-
1
-
-
33845249999
-
Enhancement of RNA cleavage activity of 10-23 DNAzyme by covalently introduced intercalator
-
DOI 10.1039/b611078a
-
ASANUMA, H., HAYASHI, H., ZHAO, J., LIANG, X., YAMAZAWA, A., KURAMOCHI, T., MATSUNAGA, D., AIBA, Y., KASHIDA, H., and KOMIYAMA, M. (2006). Enhancement of RNA cleavage activity of 10-23 DNAzyme by covalently introduced intercalator. Chem. Commun. 5062-5064. (Pubitemid 44866534)
-
(2006)
Chemical Communications
, Issue.48
, pp. 5062-5064
-
-
Asanuma, H.1
Hayashi, H.2
Zhao, J.3
Liang, X.4
Yamazawa, A.5
Kuramochi, T.6
Matsunaga, D.7
Aiba, Y.8
Kashida, H.9
Komiyama, M.10
-
2
-
-
44949193742
-
DNAzymes and cardiovascular disease
-
DOI 10.1038/bjp.2008.145, PII BJP2008145
-
BENSON, V.L., KHACHIGIAN, L.M., and LOWE, H.C. (2008). DNAzymes and cardiovascular disease. Br. J. Pharm. 154, 741-748. (Pubitemid 351821592)
-
(2008)
British Journal of Pharmacology
, vol.154
, Issue.4
, pp. 741-748
-
-
Benson, V.L.1
Khachigian, L.M.2
Lowe, H.C.3
-
3
-
-
35348911812
-
Brothers in arms: DNA enzymes, short interfering RNA, and the emerging wave of small-molecule nucleic acid-based gene-silencing strategies
-
DOI 10.2353/ajpath.2007.070120
-
BHINDI, R., FAHMY, R.G., LOWE, H.C., CHESTERMAN, C.N., DASS, C.R., CAIRNS, M.J., SARAVOLAC, E.G., SUN, L.Q., and KHACHIGIAN, L.M. (2007). Brothers in arms DNA enzymes, short interfering RNA, and the emerging wave of small-molecule nucleic acid-based gene-silencing strategies. Am. J. Pathol. 171, 1079-1088. (Pubitemid 47582883)
-
(2007)
American Journal of Pathology
, vol.171
, Issue.4
, pp. 1079-1088
-
-
Bhindi, R.1
Fahmy, R.G.2
Lowe, H.C.3
Chesterman, C.N.4
Dass, C.R.5
Cairns, M.J.6
Saravolac, E.G.7
Sun, L.-Q.8
Khachigian, L.M.9
-
4
-
-
65349162752
-
DNAzymes and their therapeutic possibilities
-
CHAN, C.W.S., and KHACHIGIAN, L.M. (2009). DNAzymes and their therapeutic possibilities. Inter. Med. J. 39, 249-251.
-
(2009)
Inter. Med. J
, vol.39
, pp. 249-251
-
-
Chan, C.W.S.1
Khachigian, L.M.2
-
5
-
-
0346850835
-
Structural Rearrangements of the 10-23 DNAzyme to β3 Integrin Subunit mRNA Induced by Cations and Their Relations to the Catalytic Activity
-
DOI 10.1074/jbc.M300504200
-
CIESLAK, M., SZYMANSKI, J., ADAMIAK, R.W., and CIERNIEWSKI, C.S. (2003). Structural rearrangements of the 10-23 DNAzyme to b3 integrin subunit mRNA induced by cations and their relations to the catalytic activity. J. Biol. Chem. 278, 47987-47996. (Pubitemid 37523248)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.48
, pp. 47987-47996
-
-
Cieslak, M.1
Szymanski, J.2
Adamiak, R.W.3
Cierniewski, C.S.4
-
6
-
-
39749165700
-
DNAzyme technology and cancer therapy: Cleave and let die
-
DOI 10.1158/1535-7163.MCT-07-0510
-
DASS, C.R., CHOONG, P.F.M., and KHACHIGIAN, L.M. (2008). DNAzyme technology and cancer therapy: cleave and let die. Mol. Cancer Ther. 7, 243-251. (Pubitemid 351302518)
-
(2008)
Molecular Cancer Therapeutics
, vol.7
, Issue.2
, pp. 243-251
-
-
Dass, C.R.1
Choong, P.F.M.2
Khachigian, L.M.3
-
7
-
-
0036811085
-
Cellular uptake, distribution, and stability of 10-23 deoxyribozymes
