobacillus delbrueckii subsp. bulgaricus. Int. J. Food Microbiol. 151: 171-181.
-
(2011)
Int. J. Food Microbiol.
, vol.151
, pp. 171-181
-
-
Thevenard, B.1
Rasoava, N.2
Fourcassié, P.3
Monnet, V.4
Boyaval, P.5
Rul, F.6
-
17
-
-
78650329056
-
Expression of nisin genes in cheese-a quantitative real-time polymerase chain reaction approach
-
Trmcic A, Monnet C, Rogelj I, Bogovic Matijasic B. 2011. Expression of nisin genes in cheese-a quantitative real-time polymerase chain reaction approach. J. Dairy Sci. 94:77-85.
-
(2011)
J. Dairy Sci.
, vol.94
, pp. 77-85
-
-
Trmcic, A.1
Monnet, C.2
Rogelj, I.3
Matijasic, B.B.4
-
18
-
-
54049087402
-
RNA extraction from cheese for analysis of in situ gene expression of Lactococcus lactis
-
Ulvé VM, Monnet C, Valence F, Fauquant J, Falentin H, Lortal S. 2008. RNA extraction from cheese for analysis of in situ gene expression of Lactococcus lactis. J. Appl. Microbiol. 105:1327-1333.
-
(2008)
J. Appl. Microbiol.
, vol.105
, pp. 1327-1333
-
-
Ulvé, V.M.1
Monnet, C.2
Valence, F.3
Fauquant, J.4
Falentin, H.5
Lortal, S.6
-
19
-
-
0024444791
-
Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA
-
Edwards U, Rogall T, Blocker H, Emde M, Bottger E. 1989. Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA. Nucleic Acids Res. 17:7843-7853.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 7843-7853
-
-
Edwards, U.1
Rogall, T.2
Blocker, H.3
Emde, M.4
Bottger, E.5
-
20
-
-
67649286245
-
Assessment of the microbial diversity at the surface of Livarot cheese using culture-dependent and independent approaches
-
Mounier J, Monnet C, Jacques N, Antoinette A, Irlinger F. 2009. Assessment of the microbial diversity at the surface of Livarot cheese using culture-dependent and independent approaches. Int. J. Food Microbiol. 133:31-37.
-
(2009)
Int. J. Food Microbiol.
, vol.133
, pp. 31-37
-
-
Mounier, J.1
Monnet, C.2
Jacques, N.3
Antoinette, A.4
Irlinger, F.5
-
21
-
-
0029933276
-
An improved sequence assembly program
-
Huang X. 1996. An improved sequence assembly program. Genomics 33:21-31.
-
(1996)
Genomics
, vol.33
, pp. 21-31
-
-
Huang, X.1
-
22
-
-
0001116362
-
Fusarium and its near relatives
-
CAB International, Wallingford, United Kingdom
-
O'Donnell K. 1993. Fusarium and its near relatives, p 225-233. In Reynolds DR, Taylor JW (ed), The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. CAB International, Wallingford, United Kingdom.
-
(1993)
Reynolds DR, Taylor JW (ed), The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics
, pp. 225-233
-
-
O'donnell, K.1
-
24
-
-
25444494901
-
Quantification strategies in real-time PCR
-
Bustin SA (ed), A-Z of quantitative PCR, International University Line, La Jolla, CA.
-
Pfaffl MW. 2004. Quantification strategies in real-time PCR, p 87-112. In Bustin SA (ed), A-Z of quantitative PCR. International University Line, La Jolla, CA.
-
(2004)
, pp. 87-112
-
-
Pfaffl, M.W.1
-
25
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl MW. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29:2002-2007.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2002-2007
-
-
Pfaffl, M.W.1
-
26
-
-
80053385809
-
Understanding the behavior of foodborne pathogens in the food chain: new information for risk assessment analysis
-
Rantsiou K, Mataragas M, Jespersen L, Cocolin L. 2011. Understanding the behavior of foodborne pathogens in the food chain: new information for risk assessment analysis. Trends Food Sci. Technol. 22:S21-S29.
-
(2011)
Trends Food Sci. Technol.
, vol.22
-
-
Rantsiou, K.1
Mataragas, M.2
Jespersen, L.3
Cocolin, L.4
-
27
-
-
33644975004
-
RNA integrity and the effect on the real-time qRT-PCR performance
-
Fleige S, Pfaffl MW. 2006. RNA integrity and the effect on the real-time qRT-PCR performance. Mol. Aspects Med. 27:126-139.
-
(2006)
Mol. Aspects Med.
, vol.27
, pp. 126-139
-
-
Fleige, S.1
Pfaffl, M.W.2
-
28
-
-
50649110928
-
Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation
-
Jahn CE, Charkowski AO, Willis DK. 2008. Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation. J. Microbiol. Methods 75:318-324.
-
(2008)
J. Microbiol. Methods
, vol.75
, pp. 318-324
-
-
Jahn, C.E.1
Charkowski, A.O.2
Willis, D.K.3
-
29
-
-
33847643776
-
Quantification of mRNA using real-time RT-PCR
-
Nolan T, Hands RE, Bustin SA. 2006. Quantification of mRNA using real-time RT-PCR. Nat. Protoc. 1:1559-1582.
-
(2006)
Nat. Protoc.
, vol.1
, pp. 1559-1582
-
-
Nolan, T.1
Hands, R.E.2
Bustin, S.A.3
|