-
DASS, C.R., SARAVOLAC, E.G., LI, Y., and SUN, L.Q. (2002). Cellular uptake, distribution, and stability of 10-23 deoxyribozymes. Antisense Nucleic Acid Drug Dev. 12, 289-299. (Pubitemid 35375494)
-
(2002)
Antisense and Nucleic Acid Drug Development
, vol.12
, Issue.5
, pp. 289-299
-
-
Dass, C.R.1
Saravolac, E.G.2
Li, Y.3
Sun, L.-Q.4
-
8
-
-
79960984694
-
A novel strategy of chemical modification for rate enhancement of 10-23 DNAzyme: A combination of A9 position and 8-aza-7-deaza-2'-deoxyadenosine analogs
-
HE, J.L., ZHANG, D., WANG, Q., WEI, X., CHENG, M.S., and LIU, K.L. (2011). A novel strategy of chemical modification for rate enhancement of 10-23 DNAzyme: a combination of A9 position and 8-aza-7-deaza-2'-deoxyadenosine analogs. Org. Biomol. Chem. 9, 5728-5736.
-
(2011)
Org. Biomol. Chem
, vol.9
, pp. 5728-5736
-
-
L, H.E.J.1
Zhang, D.2
Wang, Q.3
Wei, X.4
Cheng, M.S.5
Liu, K.L.6
-
9
-
-
38049039329
-
Use of DNAzymes for site-specific analysis of ribonucleotide modifications
-
HENGSBACH, M., MEUSBURGER, M., LYKO, F., and HELM, M. (2008). Use of DNAzymes for site-specific analysis of ribonucleotide modifications. RNA, 14, 180-187.
-
(2008)
RNA
, vol.14
, pp. 180-187
-
-
Hengsbach, M.1
Meusburger, M.2
Lyko, F.3
Helm, M.4
-
10
-
-
63249131635
-
A self-cleaving DNA enzyme modified with amines guanidines and imidazoles operates independently of divalent metal cations M2 +
-
HOLLENSTEIN, M., HIPOLITO, C.J., LAM, C.H., and PERRIN, D.M. (2009). A self-cleaving DNA enzyme modified with amines, guanidines and imidazoles operates independently of divalent metal cations (M2 +). Nucleic Acids Res. 37, 1638-1649.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 1638-1649
-
-
Hollenstein, M.1
Hipolito, C.J.2
Lam, C.H.3
Perrin, D.M.4
-
11
-
-
77955659487
-
Introduction of guanidinium-modified deoxyuridine into the substrate binding regions of DNAzyme 10-23 to enhance target affinity: Implications for DNAzyme design
-
LAM, C.H., and PERRIN, D.M. (2010). Introduction of guanidinium-modified deoxyuridine into the substrate binding regions of DNAzyme 10-23 to enhance target affinity: implications for DNAzyme design. Bioorg. Med. Chem. Lett. 20, 5119-5122.
-
(2010)
Bioorg. Med. Chem. Lett
, vol.20
, pp. 5119-5122
-
-
Lam, C.H.1
Perrin, D.M.2
-
12
-
-
67349198163
-
Direct measurement of the ionization state of an essential guanine in the hairpin ribozyme
-
LIU, L., COTTRELL, J.W., SCOTT, L.G., and FEDOR, M.J. (2009). Direct measurement of the ionization state of an essential guanine in the hairpin ribozyme. Nat. Chem. Biol. 5, 351-357.
-
(2009)
Nat. Chem. Biol
, vol.5
, pp. 351-357
-
-
Liu, L.1
Cottrell, J.W.2
Scott, L.G.3
Fedor, M.J.4
-
13
-
-
52949151200
-
Effect of RP and SP phosphorothioate substitution at the scissile site on the cleavage activity of deoxyribozyme 10-23
-
NAWROT, B., WIDERA, K., SOBCZAK, M., WOJCIK, M., and STEC, W.J. (2008). Effect of RP and SP phosphorothioate substitution at the scissile site on the cleavage activity of deoxyribozyme 10-23. Curr. Org. Chem. 12, 1004-1009.
-
(2008)
Curr. Org. Chem̀
, vol.12
, pp. 1004-1009
-
-
Nawrot, B.1
Widera, K.2
Sobczak, M.3
Wojcik, M.4
Stec, W.J.5
-
14
-
-
33846811414
-
Mapping of the functional phosphate groups in the catalytic core of deoxyribozyme 10-23
-
DOI 10.1111/j.1742-4658.2007.05655.x
-
NAWROT, B., WIDERA, K., WOJCIK, M., REBOWSKA, B., NOWAK, G., and STEC, W.J. (2007). Mapping of the functional phosphate groups in the catalytic core of deoxyribozyme 10-23. FEBS J. 274, 1062-1072. (Pubitemid 46204424)
-
(2007)
FEBS Journal
, vol.274
, Issue.4
, pp. 1062-1072
-
-
Nawrot, B.1
Widera, K.2
Wojcik, M.3
Rebowska, B.4
Nowak, G.5
Stec, W.J.6
-
15
-
-
0037465559
-
2+-dependent deoxyribozyme in relation to its RNA cleavage function
-
DOI 10.1021/bi020364z
-
OKUMOTO, Y., TANABE, Y., and SUGIMOTO, N. (2003). Factors that contribute to efficient catalytic activity of a small Ca2 +-dependent deoxyribozyme in relation to its RNA cleavage function. Biochemistry 42, 2158-2165. (Pubitemid 36258690)
-
(2003)
Biochemistry
, vol.42
, Issue.7
, pp. 2158-2165
-
-
Okumoto, Y.1
Tanabe, Y.2
Sugimoto, N.3
-
16
-
-
0037133526
-
a perturbation in genomic Hepatitis Delta Virus ribozyme catalysis evidenced by nucleotide analogue interference mapping
-
DOI 10.1021/bi011816v
-
OYELERE, A.K., KARDON, J.R., and STROBEL, S.A. (2002). pKa perturbation in genomic hepatitis Delta Virus ribozyme catalysis evidenced by nucleotide analogue interference mapping. Biochemistry 41, 3667-3675. (Pubitemid 34224679)
-
(2002)
Biochemistry
, vol.41
, Issue.11
, pp. 3667-3675
-
-
Oyelere, A.K.1
Kardon, J.R.2
Strobel, S.A.3
-
17
-
-
77955419129
-
10-23 DNAzyme modified with (2¢R)-and (2¢S)-2¢-deoxy- 2¢-C-methyluridine in the catalytic core
-
ROBALDO, L., MONTSERRAT, J.M., and IRIBARREN, A.M. (2010). 10-23 DNAzyme modified with (2¢R)-and (2¢S)-2¢-deoxy-2¢-C-methyluridine in the catalytic core. Bioorg. Med. Chem. Lett. 20, 4367-4370.
-
(2010)
Bioorg. Med. Chem. Lett
, vol.20
, pp. 4367-4370
-
-
Robaldo, L.1
Montserrat, J.M.2
Iribarren, A.M.3
-
19
-
-
0032558463
-
Mechanism and utility of an RNA-cleaving DNA enzyme
-
DOI 10.1021/bi9812221
-
SANTORO, S.W., and JOYCE,G.F. (1998).Mechanismand utility of an RNA-cleaving DNA enzyme. Biochemistry 37, 13330-13342. (Pubitemid 28449578)
-
(1998)
Biochemistry
, vol.37
, Issue.38
, pp. 13330-13342
-
-
Santoro, S.W.1
Joyce, G.F.2
-
20
-
-
2342523304
-
Gaining target access for deoxyribozymes
-
DOI 10.1016/j.jmb.2004.03.064, PII S002228360400381X
-
SCHUBERT, S., FÜ RSTE, J.P., WERK, D., GRUNERT, H.P., ZEICHHARDT, H., ERDMANN, V.A., and KURRECK, J. (2004). Gaining target access for deoxyribozymes. J. Mol. Biol. 339, 355-363. (Pubitemid 38596954)
-
(2004)
Journal of Molecular Biology
, vol.339
, Issue.2
, pp. 355-363
-
-
Schubert, S.1
Furste, J.P.2
Werk, D.3
Grunert, H.-P.4
Zeichhardt, H.5
Erdmann, V.A.6
Kurreck, J.7
-
21
-
-
0344442416
-
RNA cleaving '10-23' DNAzymes with enhanced stability and activity
-
DOI 10.1093/nar/gkg791
-
SCHUBERT, S., GÜ L, D.C., GRUNERT, H.P., ZEICHHARDT, H., ERDMANN, V.A., and KURRECK, J. (2003). RNA cleaving '10-23' DNAzymes with enhanced stability and activity. Nucleic Acids Res. 31, 5982-5992. (Pubitemid 37442324)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.20
, pp. 5982-5992
-
-
Schubert, S.1
Gul, D.C.2
Grunert, H.-P.3
Zeichhardt, H.4
Erdmann, V.A.5
Kurreck, J.6
-
22
-
-
0032720771
-
Oligonucleotides containing 7-deazaadenines: The influence of the 7-substituent chain length and charge on the duplex stability
-
SEELA, F., and ZULAUF, M. (1999). Oligonucleotides containing 7-deazaadenines: the influence of the 7-substituent chain length and charge on the duplex stability. Helv. Chim. Acta 82, 1878-1898.
-
(1999)
Helv. Chim. Acta
, vol.82
, pp. 1878-1898
-
-
Seela, F.1
Zulauf, M.2
-
23
-
-
77952561689
-
RNA-cleaving 10-23 deoxyribozyme with a single amino acid-like functionality operates without metal ion cofactors
-
SMUGA, D., MAJCHRZAK, K., SOCHACKA, E., and NAWROT, B. (2010). RNA-cleaving 10-23 deoxyribozyme with a single amino acid-like functionality operates without metal ion cofactors. New J. Chem., 34, 934-948.
-
(2010)
New J. Chem
, vol.34
, pp. 934-948
-
-
Smuga, D.1
Majchrzak, K.2
Sochacka, E.3
Nawrot, B.4
-
24
-
-
25444472329
-
Use of deoxyribozymes for gene knockdown
-
SUN, L.Q. (2005). Use of deoxyribozymes for gene knockdown. Med. Chem. Rev. 2, 81-87.
-
(2005)
Med. Chem. Rev
, vol.2
, pp. 81-87
-
-
Sun, L.Q.1
-
25
-
-
67849104696
-
Investigation of the catalytic mechanism of a synthetic DNAzyme with protein-like functionality: An RNaseA mimic?
-
THOMAS, J.M., YOON, J.K., and PERRIN, D.M. (2009). Investigation of the catalytic mechanism of a synthetic DNAzyme with protein-like functionality: an RNaseA mimic? J. Am. Chem. Soc. 131, 5648-5658.
-
(2009)
J. Am. Chem. Soc
, vol.131
, pp. 5648-5658
-
-
Thomas, J.M.1
Yoon, J.K.2
Perrin, D.M.3
-
26
-
-
0037145999
-
LNAzymes: Incorporation of LNA-type monomers into DNAzymes markedly increases RNA cleavage
-
DOI 10.1021/ja0276220
-
VESTER, B., LUNDBERG, L.B., SØRENSEN, M.D., BABU, B.R., DOUTHWAITE, S., and WENGEL, J. (2002). LNAzymes: incorporation of LNA-type monomers into DNAzymes markedly increases RNA cleavage. J. Am. Chem. Soc. 124, 13682-13683. (Pubitemid 35378975)
-
(2002)
Journal of the American Chemical Society
, vol.124
, Issue.46
, pp. 13682-13683
-
-
Vester, B.1
Lundberg, L.B.2
Sorensen, M.D.3
Babu, B.R.4
Douthwaite, S.5
Wengel, J.6
-
27
-
-
77956133904
-
Probing the function of nucleotides in the catalytic cores of the 8-17 and 10-23 DNAzymes by abasic nucleotide and C3 spacer substitutions
-
WANG, B., CAO, L., CHIUMAN, W., LI, Y., and XI, Z. (2010). Probing the function of nucleotides in the catalytic cores of the 8-17 and 10-23 DNAzymes by abasic nucleotide and C3 spacer substitutions. Biochemistry 49, 7553-7562.
-
(2010)
Biochemistry
, vol.49
, pp. 7553-7562
-
-
Wang, B.1
Cao, L.2
Chiuman, W.3
Y, L.I.4
Z, X.I.5
-
28
-
-
0141648523
-
LNA and α-L-LNA: Towards therapeutic applications
-
DOI 10.1081/NCN-120021963
-
WENGEL, J., VESTER, B., LUNDBERG, L.B., DOUTHWAITE, S., SØRENSEN, M.D., BABU, B.R., GAIT, M.J., ARZUMANOV, A., PETERSEN, M., and NIELSEN, J.T. (2003). LNA and a-L-LNA: towards therapeutic applications. Nucleosides Nucleotides Nucleic Acids 22, 601-604. (Pubitemid 37139215)
-
(2003)
Nucleosides, Nucleotides and Nucleic Acids
, vol.22
, Issue.5-8
, pp. 601-604
-
-
Wengel, J.1
Vester, B.2
Lundberg, L.B.3
Douthwaite, S.4
Sorensen, M.D.5
Babu, B.R.6
Gait, M.J.7
Arzumanov, A.8
Petersen, M.9
Nielsen, J.T.10
-
29
-
-
0037175009
-
Sequence requirements in the catalytic core of the "10-23" DNA enzyme
-
DOI 10.1074/jbc.M207094200
-
ZABOROWSKA, Z., FÜ RSTE, J.P., ERDMANN, V.A., and KURRECK, J. (2002). Sequence requirements in the catalytic core of the "10-23" DNA enzyme. J. Biol. Chem. 277, 40617-40622. (Pubitemid 35215642)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.43
, pp. 40617-40622
-
-
Zaborowska, Z.1
Furste, J.P.2
Erdmann, V.A.3
Kurreck, J.4
-
30
-
-
11844276654
-
Deletion analysis in the catalytic region of the 10-23 DNA enzyme
-
DOI 10.1016/j.febslet.2004.12.008, PII S0014579304015339
-
ZABOROWSKA, Z., SCHUBERT, S., KURRECK, J., and ERDMANN, V.A. (2005). Deletion analysis in the catalytic region of the 10-23 DNA enzyme. FEBS Lett. 579, 554-558. (Pubitemid 40092443)
-
(2005)
FEBS Letters
, vol.579
, Issue.2
, pp. 554-558
-
-
Zaborowska, Z.1
Schubert, S.2
Kurreck, J.3
Erdmann, V.A.4
-
31
-
-
0036792125
-
Angiogenic inhibition mediated by a DNAzyme that targets vascular endothelial growth factor receptor 2
-
ZHANG, L., GASPER, W.J., STASS, S.A., IOFFE, O.B., DAVIS, M.A., and MIXSON, A.J. (2002). Angiogenic inhibition mediated by a DNAzyme that targets vascular endothelial growth factor receptor 2. Cancer Res. 62, 5463-5469.
-
(2002)
Cancer Res
, vol.62
, pp. 5463-5469
-
-
Zhang, L.1
Gasper, W.J.2
Stass, S.A.3
Ioffe, O.B.4
Davis, M.A.5
Mixson, A.J.6
-
32
-
-
75149174799
-
Hydroxyl-functionalized DNA: An efficient orthogonal protecting strategy and duplex stability
-
ZHANG, D., XU, L., WEI, X., LI, Y.M., HE, J.L., and LIU, K.L. (2009). Hydroxyl-functionalized DNA: an efficient orthogonal protecting strategy and duplex stability. Nucleosides Nucleotides Nucleic Acids 28, 924-942.
-
(2009)
Nucleosides Nucleotides Nucleic Acids
, vol.28
, pp. 924-942
-
-
Zhang, D.1
L, X.U.2
Wei, X.3
M, L.I.Y.4
L, H.E.J.5
Liu, K.L.6
|